1
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Wang S, Min X, Ding X. The dominoes of features: Dynamic sequential refinement of working memory representations. Cognition 2025; 260:106133. [PMID: 40184950 DOI: 10.1016/j.cognition.2025.106133] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2024] [Revised: 01/16/2025] [Accepted: 03/27/2025] [Indexed: 04/07/2025]
Abstract
Despite the adaptative nature of working memory (WM) refinement (e.g. repulsion), a fundamental question remains unaddressed: what constitutes the unit of WM refinement? Specifically, does the refinement process apply to the entire object (object-based), specific features (feature-based), or potentially involve other mechanisms? Utilizing dual-feature objects and the continuous memory task, we examined whether the repulsion distortion induced in one feature (the trigger feature) could be transmitted to other features (the dependent feature) of the same object. Across one preliminary experiment and five formal experiments, we supported that the WM refinement is neither strictly object-based nor feature-based, but occurs dynamically and sequentially across distinct features. Specifically, the repulsion induced by the trigger feature was transmitted to the dependent feature only during extended maintenance periods, not during short maintenance. Our findings supported the dynamic sequential refinement of WM: refinement induced by a trigger feature could extend to other features, but this transmission is time-consuming.
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Affiliation(s)
- Shengyuan Wang
- Department of Psychology, Guangdong Provincial Key Laboratory of Social Cognitive Neuroscience and Mental Health, Sun Yat-sen University, Guangzhou, China
| | - Xiaoying Min
- Department of Psychology, Guangdong Provincial Key Laboratory of Social Cognitive Neuroscience and Mental Health, Sun Yat-sen University, Guangzhou, China
| | - Xiaowei Ding
- Department of Psychology, Guangdong Provincial Key Laboratory of Social Cognitive Neuroscience and Mental Health, Sun Yat-sen University, Guangzhou, China.
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2
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Cheung KYM, Nair A, Li LY, Shapiro MG, Anderson DJ. Population coding of predator imminence in the hypothalamus. Neuron 2025; 113:1259-1275.e4. [PMID: 40086431 PMCID: PMC12064081 DOI: 10.1016/j.neuron.2025.02.003] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/25/2024] [Revised: 10/16/2024] [Accepted: 02/04/2025] [Indexed: 03/16/2025]
Abstract
Hypothalamic VMHdmSF1 neurons are activated by predator cues and are necessary and sufficient for instinctive defensive responses. However, such data do not distinguish which features of a predator encounter are encoded by VMHdmSF1 neural activity. To address this issue, we imaged VMHdmSF1 neurons at single-cell resolution in freely behaving mice exposed to a natural predator in varying contexts. Our results reveal that VMHdmSF1 neurons do not encode different defensive behaviors but rather represent predator identity and multiple predator-evoked internal states, including threat-evoked fear/anxiety, arousal or neophobia, predator imminence, and safety. Notably, threat and safety are encoded bi-directionally by anti-correlated subpopulations. Strikingly, individual differences in predator defensiveness are correlated with individual differences in VMHdmSF1 response dynamics. Thus, different threat-related internal state variables are encoded by distinct neuronal subpopulations within a genetically defined, anatomically restricted hypothalamic cell class.
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Affiliation(s)
- Kathy Y M Cheung
- Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, USA; Tianqiao and Chrissy Chen Institute for Neuroscience Caltech, Pasadena, CA, USA
| | - Aditya Nair
- Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, USA; Tianqiao and Chrissy Chen Institute for Neuroscience Caltech, Pasadena, CA, USA
| | - Ling-Yun Li
- Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, USA; Tianqiao and Chrissy Chen Institute for Neuroscience Caltech, Pasadena, CA, USA
| | - Mikhail G Shapiro
- Howard Hughes Medical Institute, Chevy Chase, MD, USA; Andrew and Peggy Cherng Department of Medical Engineering, California Institute of Technology, Pasadena, CA, USA; Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, CA, USA
| | - David J Anderson
- Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, USA; Tianqiao and Chrissy Chen Institute for Neuroscience Caltech, Pasadena, CA, USA; Howard Hughes Medical Institute, Chevy Chase, MD, USA.
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3
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Oderbolz C, Poeppel D, Meyer M. Asymmetric Sampling in Time: Evidence and perspectives. Neurosci Biobehav Rev 2025; 171:106082. [PMID: 40010659 DOI: 10.1016/j.neubiorev.2025.106082] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/28/2024] [Revised: 02/15/2025] [Accepted: 02/21/2025] [Indexed: 02/28/2025]
Abstract
Auditory and speech signals are undisputedly processed in both left and right hemispheres, but this bilateral allocation is likely unequal. The Asymmetric Sampling in Time (AST) hypothesis proposed a division of labor that has its neuroanatomical basis in the distribution of neuronal ensembles with differing temporal integration constants: left auditory areas house a larger proportion of ensembles with shorter temporal integration windows (tens of milliseconds), suited to process rapidly changing signals; right auditory areas host a larger proportion with longer time constants (∼150-300 ms), ideal for slowly changing signals. Here we evaluate the large body of findings that clarifies this relationship between auditory temporal structure and functional lateralization. In this reappraisal, we unpack whether this relationship is influenced by stimulus type (speech/nonspeech), stimulus temporal extent (long/short), task engagement (high/low), or (imaging) modality (hemodynamic/electrophysiology/behavior). We find that the right hemisphere displays a clear preference for slowly changing signals whereas the left-hemispheric preference for rapidly changing signals is highly dependent on the experimental design. We consider neuroanatomical properties potentially linked to functional lateralization, contextualize the results in an evolutionary perspective, and highlight future directions.
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Affiliation(s)
- Chantal Oderbolz
- Institute for the Interdisciplinary Study of Language Evolution, University of Zurich, Zurich, Switzerland; Department of Neuroscience, Georgetown University Medical Center, Washington D.C., USA.
| | - David Poeppel
- Department of Psychology, New York University, New York, NY, USA
| | - Martin Meyer
- Institute for the Interdisciplinary Study of Language Evolution, University of Zurich, Zurich, Switzerland
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4
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Du C, Sun Y, Wang J, Zhang Q, Zeng Y. Synapses mediate the effects of different types of stress on working memory: a brain-inspired spiking neural network study. Front Cell Neurosci 2025; 19:1534839. [PMID: 40177582 PMCID: PMC11961926 DOI: 10.3389/fncel.2025.1534839] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/28/2024] [Accepted: 02/25/2025] [Indexed: 04/05/2025] Open
Abstract
Acute stress results from sudden short-term events, and individuals need to quickly adjust their physiological and psychological to re-establish balance. Chronic stress, on the other hand, results in long-term physiological and psychological burdens due to the continued existence of stressors, making it difficult for individuals to recover and prone to pathological symptoms. Both types of stress can affect working memory and change cognitive function. In this study, we explored the impact of acute and chronic stress on synaptic modulation using a biologically inspired, data-driven rodent prefrontal neural network model. The model consists of a specific number of excitatory and inhibitory neurons that are connected through AMPA, NMDA, and GABA synapses. The study used a short-term recall to simulate working memory tasks and assess the ability of neuronal populations to maintain information over time. The results showed that acute stress can enhance working memory information retention by enhancing AMPA and NMDA synaptic currents. In contrast, chronic stress reduces dendritic spine density and weakens the regulatory effect of GABA currents on working memory tasks. In addition, this structural damage can be complemented by strong connections between excitatory neurons with the same selectivity. These findings provide a reference scheme for understanding the neural basis of working memory under different stress conditions.
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Affiliation(s)
- Chengcheng Du
- Brain-inspired Cognitive Intelligence Lab, Institute of Automation, Chinese Academy of Sciences, Beijing, China
- School of Future Technology, University of Chinese Academy of Sciences, Beijing, China
- Center for Long-term Artificial Intelligence, Beijing, China
| | - Yinqian Sun
- Brain-inspired Cognitive Intelligence Lab, Institute of Automation, Chinese Academy of Sciences, Beijing, China
- School of Future Technology, University of Chinese Academy of Sciences, Beijing, China
- Center for Long-term Artificial Intelligence, Beijing, China
| | - Jihang Wang
- Brain-inspired Cognitive Intelligence Lab, Institute of Automation, Chinese Academy of Sciences, Beijing, China
- School of Future Technology, University of Chinese Academy of Sciences, Beijing, China
- Center for Long-term Artificial Intelligence, Beijing, China
| | - Qian Zhang
- Brain-inspired Cognitive Intelligence Lab, Institute of Automation, Chinese Academy of Sciences, Beijing, China
- Center for Long-term Artificial Intelligence, Beijing, China
- School of Artificial Intelligence, University of Chinese Academy of Sciences, Beijing, China
| | - Yi Zeng
- Brain-inspired Cognitive Intelligence Lab, Institute of Automation, Chinese Academy of Sciences, Beijing, China
- Center for Long-term Artificial Intelligence, Beijing, China
- School of Artificial Intelligence, University of Chinese Academy of Sciences, Beijing, China
- Center for Excellence in Brain Science and Intelligence Technology, Chinese Academy of Sciences, Shanghai, China
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5
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Ianni GR, Vázquez Y, Rouse AG, Schieber MH, Prut Y, Freiwald WA. Facial gestures are enacted via a cortical hierarchy of dynamic and stable codes. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2025:2025.03.03.641159. [PMID: 40161717 PMCID: PMC11952350 DOI: 10.1101/2025.03.03.641159] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/02/2025]
Abstract
Successful communication requires the generation and perception of a shared set of signals. Facial gestures are one fundamental set of communicative behaviors in primates, generated through the dynamic arrangement of dozens of fine muscles. While much progress has been made uncovering the neural mechanisms of face perception, little is known about those controlling facial gesture production. Commensurate with the importance of facial gestures in daily social life, anatomical work has shown that facial muscles are under direct control from multiple cortical regions, including primary and premotor in lateral frontal cortex, and cingulate in medial frontal cortex. Furthermore, neuropsychological evidence from focal lesion patients has suggested that lateral cortex controls voluntary movements, and medial emotional expressions. Here we show that lateral and medial cortical face motor regions encode both types of gestures. They do so through unique temporal activity patterns, distinguishable well-prior to movement onset. During gesture production, cortical regions encoded facial kinematics in a context-dependent manner. Our results show how cortical regions projecting in parallel downstream, but each situated at a different level of a posterior-anterior hierarchy form a continuum of gesture coding from dynamic to temporally stable, in order to produce context-related, coherent motor outputs during social communication.
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Affan RO, Bright IM, Pemberton LN, Cruzado NA, Scott BB, Howard MW. Ramping dynamics in the frontal cortex unfold over multiple timescales during motor planning. J Neurophysiol 2025; 133:625-637. [PMID: 39819250 DOI: 10.1152/jn.00234.2024] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/03/2024] [Revised: 08/05/2024] [Accepted: 01/08/2025] [Indexed: 01/19/2025] Open
Abstract
Plans are formulated and refined throughout the period leading up to their execution, ensuring that the appropriate behaviors are enacted at the appropriate times. Although existing evidence suggests that memory circuits convey the passage of time through diverse neuronal responses, it remains unclear whether the neural circuits involved in planning exhibit analogous temporal dynamics. Using publicly available data, we analyzed how activity in the mouse frontal motor cortex evolves during motor planning. Individual neurons exhibited diverse ramping activity throughout a delay interval that preceded a planned movement. The collective activity of these neurons was useful for making temporal predictions that became increasingly precise as the movement time approached. This temporal diversity gave rise to a spectrum of encoding patterns, ranging from stable to dynamic representations of the upcoming movement. Our results indicate that ramping activity unfolds over multiple timescales during motor planning, suggesting a shared mechanism in the brain for processing temporal information related to both memories from the past and plans for the future. NEW & NOTEWORTHY Neuronal responses in the cortex are diverse, but the nature and functional consequences of this diversity remain ambiguous. We identified a specific pattern of temporal heterogeneity in the mouse frontal motor cortex, whereby the firing of different neurons ramps up at varying speeds before the execution of a movement. Our decoding analyses reveal that this heterogeneity in ramping dynamics enables precise and reliable encoding of movement plans and time across various timescales.
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Affiliation(s)
- Rifqi O Affan
- Graduate Program in Neuroscience, Boston University, Boston, Massachusetts, United States
| | - Ian M Bright
- Department of Psychological and Brain Sciences, Boston University, Boston, Massachusetts, United States
| | - Luke N Pemberton
- Department of Psychological and Brain Sciences, Boston University, Boston, Massachusetts, United States
| | - Nathanael A Cruzado
- Department of Psychological and Brain Sciences, Boston University, Boston, Massachusetts, United States
| | - Benjamin B Scott
- Department of Psychological and Brain Sciences, Boston University, Boston, Massachusetts, United States
| | - Marc W Howard
- Department of Psychological and Brain Sciences, Boston University, Boston, Massachusetts, United States
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Soldado-Magraner J, Minai Y, Yu BM, Smith MA. Robustness of working memory to prefrontal cortex microstimulation. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2025:2025.01.14.632986. [PMID: 39868186 PMCID: PMC11761800 DOI: 10.1101/2025.01.14.632986] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Indexed: 01/28/2025]
Abstract
Delay period activity in the dorso-lateral prefrontal cortex (dlPFC) has been linked to the maintenance and control of sensory information in working memory. The stability of working memory related signals found in such delay period activity is believed to support robust memory-guided behavior during sensory perturbations, such as distractors. Here, we directly probed dlPFC's delay period activity with a diverse set of activity perturbations, and measured their consequences on neural activity and behavior. We applied patterned microstimulation to the dlPFC of monkeys implanted with multi-electrode arrays by electrically stimulating different electrodes in the array while the monkeys performed a memory-guided saccade task. We found that the microstimulation perturbations affected spatial working memory-related signals in individual dlPFC neurons. However, task performance remained largely unaffected. These apparently contradictory observations could be understood by examining different dimensions of the dlPFC population activity. In dimensions where working memory related signals naturally evolved over time, microstimulation impacted neural activity. In contrast, in dimensions containing working memory related signals that were stable over time, microstimulation minimally impacted neural activity. This dissociation explained how working memory-related information could be stably maintained in dlPFC despite the activity changes induced by microstimulation. Thus, working memory processes are robust to a variety of activity perturbations in the dlPFC.
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Affiliation(s)
- Joana Soldado-Magraner
- Department of Electrical and Computer Engineering, Carnegie Mellon University, Pittsburgh 15213, Pennsylvania, USA
- Center for the Neural Basis of Cognition, Carnegie Mellon University and University of Pittsburgh, Pittsburgh 15213, Pennsylvania, USA
- Neuroscience Institute, Carnegie Mellon University, Pittsburgh 15213, Pennsylvania, USA
| | - Yuki Minai
- Machine Learning Department, Carnegie Mellon University, Pittsburgh 15213, Pennsylvania, USA
- Center for the Neural Basis of Cognition, Carnegie Mellon University and University of Pittsburgh, Pittsburgh 15213, Pennsylvania, USA
- Neuroscience Institute, Carnegie Mellon University, Pittsburgh 15213, Pennsylvania, USA
| | - Byron M. Yu
- Department of Electrical and Computer Engineering, Carnegie Mellon University, Pittsburgh 15213, Pennsylvania, USA
- Department of Biomedical Engineering, Carnegie Mellon University, Pittsburgh 15213, Pennsylvania, USA
- Center for the Neural Basis of Cognition, Carnegie Mellon University and University of Pittsburgh, Pittsburgh 15213, Pennsylvania, USA
- Neuroscience Institute, Carnegie Mellon University, Pittsburgh 15213, Pennsylvania, USA
| | - Matthew A. Smith
- Department of Biomedical Engineering, Carnegie Mellon University, Pittsburgh 15213, Pennsylvania, USA
- Center for the Neural Basis of Cognition, Carnegie Mellon University and University of Pittsburgh, Pittsburgh 15213, Pennsylvania, USA
- Neuroscience Institute, Carnegie Mellon University, Pittsburgh 15213, Pennsylvania, USA
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8
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Pereira-Obilinovic U, Froudist-Walsh S, Wang XJ. Cognitive network interactions through communication subspaces in large-scale models of the neocortex. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.11.01.621513. [PMID: 39554020 PMCID: PMC11566003 DOI: 10.1101/2024.11.01.621513] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Indexed: 11/19/2024]
Abstract
Neocortex-wide neural activity is organized into distinct networks of areas engaged in different cognitive processes. To elucidate the underlying mechanism of flexible network reconfiguration, we developed connectivity-constrained macaque and human whole-cortex models. In our model, within-area connectivity consists of a mixture of symmetric, asymmetric, and random motifs that give rise to stable (attractor) or transient (sequential) heterogeneous dynamics. Assuming sparse low-rank plus random inter-areal connectivity constrained by cognitive networks' activation maps, we show that our model captures key aspects of the cognitive networks' dynamics and interactions observed experimentally. In particular, the anti-correlation between the default mode network and the dorsal attention network. Communication between networks is shaped by the alignment of long-range communication subspaces with local connectivity motifs and is switchable in a bottom-up salience-dependent routing mechanism. Furthermore, the frontoparietal multiple-demand network displays a coexistence of stable and dynamic coding, suitable for top-down cognitive control. Our work provides a theoretical framework for understanding the dynamic routing in the cortical networks during cognition.
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Affiliation(s)
- Ulises Pereira-Obilinovic
- Center for Neural Science, New York University, New York, NY, USA
- The Allen Institute for Neural Dynamics, Seattle, WA, USA
| | - Sean Froudist-Walsh
- Bristol Computational Neuroscience Unit, School of Engineering Mathematics and Technology, University of Bristol, Bristol, UK
| | - Xiao-Jing Wang
- Center for Neural Science, New York University, New York, NY, USA
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Courtney SM, Hinault T. Anatomical Connectivity Constrains Dynamic Functional Connectivity among Neural Systems: Implications for Cognition and Behavior. J Cogn Neurosci 2024; 36:2712-2724. [PMID: 38940735 DOI: 10.1162/jocn_a_02205] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/29/2024]
Abstract
Leslie Ungerleider had a tremendous impact across many different areas of cognitive neuroscience. Her ideas and her approach, as well as her findings, will continue to impact the field for generations to come. One of the most impactful aspects of her approach was her focus on the ways that anatomical connections constrain functional communications among brain regions. Furthermore, she emphasized that changes in these functional communications, whether from lesions to the anatomical connections or temporary modulations of the efficacy of information transmission resulting from selective attention, have consequences for cognition and behavior. By necessity, this short review cannot cover the vast amount of research that contributed to or benefited from Leslie's work. Rather, we focus on one line of research that grew directly from some of Leslie's early work and her mentoring on these important concepts. This research and the many other lines of research that arose from these same origins has helped develop our understanding of the visual system, and cognitive systems more generally, as collections of highly organized, specialized, dynamic, and interacting subsystems.
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10
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Goldberg A, Rosario I, Power J, Horga G, Wengler K. Strategies for motion- and respiration-robust estimation of fMRI intrinsic neural timescales. IMAGING NEUROSCIENCE (CAMBRIDGE, MASS.) 2024; 2:10.1162/imag_a_00326. [PMID: 40400776 PMCID: PMC12094611 DOI: 10.1162/imag_a_00326] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Indexed: 05/25/2025]
Abstract
Intrinsic neural timescales (INT) reflect the time window of neural integration within a brain region and can be measured via resting-state functional magnetic resonance imaging (rs-fMRI). Despite the potential relevance of INT to cognition, brain organization, and neuropsychiatric illness, the influences of physiological artifacts on rs-fMRI INT have not been systematically considered. Two artifacts, head motion and respiration, pose serious issues in rs-fMRI studies. Here, we described their impact on INT estimation and tested the ability of two denoising strategies for mitigating these artifacts, high-motion frame censoring and global signal regression (GSR). We used a subset of the Human Connectome Project Young Adult (HCP-YA) dataset with runs annotated for breathing patterns (Lynch et al., 2020) and at least one "clean" (reference) run that had minimal head motion and no respiration artifacts; other runs from the same participants ( n = 46 ) were labeled as "non-clean." We found that non-clean runs exhibited brain-wide increases in INT compared with their respective clean runs and that the magnitude of error in INT between non-clean and clean runs correlated with the amount of head motion. Importantly, effect sizes were comparable with INT effects reported in the clinical literature. GSR and high-motion frame censoring improved the similarity between INT maps from non-clean runs and their respective clean run. Using a pseudo-random frame-censoring approach, we uncovered a relationship between the number of censored frames and both the mean INT and mean error, suggesting that frame censoring itself biases INT estimation. A group-level correction procedure reduced this bias and improved similarity between non-clean runs and their respective clean run. Based on our findings, we offer recommendations for rs-fMRI INT studies, which include implementing GSR and high-motion frame censoring with Lomb-Scargle interpolation of censored frames, and performing group-level correction of the bias introduced by frame censoring.
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Affiliation(s)
- Andrew Goldberg
- New York State Psychiatric Institute, New York, NY, United States
| | - Isabella Rosario
- New York State Psychiatric Institute, New York, NY, United States
| | - Jonathan Power
- Department of Psychiatry, Weill Cornell Medicine, New York, NY, United States
| | - Guillermo Horga
- New York State Psychiatric Institute, New York, NY, United States
- Department of Psychiatry, Columbia University, New York, NY, United States
| | - Kenneth Wengler
- New York State Psychiatric Institute, New York, NY, United States
- Department of Psychiatry, Columbia University, New York, NY, United States
- Department of Psychiatry, Icahn School of Medicine at Mount Sinai, New York, NY, United States
- Department of Diagnostic, Molecular and Interventional Radiology, Icahn School of Medicine at Mount Sinai, New York, NY, United States
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11
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Mountoufaris G, Nair A, Yang B, Kim DW, Vinograd A, Kim S, Linderman SW, Anderson DJ. A line attractor encoding a persistent internal state requires neuropeptide signaling. Cell 2024; 187:5998-6015.e18. [PMID: 39191257 PMCID: PMC11490375 DOI: 10.1016/j.cell.2024.08.015] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2023] [Revised: 06/23/2024] [Accepted: 08/07/2024] [Indexed: 08/29/2024]
Abstract
Internal states drive survival behaviors, but their neural implementation is poorly understood. Recently, we identified a line attractor in the ventromedial hypothalamus (VMH) that represents a state of aggressiveness. Line attractors can be implemented by recurrent connectivity or neuromodulatory signaling, but evidence for the latter is scant. Here, we demonstrate that neuropeptidergic signaling is necessary for line attractor dynamics in this system by using cell-type-specific CRISPR-Cas9-based gene editing combined with single-cell calcium imaging. Co-disruption of receptors for oxytocin and vasopressin in adult VMH Esr1+ neurons that control aggression diminished attack, reduced persistent neural activity, and eliminated line attractor dynamics while only slightly reducing overall neural activity and sex- or behavior-specific tuning. These data identify a requisite role for neuropeptidergic signaling in implementing a behaviorally relevant line attractor in mammals. Our approach should facilitate mechanistic studies in neuroscience that bridge different levels of biological function and abstraction.
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Affiliation(s)
- George Mountoufaris
- Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, USA; Tianqiao and Chrissy Chen Institute for Neuroscience, California Institute of Technology, Pasadena, CA, USA
| | - Aditya Nair
- Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, USA; Program in Computation and Neural Systems, California Institute of Technology, Pasadena, CA, USA; Tianqiao and Chrissy Chen Institute for Neuroscience, California Institute of Technology, Pasadena, CA, USA
| | - Bin Yang
- Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, USA; Tianqiao and Chrissy Chen Institute for Neuroscience, California Institute of Technology, Pasadena, CA, USA
| | - Dong-Wook Kim
- Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, USA; Tianqiao and Chrissy Chen Institute for Neuroscience, California Institute of Technology, Pasadena, CA, USA
| | - Amit Vinograd
- Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, USA; Tianqiao and Chrissy Chen Institute for Neuroscience, California Institute of Technology, Pasadena, CA, USA
| | - Samuel Kim
- Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, USA; Tianqiao and Chrissy Chen Institute for Neuroscience, California Institute of Technology, Pasadena, CA, USA
| | - Scott W Linderman
- Department of Statistics, Stanford University, Stanford, CA 94305, USA; Wu Tsai Neurosciences Institute, Stanford University, Stanford, CA 94305, USA
| | - David J Anderson
- Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, USA; Tianqiao and Chrissy Chen Institute for Neuroscience, California Institute of Technology, Pasadena, CA, USA; Howard Hughes Medical Institute, Pasadena, CA 91001, USA.
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12
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Liu M, Nair A, Coria N, Linderman SW, Anderson DJ. Encoding of female mating dynamics by a hypothalamic line attractor. Nature 2024; 634:901-909. [PMID: 39142338 PMCID: PMC11499253 DOI: 10.1038/s41586-024-07916-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2023] [Accepted: 08/06/2024] [Indexed: 08/16/2024]
Abstract
Females exhibit complex, dynamic behaviours during mating with variable sexual receptivity depending on hormonal status1-4. However, how their brains encode the dynamics of mating and receptivity remains largely unknown. The ventromedial hypothalamus, ventrolateral subdivision contains oestrogen receptor type 1-positive neurons that control mating receptivity in female mice5,6. Here, unsupervised dynamical system analysis of calcium imaging data from these neurons during mating uncovered a dimension with slow ramping activity, generating a line attractor in neural state space. Neural perturbations in behaving females demonstrated relaxation of population activity back into the attractor. During mating, population activity integrated male cues to ramp up along this attractor, peaking just before ejaculation. Activity in the attractor dimension was positively correlated with the degree of receptivity. Longitudinal imaging revealed that attractor dynamics appear and disappear across the oestrus cycle and are hormone dependent. These observations suggest that a hypothalamic line attractor encodes a persistent, escalating state of female sexual arousal or drive during mating. They also demonstrate that attractors can be reversibly modulated by hormonal status, on a timescale of days.
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Affiliation(s)
- Mengyu Liu
- Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, USA
- Tianqiao and Chrissy Chen Institute for Neuroscience Caltech, Pasadena, CA, USA
- Howard Hughes Medical Institute, Chevy Chase, MD, USA
| | - Aditya Nair
- Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, USA
- Tianqiao and Chrissy Chen Institute for Neuroscience Caltech, Pasadena, CA, USA
- Howard Hughes Medical Institute, Chevy Chase, MD, USA
| | - Nestor Coria
- Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, USA
- Tianqiao and Chrissy Chen Institute for Neuroscience Caltech, Pasadena, CA, USA
- Howard Hughes Medical Institute, Chevy Chase, MD, USA
| | - Scott W Linderman
- Department of Statistics, Stanford University, Stanford, CA, USA
- Wu Tsai Neurosciences Institute, Stanford University, Stanford, CA, USA
| | - David J Anderson
- Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, USA.
- Tianqiao and Chrissy Chen Institute for Neuroscience Caltech, Pasadena, CA, USA.
- Howard Hughes Medical Institute, Chevy Chase, MD, USA.
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13
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Degutis JK, Chaimow D, Haenelt D, Assem M, Duncan J, Haynes JD, Weiskopf N, Lorenz R. Dynamic layer-specific processing in the prefrontal cortex during working memory. Commun Biol 2024; 7:1140. [PMID: 39277694 PMCID: PMC11401931 DOI: 10.1038/s42003-024-06780-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/22/2023] [Accepted: 08/26/2024] [Indexed: 09/17/2024] Open
Abstract
The dorsolateral prefrontal cortex (dlPFC) is reliably engaged in working memory (WM) and comprises different cytoarchitectonic layers, yet their functional role in human WM is unclear. Here, participants completed a delayed-match-to-sample task while undergoing functional magnetic resonance imaging (fMRI) at ultra-high resolution. We examine layer-specific activity to manipulations in WM load and motor response. Superficial layers exhibit a preferential response to WM load during the delay and retrieval periods of a WM task, indicating a lamina-specific activation of the frontoparietal network. Multivariate patterns encoding WM load in the superficial layer dynamically change across the three periods of the task. Last, superficial and deep layers are non-differentially involved in the motor response, challenging earlier findings of a preferential deep layer activation. Taken together, our results provide new insights into the functional laminar circuitry of the dlPFC during WM and support a dynamic account of dlPFC coding.
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Affiliation(s)
- Jonas Karolis Degutis
- Department of Psychology, Humboldt-Universität zu Berlin, Berlin, Germany.
- Bernstein Center for Computational Neuroscience Berlin and Berlin Center for Advanced Neuroimaging, Charité Universitätsmedizin Berlin, corporate member of the Freie Universität Berlin, Humboldt-Universität zu Berlin, and Berlin Institute of Health, Berlin, Germany.
- Max Planck School of Cognition, Leipzig, Germany.
| | - Denis Chaimow
- Department of Neurophysics, Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany
| | - Daniel Haenelt
- Department of Neurophysics, Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany
| | - Moataz Assem
- MRC Cognition and Brain Sciences Unit, University of Cambridge, Cambridge, Cambridgeshire, UK
| | - John Duncan
- MRC Cognition and Brain Sciences Unit, University of Cambridge, Cambridge, Cambridgeshire, UK
| | - John-Dylan Haynes
- Department of Psychology, Humboldt-Universität zu Berlin, Berlin, Germany
- Bernstein Center for Computational Neuroscience Berlin and Berlin Center for Advanced Neuroimaging, Charité Universitätsmedizin Berlin, corporate member of the Freie Universität Berlin, Humboldt-Universität zu Berlin, and Berlin Institute of Health, Berlin, Germany
- Max Planck School of Cognition, Leipzig, Germany
- Research Training Group "Extrospection" and Berlin School of Mind and Brain, Humboldt-Universität zu Berlin, Berlin, Germany
- Research Cluster of Excellence "Science of Intelligence", Technische Universität Berlin, Berlin, Germany
- Collaborative Research Center "Volition and Cognitive Control", Technische Universität Dresden, Dresden, Germany
| | - Nikolaus Weiskopf
- Department of Psychology, Humboldt-Universität zu Berlin, Berlin, Germany
- Department of Neurophysics, Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany
- Felix Bloch Institute for Solid State Physics, Faculty of Physics and Earth Sciences, Leipzig University, Leipzig, Germany
- Wellcome Centre for Human Neuroimaging, Institute of Neurology, University College London, London, UK
| | - Romy Lorenz
- Department of Neurophysics, Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany.
- Max Planck Institute for Biological Cybernetics, Tübingen, Germany.
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14
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Gavenas J, Rutishauser U, Schurger A, Maoz U. Slow ramping emerges from spontaneous fluctuations in spiking neural networks. Nat Commun 2024; 15:7285. [PMID: 39179554 PMCID: PMC11344096 DOI: 10.1038/s41467-024-51401-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/13/2023] [Accepted: 08/05/2024] [Indexed: 08/26/2024] Open
Abstract
The capacity to initiate actions endogenously is critical for goal-directed behavior. Spontaneous voluntary actions are typically preceded by slow-ramping activity in medial frontal cortex that begins around two seconds before movement, which may reflect spontaneous fluctuations that influence action timing. However, the mechanisms by which these slow ramping signals emerge from single-neuron and network dynamics remain poorly understood. Here, we developed a spiking neural-network model that produces spontaneous slow ramping activity in single neurons and population activity with onsets ~2 s before threshold crossings. A key prediction of our model is that neurons that ramp together have correlated firing patterns before ramping onset. We confirmed this model-derived hypothesis in a dataset of human single neuron recordings from medial frontal cortex. Our results suggest that slow ramping signals reflect bounded spontaneous fluctuations that emerge from quasi-winner-take-all dynamics in clustered networks that are temporally stabilized by slow-acting synapses.
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Affiliation(s)
- Jake Gavenas
- Institute for Interdisciplinary Brain and Behavioral Sciences, Chapman University, Orange, CA, USA.
- Schmid College of Science and Technology, Chapman University, Orange, CA, USA.
- Department of Neurosurgery, Cedars-Sinai Medical Center, Los Angeles, CA, USA.
| | - Ueli Rutishauser
- Department of Neurosurgery, Cedars-Sinai Medical Center, Los Angeles, CA, USA
- Department of Neurology, Cedars-Sinai Medical Center, Los Angeles, CA, USA
- Center for Neural Science and Medicine, Department of Biomedical Sciences, Cedars-Sinai Medical Center, Los Angeles, CA, USA
- Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, USA
| | - Aaron Schurger
- Institute for Interdisciplinary Brain and Behavioral Sciences, Chapman University, Orange, CA, USA
- Crean College of Health and Behavioral Sciences, Chapman University, Orange, CA, USA
- INSERM U992, Cognitive Neuroimaging Unit, NeuroSpin Center, Gif sur Yvette, 91191, France
- Commissariat à l'Energie Atomique, Direction des Sciences du Vivant, I2BM, NeuroSpin Center, Gif sur Yvette, 91191, France
| | - Uri Maoz
- Institute for Interdisciplinary Brain and Behavioral Sciences, Chapman University, Orange, CA, USA.
- Schmid College of Science and Technology, Chapman University, Orange, CA, USA.
- Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, USA.
- Crean College of Health and Behavioral Sciences, Chapman University, Orange, CA, USA.
- Fowler School of Engineering, Chapman University, Orange, CA, USA.
- Anderson School of Management, University of California, Los Angeles, CA, USA.
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15
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Roshanaei M, Bahmani Z, Clark K, Daliri MR, Noudoost B. Working memory expedites the processing of visual signals within the extrastriate cortex. iScience 2024; 27:110489. [PMID: 39100691 PMCID: PMC11295472 DOI: 10.1016/j.isci.2024.110489] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2023] [Revised: 01/03/2024] [Accepted: 07/09/2024] [Indexed: 08/06/2024] Open
Abstract
Working memory is the ability to maintain information in the absence of sensory input. In this study, we investigated how working memory benefits processing in visual areas. Using a measure of phase consistency to detect the arrival time of visual signals to the middle temporal (MT) area, we assessed the impact of working memory on the speed of sensory processing. We recorded from MT neurons in two monkeys during a spatial working memory task with visual probes. When the memorized location closely matches the receptive field center of the recording site, visual input arrives sooner, but if the memorized location does not match the receptive field center then the arrival of visual information is delayed. Thus, working memory expedites the arrival of visual input in MT. These results reveal that even in the absence of firing rate changes, working memory can still benefit the processing of information within sensory areas.
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Affiliation(s)
- Majid Roshanaei
- Biomedical Engineering Department, School of Electrical Engineering, Iran University of Science and Technology (IUST), Narmak, P.O. Box 16846-13114, Tehran, Iran
| | - Zahra Bahmani
- Department of Electrical & Computer Engineering, Tarbiat Modares University, Tehran 1411713116, Iran
| | - Kelsey Clark
- Department of Ophthalmology and Visual Sciences, University of Utah, Salt Lake City, UT 84132, USA
| | - Mohammad Reza Daliri
- Biomedical Engineering Department, School of Electrical Engineering, Iran University of Science and Technology (IUST), Narmak, P.O. Box 16846-13114, Tehran, Iran
| | - Behrad Noudoost
- Department of Ophthalmology and Visual Sciences, University of Utah, Salt Lake City, UT 84132, USA
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16
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Cheung KYM, Nair A, Li LY, Shapiro MG, Anderson DJ. Population coding of predator imminence in the hypothalamus. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.08.12.607651. [PMID: 39211163 PMCID: PMC11360964 DOI: 10.1101/2024.08.12.607651] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 09/04/2024]
Abstract
Hypothalamic VMHdm SF1 neurons are activated by predator cues and are necessary and sufficient for instinctive defensive responses. However, such data do not distinguish which features of a predator encounter are encoded by VMHdm SF1 neural activity. To address this issue, we imaged VMHdm SF1 neurons at single-cell resolution in freely behaving mice exposed to a natural predator in varying contexts. Our results reveal that VMHdm SF1 neurons do not represent different defensive behaviors, but rather encode predator identity and multiple predator-evoked internal states, including threat-evoked fear/anxiety; neophobia or arousal; predator imminence; and safety. Notably, threat and safety are encoded bi-directionally by anti-correlated subpopulations. Finally, individual differences in predator defensiveness are correlated with differences in VMHdm SF1 response dynamics. Thus, different threat-related internal state variables are encoded by distinct neuronal subpopulations within a genetically defined, anatomically restricted hypothalamic cell class. Highlights Distinct subsets of VMHdm SF1 neurons encode multiple predator-evoked internal states. Anti-correlated subsets encode safety vs. threat in a bi-directional mannerA population code for predator imminence is identified using a novel assay VMHdm SF1 dynamics correlate with individual variation in predator defensiveness.
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17
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Cecchini G, DePass M, Baspinar E, Andujar M, Ramawat S, Pani P, Ferraina S, Destexhe A, Moreno-Bote R, Cos I. Cognitive mechanisms of learning in sequential decision-making under uncertainty: an experimental and theoretical approach. Front Behav Neurosci 2024; 18:1399394. [PMID: 39188591 PMCID: PMC11346247 DOI: 10.3389/fnbeh.2024.1399394] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2024] [Accepted: 07/19/2024] [Indexed: 08/28/2024] Open
Abstract
Learning to make adaptive decisions involves making choices, assessing their consequence, and leveraging this assessment to attain higher rewarding states. Despite vast literature on value-based decision-making, relatively little is known about the cognitive processes underlying decisions in highly uncertain contexts. Real world decisions are rarely accompanied by immediate feedback, explicit rewards, or complete knowledge of the environment. Being able to make informed decisions in such contexts requires significant knowledge about the environment, which can only be gained via exploration. Here we aim at understanding and formalizing the brain mechanisms underlying these processes. To this end, we first designed and performed an experimental task. Human participants had to learn to maximize reward while making sequences of decisions with only basic knowledge of the environment, and in the absence of explicit performance cues. Participants had to rely on their own internal assessment of performance to reveal a covert relationship between their choices and their subsequent consequences to find a strategy leading to the highest cumulative reward. Our results show that the participants' reaction times were longer whenever the decision involved a future consequence, suggesting greater introspection whenever a delayed value had to be considered. The learning time varied significantly across participants. Second, we formalized the neurocognitive processes underlying decision-making within this task, combining mean-field representations of competing neural populations with a reinforcement learning mechanism. This model provided a plausible characterization of the brain dynamics underlying these processes, and reproduced each aspect of the participants' behavior, from their reaction times and choices to their learning rates. In summary, both the experimental results and the model provide a principled explanation to how delayed value may be computed and incorporated into the neural dynamics of decision-making, and to how learning occurs in these uncertain scenarios.
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Affiliation(s)
- Gloria Cecchini
- Facultat de Matemàtiques i Informàtica, Universitat de Barcelona, Barcelona, Spain
- Center for Brain and Cognition, DTIC, Universitat Pompeu Fabra, Barcelona, Spain
| | - Michael DePass
- Center for Brain and Cognition, DTIC, Universitat Pompeu Fabra, Barcelona, Spain
| | - Emre Baspinar
- CNRS, Institute of Neuroscience (NeuroPSI), Paris-Saclay University, Saclay, France
| | - Marta Andujar
- Department of Physiology and Pharmacology, Sapienza University of Rome, Rome, Italy
| | - Surabhi Ramawat
- Department of Physiology and Pharmacology, Sapienza University of Rome, Rome, Italy
| | - Pierpaolo Pani
- Department of Physiology and Pharmacology, Sapienza University of Rome, Rome, Italy
| | - Stefano Ferraina
- Department of Physiology and Pharmacology, Sapienza University of Rome, Rome, Italy
| | - Alain Destexhe
- CNRS, Institute of Neuroscience (NeuroPSI), Paris-Saclay University, Saclay, France
| | - Rubén Moreno-Bote
- Center for Brain and Cognition, DTIC, Universitat Pompeu Fabra, Barcelona, Spain
- Serra-Hunter Fellow Programme, Barcelona, Spain
| | - Ignasi Cos
- Facultat de Matemàtiques i Informàtica, Universitat de Barcelona, Barcelona, Spain
- Serra-Hunter Fellow Programme, Barcelona, Spain
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18
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Rudelt L, González Marx D, Spitzner FP, Cramer B, Zierenberg J, Priesemann V. Signatures of hierarchical temporal processing in the mouse visual system. PLoS Comput Biol 2024; 20:e1012355. [PMID: 39173067 PMCID: PMC11373856 DOI: 10.1371/journal.pcbi.1012355] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2024] [Revised: 09/04/2024] [Accepted: 07/23/2024] [Indexed: 08/24/2024] Open
Abstract
A core challenge for the brain is to process information across various timescales. This could be achieved by a hierarchical organization of temporal processing through intrinsic mechanisms (e.g., recurrent coupling or adaptation), but recent evidence from spike recordings of the rodent visual system seems to conflict with this hypothesis. Here, we used an optimized information-theoretic and classical autocorrelation analysis to show that information- and correlation timescales of spiking activity increase along the anatomical hierarchy of the mouse visual system under visual stimulation, while information-theoretic predictability decreases. Moreover, intrinsic timescales for spontaneous activity displayed a similar hierarchy, whereas the hierarchy of predictability was stimulus-dependent. We could reproduce these observations in a basic recurrent network model with correlated sensory input. Our findings suggest that the rodent visual system employs intrinsic mechanisms to achieve longer integration for higher cortical areas, while simultaneously reducing predictability for an efficient neural code.
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Affiliation(s)
- Lucas Rudelt
- Max-Planck-Institute for Dynamics and Self-Organization, Göttingen, Germany
- Institute for the Dynamics of Complex Systems, University of Göttingen, Göttingen, Germany
| | - Daniel González Marx
- Max-Planck-Institute for Dynamics and Self-Organization, Göttingen, Germany
- Institute for the Dynamics of Complex Systems, University of Göttingen, Göttingen, Germany
| | - F Paul Spitzner
- Max-Planck-Institute for Dynamics and Self-Organization, Göttingen, Germany
- Institute for the Dynamics of Complex Systems, University of Göttingen, Göttingen, Germany
| | - Benjamin Cramer
- Kirchhoff-Institute for Physics, Heidelberg University, Heidelberg, Germany
| | - Johannes Zierenberg
- Max-Planck-Institute for Dynamics and Self-Organization, Göttingen, Germany
- Institute for the Dynamics of Complex Systems, University of Göttingen, Göttingen, Germany
| | - Viola Priesemann
- Max-Planck-Institute for Dynamics and Self-Organization, Göttingen, Germany
- Institute for the Dynamics of Complex Systems, University of Göttingen, Göttingen, Germany
- Bernstein Center for Computational Neuroscience (BCCN), Göttingen, Germany
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19
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Stroud JP, Duncan J, Lengyel M. The computational foundations of dynamic coding in working memory. Trends Cogn Sci 2024; 28:614-627. [PMID: 38580528 DOI: 10.1016/j.tics.2024.02.011] [Citation(s) in RCA: 9] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2023] [Revised: 02/29/2024] [Accepted: 02/29/2024] [Indexed: 04/07/2024]
Abstract
Working memory (WM) is a fundamental aspect of cognition. WM maintenance is classically thought to rely on stable patterns of neural activities. However, recent evidence shows that neural population activities during WM maintenance undergo dynamic variations before settling into a stable pattern. Although this has been difficult to explain theoretically, neural network models optimized for WM typically also exhibit such dynamics. Here, we examine stable versus dynamic coding in neural data, classical models, and task-optimized networks. We review principled mathematical reasons for why classical models do not, while task-optimized models naturally do exhibit dynamic coding. We suggest an update to our understanding of WM maintenance, in which dynamic coding is a fundamental computational feature rather than an epiphenomenon.
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Affiliation(s)
- Jake P Stroud
- Computational and Biological Learning Lab, Department of Engineering, University of Cambridge, Cambridge, UK.
| | - John Duncan
- MRC Cognition and Brain Sciences Unit, University of Cambridge, Cambridge, UK
| | - Máté Lengyel
- Computational and Biological Learning Lab, Department of Engineering, University of Cambridge, Cambridge, UK; Center for Cognitive Computation, Department of Cognitive Science, Central European University, Budapest, Hungary
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20
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Bays PM, Schneegans S, Ma WJ, Brady TF. Representation and computation in visual working memory. Nat Hum Behav 2024; 8:1016-1034. [PMID: 38849647 DOI: 10.1038/s41562-024-01871-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2022] [Accepted: 03/22/2024] [Indexed: 06/09/2024]
Abstract
The ability to sustain internal representations of the sensory environment beyond immediate perception is a fundamental requirement of cognitive processing. In recent years, debates regarding the capacity and fidelity of the working memory (WM) system have advanced our understanding of the nature of these representations. In particular, there is growing recognition that WM representations are not merely imperfect copies of a perceived object or event. New experimental tools have revealed that observers possess richer information about the uncertainty in their memories and take advantage of environmental regularities to use limited memory resources optimally. Meanwhile, computational models of visuospatial WM formulated at different levels of implementation have converged on common principles relating capacity to variability and uncertainty. Here we review recent research on human WM from a computational perspective, including the neural mechanisms that support it.
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Affiliation(s)
- Paul M Bays
- Department of Psychology, University of Cambridge, Cambridge, UK
| | | | - Wei Ji Ma
- Center for Neural Science and Department of Psychology, New York University, New York, NY, USA
| | - Timothy F Brady
- Department of Psychology, University of California, San Diego, La Jolla, CA, USA.
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21
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Kay K, Biderman N, Khajeh R, Beiran M, Cueva CJ, Shohamy D, Jensen G, Wei XX, Ferrera VP, Abbott LF. Emergent neural dynamics and geometry for generalization in a transitive inference task. PLoS Comput Biol 2024; 20:e1011954. [PMID: 38662797 PMCID: PMC11125559 DOI: 10.1371/journal.pcbi.1011954] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2023] [Revised: 05/24/2024] [Accepted: 02/28/2024] [Indexed: 05/25/2024] Open
Abstract
Relational cognition-the ability to infer relationships that generalize to novel combinations of objects-is fundamental to human and animal intelligence. Despite this importance, it remains unclear how relational cognition is implemented in the brain due in part to a lack of hypotheses and predictions at the levels of collective neural activity and behavior. Here we discovered, analyzed, and experimentally tested neural networks (NNs) that perform transitive inference (TI), a classic relational task (if A > B and B > C, then A > C). We found NNs that (i) generalized perfectly, despite lacking overt transitive structure prior to training, (ii) generalized when the task required working memory (WM), a capacity thought to be essential to inference in the brain, (iii) emergently expressed behaviors long observed in living subjects, in addition to a novel order-dependent behavior, and (iv) expressed different task solutions yielding alternative behavioral and neural predictions. Further, in a large-scale experiment, we found that human subjects performing WM-based TI showed behavior inconsistent with a class of NNs that characteristically expressed an intuitive task solution. These findings provide neural insights into a classical relational ability, with wider implications for how the brain realizes relational cognition.
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Affiliation(s)
- Kenneth Kay
- Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, New York, United States of America
- Center for Theoretical Neuroscience, Columbia University, New York, New York, United States of America
- Grossman Center for the Statistics of Mind, Columbia University, New York, New York, United States of America
| | - Natalie Biderman
- Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, New York, United States of America
- Department of Psychology, Columbia University, New York, New York, United States of America
| | - Ramin Khajeh
- Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, New York, United States of America
- Center for Theoretical Neuroscience, Columbia University, New York, New York, United States of America
| | - Manuel Beiran
- Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, New York, United States of America
- Center for Theoretical Neuroscience, Columbia University, New York, New York, United States of America
| | - Christopher J. Cueva
- Department of Brain and Cognitive Sciences, MIT, Cambridge, Massachusetts, United States of America
| | - Daphna Shohamy
- Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, New York, United States of America
- Department of Psychology, Columbia University, New York, New York, United States of America
- The Kavli Institute for Brain Science, Columbia University, New York, New York, United States of America
| | - Greg Jensen
- Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, New York, United States of America
- Department of Neuroscience, Columbia University Medical Center, New York, New York, United States of America
- Department of Psychology at Reed College, Portland, Oregon, United States of America
| | - Xue-Xin Wei
- Departments of Neuroscience and Psychology, The University of Texas at Austin, Austin, Texas, United States of America
| | - Vincent P. Ferrera
- Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, New York, United States of America
- Department of Neuroscience, Columbia University Medical Center, New York, New York, United States of America
- Department of Psychiatry, Columbia University Medical Center, New York, New York, United States of America
| | - LF Abbott
- Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, New York, United States of America
- Center for Theoretical Neuroscience, Columbia University, New York, New York, United States of America
- The Kavli Institute for Brain Science, Columbia University, New York, New York, United States of America
- Department of Neuroscience, Columbia University Medical Center, New York, New York, United States of America
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22
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Yao J, Hou R, Fan H, Liu J, Chen Z, Hou J, Cheng Q, Li CT. Prefrontal projections modulate recurrent circuitry in the insular cortex to support short-term memory. Cell Rep 2024; 43:113756. [PMID: 38358886 DOI: 10.1016/j.celrep.2024.113756] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/01/2023] [Revised: 11/30/2023] [Accepted: 01/23/2024] [Indexed: 02/17/2024] Open
Abstract
Short-term memory (STM) maintains information during a short delay period. How long-range and local connections interact to support STM encoding remains elusive. Here, we tackle the problem focusing on long-range projections from the medial prefrontal cortex (mPFC) to the anterior agranular insular cortex (aAIC) in head-fixed mice performing an olfactory delayed-response task. Optogenetic and electrophysiological experiments reveal the behavioral importance of the two regions in encoding STM information. Spike-correlogram analysis reveals strong local and cross-region functional coupling (FC) between memory neurons encoding the same information. Optogenetic suppression of mPFC-aAIC projections during the delay period reduces behavioral performance, the proportion of memory neurons, and memory-specific FC within the aAIC, whereas optogenetic excitation enhances all of them. mPFC-aAIC projections also bidirectionally modulate the efficacy of STM-information transfer, measured by the contribution of FC spiking pairs to the memory-coding ability of following neurons. Thus, prefrontal projections modulate insular neurons' functional connectivity and memory-coding ability to support STM.
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Affiliation(s)
- Jian Yao
- Institute of Neuroscience, State Key Laboratory of Neuroscience, CAS Center for Excellence in Brain Science and Intelligence Technology, Chinese Academy of Sciences, Shanghai 200031, China; Lingang Laboratory, Shanghai 200031, China
| | - Ruiqing Hou
- Institute of Neuroscience, State Key Laboratory of Neuroscience, CAS Center for Excellence in Brain Science and Intelligence Technology, Chinese Academy of Sciences, Shanghai 200031, China
| | - Hongmei Fan
- Institute of Neuroscience, State Key Laboratory of Neuroscience, CAS Center for Excellence in Brain Science and Intelligence Technology, Chinese Academy of Sciences, Shanghai 200031, China
| | - Jiawei Liu
- Institute of Neuroscience, State Key Laboratory of Neuroscience, CAS Center for Excellence in Brain Science and Intelligence Technology, Chinese Academy of Sciences, Shanghai 200031, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Zhaoqin Chen
- Shanghai Center for Brain Science and Brain-Inspired Technology, Shanghai 200031, China
| | - Jincan Hou
- Institute of Neuroscience, State Key Laboratory of Neuroscience, CAS Center for Excellence in Brain Science and Intelligence Technology, Chinese Academy of Sciences, Shanghai 200031, China; Lingang Laboratory, Shanghai 200031, China
| | - Qi Cheng
- Institute of Neuroscience, State Key Laboratory of Neuroscience, CAS Center for Excellence in Brain Science and Intelligence Technology, Chinese Academy of Sciences, Shanghai 200031, China; Lingang Laboratory, Shanghai 200031, China
| | - Chengyu T Li
- Institute of Neuroscience, State Key Laboratory of Neuroscience, CAS Center for Excellence in Brain Science and Intelligence Technology, Chinese Academy of Sciences, Shanghai 200031, China; Lingang Laboratory, Shanghai 200031, China; Shanghai Center for Brain Science and Brain-Inspired Technology, Shanghai 200031, China.
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23
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Affan RO, Bright IM, Pemberton LN, Cruzado NA, Scott BB, Howard MW. Ramping Dynamics in the Frontal Cortex Unfold Over Multiple Timescales During Motor Planning. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.02.05.578819. [PMID: 38370792 PMCID: PMC10871223 DOI: 10.1101/2024.02.05.578819] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/20/2024]
Abstract
Plans are formulated and refined over the period leading to their execution, ensuring that the appropriate behavior is enacted at just the right time. While existing evidence suggests that memory circuits convey the passage of time through diverse neuronal responses, it remains unclear whether the neural circuits involved in planning behavior exhibit analogous temporal dynamics. Using publicly available data, we analyzed how activity in the frontal motor cortex evolves during motor planning. Individual neurons exhibited diverse ramping activity throughout a delay interval that preceded a planned movement. The collective activity of these neurons was useful for making temporal predictions that became increasingly precise as the movement time approached. This temporal diversity gave rise to a spectrum of encoding patterns, ranging from stable to dynamic representations of the upcoming movement. Our results indicate that neural activity unfolds over multiple timescales during motor planning, suggesting a shared mechanism in the brain for processing temporal information related to both past memories and future plans.
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Affiliation(s)
- R O Affan
- Graduate Program in Neuroscience, Boston University, Boston, MA
| | - I M Bright
- Department of Psychological and Brain Sciences, Boston University, Boston, MA 02215
| | - L N Pemberton
- Department of Psychological and Brain Sciences, Boston University, Boston, MA 02215
| | - N A Cruzado
- Graduate Program in Neuroscience, Boston University, Boston, MA
| | - B B Scott
- Department of Psychological and Brain Sciences, Boston University, Boston, MA 02215
| | - M W Howard
- Department of Psychological and Brain Sciences, Boston University, Boston, MA 02215
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24
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Trepka E, Spitmaan M, Qi XL, Constantinidis C, Soltani A. Training-Dependent Gradients of Timescales of Neural Dynamics in the Primate Prefrontal Cortex and Their Contributions to Working Memory. J Neurosci 2024; 44:e2442212023. [PMID: 37973375 PMCID: PMC10866190 DOI: 10.1523/jneurosci.2442-21.2023] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2021] [Revised: 10/23/2023] [Accepted: 10/26/2023] [Indexed: 11/19/2023] Open
Abstract
Cortical neurons exhibit multiple timescales related to dynamics of spontaneous fluctuations (intrinsic timescales) and response to task events (seasonal timescales) in addition to selectivity to task-relevant signals. These timescales increase systematically across the cortical hierarchy, for example, from parietal to prefrontal and cingulate cortex, pointing to their role in cortical computations. It is currently unknown whether these timescales are inherent properties of neurons and/or depend on training in a specific task and if the latter, how their modulations contribute to task performance. To address these questions, we analyzed single-cell recordings within five subregions of the prefrontal cortex (PFC) of male macaques before and after training on a working-memory task. We found fine-grained but opposite gradients of intrinsic and seasonal timescales that mainly appeared after training. Intrinsic timescales decreased whereas seasonal timescales increased from posterior to anterior subregions within both dorsal and ventral PFC. Moreover, training was accompanied by increases in proportions of neurons that exhibited intrinsic and seasonal timescales. These effects were comparable to the emergence of response selectivity due to training. Finally, task selectivity accompanied opposite neural dynamics such that neurons with task-relevant selectivity exhibited longer intrinsic and shorter seasonal timescales. Notably, neurons with longer intrinsic and shorter seasonal timescales exhibited superior population-level coding, but these advantages extended to the delay period mainly after training. Together, our results provide evidence for plastic, fine-grained gradients of timescales within PFC that can influence both single-cell and population coding, pointing to the importance of these timescales in understanding cognition.
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Affiliation(s)
- Ethan Trepka
- Department of Psychological and Brain Sciences, Dartmouth College, Hanover 03755, New Hampshire
- Neurosciences Program, Stanford University, Stanford 94305, California
| | - Mehran Spitmaan
- Department of Psychological and Brain Sciences, Dartmouth College, Hanover 03755, New Hampshire
| | - Xue-Lian Qi
- Department of Neurobiology and Anatomy, Wake Forest School of Medicine, Winston-Salem 27157, North Carolina
| | | | - Alireza Soltani
- Department of Psychological and Brain Sciences, Dartmouth College, Hanover 03755, New Hampshire
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25
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Lin XX, Nieder A, Jacob SN. The neuronal implementation of representational geometry in primate prefrontal cortex. SCIENCE ADVANCES 2023; 9:eadh8685. [PMID: 38091404 PMCID: PMC10848744 DOI: 10.1126/sciadv.adh8685] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/20/2023] [Accepted: 11/14/2023] [Indexed: 12/18/2023]
Abstract
Modern neuroscience has seen the rise of a population-doctrine that represents cognitive variables using geometrical structures in activity space. Representational geometry does not, however, account for how individual neurons implement these representations. Leveraging the principle of sparse coding, we present a framework to dissect representational geometry into biologically interpretable components that retain links to single neurons. Applied to extracellular recordings from the primate prefrontal cortex in a working memory task with interference, the identified components revealed disentangled and sequential memory representations including the recovery of memory content after distraction, signals hidden to conventional analyses. Each component was contributed by small subpopulations of neurons with distinct spiking properties and response dynamics. Modeling showed that such sparse implementations are supported by recurrently connected circuits as in prefrontal cortex. The perspective of neuronal implementation links representational geometries to their cellular constituents, providing mechanistic insights into how neural systems encode and process information.
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Affiliation(s)
- Xiao-Xiong Lin
- Translational Neurotechnology Laboratory, Department of Neurosurgery, Klinikum rechts der Isar, Technical University of Munich, Germany
- Graduate School of Systemic Neurosciences, Ludwig-Maximilians-University Munich, Germany
| | | | - Simon N. Jacob
- Translational Neurotechnology Laboratory, Department of Neurosurgery, Klinikum rechts der Isar, Technical University of Munich, Germany
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26
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Ceccarelli F, Ferrucci L, Londei F, Ramawat S, Brunamonti E, Genovesio A. Static and dynamic coding in distinct cell types during associative learning in the prefrontal cortex. Nat Commun 2023; 14:8325. [PMID: 38097560 PMCID: PMC10721651 DOI: 10.1038/s41467-023-43712-2] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2023] [Accepted: 11/17/2023] [Indexed: 12/17/2023] Open
Abstract
The prefrontal cortex maintains information in memory through static or dynamic population codes depending on task demands, but whether the population coding schemes used are learning-dependent and differ between cell types is currently unknown. We investigate the population coding properties and temporal stability of neurons recorded from male macaques in two mapping tasks during and after stimulus-response associative learning, and then we use a Strategy task with the same stimuli and responses as control. We identify a heterogeneous population coding for stimuli, responses, and novel associations: static for putative pyramidal cells and dynamic for putative interneurons that show the strongest selectivity for all the variables. The population coding of learned associations shows overall the highest stability driven by cell types, with interneurons changing from dynamic to static coding after successful learning. The results support that prefrontal microcircuitry expresses mixed population coding governed by cell types and changes its stability during associative learning.
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Affiliation(s)
- Francesco Ceccarelli
- Department of Physiology and Pharmacology, Sapienza University, 00185, Rome, Italy
| | - Lorenzo Ferrucci
- Department of Physiology and Pharmacology, Sapienza University, 00185, Rome, Italy
| | - Fabrizio Londei
- Department of Physiology and Pharmacology, Sapienza University, 00185, Rome, Italy
- PhD program in Behavioral Neuroscience, Sapienza University, Rome, Italy
| | - Surabhi Ramawat
- Department of Physiology and Pharmacology, Sapienza University, 00185, Rome, Italy
| | - Emiliano Brunamonti
- Department of Physiology and Pharmacology, Sapienza University, 00185, Rome, Italy
| | - Aldo Genovesio
- Department of Physiology and Pharmacology, Sapienza University, 00185, Rome, Italy.
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27
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Stroud JP, Watanabe K, Suzuki T, Stokes MG, Lengyel M. Optimal information loading into working memory explains dynamic coding in the prefrontal cortex. Proc Natl Acad Sci U S A 2023; 120:e2307991120. [PMID: 37983510 PMCID: PMC10691340 DOI: 10.1073/pnas.2307991120] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2023] [Accepted: 09/29/2023] [Indexed: 11/22/2023] Open
Abstract
Working memory involves the short-term maintenance of information and is critical in many tasks. The neural circuit dynamics underlying working memory remain poorly understood, with different aspects of prefrontal cortical (PFC) responses explained by different putative mechanisms. By mathematical analysis, numerical simulations, and using recordings from monkey PFC, we investigate a critical but hitherto ignored aspect of working memory dynamics: information loading. We find that, contrary to common assumptions, optimal loading of information into working memory involves inputs that are largely orthogonal, rather than similar, to the late delay activities observed during memory maintenance, naturally leading to the widely observed phenomenon of dynamic coding in PFC. Using a theoretically principled metric, we show that PFC exhibits the hallmarks of optimal information loading. We also find that optimal information loading emerges as a general dynamical strategy in task-optimized recurrent neural networks. Our theory unifies previous, seemingly conflicting theories of memory maintenance based on attractor or purely sequential dynamics and reveals a normative principle underlying dynamic coding.
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Affiliation(s)
- Jake P. Stroud
- Computational and Biological Learning Lab, Department of Engineering, University of Cambridge, CambridgeCB2 1PZ, United Kingdom
| | - Kei Watanabe
- Graduate School of Frontier Biosciences, Osaka University, Osaka565-0871, Japan
| | - Takafumi Suzuki
- Center for Information and Neural Networks, National Institute of Communication and Information Technology, Osaka565-0871, Japan
| | - Mark G. Stokes
- Department of Experimental Psychology, University of Oxford, OxfordOX2 6GG, United Kingdom
- Oxford Centre for Human Brain Activity, Wellcome Centre for Integrative Neuroimaging, Department of Psychiatry, University of Oxford, OxfordOX3 9DU, United Kingdom
| | - Máté Lengyel
- Computational and Biological Learning Lab, Department of Engineering, University of Cambridge, CambridgeCB2 1PZ, United Kingdom
- Center for Cognitive Computation, Department of Cognitive Science, Central European University, BudapestH-1051, Hungary
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28
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Ott T, Stein AM, Nieder A. Dopamine receptor activation regulates reward expectancy signals during cognitive control in primate prefrontal neurons. Nat Commun 2023; 14:7537. [PMID: 37985776 PMCID: PMC10661983 DOI: 10.1038/s41467-023-43271-6] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2023] [Accepted: 11/06/2023] [Indexed: 11/22/2023] Open
Abstract
Dopamine neurons respond to reward-predicting cues but also modulate information processing in the prefrontal cortex essential for cognitive control. Whether dopamine controls reward expectation signals in prefrontal cortex that motivate cognitive control is unknown. We trained two male macaques on a working memory task while varying the reward size earned for successful task completion. We recorded neurons in lateral prefrontal cortex while simultaneously stimulating dopamine D1 receptor (D1R) or D2 receptor (D2R) families using micro-iontophoresis. We show that many neurons predict reward size throughout the trial. D1R stimulation showed mixed effects following reward cues but decreased reward expectancy coding during the memory delay. By contrast, D2R stimulation increased reward expectancy coding in multiple task periods, including cueing and memory periods. Stimulation of either dopamine receptors increased the neurons' selective responses to reward size upon reward delivery. The differential modulation of reward expectancy by dopamine receptors suggests that dopamine regulates reward expectancy necessary for successful cognitive control.
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Affiliation(s)
- Torben Ott
- Animal Physiology, Institute of Neurobiology, Auf der Morgenstelle 28, University of Tübingen, 72076, Tübingen, Germany.
- Bernstein Center for Computational Neuroscience and Institute of Biology, Humboldt-University of Berlin, 10099, Berlin, Germany.
| | - Anna Marlina Stein
- Animal Physiology, Institute of Neurobiology, Auf der Morgenstelle 28, University of Tübingen, 72076, Tübingen, Germany
| | - Andreas Nieder
- Animal Physiology, Institute of Neurobiology, Auf der Morgenstelle 28, University of Tübingen, 72076, Tübingen, Germany.
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29
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Mountoufaris G, Nair A, Yang B, Kim DW, Anderson DJ. Neuropeptide Signaling is Required to Implement a Line Attractor Encoding a Persistent Internal Behavioral State. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.11.01.565073. [PMID: 37961374 PMCID: PMC10635056 DOI: 10.1101/2023.11.01.565073] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/15/2023]
Abstract
Internal states drive survival behaviors, but their neural implementation is not well understood. Recently we identified a line attractor in the ventromedial hypothalamus (VMH) that represents an internal state of aggressiveness. Line attractors can be implemented by recurrent connectivity and/or neuromodulatory signaling, but evidence for the latter is scant. Here we show that neuropeptidergic signaling is necessary for line attractor dynamics in this system, using a novel approach that integrates cell type-specific, anatomically restricted CRISPR/Cas9-based gene editing with microendoscopic calcium imaging. Co-disruption of receptors for oxytocin and vasopressin in adult VMH Esr1 + neurons that control aggression suppressed attack, reduced persistent neural activity and eliminated line attractor dynamics, while only modestly impacting neural activity and sex- or behavior-tuning. These data identify a requisite role for neuropeptidergic signaling in implementing a behaviorally relevant line attractor. Our approach should facilitate mechanistic studies in neuroscience that bridge different levels of biological function and abstraction.
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30
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Funahashi S, Gao B, Takeda K, Watanabe Y, Wu J, Yan T. Individual prefrontal neurons contribute to sensory-to-motor information transformation by rotating reference frames during spatial working memory performance. Cereb Cortex 2023; 33:10258-10271. [PMID: 37557911 DOI: 10.1093/cercor/bhad280] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/14/2023] [Revised: 07/12/2023] [Accepted: 07/13/2023] [Indexed: 08/11/2023] Open
Abstract
Performing working memory tasks correctly requires not only the temporary maintenance of information but also the visual-to-motor transformation of information. Although sustained delay-period activity is known to be a mechanism for temporarily maintaining information, the mechanism for information transformation is not well known. An analysis using a population of delay-period activities recorded from prefrontal neurons visualized a gradual change of maintained information from sensory to motor as the delay period progressed. However, the contributions of individual prefrontal neurons to this process are not known. In the present study, we used a version of the delayed-response task, in which monkeys needed to make a saccade 90o clockwise from a visual cue after a 3-s delay, and examined the temporal change in the preferred directions of delay-period activity during the delay period for individual neurons. One group of prefrontal neurons encoded the cue direction by a retinotopic reference frame and either maintained it throughout the delay period or rotated it 90o counterclockwise to adjust visual information to saccade information, whereas other groups of neurons encoded the cue direction by a saccade-based reference frame and rotated it 90o clockwise. The results indicate that visual-to-motor information transformation is achieved by manipulating the reference frame to adjust visual coordinates to motor coordinates.
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Affiliation(s)
- Shintaro Funahashi
- Advanced Research Institute for Multidisciplinary Science, Beijing Institute of Technology, Haidian District, Beijing 100018, People's Republic of China
- School of Life Science, Beijing Institute of Technology, Haidian District, Beijing 100018, People's Republic of China
- Department of Cognitive and Behavioral Sciences, Graduate School of Human and Environmental Studies, Kyoto University, Yoshida, Sakyo-ku, Kyoto 606-8501, Japan
- Kokoro Research Center, Kyoto University, Yoshida, Sakyo-ku, Kyoto 606-8501, Japan
| | - Binbin Gao
- School of Life Science, Beijing Institute of Technology, Haidian District, Beijing 100018, People's Republic of China
| | - Kazuyoshi Takeda
- Department of Cognitive and Behavioral Sciences, Graduate School of Human and Environmental Studies, Kyoto University, Yoshida, Sakyo-ku, Kyoto 606-8501, Japan
| | - Yumiko Watanabe
- Department of Cognitive and Behavioral Sciences, Graduate School of Human and Environmental Studies, Kyoto University, Yoshida, Sakyo-ku, Kyoto 606-8501, Japan
| | - Jinglong Wu
- School of Medical Technology, Beijing Institute of Technology, Haidian District, Beijing 100018, People's Republic of China
| | - Tianyi Yan
- School of Life Science, Beijing Institute of Technology, Haidian District, Beijing 100018, People's Republic of China
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31
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Li HH, Curtis CE. Neural population dynamics of human working memory. Curr Biol 2023; 33:3775-3784.e4. [PMID: 37595590 PMCID: PMC10528783 DOI: 10.1016/j.cub.2023.07.067] [Citation(s) in RCA: 14] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2023] [Revised: 06/20/2023] [Accepted: 07/31/2023] [Indexed: 08/20/2023]
Abstract
The activity of neurons in macaque prefrontal cortex (PFC) persists during working memory (WM) delays, providing a mechanism for memory.1,2,3,4,5,6,7,8,9,10,11 Although theory,11,12 including formal network models,13,14 assumes that WM codes are stable over time, PFC neurons exhibit dynamics inconsistent with these assumptions.15,16,17,18,19 Recently, multivariate reanalyses revealed the coexistence of both stable and dynamic WM codes in macaque PFC.20,21,22,23 Human EEG studies also suggest that WM might contain dynamics.24,25 Nonetheless, how WM dynamics vary across the cortical hierarchy and which factors drive dynamics remain unknown. To elucidate WM dynamics in humans, we decoded WM content from fMRI responses across multiple cortical visual field maps.26,27,28,29,30,31,32,33,34,35,36,37,38,39,40,41,42,43,44,45,46,47,48 We found coexisting stable and dynamic neural representations of WM during a memory-guided saccade task. Geometric analyses of neural subspaces revealed that early visual cortex exhibited stronger dynamics than high-level visual and frontoparietal cortex. Leveraging models of population receptive fields, we visualized and made the neural dynamics interpretable. We found that during WM delays, V1 population initially encoded a narrowly tuned bump of activation centered on the peripheral memory target. Remarkably, this bump then spread inward toward foveal locations, forming a vector along the trajectory of the forthcoming memory-guided saccade. In other words, the neural code transformed into an abstraction of the stimulus more proximal to memory-guided behavior. Therefore, theories of WM must consider both sensory features and their task-relevant abstractions because changes in the format of memoranda naturally drive neural dynamics.
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Affiliation(s)
- Hsin-Hung Li
- Department of Psychology, New York University, New York, NY 10003, USA; Center for Neural Science, New York University, New York, NY 10003, USA
| | - Clayton E Curtis
- Department of Psychology, New York University, New York, NY 10003, USA; Center for Neural Science, New York University, New York, NY 10003, USA.
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32
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Trepka E, Spitmaan M, Qi XL, Constantinidis C, Soltani A. Training-dependent gradients of timescales of neural dynamics in the primate prefrontal cortex and their contributions to working memory. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.09.01.555857. [PMID: 37693584 PMCID: PMC10491183 DOI: 10.1101/2023.09.01.555857] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 09/12/2023]
Abstract
Cortical neurons exhibit multiple timescales related to dynamics of spontaneous fluctuations (intrinsic timescales) and response to task events (seasonal timescales) in addition to selectivity to task-relevant signals. These timescales increase systematically across the cortical hierarchy, e.g., from parietal to prefrontal and cingulate cortex, pointing to their role in cortical computations. It is currently unknown whether these timescales depend on training in a specific task and/or are an inherent property of neurons, and whether more fine-grained hierarchies of timescales exist within specific cortical regions. To address these questions, we analyzed single-cell recordings within five subregions of the prefrontal cortex (PFC) of male macaques before and after training on a working-memory task. We found fine-grained but opposite gradients of intrinsic and seasonal timescales that mainly appeared after training. Intrinsic timescales decreased whereas seasonal timescales increased from posterior to anterior subregions within both dorsal and ventral PFC. Moreover, training was accompanied by increases in proportions of neurons that exhibited intrinsic and seasonal timescales. These effects were comparable to the emergence of response selectivity due to training. Finally, task selectivity accompanied opposite neural dynamics such that neurons with task-relevant selectivity exhibited longer intrinsic and shorter seasonal timescales. Notably, neurons with longer intrinsic and shorter seasonal timescales exhibited superior population-level coding, but these advantages extended to the delay period mainly after training. Together, our results provide evidence for plastic, fine-grained gradients of timescales within PFC that can influence both single-cell and population coding, pointing to the importance of these timescales in understanding cognition. Significance statement Recent studies have demonstrated that neural responses exhibit dynamics with different timescales that follow a certain order or hierarchy across cortical areas. While the hierarchy of timescales is consistent across different tasks, it is unknown if these timescales emerge only after training or if they represent inherent properties of neurons. To answer this question, we estimated multiple timescales in neural response across five subregions of the monkeys' lateral prefrontal cortex before and after training on a working-memory task. Our results provide evidence for fine-grained gradients related to certain neural dynamics. Moreover, we show that these timescales depend on and can be modulated by training in a cognitive task, and contribute to encoding of task-relevant information at single-cell and population levels.
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33
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Sandhaeger F, Siegel M. Testing the generalization of neural representations. Neuroimage 2023; 278:120258. [PMID: 37429371 PMCID: PMC10443234 DOI: 10.1016/j.neuroimage.2023.120258] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2022] [Revised: 05/27/2023] [Accepted: 06/28/2023] [Indexed: 07/12/2023] Open
Abstract
Multivariate analysis methods are widely used in neuroscience to investigate the presence and structure of neural representations. Representational similarities across time or contexts are often investigated using pattern generalization, e.g. by training and testing multivariate decoders in different contexts, or by comparable pattern-based encoding methods. It is however unclear what conclusions can be validly drawn on the underlying neural representations when significant pattern generalization is found in mass signals such as LFP, EEG, MEG, or fMRI. Using simulations, we show how signal mixing and dependencies between measurements can drive significant pattern generalization even though the true underlying representations are orthogonal. We suggest that, using an accurate estimate of the expected pattern generalization given identical representations, it is nonetheless possible to test meaningful hypotheses about the generalization of neural representations. We offer such an estimate of the expected magnitude of pattern generalization and demonstrate how this measure can be used to assess the similarity and differences of neural representations across time and contexts.
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Affiliation(s)
- Florian Sandhaeger
- Department of Neural Dynamics and Magnetoencephalography, Hertie Institute for Clinical Brain Research, University of Tübingen, Germany; Centre for Integrative Neuroscience, University of Tübingen, Germany; MEG Center, University of Tübingen, Germany; IMPRS for Cognitive and Systems Neuroscience, University of Tübingen, Germany.
| | - Markus Siegel
- Department of Neural Dynamics and Magnetoencephalography, Hertie Institute for Clinical Brain Research, University of Tübingen, Germany; Centre for Integrative Neuroscience, University of Tübingen, Germany; MEG Center, University of Tübingen, Germany.
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34
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Jonikaitis D, Zhu S. Action space restructures visual working memory in prefrontal cortex. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.08.13.553135. [PMID: 37645942 PMCID: PMC10462047 DOI: 10.1101/2023.08.13.553135] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 08/31/2023]
Abstract
Visual working memory enables flexible behavior by decoupling sensory stimuli from behavioral actions. While previous studies have predominantly focused on the storage component of working memory, the role of future actions in shaping working memory remains unknown. To answer this question, we used two working memory tasks that allowed the dissociation of sensory and action components of working memory. We measured behavioral performance and neuronal activity in the macaque prefrontal cortex area, frontal eye fields. We show that the action space reshapes working memory, as evidenced by distinct patterns of memory tuning and attentional orienting between the two tasks. Notably, neuronal activity during the working memory period predicted future behavior and exhibited mixed selectivity in relation to the sensory space but linear selectivity relative to the action space. This linear selectivity was achieved through the rapid transformation from sensory to action space and was subsequently maintained as a stable cross-temporal population activity pattern. Combined, we provide direct physiological evidence of the action-oriented nature of frontal eye field neurons during memory tasks and demonstrate that the anticipation of behavioral outcomes plays a significant role in transforming and maintaining the contents of visual working memory.
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35
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Genkin M, Shenoy KV, Chandrasekaran C, Engel TA. The dynamics and geometry of choice in premotor cortex. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.07.22.550183. [PMID: 37546748 PMCID: PMC10401920 DOI: 10.1101/2023.07.22.550183] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 08/08/2023]
Abstract
The brain represents sensory variables in the coordinated activity of neural populations, in which tuning curves of single neurons define the geometry of the population code. Whether the same coding principle holds for dynamic cognitive variables remains unknown because internal cognitive processes unfold with a unique time course on single trials observed only in the irregular spiking of heterogeneous neural populations. Here we show the existence of such a population code for the dynamics of choice formation in the primate premotor cortex. We developed an approach to simultaneously infer population dynamics and tuning functions of single neurons to the population state. Applied to spike data recorded during decision-making, our model revealed that populations of neurons encoded the same dynamic variable predicting choices, and heterogeneous firing rates resulted from the diverse tuning of single neurons to this decision variable. The inferred dynamics indicated an attractor mechanism for decision computation. Our results reveal a common geometric principle for neural encoding of sensory and dynamic cognitive variables.
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Affiliation(s)
| | - Krishna V Shenoy
- Howard Hughes Medical Institute, Stanford University, Stanford, CA
- Department of Electrical Engineering, Stanford University, Stanford, CA
| | - Chandramouli Chandrasekaran
- Department of Anatomy & Neurobiology, Boston University, Boston, MA
- Department of Psychological and Brain Sciences, Boston University, Boston, MA
- Center for Systems Neuroscience, Boston University, Boston, MA
| | - Tatiana A Engel
- Cold Spring Harbor Laboratory, Cold Spring Harbor, NY
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ
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36
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Heusser MR, Jagadisan UK, Gandhi NJ. Drifting population dynamics with transient resets characterize sensorimotor transformation in the monkey superior colliculus. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.01.03.522634. [PMID: 36711849 PMCID: PMC9881850 DOI: 10.1101/2023.01.03.522634] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Abstract
To produce goal-directed eye movements known as saccades, we must channel sensory input from our environment through a process known as sensorimotor transformation. The behavioral output of this phenomenon (an accurate eye movement) is straightforward, but the coordinated activity of neurons underlying its dynamics is not well understood. We searched for a neural correlate of sensorimotor transformation in the activity patterns of simultaneously recorded neurons in the superior colliculus (SC) of three male rhesus monkeys performing a visually guided, delayed saccade task. Neurons in the intermediate layers produce a burst of spikes both following the appearance of a visual (sensory) stimulus and preceding an eye movement command, but many also exhibit a sustained activity level during the intervening time ("delay period"). This sustained activity could be representative of visual processing or motor preparation, along with countless cognitive processes. Using a novel measure we call the Visuomotor Proximity Index (VMPI), we pitted visual and motor signals against each other by measuring the degree to which each session's population activity (as summarized in a low-dimensional framework) could be considered more visual-like or more motor-like. The analysis highlighted two salient features of sensorimotor transformation. One, population activity on average drifted systematically toward a motor-like representation and intermittently reverted to a visual-like representation following a microsaccade. Two, activity patterns that drift to a stronger motor-like representation by the end of the delay period may enable a more rapid initiation of a saccade, substantiating the idea that this movement initiation mechanism is conserved across motor systems.
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Affiliation(s)
- Michelle R Heusser
- Department of Bioengineering, University of Pittsburgh, Pittsburgh, PA, USA
- Center for the Neural Basis of Cognition, University of Pittsburgh, Pittsburgh, PA, USA
| | - Uday K Jagadisan
- Department of Bioengineering, University of Pittsburgh, Pittsburgh, PA, USA
- Center for the Neural Basis of Cognition, University of Pittsburgh, Pittsburgh, PA, USA
| | - Neeraj J Gandhi
- Department of Bioengineering, University of Pittsburgh, Pittsburgh, PA, USA
- Department of Neuroscience, University of Pittsburgh, Pittsburgh, PA, USA
- Center for the Neural Basis of Cognition, University of Pittsburgh, Pittsburgh, PA, USA
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37
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Langdon C, Genkin M, Engel TA. A unifying perspective on neural manifolds and circuits for cognition. Nat Rev Neurosci 2023; 24:363-377. [PMID: 37055616 PMCID: PMC11058347 DOI: 10.1038/s41583-023-00693-x] [Citation(s) in RCA: 59] [Impact Index Per Article: 29.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 03/06/2023] [Indexed: 04/15/2023]
Abstract
Two different perspectives have informed efforts to explain the link between the brain and behaviour. One approach seeks to identify neural circuit elements that carry out specific functions, emphasizing connectivity between neurons as a substrate for neural computations. Another approach centres on neural manifolds - low-dimensional representations of behavioural signals in neural population activity - and suggests that neural computations are realized by emergent dynamics. Although manifolds reveal an interpretable structure in heterogeneous neuronal activity, finding the corresponding structure in connectivity remains a challenge. We highlight examples in which establishing the correspondence between low-dimensional activity and connectivity has been possible, unifying the neural manifold and circuit perspectives. This relationship is conspicuous in systems in which the geometry of neural responses mirrors their spatial layout in the brain, such as the fly navigational system. Furthermore, we describe evidence that, in systems in which neural responses are heterogeneous, the circuit comprises interactions between activity patterns on the manifold via low-rank connectivity. We suggest that unifying the manifold and circuit approaches is important if we are to be able to causally test theories about the neural computations that underlie behaviour.
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Affiliation(s)
- Christopher Langdon
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA
- Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA
| | - Mikhail Genkin
- Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA
| | - Tatiana A Engel
- Princeton Neuroscience Institute, Princeton University, Princeton, NJ, USA.
- Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA.
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Domanski APF, Kucewicz MT, Russo E, Tricklebank MD, Robinson ESJ, Durstewitz D, Jones MW. Distinct hippocampal-prefrontal neural assemblies coordinate memory encoding, maintenance, and recall. Curr Biol 2023; 33:1220-1236.e4. [PMID: 36898372 PMCID: PMC10728550 DOI: 10.1016/j.cub.2023.02.029] [Citation(s) in RCA: 17] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/20/2022] [Revised: 01/05/2023] [Accepted: 02/08/2023] [Indexed: 03/11/2023]
Abstract
Short-term memory enables incorporation of recent experience into subsequent decision-making. This processing recruits both the prefrontal cortex and hippocampus, where neurons encode task cues, rules, and outcomes. However, precisely which information is carried when, and by which neurons, remains unclear. Using population decoding of activity in rat medial prefrontal cortex (mPFC) and dorsal hippocampal CA1, we confirm that mPFC populations lead in maintaining sample information across delays of an operant non-match to sample task, despite individual neurons firing only transiently. During sample encoding, distinct mPFC subpopulations joined distributed CA1-mPFC cell assemblies hallmarked by 4-5 Hz rhythmic modulation; CA1-mPFC assemblies re-emerged during choice episodes but were not 4-5 Hz modulated. Delay-dependent errors arose when attenuated rhythmic assembly activity heralded collapse of sustained mPFC encoding. Our results map component processes of memory-guided decisions onto heterogeneous CA1-mPFC subpopulations and the dynamics of physiologically distinct, distributed cell assemblies.
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Affiliation(s)
- Aleksander P F Domanski
- School of Physiology, Pharmacology & Neuroscience, Faculty of Life Sciences, University of Bristol, University Walk, Bristol BS8 1TD, UK; The Alan Turing Institute, British Library, 96 Euston Rd, London, UK; The Francis Crick Institute, 1 Midland Road, London, UK
| | - Michal T Kucewicz
- School of Physiology, Pharmacology & Neuroscience, Faculty of Life Sciences, University of Bristol, University Walk, Bristol BS8 1TD, UK; BioTechMed Center, Brain & Mind Electrophysiology Laboratory, Multimedia Systems Department, Faculty of Electronics, Telecommunications and Informatics, Gdansk University of Technology, 80-233 Gdansk, Poland.
| | - Eleonora Russo
- Department of Theoretical Neuroscience, Central Institute of Mental Health, Medical Faculty Mannheim, Heidelberg University, 68159 Mannheim, Germany; Department of Psychiatry and Psychotherapy, University Medical Center, Johannes Gutenberg University, 55131 Mainz, Germany
| | - Mark D Tricklebank
- Centre for Neuroimaging Science, King's College London, Denmark Hill, London SE5 8AF, UK
| | - Emma S J Robinson
- School of Physiology, Pharmacology & Neuroscience, Faculty of Life Sciences, University of Bristol, University Walk, Bristol BS8 1TD, UK
| | - Daniel Durstewitz
- Department of Theoretical Neuroscience, Central Institute of Mental Health, Medical Faculty Mannheim, Heidelberg University, 68159 Mannheim, Germany
| | - Matt W Jones
- School of Physiology, Pharmacology & Neuroscience, Faculty of Life Sciences, University of Bristol, University Walk, Bristol BS8 1TD, UK
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39
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Manea AMG, Zilverstand A, Hayden B, Zimmermann J. Neural timescales reflect behavioral demands in freely moving rhesus macaques. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.03.27.534470. [PMID: 37034608 PMCID: PMC10081241 DOI: 10.1101/2023.03.27.534470] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 04/22/2023]
Abstract
Previous work has demonstrated remarkably reproducible and consistent hierarchies of neural timescales across cortical areas at rest. The question arises how such stable hierarchies give rise to adaptive behavior that requires flexible adjustment of temporal coding and integration demands. Potentially, this previously found lack of variability in the hierarchical organization of neural timescales could be a reflection of the structure of the laboratory contexts in which they were measured. Indeed, computational work demonstrates the existence of multiple temporal hierarchies within the same anatomical network when the input structure is altered. We posit that unconstrained behavioral environments where relatively little temporal demands are imposed from the experimenter are an ideal test bed to address the question of whether the hierarchical organization and the magnitude of neural timescales reflect ongoing behavioral demands. To tackle this question, we measured timescales of local field potential activity while rhesus macaques were foraging freely in a large open space. We find a hierarchy of neural timescales that is unique to this foraging environment. Importantly, although the magnitude of neural timescales generally expanded with task engagement, the brain areas' relative position in the hierarchy was stable across the recording sessions. Notably, the magnitude of neural timescales monotonically expanded with task engagement across a relatively long temporal scale spanning the duration of the recording session. Over shorter temporal scales, the magnitude of neural timescales changed dynamically around foraging events. Moreover, the change in the magnitude of neural timescales contained functionally relevant information, differentiating between seemingly similar events in terms of motor demands and associated reward. That is, the patterns of change were associated with the cognitive and behavioral meaning of these events. Finally, we demonstrated that brain areas were differentially affected by these behavioral demands - i.e., the expansion of neural timescales was not the same across all areas. Together, these results demonstrate that the observed hierarchy of neural timescales is context-dependent and that changes in the magnitude of neural timescales are closely related to overall task engagement and behavioral demands.
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Affiliation(s)
- Ana M G Manea
- Department of Neuroscience, University of Minnesota, Minneapolis MN
- Center for Magnetic Resonance Research, University of Minnesota, Minneapolis MN
| | - Anna Zilverstand
- Department of Psychiatry and Behavioral Sciences, University of Minnesota, Minneapolis MN
| | - Benjamin Hayden
- Department of Neurosurgery, Baylor College of Medicine, Houston, TX
| | - Jan Zimmermann
- Department of Neuroscience, University of Minnesota, Minneapolis MN
- Center for Magnetic Resonance Research, University of Minnesota, Minneapolis MN
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40
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Kadohisa M, Kusunoki M, Mitchell DJ, Bhatia C, Buckley MJ, Duncan J. Frontal and temporal coding dynamics in successive steps of complex behavior. Neuron 2023; 111:430-443.e3. [PMID: 36473483 DOI: 10.1016/j.neuron.2022.11.004] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2022] [Revised: 06/21/2022] [Accepted: 11/03/2022] [Indexed: 12/12/2022]
Abstract
Ventrolateral prefrontal cortex (vlPFC), dorsolateral prefrontal cortex (dlPFC), and temporal cortex (TE) all contribute to visual decision-making. Accumulating evidence suggests that vlPFC may play a central role in multiple cognitive operations, perhaps resembling domain-general regions of the human frontal lobe. We trained monkeys in a task calling for learning, retrieval, and spatial selection of rewarded target objects. Recordings of neural activity covered large areas of vlPFC, dlPFC, and TE. Results suggested a central role for vlPFC in each cognitive operation with strong coding of each task feature, while only location was strongly coded in dlPFC and current object identity in TE. During target selection, target location was communicated first from vlPFC to dlPFC, followed by extensive mutual support. In vlPFC, stimulus identities were independently coded in different task operations. The results suggest a central role for the inferior frontal convexity in controlling successive operations of a complex, multi-step task.
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Affiliation(s)
- Mikiko Kadohisa
- MRC Cognition and Brain Sciences Unit, University of Cambridge, 15 Chaucer Road, Cambridge CB2 7EF, UK; Department of Experimental Psychology, University of Oxford, Anna Watts Building, Radcliffe Observatory Quarter, Woodstock Road, Oxford OX2 6GG, UK
| | - Makoto Kusunoki
- MRC Cognition and Brain Sciences Unit, University of Cambridge, 15 Chaucer Road, Cambridge CB2 7EF, UK; Department of Experimental Psychology, University of Oxford, Anna Watts Building, Radcliffe Observatory Quarter, Woodstock Road, Oxford OX2 6GG, UK
| | - Daniel J Mitchell
- MRC Cognition and Brain Sciences Unit, University of Cambridge, 15 Chaucer Road, Cambridge CB2 7EF, UK
| | - Cheshta Bhatia
- Department of Organismic and Evolutionary Biology, Harvard University, 26 Oxford St, Cambridge, MA 02138, USA
| | - Mark J Buckley
- Department of Experimental Psychology, University of Oxford, Anna Watts Building, Radcliffe Observatory Quarter, Woodstock Road, Oxford OX2 6GG, UK
| | - John Duncan
- MRC Cognition and Brain Sciences Unit, University of Cambridge, 15 Chaucer Road, Cambridge CB2 7EF, UK; Department of Experimental Psychology, University of Oxford, Anna Watts Building, Radcliffe Observatory Quarter, Woodstock Road, Oxford OX2 6GG, UK.
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41
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Christensen AJ, Ott T, Kepecs A. Cognition and the single neuron: How cell types construct the dynamic computations of frontal cortex. Curr Opin Neurobiol 2022; 77:102630. [PMID: 36209695 PMCID: PMC10375540 DOI: 10.1016/j.conb.2022.102630] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2022] [Revised: 08/18/2022] [Accepted: 08/23/2022] [Indexed: 01/10/2023]
Abstract
Frontal cortex is thought to underlie many advanced cognitive capacities, from self-control to long term planning. Reflecting these diverse demands, frontal neural activity is notoriously idiosyncratic, with tuning properties that are correlated with endless numbers of behavioral and task features. This menagerie of tuning has made it difficult to extract organizing principles that govern frontal neural activity. Here, we contrast two successful yet seemingly incompatible approaches that have begun to address this challenge. Inspired by the indecipherability of single-neuron tuning, the first approach casts frontal computations as dynamical trajectories traversed by arbitrary mixtures of neurons. The second approach, by contrast, attempts to explain the functional diversity of frontal activity with the biological diversity of cortical cell-types. Motivated by the recent discovery of functional clusters in frontal neurons, we propose a consilience between these population and cell-type-specific approaches to neural computations, advancing the conjecture that evolutionarily inherited cell-type constraints create the scaffold within which frontal population dynamics must operate.
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Affiliation(s)
- Amelia J Christensen
- Department of Neuroscience and Department of Psychiatry, Washington University in St. Louis, St. Louis, MO 63110, USA.
| | - Torben Ott
- Department of Neuroscience and Department of Psychiatry, Washington University in St. Louis, St. Louis, MO 63110, USA; Bernstein Center for Computational Neuroscience Berlin, Humboldt University of Berlin, Berlin, Germany.
| | - Adam Kepecs
- Department of Neuroscience and Department of Psychiatry, Washington University in St. Louis, St. Louis, MO 63110, USA.
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42
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Differences in temporal processing speeds between the right and left auditory cortex reflect the strength of recurrent synaptic connectivity. PLoS Biol 2022; 20:e3001803. [PMID: 36269764 PMCID: PMC9629599 DOI: 10.1371/journal.pbio.3001803] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2022] [Revised: 11/02/2022] [Accepted: 08/24/2022] [Indexed: 11/23/2022] Open
Abstract
Brain asymmetry in the sensitivity to spectrotemporal modulation is an established functional feature that underlies the perception of speech and music. The left auditory cortex (ACx) is believed to specialize in processing fast temporal components of speech sounds, and the right ACx slower components. However, the circuit features and neural computations behind these lateralized spectrotemporal processes are poorly understood. To answer these mechanistic questions we use mice, an animal model that captures some relevant features of human communication systems. In this study, we screened for circuit features that could subserve temporal integration differences between the left and right ACx. We mapped excitatory input to principal neurons in all cortical layers and found significantly stronger recurrent connections in the superficial layers of the right ACx compared to the left. We hypothesized that the underlying recurrent neural dynamics would exhibit differential characteristic timescales corresponding to their hemispheric specialization. To investigate, we recorded spike trains from awake mice and estimated the network time constants using a statistical method to combine evidence from multiple weak signal-to-noise ratio neurons. We found longer temporal integration windows in the superficial layers of the right ACx compared to the left as predicted by stronger recurrent excitation. Our study shows substantial evidence linking stronger recurrent synaptic connections to longer network timescales. These findings support speech processing theories that purport asymmetry in temporal integration is a crucial feature of lateralization in auditory processing.
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43
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Pittolo S, Yokoyama S, Willoughby DD, Taylor CR, Reitman ME, Tse V, Wu Z, Etchenique R, Li Y, Poskanzer KE. Dopamine activates astrocytes in prefrontal cortex via α1-adrenergic receptors. Cell Rep 2022; 40:111426. [PMID: 36170823 PMCID: PMC9555850 DOI: 10.1016/j.celrep.2022.111426] [Citation(s) in RCA: 36] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2021] [Revised: 07/19/2022] [Accepted: 09/08/2022] [Indexed: 12/31/2022] Open
Abstract
The prefrontal cortex (PFC) is a hub for cognitive control, and dopamine profoundly influences its functions. In other brain regions, astrocytes sense diverse neurotransmitters and neuromodulators and, in turn, orchestrate regulation of neuroactive substances. However, basic physiology of PFC astrocytes, including which neuromodulatory signals they respond to and how they contribute to PFC function, is unclear. Here, we characterize divergent signaling signatures in mouse astrocytes of the PFC and primary sensory cortex, which show differential responsiveness to locomotion. We find that PFC astrocytes express receptors for dopamine but are unresponsive through the Gs/Gi-cAMP pathway. Instead, fast calcium signals in PFC astrocytes are time locked to dopamine release and are mediated by α1-adrenergic receptors both ex vivo and in vivo. Further, we describe dopamine-triggered regulation of extracellular ATP at PFC astrocyte territories. Thus, we identify astrocytes as active players in dopaminergic signaling in the PFC, contributing to PFC function though neuromodulator receptor crosstalk. Pittolo et al. demonstrate that the neuromodulator dopamine targets astrocytes, a type of brain cell, via receptors specific to another neuromodulator—norepinephrine. This study provides groundwork on how dopamine affects non-neuronal brain cells and suggests that crosstalk between neuromodulatory pathways occurs in vivo, with possible clinical implications.
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Affiliation(s)
- Silvia Pittolo
- Department of Biochemistry & Biophysics, University of California, San Francisco, San Francisco, CA, USA
| | - Sae Yokoyama
- Department of Biochemistry & Biophysics, University of California, San Francisco, San Francisco, CA, USA
| | - Drew D Willoughby
- Department of Biochemistry & Biophysics, University of California, San Francisco, San Francisco, CA, USA; Neuroscience Graduate Program, University of California, San Francisco, San Francisco, CA, USA
| | - Charlotte R Taylor
- Department of Biochemistry & Biophysics, University of California, San Francisco, San Francisco, CA, USA; Neuroscience Graduate Program, University of California, San Francisco, San Francisco, CA, USA
| | - Michael E Reitman
- Department of Biochemistry & Biophysics, University of California, San Francisco, San Francisco, CA, USA; Neuroscience Graduate Program, University of California, San Francisco, San Francisco, CA, USA
| | - Vincent Tse
- Department of Biochemistry & Biophysics, University of California, San Francisco, San Francisco, CA, USA
| | - Zhaofa Wu
- State Key Laboratory of Membrane Biology, Peking University School of Life Sciences, Beijing 100871, China; Peking-Tsinghua Center for Life Sciences, Peking University, Beijing 100871, China
| | - Roberto Etchenique
- Departamento de Química Inorgánica, Analítica y Química Física, INQUIMAE, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, CONICET, Intendente Güiraldes 2160, Ciudad Universitaria, Pabellón 2, C1428EGA, Buenos Aires, Argentina
| | - Yulong Li
- State Key Laboratory of Membrane Biology, Peking University School of Life Sciences, Beijing 100871, China; Peking-Tsinghua Center for Life Sciences, Peking University, Beijing 100871, China
| | - Kira E Poskanzer
- Department of Biochemistry & Biophysics, University of California, San Francisco, San Francisco, CA, USA; Neuroscience Graduate Program, University of California, San Francisco, San Francisco, CA, USA; Kavli Institute for Fundamental Neuroscience, San Francisco, CA, USA.
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44
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Ehrlich DB, Murray JD. Geometry of neural computation unifies working memory and planning. Proc Natl Acad Sci U S A 2022; 119:e2115610119. [PMID: 36067286 PMCID: PMC9478653 DOI: 10.1073/pnas.2115610119] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Real-world tasks require coordination of working memory, decision-making, and planning, yet these cognitive functions have disproportionately been studied as independent modular processes in the brain. Here, we propose that contingency representations, defined as mappings for how future behaviors depend on upcoming events, can unify working memory and planning computations. We designed a task capable of disambiguating distinct types of representations. In task-optimized recurrent neural networks, we investigated possible circuit mechanisms for contingency representations and found that these representations can explain neurophysiological observations from the prefrontal cortex during working memory tasks. Our experiments revealed that human behavior is consistent with contingency representations and not with traditional sensory models of working memory. Finally, we generated falsifiable predictions for neural data to identify contingency representations in neural data and to dissociate different models of working memory. Our findings characterize a neural representational strategy that can unify working memory, planning, and context-dependent decision-making.
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Affiliation(s)
- Daniel B. Ehrlich
- aInterdepartmental Neuroscience Program, Yale University, New Haven, CT 06510
- bDepartment of Psychiatry, Yale University School of Medicine, New Haven, CT 06510
| | - John D. Murray
- aInterdepartmental Neuroscience Program, Yale University, New Haven, CT 06510
- bDepartment of Psychiatry, Yale University School of Medicine, New Haven, CT 06510
- 1To whom correspondence may be addressed.
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45
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Manneschi L, Gigante G, Vasilaki E, Del Giudice P. Signal neutrality, scalar property, and collapsing boundaries as consequences of a learned multi-timescale strategy. PLoS Comput Biol 2022; 18:e1009393. [PMID: 35930590 PMCID: PMC9462745 DOI: 10.1371/journal.pcbi.1009393] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2021] [Revised: 09/09/2022] [Accepted: 06/08/2022] [Indexed: 11/18/2022] Open
Abstract
We postulate that three fundamental elements underlie a decision making process: perception of time passing, information processing in multiple timescales and reward maximisation. We build a simple reinforcement learning agent upon these principles that we train on a random dot-like task. Our results, similar to the experimental data, demonstrate three emerging signatures. (1) signal neutrality: insensitivity to the signal coherence in the interval preceding the decision. (2) Scalar property: the mean of the response times varies widely for different signal coherences, yet the shape of the distributions stays almost unchanged. (3) Collapsing boundaries: the “effective” decision-making boundary changes over time in a manner reminiscent of the theoretical optimal. Removing the perception of time or the multiple timescales from the model does not preserve the distinguishing signatures. Our results suggest an alternative explanation for signal neutrality. We propose that it is not part of motor planning. It is part of the decision-making process and emerges from information processing on multiple timescales.
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Affiliation(s)
- Luca Manneschi
- Department of Computer Science, University of Sheffield, Sheffield, United Kingdom
- * E-mail:
| | - Guido Gigante
- Istituto Superiore di Sanità, Rome, Italy
- INFN, Sezione di Roma, Rome, Italy
| | - Eleni Vasilaki
- Department of Computer Science, University of Sheffield, Sheffield, United Kingdom
- Institute of Neuroinformatics, University of Zurich and ETH Zurich, Switzerland
| | - Paolo Del Giudice
- Istituto Superiore di Sanità, Rome, Italy
- INFN, Sezione di Roma, Rome, Italy
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46
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Voitov I, Mrsic-Flogel TD. Cortical feedback loops bind distributed representations of working memory. Nature 2022; 608:381-389. [PMID: 35896749 PMCID: PMC9365695 DOI: 10.1038/s41586-022-05014-3] [Citation(s) in RCA: 23] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2021] [Accepted: 06/22/2022] [Indexed: 11/16/2022]
Abstract
Working memory—the brain’s ability to internalize information and use it flexibly to guide behaviour—is an essential component of cognition. Although activity related to working memory has been observed in several brain regions1–3, how neural populations actually represent working memory4–7 and the mechanisms by which this activity is maintained8–12 remain unclear13–15. Here we describe the neural implementation of visual working memory in mice alternating between a delayed non-match-to-sample task and a simple discrimination task that does not require working memory but has identical stimulus, movement and reward statistics. Transient optogenetic inactivations revealed that distributed areas of the neocortex were required selectively for the maintenance of working memory. Population activity in visual area AM and premotor area M2 during the delay period was dominated by orderly low-dimensional dynamics16,17 that were, however, independent of working memory. Instead, working memory representations were embedded in high-dimensional population activity, present in both cortical areas, persisted throughout the inter-stimulus delay period, and predicted behavioural responses during the working memory task. To test whether the distributed nature of working memory was dependent on reciprocal interactions between cortical regions18–20, we silenced one cortical area (AM or M2) while recording the feedback it received from the other. Transient inactivation of either area led to the selective disruption of inter-areal communication of working memory. Therefore, reciprocally interconnected cortical areas maintain bound high-dimensional representations of working memory. Experiments in mice alternating between a visual working memory task and a task that is independent of working memory provide insight into the neural representation of working memory and the distributed nature of its maintenance.
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Affiliation(s)
- Ivan Voitov
- Sainsbury Wellcome Centre, University College London, London, UK. .,Biozentrum, University of Basel, Basel, Switzerland.
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47
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Abstract
The neocortex is a complex neurobiological system with many interacting regions. How these regions work together to subserve flexible behavior and cognition has become increasingly amenable to rigorous research. Here, I review recent experimental and theoretical work on the modus operandi of a multiregional cortex. These studies revealed several general principles for the neocortical interareal connectivity, low-dimensional macroscopic gradients of biological properties across cortical areas, and a hierarchy of timescales for information processing. Theoretical work suggests testable predictions regarding differential excitation and inhibition along feedforward and feedback pathways in the cortical hierarchy. Furthermore, modeling of distributed working memory and simple decision-making has given rise to a novel mathematical concept, dubbed bifurcation in space, that potentially explains how different cortical areas, with a canonical circuit organization but gradients of biological heterogeneities, are able to subserve their respective (e.g., sensory coding versus executive control) functions in a modularly organized brain.
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Affiliation(s)
- Xiao-Jing Wang
- Center for Neural Science, New York University, New York, NY, USA;
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48
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Fontanier V, Sarazin M, Stoll FM, Delord B, Procyk E. Inhibitory control of frontal metastability sets the temporal signature of cognition. eLife 2022; 11:63795. [PMID: 35635439 PMCID: PMC9200403 DOI: 10.7554/elife.63795] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/07/2020] [Accepted: 05/27/2022] [Indexed: 11/13/2022] Open
Abstract
Cortical dynamics are organized over multiple anatomical and temporal scales. The mechanistic origin of the temporal organization and its contribution to cognition remain unknown. Here we demonstrate the cause of this organization by studying a specific temporal signature (time constant and latency) of neural activity. In monkey frontal areas, recorded during flexible decisions, temporal signatures display specific area-dependent ranges, as well as anatomical and cell-type distributions. Moreover, temporal signatures are functionally adapted to behaviorally relevant timescales. Fine-grained biophysical network models, constrained to account for experimentally observed temporal signatures, reveal that after-hyperpolarization potassium and inhibitory GABA-B conductances critically determine areas' specificity. They mechanistically account for temporal signatures by organizing activity into metastable states, with inhibition controlling state stability and transitions. As predicted by models, state durations non-linearly scale with temporal signatures in monkey, matching behavioral timescales. Thus, local inhibitory-controlled metastability constitutes the dynamical core specifying the temporal organization of cognitive functions in frontal areas.
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Affiliation(s)
| | - Matthieu Sarazin
- Institute of Intelligent Systems and Robotics (ISIR) - UMR 7222, Sorbonne Université, CNRS, Paris, France
| | - Frederic M Stoll
- Nash Family Department of Neuroscience, Icahn School of Medicine at Mount Sinai, New York, United States
| | - Bruno Delord
- Institute of Intelligent Systems and Robotics (ISIR) - UMR 7222, Sorbonne Université, CNRS, Paris, France
| | - Emmanuel Procyk
- Stem Cell and Brain Research Institute U1208, Inserm, Lyon, France
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49
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Dang W, Li S, Pu S, Qi XL, Constantinidis C. More Prominent Nonlinear Mixed Selectivity in the Dorsolateral Prefrontal than Posterior Parietal Cortex. eNeuro 2022; 9:ENEURO.0517-21.2022. [PMID: 35422418 PMCID: PMC9045476 DOI: 10.1523/eneuro.0517-21.2022] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2021] [Revised: 04/05/2022] [Accepted: 04/07/2022] [Indexed: 11/30/2022] Open
Abstract
Neurons in the dorsolateral prefrontal cortex (dlPFC) and posterior parietal cortex (PPC) are activated by different cognitive tasks and respond differently to the same stimuli depending on task. The conjunctive representations of multiple tasks in nonlinear fashion in single neuron activity, is known as nonlinear mixed selectivity (NMS). Here, we compared NMS in a working memory task in areas 8a and 46 of the dlPFC and 7a and lateral intraparietal cortex (LIP) of the PPC in macaque monkeys. NMS neurons were more frequent in dlPFC than in PPC and this was attributed to more cells gaining selectivity in the course of a trial. Additionally, in our task, the subjects' behavioral performance improved within a behavioral session as they learned the session-specific statistics of the task. The magnitude of NMS in the dlPFC also increased as a function of time within a single session. On the other hand, we observed minimal rotation of population responses and no appreciable differences in NMS between correct and error trials in either area. Our results provide direct evidence demonstrating a specialization in NMS between dlPFC and PPC and reveal mechanisms of neural selectivity in areas recruited in working memory tasks.
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Affiliation(s)
- Wenhao Dang
- Department of Biomedical Engineering, Vanderbilt University, Nashville, TN 37235
| | - Sihai Li
- Department of Neurobiology, University of Chicago, Chicago, IL 60637
- Department of Neurobiology and Anatomy, Wake Forest School of Medicine, Winston-Salem, NC 27157
| | - Shusen Pu
- Department of Biomedical Engineering, Vanderbilt University, Nashville, TN 37235
| | - Xue-Lian Qi
- Department of Neurobiology and Anatomy, Wake Forest School of Medicine, Winston-Salem, NC 27157
| | - Christos Constantinidis
- Department of Biomedical Engineering, Vanderbilt University, Nashville, TN 37235
- Neuroscience Program, Vanderbilt University, Nashville, TN 37235
- Department of Ophthalmology and Visual Sciences, Vanderbilt University Medical Center, Nashville, TN 37232
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50
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Hattori R, Komiyama T. Context-dependent persistency as a coding mechanism for robust and widely distributed value coding. Neuron 2022; 110:502-515.e11. [PMID: 34818514 PMCID: PMC8813889 DOI: 10.1016/j.neuron.2021.11.001] [Citation(s) in RCA: 19] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2021] [Revised: 08/26/2021] [Accepted: 11/01/2021] [Indexed: 02/04/2023]
Abstract
Task-related information is widely distributed across the brain with different coding properties, such as persistency. We found in mice that coding persistency of action history and value was variable across areas, learning phases, and task context, with the highest persistency in the retrosplenial cortex of expert mice performing value-based decisions where history needs to be maintained across trials. Persistent coding also emerged in artificial networks trained to perform mouse-like reinforcement learning. Persistency allows temporally untangled value representations in neuronal manifolds where population activity exhibits cyclic trajectories that transition along the value axis after action outcomes, collectively forming cylindrical dynamics. Simulations indicated that untangled persistency facilitates robust value retrieval by downstream networks. Even leakage of persistently maintained value through non-specific connectivity could contribute to the brain-wide distributed value coding with different levels of persistency. These results reveal that context-dependent, untangled persistency facilitates reliable signal coding and its distribution across the brain.
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Affiliation(s)
- Ryoma Hattori
- Neurobiology Section, Center for Neural Circuits and Behavior, Department of Neurosciences, and Halıcıoğlu Data Science Institute, University of California San Diego, La Jolla, CA 90093, USA.
| | - Takaki Komiyama
- Neurobiology Section, Center for Neural Circuits and Behavior, Department of Neurosciences, and Halıcıoğlu Data Science Institute, University of California San Diego, La Jolla, CA 90093, USA.
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