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For: Lasker K, Boeynaems S, Lam V, Scholl D, Stainton E, Briner A, Jacquemyn M, Daelemans D, Deniz A, Villa E, Holehouse AS, Gitler AD, Shapiro L. The material properties of a bacterial-derived biomolecular condensate tune biological function in natural and synthetic systems. Nat Commun 2022;13:5643. [PMID: 36163138 PMCID: PMC9512792 DOI: 10.1038/s41467-022-33221-z] [Citation(s) in RCA: 65] [Impact Index Per Article: 21.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2022] [Accepted: 09/09/2022] [Indexed: 11/17/2022]  Open
Number Cited by Other Article(s)
1
Granik N, Goldberg S, Amit R. Formation of Polyphasic RNP Granules by Intrinsically Disordered Qβ Coat Proteins and Hairpin-Containing RNA. ACS Synth Biol 2025. [PMID: 40400233 DOI: 10.1021/acssynbio.4c00891] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/23/2025]
2
Ng TLC, Hoare MP, Maristany MJ, Wilde EJ, Sneideris T, Huertas J, Agbetiameh BK, Furukawa M, Joseph JA, Knowles TPJ, Collepardo-Guevara R, Itzhaki LS, Kumita JR. Tandem-repeat proteins introduce tuneable properties to engineered biomolecular condensates. Chem Sci 2025:d5sc00903k. [PMID: 40375868 PMCID: PMC12076082 DOI: 10.1039/d5sc00903k] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2025] [Accepted: 05/04/2025] [Indexed: 05/18/2025]  Open
3
Barros-Medina I, Robles-Ramos MÁ, Sobrinos-Sanguino M, Luque-Ortega JR, Alfonso C, Margolin W, Rivas G, Monterroso B, Zorrilla S. Evidence for biomolecular condensates formed by the Escherichia coli MatP protein in spatiotemporal regulation of the bacterial cell division cycle. Int J Biol Macromol 2025;309:142691. [PMID: 40174834 DOI: 10.1016/j.ijbiomac.2025.142691] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2025] [Revised: 03/18/2025] [Accepted: 03/29/2025] [Indexed: 04/04/2025]
4
André AA, Rehnberg N, Garg A, Kjærgaard M. Toward Design Principles for Biomolecular Condensates for Metabolic Pathways. Adv Biol (Weinh) 2025;9:e2400672. [PMID: 40195042 PMCID: PMC12078866 DOI: 10.1002/adbi.202400672] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2024] [Revised: 01/14/2025] [Indexed: 04/09/2025]
5
Rahman MM, Zamakhaeva S, Rush JS, Chaton CT, Kenner CW, Hla YM, Tsui HCT, Uversky VN, Winkler ME, Korotkov KV, Korotkova N. Glycosylation of serine/threonine-rich intrinsically disordered regions of membrane-associated proteins in streptococci. Nat Commun 2025;16:4011. [PMID: 40301326 PMCID: PMC12041528 DOI: 10.1038/s41467-025-58692-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2024] [Accepted: 03/31/2025] [Indexed: 05/01/2025]  Open
6
Sabari BR, Hyman AA, Hnisz D. Functional specificity in biomolecular condensates revealed by genetic complementation. Nat Rev Genet 2025;26:279-290. [PMID: 39433596 DOI: 10.1038/s41576-024-00780-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 09/05/2024] [Indexed: 10/23/2024]
7
Rahman MM, Zamakhaeva S, Rush JS, Chaton CT, Kenner CW, Hla YM, Tsui HCT, Uversky VN, Winkler ME, Korotkov KV, Korotkova N. Glycosylation of serine/threonine-rich intrinsically disordered regions of membrane-associated proteins in streptococci. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2025:2024.05.05.592596. [PMID: 38746434 PMCID: PMC11092751 DOI: 10.1101/2024.05.05.592596] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/16/2024]
8
Passos C, Tomares D, Yassine H, Schnorr W, Hunter H, Wolfe-Feichter HK, Velier J, Dzurik KG, Grillo J, Gega A, Saxena S, Schrader J, Childers WS. BR-Bodies Facilitate Adaptive Responses and Survival During Copper Stress in Caulobacter crescentus. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2025:2025.03.11.642215. [PMID: 40161778 PMCID: PMC11952403 DOI: 10.1101/2025.03.11.642215] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Indexed: 04/02/2025]
9
Chakravarti A, Joseph JA. Accurate prediction of thermoresponsive phase behavior of disordered proteins. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2025:2025.03.04.641540. [PMID: 40093057 PMCID: PMC11908177 DOI: 10.1101/2025.03.04.641540] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 03/19/2025]
10
Sanfeliu-Cerdán N, Krieg M. The mechanobiology of biomolecular condensates. BIOPHYSICS REVIEWS 2025;6:011310. [PMID: 40160200 PMCID: PMC11952833 DOI: 10.1063/5.0236610] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/01/2024] [Accepted: 02/10/2025] [Indexed: 04/02/2025]
11
Hess N, Joseph JA. Structured protein domains enter the spotlight: modulators of biomolecular condensate form and function. Trends Biochem Sci 2025;50:206-223. [PMID: 39827079 DOI: 10.1016/j.tibs.2024.12.008] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/12/2024] [Revised: 11/18/2024] [Accepted: 12/11/2024] [Indexed: 01/22/2025]
12
Racki LR, Freddolino L. Polyphosphate: The "Dark Matter" of Bacterial Chromatin Structure. Mol Microbiol 2025;123:279-293. [PMID: 39967274 PMCID: PMC11894788 DOI: 10.1111/mmi.15350] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/29/2024] [Revised: 01/29/2025] [Accepted: 01/31/2025] [Indexed: 02/20/2025]
13
Ji BT, Pan HT, Qian ZG, Xia XX. Programming biological communication between distinct membraneless compartments. Nat Chem Biol 2025:10.1038/s41589-025-01840-4. [PMID: 39910287 DOI: 10.1038/s41589-025-01840-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/25/2024] [Accepted: 01/09/2025] [Indexed: 02/07/2025]
14
Holehouse AS, Alberti S. Molecular determinants of condensate composition. Mol Cell 2025;85:290-308. [PMID: 39824169 PMCID: PMC11750178 DOI: 10.1016/j.molcel.2024.12.021] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2024] [Revised: 12/03/2024] [Accepted: 12/20/2024] [Indexed: 01/20/2025]
15
Galvanetto N, Ivanović MT, Del Grosso SA, Chowdhury A, Sottini A, Nettels D, Best RB, Schuler B. Mesoscale properties of biomolecular condensates emerging from protein chain dynamics. ARXIV 2025:arXiv:2407.19202v2. [PMID: 39398199 PMCID: PMC11468658] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Download PDF] [Subscribe] [Scholar Register] [Indexed: 10/15/2024]
16
Xu P, Schumacher D, Liu C, Harms A, Dickmanns M, Beck F, Plitzko JM, Baumeister W, Søgaard-Andersen L. In situ architecture of a nucleoid-associated biomolecular co-condensate that regulates bacterial cell division. Proc Natl Acad Sci U S A 2025;122:e2419610121. [PMID: 39739804 PMCID: PMC11725790 DOI: 10.1073/pnas.2419610121] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/24/2024] [Accepted: 11/22/2024] [Indexed: 01/02/2025]  Open
17
Yang X, Rocks JW, Jiang K, Walters AJ, Rai K, Liu J, Nguyen J, Olson SD, Mehta P, Collins JJ, Daringer NM, Bashor CJ. Engineering synthetic phosphorylation signaling networks in human cells. Science 2025;387:74-81. [PMID: 39745956 DOI: 10.1126/science.adm8485] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2023] [Accepted: 10/24/2024] [Indexed: 01/04/2025]
18
Huang X, Yang Y, Xu C. Biomolecular condensation programs floral transition to orchestrate flowering time and inflorescence architecture. THE NEW PHYTOLOGIST 2025;245:88-94. [PMID: 39425452 DOI: 10.1111/nph.20204] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/12/2024] [Accepted: 09/11/2024] [Indexed: 10/21/2024]
19
Scholl D, Boyd T, Latham AP, Salazar A, Khan A, Boeynaems S, Holehouse AS, Lander GC, Sali A, Park D, Deniz AA, Lasker K. Cellular Function of a Biomolecular Condensate Is Determined by Its Ultrastructure. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.12.27.630454. [PMID: 39763716 PMCID: PMC11703246 DOI: 10.1101/2024.12.27.630454] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 01/11/2025]
20
Gurunian A, Lasker K, Deniz AA. Biomolecular Condensates can Induce Local Membrane Potentials. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.12.27.630407. [PMID: 39763935 PMCID: PMC11703247 DOI: 10.1101/2024.12.27.630407] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 01/11/2025]
21
Wan L, Ke J, Zhu Y, Zhang W, Mu W. Recent advances in engineering synthetic biomolecular condensates. Biotechnol Adv 2024;77:108452. [PMID: 39271032 DOI: 10.1016/j.biotechadv.2024.108452] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2024] [Revised: 09/08/2024] [Accepted: 09/09/2024] [Indexed: 09/15/2024]
22
Dai Y, Wang ZG, Zare RN. Unlocking the electrochemical functions of biomolecular condensates. Nat Chem Biol 2024;20:1420-1433. [PMID: 39327453 DOI: 10.1038/s41589-024-01717-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2023] [Accepted: 08/01/2024] [Indexed: 09/28/2024]
23
Ahmed YM, Brown LM, Varga K, Bowman GR. Phospho-signaling couples polar asymmetry and proteolysis within a membraneless microdomain in Caulobacter crescentus. Nat Commun 2024;15:9282. [PMID: 39468040 PMCID: PMC11519897 DOI: 10.1038/s41467-024-53395-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2023] [Accepted: 10/09/2024] [Indexed: 10/30/2024]  Open
24
Favetta B, Wang H, Cubuk J, Barai M, Ramirez C, Gormley AJ, Murthy S, Soranno A, Shi Z, Schuster BS. Phosphorylation Toggles the SARS-CoV-2 Nucleocapsid Protein Between Two Membrane-Associated Condensate States. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.10.17.618867. [PMID: 39464032 PMCID: PMC11507936 DOI: 10.1101/2024.10.17.618867] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Indexed: 10/29/2024]
25
Dai Y, Zhou Z, Yu W, Ma Y, Kim K, Rivera N, Mohammed J, Lantelme E, Hsu-Kim H, Chilkoti A, You L. Biomolecular condensates regulate cellular electrochemical equilibria. Cell 2024;187:5951-5966.e18. [PMID: 39260373 PMCID: PMC11490381 DOI: 10.1016/j.cell.2024.08.018] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/20/2023] [Revised: 05/22/2024] [Accepted: 08/09/2024] [Indexed: 09/13/2024]
26
Barros-Medina I, Robles-Ramos MÁ, Sobrinos-Sanguino M, Luque-Ortega JR, Alfonso C, Margolin W, Rivas G, Monterroso B, Zorrilla S. Evidence for biomolecular condensates of MatP in spatiotemporal regulation of the bacterial cell division cycle. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.07.23.604758. [PMID: 39211257 PMCID: PMC11361077 DOI: 10.1101/2024.07.23.604758] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 09/04/2024]
27
Rizvi A, Favetta B, Jaber N, Lee YK, Jiang J, Idris NS, Schuster BS, Dai W, Patterson JP. Revealing nanoscale structure and interfaces of protein and polymer condensates via cryo-electron microscopy. NANOSCALE 2024;16:16706-16717. [PMID: 39171763 PMCID: PMC11392623 DOI: 10.1039/d4nr01877j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 08/23/2024]
28
Doan VS, Alshareedah I, Singh A, Banerjee PR, Shin S. Diffusiophoresis promotes phase separation and transport of biomolecular condensates. Nat Commun 2024;15:7686. [PMID: 39227569 PMCID: PMC11372141 DOI: 10.1038/s41467-024-51840-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2023] [Accepted: 08/16/2024] [Indexed: 09/05/2024]  Open
29
Wan L, Zhu Y, Ke J, Zhang W, Mu W. Compartmentalization of pathway sequential enzymes into synthetic protein compartments for metabolic flux optimization in Escherichia coli. Metab Eng 2024;85:167-179. [PMID: 39163974 DOI: 10.1016/j.ymben.2024.08.003] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/06/2024] [Revised: 05/24/2024] [Accepted: 08/17/2024] [Indexed: 08/22/2024]
30
Sasazawa M, Tomares DT, Childers WS, Saurabh S. Biomolecular condensates as stress sensors and modulators of bacterial signaling. PLoS Pathog 2024;20:e1012413. [PMID: 39146259 PMCID: PMC11326607 DOI: 10.1371/journal.ppat.1012413] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/17/2024]  Open
31
Wan L, Zhu Y, Zhang W, Mu W. Recent advances in design and application of synthetic membraneless organelles. Biotechnol Adv 2024;73:108355. [PMID: 38588907 DOI: 10.1016/j.biotechadv.2024.108355] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/12/2023] [Revised: 02/26/2024] [Accepted: 04/05/2024] [Indexed: 04/10/2024]
32
Payne-Dwyer A, Kumar G, Barrett J, Gherman LK, Hodgkinson M, Plevin M, Mackinder L, Leake MC, Schaefer C. Predicting Rubisco-Linker Condensation from Titration in the Dilute Phase. PHYSICAL REVIEW LETTERS 2024;132:218401. [PMID: 38856270 DOI: 10.1103/physrevlett.132.218401] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/30/2023] [Accepted: 04/09/2024] [Indexed: 06/11/2024]
33
Wang H, Liao S, Yu X, Zhang J, Zhou ZH. TomoNet: A streamlined cryogenic electron tomography software pipeline with automatic particle picking on flexible lattices. BIOLOGICAL IMAGING 2024;4:e7. [PMID: 38828212 PMCID: PMC11140495 DOI: 10.1017/s2633903x24000060] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/04/2023] [Revised: 03/04/2024] [Accepted: 03/25/2024] [Indexed: 06/05/2024]
34
Lee M, Moon HC, Jeong H, Kim DW, Park HY, Shin Y. Optogenetic control of mRNA condensation reveals an intimate link between condensate material properties and functions. Nat Commun 2024;15:3216. [PMID: 38622120 PMCID: PMC11018775 DOI: 10.1038/s41467-024-47442-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2023] [Accepted: 03/25/2024] [Indexed: 04/17/2024]  Open
35
Hoang Y, Azaldegui CA, Dow RE, Ghalmi M, Biteen JS, Vecchiarelli AG. An experimental framework to assess biomolecular condensates in bacteria. Nat Commun 2024;15:3222. [PMID: 38622124 PMCID: PMC11018776 DOI: 10.1038/s41467-024-47330-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/04/2023] [Accepted: 03/28/2024] [Indexed: 04/17/2024]  Open
36
Su J, Xu X, Cseke LJ, Whittier S, Zhou R, Zhang Z, Dietz Z, Singh K, Yang B, Chen SY, Picking W, Zou X, Gassmann W. Cell-specific polymerization-driven biomolecular condensate formation fine-tunes root tissue morphogenesis. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.04.02.587845. [PMID: 38617336 PMCID: PMC11014531 DOI: 10.1101/2024.04.02.587845] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/16/2024]
37
Sundaravadivelu Devarajan D, Wang J, Szała-Mendyk B, Rekhi S, Nikoubashman A, Kim YC, Mittal J. Sequence-dependent material properties of biomolecular condensates and their relation to dilute phase conformations. Nat Commun 2024;15:1912. [PMID: 38429263 PMCID: PMC10907393 DOI: 10.1038/s41467-024-46223-w] [Citation(s) in RCA: 35] [Impact Index Per Article: 35.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2023] [Accepted: 02/19/2024] [Indexed: 03/03/2024]  Open
38
Holehouse AS, Kragelund BB. The molecular basis for cellular function of intrinsically disordered protein regions. Nat Rev Mol Cell Biol 2024;25:187-211. [PMID: 37957331 PMCID: PMC11459374 DOI: 10.1038/s41580-023-00673-0] [Citation(s) in RCA: 175] [Impact Index Per Article: 175.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 09/26/2023] [Indexed: 11/15/2023]
39
Monterroso B, Margolin W, Boersma AJ, Rivas G, Poolman B, Zorrilla S. Macromolecular Crowding, Phase Separation, and Homeostasis in the Orchestration of Bacterial Cellular Functions. Chem Rev 2024;124:1899-1949. [PMID: 38331392 PMCID: PMC10906006 DOI: 10.1021/acs.chemrev.3c00622] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2023] [Revised: 12/01/2023] [Accepted: 01/10/2024] [Indexed: 02/10/2024]
40
Liu C, Mentzelopoulou A, Hatzianestis IH, Tzagkarakis E, Skaltsogiannis V, Ma X, Michalopoulou VA, Romero-Campero FJ, Romero-Losada AB, Sarris PF, Marhavy P, Bölter B, Kanterakis A, Gutierrez-Beltran E, Moschou PN. A proxitome-RNA-capture approach reveals that processing bodies repress coregulated hub genes. THE PLANT CELL 2024;36:559-584. [PMID: 37971938 PMCID: PMC10896293 DOI: 10.1093/plcell/koad288] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/26/2023] [Revised: 09/18/2023] [Accepted: 10/18/2023] [Indexed: 11/19/2023]
41
Doan VS, Alshareedah I, Singh A, Banerjee PR, Shin S. Diffusiophoresis promotes phase separation and transport of biomolecular condensates. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2023.07.03.547532. [PMID: 37461689 PMCID: PMC10350024 DOI: 10.1101/2023.07.03.547532] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 07/25/2023]
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Devarajan DS, Wang J, Szała-Mendyk B, Rekhi S, Nikoubashman A, Kim YC, Mittal J. Sequence-Dependent Material Properties of Biomolecular Codensates and their Relation to Dilute Phase Conformations. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2023.05.09.540038. [PMID: 37215004 PMCID: PMC10197689 DOI: 10.1101/2023.05.09.540038] [Citation(s) in RCA: 7] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
43
Chong TN, Panjalingam M, Saurabh S, Shapiro L. Phosphatase to kinase switch of a critical enzyme contributes to timing of cell differentiation. mBio 2024;15:e0212523. [PMID: 38055339 PMCID: PMC10790692 DOI: 10.1128/mbio.02125-23] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/08/2023] [Accepted: 10/20/2023] [Indexed: 12/08/2023]  Open
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Hilditch AT, Romanyuk A, Cross SJ, Obexer R, McManus JJ, Woolfson DN. Assembling membraneless organelles from de novo designed proteins. Nat Chem 2024;16:89-97. [PMID: 37710047 PMCID: PMC10774119 DOI: 10.1038/s41557-023-01321-y] [Citation(s) in RCA: 27] [Impact Index Per Article: 27.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/22/2022] [Accepted: 08/09/2023] [Indexed: 09/16/2023]
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Zhou P, Gao C, Song W, Wei W, Wu J, Liu L, Chen X. Engineering status of protein for improving microbial cell factories. Biotechnol Adv 2024;70:108282. [PMID: 37939975 DOI: 10.1016/j.biotechadv.2023.108282] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/12/2023] [Revised: 10/23/2023] [Accepted: 11/05/2023] [Indexed: 11/10/2023]
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Ramšak M, Ramirez DA, Hough LE, Shirts MR, Vidmar S, Eleršič Filipič K, Anderluh G, Jerala R. Programmable de novo designed coiled coil-mediated phase separation in mammalian cells. Nat Commun 2023;14:7973. [PMID: 38042897 PMCID: PMC10693550 DOI: 10.1038/s41467-023-43742-w] [Citation(s) in RCA: 13] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2023] [Accepted: 11/17/2023] [Indexed: 12/04/2023]  Open
47
Szoke T, Goldberger O, Albocher-Kedem N, Barsheshet M, Dezorella N, Nussbaum-Shochat A, Wiener R, Schuldiner M, Amster-Choder O. Regulation of major bacterial survival strategies by transcripts sequestration in a membraneless organelle. Cell Rep 2023;42:113393. [PMID: 37934665 DOI: 10.1016/j.celrep.2023.113393] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2023] [Revised: 08/10/2023] [Accepted: 10/20/2023] [Indexed: 11/09/2023]  Open
48
Dai Y, Zhou Z, Kim K, Rivera N, Mohammed J, Hsu-Kim H, Chilkoti A, You L. Global control of cellular physiology by biomolecular condensates through modulation of electrochemical equilibria. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.10.19.563018. [PMID: 37904914 PMCID: PMC10614965 DOI: 10.1101/2023.10.19.563018] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/01/2023]
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Hatzianestis IH, Mountourakis F, Stavridou S, Moschou PN. Plant condensates: no longer membrane-less? TRENDS IN PLANT SCIENCE 2023;28:1101-1112. [PMID: 37183142 DOI: 10.1016/j.tplants.2023.04.006] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/14/2022] [Revised: 04/12/2023] [Accepted: 04/18/2023] [Indexed: 05/16/2023]
50
Mukherjee S, Schäfer LV. Thermodynamic forces from protein and water govern condensate formation of an intrinsically disordered protein domain. Nat Commun 2023;14:5892. [PMID: 37735186 PMCID: PMC10514047 DOI: 10.1038/s41467-023-41586-y] [Citation(s) in RCA: 25] [Impact Index Per Article: 12.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2023] [Accepted: 09/08/2023] [Indexed: 09/23/2023]  Open
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