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Watkin SAJ, Hashemi A, Thomson DR, Pearce FG, Dobson RCJ, Nock VM. Laminar flow-based microfluidic systems for molecular interaction analysis-Part 1: Chip development, system operation and measurement setup. Methods Enzymol 2023; 682:53-100. [PMID: 36948712 DOI: 10.1016/bs.mie.2022.12.001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
Abstract
The recent advent of laminar flow-based microfluidic systems for molecular interaction analysis has enabled transformative new profiling of proteins in regards to their structure, disordering, complex formation and interactions in general. Based on the diffusive transport of molecules perpendicular to the direction of laminar flow in a microfluidic channel, systems of this type promise continuous-flow, high-throughput screening of complex, multi-molecule interactions, while remaining tolerant to heterogeneous mixtures. Using common microfluidic device processing, the technology provides unique opportunities, as well as device design and experimental challenges, for integrative sample handling approaches that can investigate biomolecular interaction events in complex samples with readily available laboratory equipment. In this first chapter of a two-part series, we introduce system design and experimental setup requirements for a typical laminar flow-based microfluidic system for molecular interaction analysis in the form of what we call the 'LaMInA system' (Laminar flow-based Molecular Interaction Analysis system). We provide microfluidic device development advice on choice of device material, device design, including impact of channel geometry on the signal acquisition, and on design limitations and possible post-fabrication treatments to redress these. Finally. we cover aspects of fluidic actuation, such as selecting, measuring and controlling the flow rate appropriately, and provide a guide to possible fluorescent labels for proteins, as well as options for the fluorescence detection hardware, all in the context of assisting the reader in developing their own laminar flow-based experimental setup for biomolecular interaction analysis.
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Affiliation(s)
- Serena A J Watkin
- Biomolecular Interaction Centre, University of Canterbury, Christchurch, New Zealand; School of Biological Sciences, University of Canterbury, Christchurch, New Zealand
| | - Azadeh Hashemi
- Biomolecular Interaction Centre, University of Canterbury, Christchurch, New Zealand; School of Biological Sciences, University of Canterbury, Christchurch, New Zealand; Department of Electrical & Computer Engineering, University of Canterbury, Christchurch, New Zealand; The MacDiarmid Institute for Advanced Materials and Nanotechnology, Wellington, New Zealand
| | - Dion R Thomson
- Protein Science & Engineering Team, Callaghan Innovation, Christchurch, New Zealand
| | - F Grant Pearce
- Biomolecular Interaction Centre, University of Canterbury, Christchurch, New Zealand; School of Biological Sciences, University of Canterbury, Christchurch, New Zealand.
| | - Renwick C J Dobson
- Biomolecular Interaction Centre, University of Canterbury, Christchurch, New Zealand; School of Biological Sciences, University of Canterbury, Christchurch, New Zealand; The MacDiarmid Institute for Advanced Materials and Nanotechnology, Wellington, New Zealand; Department of Biochemistry and Pharmacology, Bio21 Molecular Science and Biotechnology Institute, University of Melbourne, Parkville, VIC, Australia.
| | - Volker M Nock
- Biomolecular Interaction Centre, University of Canterbury, Christchurch, New Zealand; Department of Electrical & Computer Engineering, University of Canterbury, Christchurch, New Zealand; The MacDiarmid Institute for Advanced Materials and Nanotechnology, Wellington, New Zealand.
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2
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Watkin SAJ, Hashemi A, Thomson DR, Nock VM, Dobson RCJ, Pearce FG. Laminar flow-based microfluidic systems for molecular interaction analysis-Part 2: Data extraction, processing and analysis. Methods Enzymol 2023; 682:429-464. [PMID: 36948710 DOI: 10.1016/bs.mie.2022.12.005] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023]
Abstract
The rate at which fluorescently-labeled biomolecules, that are flowing at a constant speed in a microfluidic channel, diffuse into an adjacent buffer stream can be used to calculate the diffusion coefficient of the molecule, which then gives a measure of its size. Experimentally, determining the rate of diffusion involves capturing concentration gradients in fluorescence microscopy images at different distances along the length of the microfluidic channel, where distance corresponds to residence time, based on the flow velocity. The preceding chapter in this journal covered the development of the experimental setup, including information about the microscope camera detection systems used to acquire fluorescence microscopy data. In order to calculate diffusion coefficients from fluorescence microscopy images, intensity data are extracted from the images and then appropriate methods of processing and analyzing the data, including the mathematical models used for fitting, are applied to the extracted data. This chapter begins with a brief overview of digital imaging and analysis principles, before introducing custom software for extracting the intensity data from the fluorescence microscopy images. Subsequently, methods and explanations for performing the necessary corrections and appropriate scaling of the data are provided. Finally, the mathematics of one-dimensional molecular diffusion is described, and analytical approaches to obtaining the diffusion coefficient from the fluorescence intensity profiles are discussed and compared.
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Affiliation(s)
- Serena A J Watkin
- Biomolecular Interaction Centre, University of Canterbury, Christchurch, New Zealand; School of Biological Sciences, University of Canterbury, Christchurch, New Zealand
| | - Azadeh Hashemi
- Biomolecular Interaction Centre, University of Canterbury, Christchurch, New Zealand; School of Biological Sciences, University of Canterbury, Christchurch, New Zealand; Department of Electrical & Computer Engineering, University of Canterbury, Christchurch, New Zealand; The MacDiarmid Institute for Advanced Materials and Nanotechnology, Wellington, New Zealand
| | - Dion R Thomson
- Protein Science & Engineering Team, Callaghan Innovation, Christchurch, New Zealand
| | - Volker M Nock
- Biomolecular Interaction Centre, University of Canterbury, Christchurch, New Zealand; Department of Electrical & Computer Engineering, University of Canterbury, Christchurch, New Zealand; The MacDiarmid Institute for Advanced Materials and Nanotechnology, Wellington, New Zealand.
| | - Renwick C J Dobson
- Biomolecular Interaction Centre, University of Canterbury, Christchurch, New Zealand; School of Biological Sciences, University of Canterbury, Christchurch, New Zealand; The MacDiarmid Institute for Advanced Materials and Nanotechnology, Wellington, New Zealand; Department of Biochemistry and Molecular Biology, Bio21 Molecular Science and Biotechnology Institute, University of Melbourne, Parkville, VIC, Australia.
| | - F Grant Pearce
- Biomolecular Interaction Centre, University of Canterbury, Christchurch, New Zealand; School of Biological Sciences, University of Canterbury, Christchurch, New Zealand.
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Heuer C, Preuss JA, Buttkewitz M, Scheper T, Segal E, Bahnemann J. A 3D-printed microfluidic gradient generator with integrated photonic silicon sensors for rapid antimicrobial susceptibility testing. LAB ON A CHIP 2022; 22:4950-4961. [PMID: 36412200 DOI: 10.1039/d2lc00640e] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/16/2023]
Abstract
With antimicrobial resistance becoming a major threat to healthcare settings around the world, there is a paramount need for rapid point-of-care antimicrobial susceptibility testing (AST) diagnostics. Unfortunately, most currently available clinical AST tools are lengthy, laborious, or are simply inappropriate for point-of-care testing. Herein, we design a 3D-printed microfluidic gradient generator that automatically produces two-fold dilution series of clinically relevant antimicrobials. We first establish the compatibility of these generators for classical AST (i.e., broth microdilution) and then extend their application to include a complete on-chip label-free and phenotypic AST. This is accomplished by the integration of photonic silicon chips, which provide a preferential surface for microbial colonization and allow optical tracking of bacterial behavior and growth at a solid-liquid interface in real-time by phase shift reflectometric interference spectroscopic measurements (PRISM). Using Escherichia coli and ciprofloxacin as a model pathogen-drug combination, we successfully determine the minimum inhibitory concentration within less than 90 minutes. This gradient generator-based PRISM assay provides an integrated AST device that is viable for convenient point-of-care testing and offers a promising and most importantly, rapid alternative to current clinical practices, which extend to 8-24 h.
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Affiliation(s)
- Christopher Heuer
- Institute of Technical Chemistry, Leibniz University Hannover, 30167 Hannover, Germany
- Department of Biotechnology and Food Engineering, Technion - Israel Institute of Technology, 320003 Haifa, Israel.
| | - John-Alexander Preuss
- Institute of Technical Chemistry, Leibniz University Hannover, 30167 Hannover, Germany
- Institute of Physics, University of Augsburg, 86159 Augsburg, Germany.
| | - Marc Buttkewitz
- Institute of Technical Chemistry, Leibniz University Hannover, 30167 Hannover, Germany
| | - Thomas Scheper
- Institute of Technical Chemistry, Leibniz University Hannover, 30167 Hannover, Germany
| | - Ester Segal
- Department of Biotechnology and Food Engineering, Technion - Israel Institute of Technology, 320003 Haifa, Israel.
| | - Janina Bahnemann
- Institute of Technical Chemistry, Leibniz University Hannover, 30167 Hannover, Germany
- Institute of Physics, University of Augsburg, 86159 Augsburg, Germany.
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4
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Near-infrared imaging to quantify the diffusion coefficient of sodium pentaborate aqueous solution in a microchannel. Chem Eng Sci 2022. [DOI: 10.1016/j.ces.2022.117630] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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Bonament A, Prel A, Sallese JM, Lallement C, Madec M. Analytic modelling of passive microfluidic mixers. MATHEMATICAL BIOSCIENCES AND ENGINEERING : MBE 2022; 19:3892-3908. [PMID: 35341279 DOI: 10.3934/mbe.2022179] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
This paper deals with a new analytical model for microfluidic passive mixers. Two common approaches already exist for such a purpose. On the one hand, the resolution of the advection-diffusion-reaction equation (ADRE) is the first one and the closest to physics. However, ADRE is a partial differential equation that requires finite element simulations. On the other hand, analytical models based on the analogy between microfluidics and electronics have already been established. However, they rely on the assumption of homogeneous fluids, which means that the mixer is supposed to be long enough to obtain a perfect mixture at the output. In this paper, we derive an analytical model from the ADRE under several assumptions. Then we integrate these equations within the electronic-equivalent models. The resulting models computed the relationship between pressure and flow rate in the microfluidic circuit but also takes the concentration gradients that can appear in the direction perpendicular to the channel into account. The model is compared with the finite element simulation performed with COMSOL Multiphysics in several study cases. We estimate that the global error introduced by our model compared to the finite element simulation is less than 5% in every use case. In counterparts, the cost in terms of computational resources is drastically reduced. The analytical model can be implemented in a large range of modelling and simulation languages, including SPICE and hardware description language such as Verilog-AMS. This feature is very interesting in the context of the in silico prototyping of large-scale microfluidic devices or multi-physics devices involving microfluidic circuits, e.g. lab-on-chips.
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Affiliation(s)
- Alexi Bonament
- Laboratory of Engineer Sciences, Computer Science and Imagine (ICube), UMR 7357 (UniversitȦ de Strasbourg/Centre National de Recherche Scientifique), Strasbourg, France
| | - Alexis Prel
- Laboratory of Engineer Sciences, Computer Science and Imagine (ICube), UMR 7357 (UniversitȦ de Strasbourg/Centre National de Recherche Scientifique), Strasbourg, France
| | - Jean-Michel Sallese
- STI-IEL-Electronics Laboratory, Ecole Polytechnique FȦdȦrale de Lausanne (EPFL), Lausanne, Switzerland
| | - Christophe Lallement
- Laboratory of Engineer Sciences, Computer Science and Imagine (ICube), UMR 7357 (UniversitȦ de Strasbourg/Centre National de Recherche Scientifique), Strasbourg, France
| | - Morgan Madec
- Laboratory of Engineer Sciences, Computer Science and Imagine (ICube), UMR 7357 (UniversitȦ de Strasbourg/Centre National de Recherche Scientifique), Strasbourg, France
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Siedlik MJ, Issadore D. Pico-washing: simultaneous liquid addition and removal for continuous-flow washing of microdroplets. MICROSYSTEMS & NANOENGINEERING 2022; 8:46. [PMID: 35498338 PMCID: PMC9050730 DOI: 10.1038/s41378-022-00381-3] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/09/2021] [Revised: 02/02/2022] [Accepted: 03/07/2022] [Indexed: 05/19/2023]
Abstract
Droplet microfluidics is based on a toolbox of several established unit operations, including droplet generation, incubation, mixing, pico-injection, and sorting. In the last two decades, the development of droplet microfluidic systems, which incorporate these multiple unit operations into a workflow, has demonstrated unique capabilities in fields ranging from single-cell transcriptomic analyses to materials optimization. One unit operation that is sorely underdeveloped in droplet microfluidics is washing, exchange of the fluid in a droplet with a different fluid. Here, we demonstrate what we name the "pico-washer," a unit operation capable of simultaneously adding fluid to and removing fluid from droplets in flow while requiring only a small footprint on a microfluidic chip. We describe the fabrication strategy, device architecture, and process parameters required for stable operation of this technology, which is capable of operating with kHz droplet throughput. Furthermore, we provide an image processing workflow to characterize the washing process with microsecond and micrometer resolution. Finally, we demonstrate the potential for integrated droplet workflows by arranging two of these unit operations in series with a droplet generator, describe a design rule for stable operation of the pico-washer when integrated into a system, and validate this design rule experimentally. We anticipate that this technology will contribute to continued development of the droplet microfluidics toolbox and the realization of novel droplet-based, multistep biological and chemical assays.
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Affiliation(s)
- Michael J. Siedlik
- Department of Bioengineering, University of Pennsylvania, Philadelphia, PA 19104 United States
| | - David Issadore
- Department of Bioengineering, University of Pennsylvania, Philadelphia, PA 19104 United States
- Department of Electrical and Systems Engineering, University of Pennsylvania, Philadelphia, PA 19104 United States
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Bezrukov A, Galyametdinov Y. Characterizing properties of polymers and colloids by their reaction-diffusion behavior in microfluidic channels. Colloids Surf A Physicochem Eng Asp 2021. [DOI: 10.1016/j.colsurfa.2021.127565] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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8
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Kanpittaya K, Teerakapong A, Morales NP, Hormdee D, Priprem A, Weera-archakul W, Damrongrungruang T. Inhibitory Effects of Erythrosine/Curcumin Derivatives/Nano-Titanium Dioxide-Mediated Photodynamic Therapy on Candida albicans. Molecules 2021; 26:2405. [PMID: 33919066 PMCID: PMC8122479 DOI: 10.3390/molecules26092405] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/25/2021] [Revised: 04/16/2021] [Accepted: 04/19/2021] [Indexed: 12/14/2022] Open
Abstract
This study focuses on the role of photosensitizers in photodynamic therapy. The photosensitizers were prepared in combinations of 110/220 µM erythrosine and/or 10/20 µM demethoxy/bisdemethoxy curcumin with/without 10% (w/w) nano-titanium dioxide. Irradiation was performed with a dental blue light in the 395-480 nm wavelength range, with a power density of 3200 mW/cm2 and yield of 72 J/cm2. The production of ROS and hydroxyl radical was investigated using an electron paramagnetic resonance spectrometer for each individual photosensitizer or in photosensitizer combinations. Subsequently, a PrestoBlue® toxicity test of the gingival fibroblast cells was performed at 6 and 24 h on the eight highest ROS-generating photosensitizers containing curcumin derivatives and erythrosine 220 µM. Finally, the antifungal ability of 22 test photosensitizers, Candida albicans (ATCC 10231), were cultured in biofilm form at 37 °C for 48 h, then the colonies were counted in colony-forming units (CFU/mL) via the drop plate technique, and then the log reduction was calculated. The results showed that at 48 h the test photosensitizers could simultaneously produce both ROS types. All test photosensitizers demonstrated no toxicity on the fibroblast cells. In total, 18 test photosensitizers were able to inhibit Candida albicans similarly to nystatin. Conclusively, 20 µM bisdemethoxy curcumin + 220 µM erythrosine + 10% (w/w) nano-titanium dioxide exerted the highest inhibitory effect on Candida albicans.
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Affiliation(s)
- Kasama Kanpittaya
- Division of Periodontology, Department of Oral Biomedical Sciences, Faculty of Dentistry, Khon Kaen University, Khon Kaen 40002, Thailand; (K.K.); (A.T.); (D.H.)
- Dental Department, Chumphae Hospital, Khon Kaen 40130, Thailand
| | - Aroon Teerakapong
- Division of Periodontology, Department of Oral Biomedical Sciences, Faculty of Dentistry, Khon Kaen University, Khon Kaen 40002, Thailand; (K.K.); (A.T.); (D.H.)
- Laser in Dentistry Research Group, Khon Kaen University, Khon Kaen 40002, Thailand
| | | | - Doosadee Hormdee
- Division of Periodontology, Department of Oral Biomedical Sciences, Faculty of Dentistry, Khon Kaen University, Khon Kaen 40002, Thailand; (K.K.); (A.T.); (D.H.)
| | - Aroonsri Priprem
- Faculty of Pharmacy, Mahasarakham University, Maha Sarakham 44150, Thailand;
| | - Wilawan Weera-archakul
- Division of Dental Public Health, Department of Preventive Dentistry, Faculty of Dentistry, Khon Kaen University, Khon Kaen 40002, Thailand;
| | - Teerasak Damrongrungruang
- Laser in Dentistry Research Group, Khon Kaen University, Khon Kaen 40002, Thailand
- Research and Academic Services, Khon Kaen University, Khon Kaen 40002, Thailand
- Division of Oral Diagnosis, Department of Oral Biomedical Sciences, Faculty of Dentistry, Khon Kaen University, Khon Kaen 40002, Thailand
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Pieranski M, Sitkiewicz I, Grinholc M. Increased photoinactivation stress tolerance of Streptococcus agalactiae upon consecutive sublethal phototreatments. Free Radic Biol Med 2020; 160:657-669. [PMID: 32916279 DOI: 10.1016/j.freeradbiomed.2020.09.003] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 06/03/2020] [Revised: 08/24/2020] [Accepted: 09/02/2020] [Indexed: 02/08/2023]
Abstract
Streptococcus agalactiae (Group B Streptococcus, GBS) is a common commensal bacterium in adults but remains a leading source of invasive infections in newborns, pregnant women, and the elderly, and more recently, causes an increased incidence of invasive disease in nonpregnant adults. Reduced penicillin susceptibility and emerging resistance to non-β-lactams pose challenges for the development and implementation of novel, nonantimicrobial strategies to reduce the burden of GBS infections. Antimicrobial photodynamic inactivation (aPDI) via the production of singlet oxygen or other reactive oxygen species leads to the successful eradication of pathogenic bacteria, affecting numerous cellular targets of microbial pathogens and indicating a low risk of resistance development. Nevertheless, we have previously reported possible aPDI tolerance development upon repeated sublethal aPDI applications; thus, the current work was aimed at investigating whether aPDI tolerance could be observed for GBS and what mechanisms could cause it. To address this problem, 10 cycles of sublethal aPDI treatments employing rose bengal as a photosensitizer, were applied to the S. agalactiae ATCC 27956 reference strain and two clinical isolates (2306/02 and 2974/07, serotypes III and V, respectively). We demonstrated aPDI tolerance development and stability after 5 cycles of subculturing with no aPDI exposure. Though the treatment resulted in a stable phenotype, no increases in mutation rate or accumulated genetic alterations were observed (employing a RIF-, CIP-, STR-resistant mutant selection assay and cyl sequencing, respectively). qRT-PCR analysis demonstrated that 10 sublethal aPDI exposures led to increased expression of all tested major oxidative stress response elements; changes in sodA, ahpC, npx, cylE, tpx and recA expression indicate possible mechanisms of developed tolerance. Increased expression upon sublethal aPDI treatment was reported for all but two genes, namely, ahpC and cylE. aPDI targeting cylE was further supported by colony morphology changes induced with 10 cycles of aPDI (increased SCV population, increased hemolysis, increased numbers of dark- and unpigmented colonies). In oxidant killing assays, aPDI-tolerant strains demonstrated no increased tolerance to hypochlorite, superoxide (paraquat), singlet oxygen (new methylene blue) or oxidative stress induced by aPDI employing a structurally different photosensitizer, i.e., zinc phthalocyanine, indicating a lack of cross resistance. The results indicate that S. agalactiae may develop stable aPDI tolerance but not resistance when subjected to multiple sublethal phototreatments, and this risk should be considered significant when defining efficient anti-S. agalactiae aPDI protocols.
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Affiliation(s)
- Michal Pieranski
- Intercollegiate Faculty of Biotechnology, Laboratory of Molecular Diagnostics, University of Gdansk and Medical University of Gdansk, Abrahama 58, 80-307, Gdansk, Poland
| | - Izabela Sitkiewicz
- Department of Drug Biotechnology and Bioinformatics, National Medicines Institute, Chelmska 30/34, 00-725, Warszawa, Poland
| | - Mariusz Grinholc
- Intercollegiate Faculty of Biotechnology, Laboratory of Molecular Diagnostics, University of Gdansk and Medical University of Gdansk, Abrahama 58, 80-307, Gdansk, Poland.
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An extended logistic model of photodynamic inactivation for various levels of irradiance using the example of Streptococcus agalactiae. Sci Rep 2020; 10:14168. [PMID: 32843677 PMCID: PMC7447635 DOI: 10.1038/s41598-020-71033-7] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/05/2020] [Accepted: 08/07/2020] [Indexed: 11/08/2022] Open
Abstract
Irradiance is an important factor influencing the acceleration of microorganism mortality in photodynamic inactivation (PDI) processes. Experimental observations of PDI processes indicate that the greater the irradiation power is, the faster the decrease in the population size of microorganisms. However, commonly used mathematical models of PDI processes usually refer only to specific values of irradiance without taking into account the influence of change in irradiance on the dynamic properties of inactivation. The main goal of this paper is to analyze the effect of irradiance on the PDI process and attempt to mathematically model the obtained dependencies. The analysis was carried out using the example of photodynamic inactivation of the bacterium Streptococcus agalactiae with the adopted Logistic PDI model optimized for several selected levels of irradiance. To take into account the impact of changes in irradiation power on the PDI model, the selected parameters were made appropriately dependent on this factor. The paper presents several variants of parameter modification with an evaluation of the model fitting quality criterion. The discussion on appropriate selection of parameters to be modified was carried out as a comparative analysis of several case studies. The extended logistic PDI model obtained in the conducted research effectively describes the dynamics of microorganism mortality in the whole tested irradiation power range.
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11
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Midelet C, Le Pioufle B, Werts MHV. Brownian Motion and Large Electric Polarizabilities Facilitate Dielectrophoretic Capture of Sub‐200 nm Gold Nanoparticles in Water. Chemphyschem 2019; 20:3354-3365. [DOI: 10.1002/cphc.201900662] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/03/2019] [Revised: 09/13/2019] [Indexed: 02/06/2023]
Affiliation(s)
- Clyde Midelet
- Univ RennesCNRS, SATIE-UMR 8029 35000 Rennes France
- École normale supérieure de RennesSATIE (CNRS UMR 8029) Av. R. Schuman, Campus de Ker Lann 35170 Bruz France
| | - Bruno Le Pioufle
- Ecole normale supérieure Paris-SaclaySATIE (CNRS UMR 8029), Institut d'Alembert 94235 Cachan France
| | - Martinus H. V. Werts
- Univ RennesCNRS, SATIE-UMR 8029 35000 Rennes France
- École normale supérieure de RennesSATIE (CNRS UMR 8029) Av. R. Schuman, Campus de Ker Lann 35170 Bruz France
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12
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Parittotokkaporn S, Dravid A, Bansal M, Aqrawe Z, Svirskis D, Suresh V, O’Carroll SJ. Make it simple: long-term stable gradient generation in a microfluidic microdevice. Biomed Microdevices 2019; 21:77. [DOI: 10.1007/s10544-019-0427-4] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
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13
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Chaparro FJ, Presley KF, Coutinho da Silva MA, Mandan N, Colachis ML, Posner M, Arnold RM, Fan F, Moraes CR, Lannutti JJ. Sintered electrospun poly(ɛ‐caprolactone)–poly(ethylene terephthalate) for drug delivery. J Appl Polym Sci 2019. [DOI: 10.1002/app.47731] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Francisco J. Chaparro
- Department of Materials Science and EngineeringThe Ohio State University 2041 College Road, Columbus Ohio 43210
| | - Kayla F. Presley
- Department of Materials Science and EngineeringThe Ohio State University 2041 College Road, Columbus Ohio 43210
| | - Marco A. Coutinho da Silva
- Department of Veterinary Clinical SciencesThe Ohio State University 601 Vernon Tharp Street, Columbus Ohio 43210
| | - Nayan Mandan
- Department of Materials Science and EngineeringThe Ohio State University 2041 College Road, Columbus Ohio 43210
| | - Matthew L. Colachis
- Department of Materials Science and EngineeringThe Ohio State University 2041 College Road, Columbus Ohio 43210
| | - Michael Posner
- Department of Materials Science and EngineeringThe Ohio State University 2041 College Road, Columbus Ohio 43210
| | - Ryan M. Arnold
- Department of Materials Science and EngineeringThe Ohio State University 2041 College Road, Columbus Ohio 43210
| | - Fan Fan
- Department of Materials Science and EngineeringThe Ohio State University 2041 College Road, Columbus Ohio 43210
| | - Christa R. Moraes
- Department of Veterinary Clinical SciencesThe Ohio State University 601 Vernon Tharp Street, Columbus Ohio 43210
| | - John J. Lannutti
- Department of Materials Science and EngineeringThe Ohio State University 2041 College Road, Columbus Ohio 43210
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14
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Gong H, Woolley AT, Nordin GP. 3D printed selectable dilution mixer pumps. BIOMICROFLUIDICS 2019; 13:014106. [PMID: 30766649 PMCID: PMC6353643 DOI: 10.1063/1.5070068] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/18/2018] [Accepted: 01/16/2019] [Indexed: 05/03/2023]
Abstract
In this paper, we demonstrate the ability to 3D print tightly integrated structures with active valves, pumps, and mixers, and we use our compact chip-to-chip interconnects [Gong et al., Lab Chip 18, 639-647 (2018)] to move bulky world-to-chip connections to separate interface chips for both post-print flushing and post-cure device operation. As example devices, we first examine 3D printed pumps, followed by two types of selectable ratio mixer pumps, a linear dilution mixer pump (LDMP) and a parallelized dilution mixer pump (PDMP), which occupy volumes of only 1.5 mm 3 and 2.6 mm 3 , respectively. The LDMP generates a selectable dilution ratio from a linear set of possibilities, while the PDMP generates a denser set of possible dilutions with a maximum dilution ratio of 1/16. The PDMP also incorporates a new 4-to-1 valve to simultaneously control 4 inlet channels. To characterize LDMP and PDMP operation and performance, we present a new, low-cost video method to directly measure the relative concentration of an absorptive dye on a pixel-by-pixel basis for each video frame. Using this method, we find that 6 periods of the active mixer that forms the core of the LDMP and PDMP are sufficient to fully mix the fluid, and that the generated concentrations track the designed dilution ratios as expected. The LDMP mixes 20 nl per 4.6 s mixer pump period, while the PDMP uses parallelized input pumps to process the same fluid volume with greater choice of dilution ratios in a 3.6 s period.
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Affiliation(s)
- Hua Gong
- Electrical and Computer Engineering Department, Brigham Young University, Provo, Utah 84602, USA
| | - Adam T Woolley
- Chemistry and Biochemistry Department, Brigham Young University, Provo, Utah 84602, USA
| | - Gregory P Nordin
- Electrical and Computer Engineering Department, Brigham Young University, Provo, Utah 84602, USA
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15
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Italia V, Giakoumaki AN, Bonfadini S, Bharadwaj V, Le Phu T, Eaton SM, Ramponi R, Bergamini G, Lanzani G, Criante L. Laser-Inscribed Glass Microfluidic Device for Non-Mixing Flow of Miscible Solvents. MICROMACHINES 2018; 10:mi10010023. [PMID: 30597992 PMCID: PMC6356550 DOI: 10.3390/mi10010023] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/24/2018] [Revised: 12/23/2018] [Accepted: 12/24/2018] [Indexed: 01/16/2023]
Abstract
In recent years, there has been significant research on integrated microfluidic devices. Microfluidics offer an advantageous platform for the parallel laminar flow of adjacent solvents of potential use in modern chemistry and biology. To reach that aim, we worked towards the realization of a buried microfluidic Lab-on-a-Chip which enables the separation of the two components by exploiting the non-mixing properties of laminar flow. To fabricate the aforementioned chip, we employed a femtosecond laser irradiation technique followed by chemical etching. To optimize the configuration of the chip, several geometrical and structural parameters were taken into account. The diffusive mass transfer between the two fluids was estimated and the optimal chip configuration for low diffusion rate of the components was defined.
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Affiliation(s)
- Valeria Italia
- Center for Nano Science and Technology, Istituto Italiano di Tecnologia, 20133 Milano, Italy.
| | - Argyro N Giakoumaki
- Dipartimento di Fisica, Politecnico di Milano, Piazza Leonardo da Vinci 32, 20133 Milano, Italy.
- Istituto di Fotonica e Nanotecnologie-Consiglio Nazionale delle Ricerche (IFN-CNR), Piazza Leonardo da Vinci 32, 20133 Milano, Italy.
| | - Silvio Bonfadini
- Center for Nano Science and Technology, Istituto Italiano di Tecnologia, 20133 Milano, Italy.
- Dipartimento di Fisica, Politecnico di Milano, Piazza Leonardo da Vinci 32, 20133 Milano, Italy.
| | - Vibhav Bharadwaj
- Istituto di Fotonica e Nanotecnologie-Consiglio Nazionale delle Ricerche (IFN-CNR), Piazza Leonardo da Vinci 32, 20133 Milano, Italy.
| | - Thien Le Phu
- Dipartimento di Fisica, Politecnico di Milano, Piazza Leonardo da Vinci 32, 20133 Milano, Italy.
- Istituto di Fotonica e Nanotecnologie-Consiglio Nazionale delle Ricerche (IFN-CNR), Piazza Leonardo da Vinci 32, 20133 Milano, Italy.
| | - Shane M Eaton
- Istituto di Fotonica e Nanotecnologie-Consiglio Nazionale delle Ricerche (IFN-CNR), Piazza Leonardo da Vinci 32, 20133 Milano, Italy.
| | - Roberta Ramponi
- Dipartimento di Fisica, Politecnico di Milano, Piazza Leonardo da Vinci 32, 20133 Milano, Italy.
- Istituto di Fotonica e Nanotecnologie-Consiglio Nazionale delle Ricerche (IFN-CNR), Piazza Leonardo da Vinci 32, 20133 Milano, Italy.
| | - Giacomo Bergamini
- Department of Chemistry Giacomo Ciamician University of Bologna Via Selmi 2, I-40126 Bologna, Italy.
| | - Guglielmo Lanzani
- Center for Nano Science and Technology, Istituto Italiano di Tecnologia, 20133 Milano, Italy.
| | - Luigino Criante
- Center for Nano Science and Technology, Istituto Italiano di Tecnologia, 20133 Milano, Italy.
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16
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Yamashita H, Kakuta N, Kawashima D, Yamada Y. Measurement of temperature-dependent diffusion coefficients of aqueous solutions by near-infrared simultaneous imaging of temperature and concentration. Biomed Phys Eng Express 2018. [DOI: 10.1088/2057-1976/aab645] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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17
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Midelet J, El-Sagheer AH, Brown T, Kanaras AG, Débarre A, Werts MHV. Spectroscopic and Hydrodynamic Characterisation of DNA-Linked Gold Nanoparticle Dimers in Solution using Two-Photon Photoluminescence. Chemphyschem 2018; 19:827-836. [PMID: 29465817 DOI: 10.1002/cphc.201701228] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/13/2017] [Indexed: 01/08/2023]
Abstract
Two-photon photoluminescence (TPPL) emission spectra of DNA-gold nanoparticle (AuNP) monoconjugates and the corresponding DNA-linked AuNP dimers are obtained by photon time-of-flight spectroscopy. This technique is combined with two-photon photoluminescence fluctuation correlation spectroscopy (TPPL-FCS) to simultaneously monitor the optical and hydrodynamic behaviour of these nano-assemblies in solution, with single-particle sensitivity and microsecond temporal resolution. In this study, the AuNPs have an average core diameter of 12 nm, which renders their dark-field plasmonic light scattering too weak for single-particle imaging. Moreover, as a result of the lack of plasmonic coupling in the dimers, the optical extinction, scattering and photoluminescence spectra of the DNA-AuNP complexes are not sufficiently different to distinguish between monomers and dimers. The use of TPPL-FCS successfully addresses these bottlenecks and enables the distinction between AuNP monomers and AuNP dimers in solution by measurement of their hydrodynamic rotational and translational diffusion.
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Affiliation(s)
- Johanna Midelet
- Physics and Astronomy, University of Southampton, Southampton, SO17 1BJ, United Kingdom
| | - Afaf H El-Sagheer
- Department of Chemistry, University of Oxford, 12 Mansfield Road, Oxford, OX1 3TA, United Kingdom
| | - Tom Brown
- Department of Chemistry, University of Oxford, 12 Mansfield Road, Oxford, OX1 3TA, United Kingdom
| | - Antonios G Kanaras
- Physics and Astronomy, University of Southampton, Southampton, SO17 1BJ, United Kingdom
| | - Anne Débarre
- Lab. Aimé-Cotton and PPSM, École Normale Supérieure de Cachan, CNRS, 61 Av. du Président Wilson, 94235, Cachan, France
| | - Martinus H V Werts
- Univ Rennes, CNRS, SATIE-UMR8029, 35000, Rennes, France.,École Normale Supérieure de Rennes, Av. R. Schuman, Campus de Ker Lann, 35170, Bruz, France
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18
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P Radhakrishnan AN, Marques MPC, Davies MJ, O'Sullivan B, Bracewell DG, Szita N. Flocculation on a chip: a novel screening approach to determine floc growth rates and select flocculating agents. LAB ON A CHIP 2018; 18:585-594. [PMID: 29345271 DOI: 10.1039/c7lc00793k] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
Flocculation is a key purification step in cell-based processes for the food and pharmaceutical industry where the removal of cells and cellular debris is aided by adding flocculating agents. However, finding the best suited flocculating agent and optimal conditions to achieve rapid and effective flocculation is a non-trivial task. In conventional analytical systems, turbulent mixing creates a dynamic equilibrium between floc growth and breakage, constraining the determination of floc formation rates. Furthermore, these systems typically rely on end-point measurements only. We have successfully developed for the first time a microfluidic system for the study of flocculation under well controlled conditions. In our microfluidic device (μFLOC), floc sizes and growth rates were monitored in real time using high-speed imaging and computational image analysis. The on-line and in situ detection allowed quantification of floc sizes and their growth kinetics. This eliminated the issues of sample handling, sample dispersion, and end-point measurements. We demonstrated the power of this approach by quantifying the growth rates of floc formation under forty different growth conditions by varying industrially relevant flocculating agents (pDADMAC, PEI, PEG), their concentration and dosage. Growth rates between 12.2 μm s-1 for a strongly cationic flocculant (pDADMAC) and 0.6 μm s-1 for a non-ionic flocculant (PEG) were observed, demonstrating the potential to rank flocculating conditions in a quantitative way. We have therefore created a screening tool to efficiently compare flocculating agents and rapidly find the best flocculating condition, which will significantly accelerate early bioprocess development.
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Affiliation(s)
- Anand N P Radhakrishnan
- Department of Biochemical Engineering, University College London, Bernard Katz Building, Gordon Street, London WC1H 0AH, UK.
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19
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O’Brien M. An automated colorimetric inline titration of CO2 concentrations in solvent flow streams using a Teflon AF-2400 tube-in-tube device. J CO2 UTIL 2017. [DOI: 10.1016/j.jcou.2017.08.020] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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20
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Peters C, Wolff L, Haase S, Thien J, Brands T, Koß HJ, Bardow A. Multicomponent diffusion coefficients from microfluidics using Raman microspectroscopy. LAB ON A CHIP 2017; 17:2768-2776. [PMID: 28660976 DOI: 10.1039/c7lc00433h] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
Diffusion is slow. Thus, diffusion experiments are intrinsically time-consuming and laborious. Additionally, the experimental effort is multiplied for multicomponent systems as the determination of multicomponent diffusion coefficients typically requires several experiments. To reduce the experimental effort, we present the first microfluidic diffusion measurement method for multicomponent liquid systems. The measurement setup combines a microfluidic chip with Raman microspectroscopy. Excellent agreement between experimental results and literature data is achieved for the binary system cyclohexane + toluene and the ternary system 1-propanol + 1-chlorobutane + heptane. The Fick diffusion coefficients are obtained from fitting a multicomponent convection-diffusion model to the mole fractions measured in experiments. Ternary diffusion coefficients can be obtained from a single experiment; high accuracy is already obtained from two experiments. Advantages of the presented measurement method are thus short measurement times, reduced sample consumption, and less experiments for the determination of a multicomponent diffusion coefficient.
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Affiliation(s)
- Christine Peters
- Chair of Technical Thermodynamics, RWTH Aachen University, 52056 Aachen, Germany.
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21
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Bottaro E, Mosayyebi A, Carugo D, Nastruzzi C. Analysis of the Diffusion Process by pH Indicator in Microfluidic Chips for Liposome Production. MICROMACHINES 2017; 8:mi8070209. [PMID: 30400400 PMCID: PMC6189829 DOI: 10.3390/mi8070209] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/28/2017] [Revised: 06/08/2017] [Accepted: 06/17/2017] [Indexed: 11/16/2022]
Abstract
In recent years, the development of nano- and micro-particles has attracted considerable interest from researchers and enterprises, because of the potential utility of such particles as drug delivery vehicles. Amongst the different techniques employed for the production of nanoparticles, microfluidic-based methods have proven to be the most effective for controlling particle size and dispersity, and for achieving high encapsulation efficiency of bioactive compounds. In this study, we specifically focus on the production of liposomes, spherical vesicles formed by a lipid bilayer encapsulating an aqueous core. The formation of liposomes in microfluidic devices is often governed by diffusive mass transfer of chemical species at the liquid interface between a solvent (i.e., alcohol) and a non-solvent (i.e., water). In this work, we developed a new approach for the analysis of mixing processes within microfluidic devices. The method relies on the use of a pH indicator, and we demonstrate its utility by characterizing the transfer of ethanol and water within two different microfluidic architectures. Our approach represents an effective route to experimentally characterize diffusion and advection processes governing the formation of vesicular/micellar systems in microfluidics, and can also be employed to validate the results of numerical modelling.
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Affiliation(s)
- Elisabetta Bottaro
- Bioengineering Science Group, Faculty of Engineering and the Environment, University of Southampton, Southampton SO17 1BJ, UK.
- Department of Life Science and Biotechnology, University of Ferrara, Via Fossato di Mortara 17, 44121 Ferrara, Italy.
| | - Ali Mosayyebi
- Bioengineering Science Group, Faculty of Engineering and the Environment, University of Southampton, Southampton SO17 1BJ, UK.
| | - Dario Carugo
- Bioengineering Science Group, Faculty of Engineering and the Environment, University of Southampton, Southampton SO17 1BJ, UK.
- Institute for Life Sciences (IfLS), University of Southampton, Southampton SO17 1BJ, UK.
| | - Claudio Nastruzzi
- Department of Life Science and Biotechnology, University of Ferrara, Via Fossato di Mortara 17, 44121 Ferrara, Italy.
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22
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Syms R. Rapid evaporation-driven chemical pre-concentration and separation on paper. BIOMICROFLUIDICS 2017; 11:044116. [PMID: 28868109 PMCID: PMC5570596 DOI: 10.1063/1.4989627] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/10/2017] [Accepted: 08/14/2017] [Indexed: 05/10/2023]
Abstract
Airflow-enhanced evaporation is investigated as a method for rapid chemical preconcentration on a thin porous substrate. The mechanism is described by combining 1D models of capillary rise, chromatography, and pervaporation concentration. It is shown that the effective length of the column can be shorter than its actual length, allowing concentrate to be held at a stagnation point and then released for separation, and that the Péclet number, which determines the concentration performance, is determined only by the substrate properties. The differential equations are solved dynamically, and it is shown that faster concentration can be achieved during capillary filling. Experiments are carried out using chromatography paper in a ducted airflow, and concentration is quantified by optical imaging of water-soluble food dyes. Good agreement with the model is obtained, and concentration factors of ≈100 are achieved in 10 min using Brilliant Blue FCF. Partial separation of Brilliant Blue from Tartrazine is demonstrated immediately following concentration, on a single unpatterned substrate. The mechanism may provide a method for improving the sensitivity of lab-on-paper devices.
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Affiliation(s)
- Richard Syms
- EEE Department, Imperial College London, Exhibition Road, London SW7 2AZ, United Kingdom
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23
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Giers MB, Munter BT, Eyster KJ, Ide GD, Newcomb AG, Lehrman JN, Belykh E, Byvaltsev VA, Kelly BP, Preul MC, Theodore N. Biomechanical and Endplate Effects on Nutrient Transport in the Intervertebral Disc. World Neurosurg 2017; 99:395-402. [DOI: 10.1016/j.wneu.2016.12.041] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/10/2016] [Revised: 12/09/2016] [Accepted: 12/10/2016] [Indexed: 01/18/2023]
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24
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Roh C, Lee J, Kang C. Physical Properties of PDMS (Polydimethylsiloxane) Microfluidic Devices on Fluid Behaviors: Various Diameters and Shapes of Periodically-Embedded Microstructures. MATERIALS 2016; 9:ma9100836. [PMID: 28773958 PMCID: PMC5456639 DOI: 10.3390/ma9100836] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/17/2016] [Revised: 09/29/2016] [Accepted: 10/11/2016] [Indexed: 11/16/2022]
Abstract
Deformable polydimethylsiloxane (PDMS) microfluidic devices embedded with three differently-shaped obstacles (hexagon, square, and triangle) were used to examine the significant challenge to classical fluid dynamics. The significant factors in determining a quasi-steady state value of flow velocity (v)QS and pressure drop per unit length (∆P/∆x)QS were dependent on the characteristic of embedded microstructures as well as the applied flow rates. The deviation from the theoretical considerations due to PDMS bulging investigated by the friction constant and the normalized friction factor revealed that the largest PDMS bulging observed in hexagonal obstacles had the smallest (∆P/∆x)QS ratios, whereas triangle obstacles exhibited the smallest PDMS bulging, but recorded the largest (∆P/∆x)QS ratios. However, the influence of (v)QS ratio on microstructures was not very significant in this study. The results were close to the predicted values even though some discrepancy may be due to the relatively mean bulging and experimental uncertainty. The influence of deformable PDMS microfluidic channels with various shapes of embedded microstructures was compared with the rigid microchannels. The significant deviation from the classical relation (i.e., f~1/Re) was also observed in hexagonal obstacles and strongly dependent on the channel geometry, the degree of PDMS deformation, and the shapes of the embedded microstructures.
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Affiliation(s)
- Changhyun Roh
- Biotechnology Research Division, Advanced Radiation Technology Institute (ARTI), Korea Atomic Energy Research Institute (KAERI), 29 Geumgu-gil, Jeongeup, Jeonbuk 56212, Korea.
| | - Jaewoong Lee
- Department of Textile Engineering and Technology, Yeungnam University, 280 Daehak-Ro, Gyeongsan, Gyeongbuk 38541, Korea.
| | - ChanKyu Kang
- Ministry of Employment and Labor, Major Industrial Accident Prevention Center, 34 Yeosusandallo, Yeosu-Si, Jeonnam 59631, Korea.
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25
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Jussen D, Soltner H, Stute B, Wiechert W, von Lieres E, Pohl M. μMORE: A microfluidic magnetic oscillation reactor for accelerated parameter optimization in biocatalysis. J Biotechnol 2016; 231:174-182. [PMID: 27288595 DOI: 10.1016/j.jbiotec.2016.06.006] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/19/2016] [Revised: 06/06/2016] [Accepted: 06/07/2016] [Indexed: 12/15/2022]
Abstract
Enzymatic parameter determination is an essential step in biocatalytic process development. Therefore higher throughput in miniaturized devices is urgently needed. An ideal microfluidic device should combine easy immobilization and retention of a minimal amount of biocatalyst with a well-mixed reaction volume. Together, all criteria are hardly met by current tools. Here we describe a microfluidic reactor (μMORE) which employs magnetic particles for both enzyme immobilization and efficient mixing using two permanent magnets placed in rotating cylinders next to the a glass chip reactor. The chip geometry and agitation speed was optimized by investigation of the mixing and retention characteristics using simulation and dye distribution analysis. Subsequently, the μMORE was successfully applied to determine critical biocatalytic process parameters in a parallelized manner for the carboligation of benzaldehyde and acetaldehyde to (S)-2-hydroxy-1-phenylpropan-1-one with less than 5μg of benzoylformate decarboxylase from Pseudomonas putida immobilized on magnetic beads. Here, one run of the device in six parallelized glass reactors took only 2-3h for an immobilized enzyme with very low activity (∼2U/mg). The optimized parameter set was finally tested in a 10mL enzyme membrane reactor, demonstrating that the μMORE provides a solid data base for biocatalytic process optimization.
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Affiliation(s)
- Daniel Jussen
- IBG-1: Biotechnology, Forschungszentrum Jülich GmbH, D-52425 Jülich, Germany.
| | - Helmut Soltner
- ZEA-1: Engineering and Technology, Forschungszentrum Jülich GmbH, D-52425 Jülich, Germany.
| | - Birgit Stute
- IBG-1: Biotechnology, Forschungszentrum Jülich GmbH, D-52425 Jülich, Germany.
| | - Wolfgang Wiechert
- IBG-1: Biotechnology, Forschungszentrum Jülich GmbH, D-52425 Jülich, Germany.
| | - Eric von Lieres
- IBG-1: Biotechnology, Forschungszentrum Jülich GmbH, D-52425 Jülich, Germany.
| | - Martina Pohl
- IBG-1: Biotechnology, Forschungszentrum Jülich GmbH, D-52425 Jülich, Germany.
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26
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The μSCAPE System: 3-Dimensional Profiling of Microfluidic Architectural Features Using a Flatbed Scanner. Sci Rep 2016; 6:22246. [PMID: 26924294 PMCID: PMC4770298 DOI: 10.1038/srep22246] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2015] [Accepted: 02/10/2016] [Indexed: 12/16/2022] Open
Abstract
We developed a microfluidic scanner-based profile exploration system, μSCAPE, capable of generating high resolution 3D profiles of microstructure architecture in a variety of transparent substrates. The profile is obtained by scanning the dye-filled microstructure followed by absorbance calculation and the reconstruction of the optical length at each point. The power of the method was demonstrated in (1) the inspection of the variation of the cross-section of laser-ablated PDMS channel; (2) the volume of PeT chamber; and (3) the population distribution of the volumes of the micro wells in HF-etched glass and laser-ablated PDMS. The reported methods features low equipment-cost, convenient operation and large field of view (FOV), and has revealed unreported quality parameters of the tested microstructures.
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27
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Navarro JRG, Werts MHV. Resonant light scattering spectroscopy of gold, silver and gold-silver alloy nanoparticles and optical detection in microfluidic channels. Analyst 2014; 138:583-92. [PMID: 23172138 DOI: 10.1039/c2an36135c] [Citation(s) in RCA: 127] [Impact Index Per Article: 12.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
Dark field resonant light scattering by gold and silver nanoparticles enables the detection and spectroscopy of such particles with high sensitivity, down to the single-particle level, and can be used to implement miniaturised optical detection schemes for chemical and biological analysis. Here, we present a straightforward optical spectroscopic methodology for the quantitative spectrometric study of resonant light scattering (RLS) by nanoparticles. RLS spectroscopy is complementary to UV-visible absorbance measurements, and we apply it to the characterisation and comparison of different types of gold, silver and gold-silver alloy nanoparticles. The potential of gold and silver particles as alternatives for fluorescent probes in certain applications is discussed. RLS spectroscopy is shown to be useful for studying analyte-induced gold nanoparticle assembly and nanoparticle chemistry, which can induce radical changes in the plasmonic resonances responsible for the strong light scattering. Furthermore, the feasibility of dark field RLS detection and quantitation of metal nanoparticles in microfluidic volumes is demonstrated, opening interesting possibilities for the further development of microfluidic detection schemes.
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Affiliation(s)
- Julien R G Navarro
- Ecole Normale Supérieure de Cachan-Bretagne, SATIE (UMR 8029), Campus de Ker Lann, F-35170 Bruz, France
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28
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Navarro JRG, Lerouge F, Cepraga C, Micouin G, Favier A, Chateau D, Charreyre MT, Lanoë PH, Monnereau C, Chaput F, Marotte S, Leverrier Y, Marvel J, Kamada K, Andraud C, Baldeck PL, Parola S. Nanocarriers with ultrahigh chromophore loading for fluorescence bio-imaging and photodynamic therapy. Biomaterials 2013; 34:8344-51. [PMID: 23915950 DOI: 10.1016/j.biomaterials.2013.07.032] [Citation(s) in RCA: 52] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2013] [Accepted: 07/08/2013] [Indexed: 12/13/2022]
Abstract
We describe the design of original nanocarriers that allows for ultrahigh chromophore loading while maintaining the photo-activity of each individual molecule. They consist in shells of charged biocompatible polymers grafted on gold nanospheres. The self-organization of extended polymer chains results from repulsive charges and steric interactions that are optimized by tuning the surface curvature of nanoparticles. This type of nano-scaffolds can be used as light-activated theranostic agents for fluorescence imaging and photodynamic therapy. We demonstrate that, labeled with a fluorescent photosensitizer, it can localize therapeutic molecules before triggering the cell death of B16-F10 melanoma with an efficiency that is similar to the efficiency of the polymer conjugate alone, and with the advantage of extremely high local loading of photosensitizers (object concentration in the picomolar range).
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Affiliation(s)
- Julien R G Navarro
- Laboratoire de Chimie UMR 5182, Ecole Normale Supérieure de Lyon, CNRS, université Lyon 1, 46, allée d'Italie, Lyon cedex 07 F-69364, France
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29
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Navarro JRG, Manchon D, Lerouge F, Blanchard NP, Marotte S, Leverrier Y, Marvel J, Chaput F, Micouin G, Gabudean AM, Mosset A, Cottancin E, Baldeck PL, Kamada K, Parola S. Synthesis of PEGylated gold nanostars and bipyramids for intracellular uptake. NANOTECHNOLOGY 2012; 23:465602. [PMID: 23095344 DOI: 10.1088/0957-4484/23/46/465602] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/01/2023]
Abstract
A great number of works have focused their research on the synthesis, design and optical properties of gold nanoparticles for potential biological applications (bioimaging, biosensing). For this kind of application, sharp gold nanostructures appear to exhibit the more interesting features since their surface plasmon bands are very sensitive to the surrounding medium. In this paper, a complete study of PEGylated gold nanostars and PEGylated bipyramidal-like nanostructures is presented. The nanoparticles are prepared in high yield and their surfaces are covered with a biocompatible polymer. The photophysical properties of gold bipyramids and nanostars, in suspension, are correlated with the optical response of single and isolated objects. The resulting spectra of isolated gold nanoparticles are subsequently correlated to their geometrical structure by transmission electron microscopy. Finally, the PEGylated gold nanoparticles were incubated with melanoma B16-F10 cells. Dark-field microscopy showed that the biocompatible gold nanoparticles were easily internalized and most of them localized within the cells.
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Affiliation(s)
- Julien R G Navarro
- Université de Lyon, ENS Lyon, CNRS, Université Lyon 1, Laboratoire de Chimie UMR 5182, 46, allée d'Italie, F-69364, Lyon cedex 07, France
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30
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O'Brien M, Koos P, Browne DL, Ley SV. A prototype continuous-flow liquid-liquid extraction system using open-source technology. Org Biomol Chem 2012; 10:7031-6. [PMID: 22858870 DOI: 10.1039/c2ob25912e] [Citation(s) in RCA: 78] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A prototype continuous-flow liquid-liquid extraction system is reported. By harnessing several open-source software libraries, a computer control script was written using the Python programming language. Using a 'computer-vision' approach, this allowed the computer to monitor the interface level between the organic and aqueous phases using a simple webcam setup and (by dynamically controlling pump flow rate) to keep this interface within defined limits. The system enabled the efficient 'inline' extraction of excess reagent in hydrazone formations, dithiane formations and epoxidations. The initial results of dispersion measurement are also presented.
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Affiliation(s)
- Matthew O'Brien
- Whiffen Laboratory, Department of Chemistry, University of Cambridge, Cambridge, UK. m.o’
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