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Zaragoza N, Anderson GI, Allison-Logan S, Monir K, Furst AL. Novel delivery systems for controlled release of bacterial therapeutics. Trends Biotechnol 2024; 42:929-937. [PMID: 38310020 DOI: 10.1016/j.tibtech.2024.01.002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/13/2023] [Revised: 01/09/2024] [Accepted: 01/09/2024] [Indexed: 02/05/2024]
Abstract
As more is learned about the benefits of microbes, their potential to prevent and treat disease is expanding. Microbial therapeutics are less burdensome and costly to produce than traditional molecular drugs, often with superior efficacy. Yet, as with most medicines, controlled dosing and delivery to the area of need remain key challenges for microbes. Advances in materials to control small-molecule delivery are expected to translate to microbes, enabling similar control with equivalent benefits. In this perspective, recent advances in living biotherapeutics are discussed within the context of new methods for their controlled release. The integration of these advances provides a roadmap for the design, synthesis, and analysis of controlled microbial therapeutic delivery systems.
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Affiliation(s)
- Nadia Zaragoza
- Department of Chemical Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, USA
| | - Grace I Anderson
- Department of Chemical Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, USA
| | - Stephanie Allison-Logan
- Department of Chemical Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, USA
| | - Kirmina Monir
- Department of Chemical Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, USA
| | - Ariel L Furst
- Department of Chemical Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, USA; Center for Environmental Health Sciences, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.
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Weber MU, Petkowski JJ, Weber RE, Krajnik B, Stemplewski S, Panek M, Dziubak T, Mrozinska P, Piela A, Paluch E. Chip for dielectrophoretic microbial capture, separation and detection II: experimental study. NANOTECHNOLOGY 2023; 34:175502. [PMID: 36640445 DOI: 10.1088/1361-6528/acb321] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/22/2022] [Accepted: 01/13/2023] [Indexed: 06/17/2023]
Abstract
In our previous paper we have modelled a dielectrophoretic force (DEP) and cell particle behavior in a microfluidic channel (Weber MUet al2023 Chip for dielectrophoretic microbial capture, separation and detection I: theoretical basis of electrode designNanotechnologythis issue). Here we test and confirm the results of our modeling work by experimentally validating the theoretical design constraints of the ring electrode architecture. We have compared and tested the geometry and particle capture and separation performance of the two separate electrode designs (the ring and dot electrode structures) by investigating bacterial motion in response to the applied electric field. We have quantitatively evaluated the electroosmosis (EO) to positive DEP (PDEP) transition in both electrode designs and explained the differences in capture efficiency of the ring and dot electrode systems. The ring structure shows 99% efficiency of bacterial capture both for PDEP and for EO. Moreover, the ring structure shows an over 200 faster bacterial response to the electric field. We have also established that the ring electrode architecture, with appropriate structure periodicity and spacing, results in efficient capture and separation of microbial cells. We have identified several critical design constraints that are required to achieve high efficiency bacterial capture. We have established that the spacing between consecutive DEP traps smaller than the length of the depletion zone will ensure that the DEP force dominates bacterial motion over motility and Brownian motion.
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Affiliation(s)
- Monika U Weber
- Departments of Electrical Engineering and Applied Physics, Yale University, 15 Prospect St., New Haven, CT 06520, United States of America
- Hener, Wrocław Technology Park, BETA Building, Room 104, Klecińska 125, 54-413, Wrocław, Poland
| | | | - Robert E Weber
- Hener, Wrocław Technology Park, BETA Building, Room 104, Klecińska 125, 54-413, Wrocław, Poland
| | - Bartosz Krajnik
- Hener, Wrocław Technology Park, BETA Building, Room 104, Klecińska 125, 54-413, Wrocław, Poland
- Department of Experimental Physics, Wroclaw University of Science and Technology, Wyb. S. Wyspianskiego 27, 50-370 Wroclaw, Poland
| | - Slawomir Stemplewski
- Hener, Wrocław Technology Park, BETA Building, Room 104, Klecińska 125, 54-413, Wrocław, Poland
- Institute of Computer Science, Opole University, ul. Oleska 48, 45-052, Opole, Poland
| | - Marta Panek
- Hener, Wrocław Technology Park, BETA Building, Room 104, Klecińska 125, 54-413, Wrocław, Poland
| | - Tomasz Dziubak
- Hener, Wrocław Technology Park, BETA Building, Room 104, Klecińska 125, 54-413, Wrocław, Poland
| | - Paulina Mrozinska
- Hener, Wrocław Technology Park, BETA Building, Room 104, Klecińska 125, 54-413, Wrocław, Poland
| | - Anna Piela
- Hener, Wrocław Technology Park, BETA Building, Room 104, Klecińska 125, 54-413, Wrocław, Poland
| | - Emil Paluch
- Hener, Wrocław Technology Park, BETA Building, Room 104, Klecińska 125, 54-413, Wrocław, Poland
- Department of Microbiology, Faculty of Medicine, Wroclaw Medical University, Tytusa Chałubińskiego 4, 50-376 Wrocław, Poland
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Weber MU, Petkowski JJ, Weber RE, Krajnik B, Stemplewski S, Panek M, Dziubak T, Mrozinska P, Piela A, Lo SL, Montanaro Ochoa HF, Yerino CD. Chip for dielectrophoretic microbial capture, separation and detection I: theoretical basis of electrode design. NANOTECHNOLOGY 2023; 34:135502. [PMID: 36571849 DOI: 10.1088/1361-6528/acae5c] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/22/2022] [Accepted: 12/25/2022] [Indexed: 06/17/2023]
Abstract
We model the dielectrophoretic response ofE. colibacterial cells and red blood cells, upon exposure to an electric field. We model the separation, capture, and release mechanisms under flow conditions in a microfluidic channel and show under which conditions efficient separation of different cell types occurs. The modelling work is aimed to guide the separation electrode architecture and design for experimental validation of the model. The dielectrophoretic force is affected both by the geometry of the electrodes (the gradient of the electric field), the Re{CM(ω)} factor, and the permittivity of the medium ϵm. Our modelling makes testable predictions and shows that designing the electrode structure to ensure structure periodicity with spacing between consecutive traps smaller than the length of the depletion zone ensures efficient capture and separation. Such electrode system has higher capture and separation efficiency than systems with the established circular electrode architecture. The simulated, modelled microfluidic design allows for the separated bacteria, concentrated by dedicated dielectrophoretic regions, to be subsequently detected using label-free functionalized nanowire sensors. The experimental validation of the modelling work presented here and the validation of the theoretical design constraints of the chip electrode architecture is presented in the companion paper in the same issue (Weber MUet al2022 Chip for dielectrophoretic Microbial Capture, Separation and Detection II: Experimental Study).
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Affiliation(s)
- Monika U Weber
- Departments of Electrical Engineering and Applied Physics, Yale University, 15 Prospect St., 06520 New Haven, CT, United States of America
- Hener, Wrocław Technology Park, BETA Building, Room 104, Klecińska 125, 54-413, Wrocław, Poland
| | | | - Robert E Weber
- Hener, Wrocław Technology Park, BETA Building, Room 104, Klecińska 125, 54-413, Wrocław, Poland
| | - Bartosz Krajnik
- Hener, Wrocław Technology Park, BETA Building, Room 104, Klecińska 125, 54-413, Wrocław, Poland
- Department of Experimental Physics, Wroclaw University of Science and Technology, Wyb. S. Wyspianskiego 27, 50-370 Wroclaw, Poland
| | - Slawomir Stemplewski
- Hener, Wrocław Technology Park, BETA Building, Room 104, Klecińska 125, 54-413, Wrocław, Poland
- Institute of Computer Science, Opole University, ul. Oleska 48, 45-052, Opole, Poland
| | - Marta Panek
- Hener, Wrocław Technology Park, BETA Building, Room 104, Klecińska 125, 54-413, Wrocław, Poland
| | - Tomasz Dziubak
- Hener, Wrocław Technology Park, BETA Building, Room 104, Klecińska 125, 54-413, Wrocław, Poland
| | - Paulina Mrozinska
- Hener, Wrocław Technology Park, BETA Building, Room 104, Klecińska 125, 54-413, Wrocław, Poland
| | - Anna Piela
- Hener, Wrocław Technology Park, BETA Building, Room 104, Klecińska 125, 54-413, Wrocław, Poland
| | - Siu Lung Lo
- Departments of Electrical Engineering and Applied Physics, Yale University, 15 Prospect St., 06520 New Haven, CT, United States of America
| | - Hazael F Montanaro Ochoa
- Departments of Electrical Engineering and Applied Physics, Yale University, 15 Prospect St., 06520 New Haven, CT, United States of America
- Laboratory for Acoustics and Noise control, Empa, Swiss Federal Laboratories for Materials Science and Technology, Dubendorf, Switzerland
| | - Christopher D Yerino
- Departments of Electrical Engineering and Applied Physics, Yale University, 15 Prospect St., 06520 New Haven, CT, United States of America
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Zeid AM, Abdussalam A, Hanif S, Anjum S, Lou B, Xu G. Recent advances in microchip electrophoresis for analysis of pathogenic bacteria and viruses. Electrophoresis 2023; 44:15-34. [PMID: 35689426 DOI: 10.1002/elps.202200082] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/01/2022] [Revised: 05/31/2022] [Accepted: 06/07/2022] [Indexed: 02/01/2023]
Abstract
Life-threatening diseases, such as hepatitis B, pneumonia, tuberculosis, and COVID-19, are widespread due to pathogenic bacteria and viruses. Therefore, the development of highly sensitive, rapid, portable, cost-effective, and selective methods for the analysis of such microorganisms is a great challenge. Microchip electrophoresis (ME) has been widely used in recent years for the analysis of bacterial and viral pathogens in biological and environmental samples owing to its portability, simplicity, cost-effectiveness, and rapid analysis. However, microbial enrichment and purification are critical steps for accurate and sensitive analysis of pathogenic bacteria and viruses in complex matrices. Therefore, we first discussed the advances in the sample preparation technologies associated with the accurate analysis of such microorganisms, especially the on-chip microfluidic-based sample preparations such as dielectrophoresis and microfluidic membrane filtration. Thereafter, we focused on the recent advances in the lab-on-a-chip electrophoretic analysis of pathogenic bacteria and viruses in different complex matrices. As the microbial analysis is mainly based on the analysis of nucleic acid of the microorganism, the integration of nucleic acid-based amplification techniques such as polymerase chain reaction (PCR), quantitative PCR, and multiplex PCR with ME will result in an accurate and sensitive analysis of microbial pathogens. Such analyses are very important for the point-of-care diagnosis of various infectious diseases.
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Affiliation(s)
- Abdallah M Zeid
- State Key Laboratory of Electroanalytical Chemistry, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, Changchun, Jilin, P. R. China.,Department of Pharmaceutical Analytical Chemistry, Faculty of Pharmacy, Mansoura University, Mansoura, Egypt
| | - Abubakar Abdussalam
- State Key Laboratory of Electroanalytical Chemistry, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, Changchun, Jilin, P. R. China.,College of Natural and Pharmaceutical Sciences, Department of Chemistry, Bayero University, Kano, Nigeria.,School of Applied Chemistry and Engineering, University of Science and Technology of China, Hefei, Anhui, P. R. China
| | - Saima Hanif
- Department of Biological Sciences, National University of Medical Sciences (NUMS), Punjab, Pakistan
| | - Saima Anjum
- Department of Chemistry, Govt. Sadiq College Women University, Bahawalpur, Pakistan
| | - Baohua Lou
- State Key Laboratory of Electroanalytical Chemistry, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, Changchun, Jilin, P. R. China.,School of Applied Chemistry and Engineering, University of Science and Technology of China, Hefei, Anhui, P. R. China
| | - Guobao Xu
- State Key Laboratory of Electroanalytical Chemistry, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, Changchun, Jilin, P. R. China.,School of Applied Chemistry and Engineering, University of Science and Technology of China, Hefei, Anhui, P. R. China
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Abstract
Finding evidence of extraterrestrial life would be one of the most profound scientific discoveries ever made, advancing humanity into a new epoch of cosmic awareness. The Venus Life Finder (VLF) missions feature a series of three direct atmospheric probes designed to assess the habitability of the Venusian clouds and search for signs of life and life itself. The VLF missions are an astrobiology-focused set of missions, and the first two out of three can be launched quickly and at a relatively low cost. The mission concepts come out of an 18-month study by an MIT-led worldwide consortium.
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A two-phase and long-lasting multi-antibacterial coating enables titanium biomaterials to prevent implants-related infections. Mater Today Bio 2022; 15:100330. [PMID: 35789634 PMCID: PMC9250043 DOI: 10.1016/j.mtbio.2022.100330] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2022] [Revised: 06/10/2022] [Accepted: 06/11/2022] [Indexed: 01/08/2023] Open
Abstract
In clinical work, the main challenges for titanium (Ti) implantation are bacterial infection and aseptic loosening, which severely affect the survival rate of implants. The first 4 weeks post-operation is the infection peak phase of implants. Inhibiting implant infection caused by bacteria adhesion and proliferation during the early phase as well as promoting subsequent osteointegration is essential for implant success. Herein, we constructed a quaternary ammonium carboxymethyl chitosan (QCMC), collagen (COL Ⅰ) and hydroxyapatite (HAP) multilayers coating on Ti substrates via a modified layer-by-layer (LBL) technique and polymerization of dopamine. The QCMC/COL/HAP coating exhibited a multi-antibacterial property with a two-phase function: (1) At the first 4 weeks post-operation, the covalently bonded QCMC could be slowly degraded and demonstrated both contact-killing and release-killing properties during the infection peak phase; (2) At the second phase, osteogenesis and osseointegration-promotion capabilities were enhanced by HAP under the effective control of infection. The multifilm coating was degraded for more than 45 days under the action of collagenase Ⅰ, and displayed good biocompatibility in vivo and in vitro. Most importantly, the coating exhibited a long-lasting antibacterial activity for more than 3 months, against the main pathogenic bacteria of peri-implant infections. Both in vitro studies and in vivo animal models revealed a desirable osteogenic differentiation capacity of Ti-CCH. Therefore, our study reports a two-phase, long-lasting multi-antibacterial coating on Ti-CCH and indicates potential applications of the modified LBL strategy in orthopaedic fields, which is enlightening for developing practical implant and scaffold materials. Developing a QCMC/COL/HAP multifilm coating via modified layer-by-layer technique and self-polymerization of dopamine. The QCMC/COL/HAP coating exhibited desirable mechanical properties and excellent biocompatibility. The release kinetics endowed the QCMC/COL/HAP coating with multi-antibacterial activity at the first phase after operation. The QCMC/COL/HAP coating could improve osseointegration at the second phase of post-operation.
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Rebrosova K, Samek O, Kizovsky M, Bernatova S, Hola V, Ruzicka F. Raman Spectroscopy-A Novel Method for Identification and Characterization of Microbes on a Single-Cell Level in Clinical Settings. Front Cell Infect Microbiol 2022; 12:866463. [PMID: 35531343 PMCID: PMC9072635 DOI: 10.3389/fcimb.2022.866463] [Citation(s) in RCA: 25] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2022] [Accepted: 03/07/2022] [Indexed: 12/02/2022] Open
Abstract
Rapid and accurate identification of pathogens causing infections is one of the biggest challenges in medicine. Timely identification of causative agents and their antimicrobial resistance profile can significantly improve the management of infection, lower costs for healthcare, mitigate ever-growing antimicrobial resistance and in many cases, save lives. Raman spectroscopy was shown to be a useful-quick, non-invasive, and non-destructive -tool for identifying microbes from solid and liquid media. Modifications of Raman spectroscopy and/or pretreatment of samples allow single-cell analyses and identification of microbes from various samples. It was shown that those non-culture-based approaches could also detect antimicrobial resistance. Moreover, recent studies suggest that a combination of Raman spectroscopy with optical tweezers has the potential to identify microbes directly from human body fluids. This review aims to summarize recent advances in non-culture-based approaches of identification of microbes and their virulence factors, including antimicrobial resistance, using methods based on Raman spectroscopy in the context of possible use in the future point-of-care diagnostic process.
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Affiliation(s)
- Katarina Rebrosova
- Department of Microbiology, Faculty of Medicine of Masaryk University and St. Anne’s University Hospital, Brno, Czechia
| | - Ota Samek
- Institute of Scientific Instruments of the Czech Academy of Sciences, Brno, Czechia
| | - Martin Kizovsky
- Institute of Scientific Instruments of the Czech Academy of Sciences, Brno, Czechia
| | - Silvie Bernatova
- Institute of Scientific Instruments of the Czech Academy of Sciences, Brno, Czechia
| | - Veronika Hola
- Department of Microbiology, Faculty of Medicine of Masaryk University and St. Anne’s University Hospital, Brno, Czechia
| | - Filip Ruzicka
- Department of Microbiology, Faculty of Medicine of Masaryk University and St. Anne’s University Hospital, Brno, Czechia
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