1
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Doyran Ince O, Tekin HC. MagSity platform: a hybrid magnetic levitation-based lensless holographic microscope platform for liquid density and viscosity measurements. LAB ON A CHIP 2025. [PMID: 40125580 DOI: 10.1039/d5lc00144g] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 03/25/2025]
Abstract
The viscosity and density of liquids are the most extensively studied material properties, as their accurate measurement is critical in various industries. Although developments in micro-viscometers have overcome the limitations of traditional bulky methods, more accessible technologies are required. Here, we introduce a novel magnetic levitation-based method to measure the viscosity and density of solutions in a microcapillary channel. This principle exploits microparticles as microsensors to correlate levitation time and height with solutions' viscosity and density, using buoyancy and drag forces. The platform has an integrated lensless holographic microscope, providing a hybrid system for in situ and precise measurements. By utilizing this hybrid technology, portable, rapid and cost-effective measurements can be conducted. This platform enables viscosity and density measurements within 7 minutes, achieving high accuracies of at least 97.7% and 99.9%, respectively, across an operation range of 0.84-5.09 cP and 1.00-1.09 g cm-3. The platform is utilized to clearly distinguish differences in the spent cell culture medium across various cell lines. This method, as presented, can be readily applied to measure a diverse array of liquids in multiple domains, encompassing biotechnology, medicine, and engineering.
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Affiliation(s)
- Oyku Doyran Ince
- Department of Bioengineering, Izmir Institute of Technology, Izmir 35430, Türkiye.
| | - H Cumhur Tekin
- Department of Bioengineering, Izmir Institute of Technology, Izmir 35430, Türkiye.
- METU MEMS Center, Ankara 06520, Türkiye
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2
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Anil-Inevi M, Ozcivici E. Ring Magnet-Guided Magnetic Manipulation for Biofabrication of 3D Cellular Structures. Methods Mol Biol 2025. [PMID: 39776076 DOI: 10.1007/7651_2024_597] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2025]
Abstract
Negative magnetophoresis is employed to levitate cells in a paramagnetic medium without the need for magnetic labeling, preserving their natural state and minimizing toxicity. The single-ring magnet configuration that provides an open space in the levitation chamber enhances culture accessibility and scalability, enabling the formation of millimeter-sized 3D structures through cellular self-assembly. This system provides a versatile and cost-effective approach for diverse applications, including tissue engineering and biofabrication. This protocol outlines a method for biofabrication and maintenance of 3D cellular structures using magnetic levitation with a ring magnet-based setup.
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Affiliation(s)
- Muge Anil-Inevi
- Department of Bioengineering, Izmir Institute of Technology, Izmir, Turkey
| | - Engin Ozcivici
- Department of Bioengineering, Izmir Institute of Technology, Izmir, Turkey.
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3
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Kecili S, Kaymaz SV, Ozogul B, Tekin HC, Elitas M. Investigating influences of intravenous fluids on HUVEC and U937 monocyte cell lines using the magnetic levitation method. Analyst 2023; 148:5588-5596. [PMID: 37872817 DOI: 10.1039/d3an01304a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2023]
Abstract
Intravenous fluids are being widely used in patients of all ages for preventing or treating dehydration in the intensive care units, surgeries in the operation rooms, or administering chemotherapeutic drugs at hospitals. Dextrose, Ringer, and NaCl solutions are widely received as intravenous fluids by hospitalized patients. Despite their widespread administration for over 100 years, studies on their influences on different cell types have been very limited. Increasing evidence suggests that treatment outcomes might be altered by the choice of the administered intravenous fluids. In this study, we investigated the influences of intravenous fluids on human endothelial (HUVEC) and monocyte (U937) cell lines using the magnetic levitation technique. Our magnetic levitation platform provides label-free manipulation of single cells without altering their phenotypic or genetic properties. It allows for monitoring and quantifying behavior of single cells by measuring their levitation heights, deformation indices, and areas. Our results indicate that HUVEC and U937 cell lines respond differently to different intravenous fluids. Dextrose solution decreased the viability of both cell lines while increasing the heterogeneity of areas, deformation, and levitation heights of HUVEC cells. We strongly believe that improved outcomes can be achieved when the influences of intravenous fluids on different cell types are revealed using robust, label-free, and efficient methods.
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Affiliation(s)
- Seren Kecili
- Department of Bioengineering, Izmir Institute of Technology, Izmir 35430, Turkey.
| | - Sumeyra Vural Kaymaz
- Faculty of Engineering and Natural Sciences, Sabanci University, Istanbul, 34956, Turkey.
| | - Beyzanur Ozogul
- Faculty of Engineering and Natural Sciences, Sabanci University, Istanbul, 34956, Turkey.
| | - H Cumhur Tekin
- Department of Bioengineering, Izmir Institute of Technology, Izmir 35430, Turkey.
- METU MEMS Center, Ankara, 06530, Turkey
| | - Meltem Elitas
- Faculty of Engineering and Natural Sciences, Sabanci University, Istanbul, 34956, Turkey.
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4
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Tepe U, Aslanbay Guler B, Imamoglu E. Applications and sensory utilizations of magnetic levitation in 3D cell culture for tissue Engineering. Mol Biol Rep 2023; 50:7017-7025. [PMID: 37378748 DOI: 10.1007/s11033-023-08585-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2023] [Accepted: 06/07/2023] [Indexed: 06/29/2023]
Abstract
3D cell culture approaches are cell culture methods that provide good visualization of interactions between cells while preserving the natural growth pattern. In recent years, several studies have managed to implement magnetic levitation technology on 3D cell culture applications by either combining cells with magnetic nanoparticles (positive magnetophoresis) or applying a magnetic field directly to the cells in a high-intensity medium (negative magnetophoresis). The positive magnetophoresis technique consists of integrating magnetic nanoparticles into the cells, while the negative magnetophoresis technique consists of levitating the cells without labelling them with magnetic nanoparticles. Magnetic levitation methods can be used to manipulate 3D culture, provide more complex habitats and custom control, or display density data as a sensor.The present review aims to show the advantages, limitations, and promises of magnetic 3D cell culture, along with its application methods, tools, and capabilities as a density sensor. In this context, the promising magnetic levitation technique on 3D cell cultures could be fully utilized in further studies with precise control.
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Affiliation(s)
- Ugur Tepe
- Faculty of Engineering, Department of Bioengineering, Ege University, Izmir, Turkey
| | - Bahar Aslanbay Guler
- Faculty of Engineering, Department of Bioengineering, Ege University, Izmir, Turkey
| | - Esra Imamoglu
- Faculty of Engineering, Department of Bioengineering, Ege University, Izmir, Turkey.
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5
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Ashkarran AA, Gharibi H, Zeki DA, Radu I, Khalighinejad F, Keyhanian K, Abrahamsson CK, Ionete C, Saei AA, Mahmoudi M. Multi-omics analysis of magnetically levitated plasma biomolecules. Biosens Bioelectron 2023; 220:114862. [PMID: 36403493 PMCID: PMC9750732 DOI: 10.1016/j.bios.2022.114862] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2022] [Revised: 10/12/2022] [Accepted: 10/24/2022] [Indexed: 11/06/2022]
Abstract
We recently discovered that superparamagnetic iron oxide nanoparticles (SPIONs) can levitate plasma biomolecules in the magnetic levitation (MagLev) system and cause formation of ellipsoidal biomolecular bands. To better understand the composition of the levitated biomolecules in various bands, we comprehensively characterized them by multi-omics analyses. To probe whether the biomolecular composition of the levitated ellipsoidal bands correlates with the health of plasma donors, we used plasma from individuals who had various types of multiple sclerosis (MS), as a model disease with significant clinical importance. Our findings reveal that, while the composition of proteins does not show much variability, there are significant differences in the lipidome and metabolome profiles of each magnetically levitated ellipsoidal band. By comparing the lipidome and metabolome compositions of various plasma samples, we found that the levitated biomolecular ellipsoidal bands do contain information on the health status of the plasma donors. More specifically, we demonstrate that there are particular lipids and metabolites in various layers of each specific plasma pattern that significantly contribute to the discrimination of different MS subtypes, i.e., relapsing-remitting MS (RRMS), secondary-progressive MS (SPMS), and primary-progressive MS (PPMS). These findings will pave the way for utilization of MagLev of biomolecules in biomarker discovery for identification of diseases and discrimination of their subtypes.
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Affiliation(s)
- Ali Akbar Ashkarran
- Department of Radiology and Precision Health Program, Michigan State University, East Lansing, MI, USA
| | - Hassan Gharibi
- Division of Physiological Chemistry I, Department of Medical Biochemistry and Biophysics, Karolinska Institutet, SE-17 177, Stockholm, Sweden
| | - Dalia Abou Zeki
- Department of Neurology, University of Massachusetts, Worcester, MA, USA
| | - Irina Radu
- Department of Neurology, University of Massachusetts, Worcester, MA, USA
| | | | - Kiandokht Keyhanian
- Department of Neurology, Beth Israel Deaconess Medical Center, Boston, MA, USA
| | | | - Carolina Ionete
- Department of Neurology, University of Massachusetts, Worcester, MA, USA.
| | - Amir Ata Saei
- Division of Physiological Chemistry I, Department of Medical Biochemistry and Biophysics, Karolinska Institutet, SE-17 177, Stockholm, Sweden.
| | - Morteza Mahmoudi
- Department of Radiology and Precision Health Program, Michigan State University, East Lansing, MI, USA.
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6
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Doan-Nguyen TP, Crespy D. Advanced density-based methods for the characterization of materials, binding events, and kinetics. Chem Soc Rev 2022; 51:8612-8651. [PMID: 36172819 DOI: 10.1039/d1cs00232e] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Investigations of the densities of chemicals and materials bring valuable insights into the fundamental understanding of matter and processes. Recently, advanced density-based methods have been developed with wide measurement ranges (i.e. 0-23 g cm-3), high resolutions (i.e. 10-6 g cm-3), compatibility with different types of samples and the requirement of extremely low volumes of sample (as low as a single cell). Certain methods, such as magnetic levitation, are inexpensive, portable and user-friendly. Advanced density-based methods are, therefore, beneficially used to obtain absolute density values, composition of mixtures, characteristics of binding events, and kinetics of chemical and biological processes. Herein, the principles and applications of magnetic levitation, acoustic levitation, electrodynamic balance, aqueous multiphase systems, and suspended microchannel resonators for materials science are discussed.
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Affiliation(s)
- Thao P Doan-Nguyen
- Max Planck-VISTEC Partner Laboratory for Sustainable Materials, Vidyasirimedhi Institute of Science and Technology (VISTEC), Rayong 21210, Thailand. .,Department of Materials Science and Engineering, School of Molecular Science and Engineering, Vidyasirimedhi Institute of Science and Technology (VISTEC), Rayong 21210, Thailand
| | - Daniel Crespy
- Max Planck-VISTEC Partner Laboratory for Sustainable Materials, Vidyasirimedhi Institute of Science and Technology (VISTEC), Rayong 21210, Thailand. .,Department of Materials Science and Engineering, School of Molecular Science and Engineering, Vidyasirimedhi Institute of Science and Technology (VISTEC), Rayong 21210, Thailand
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7
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Frequency-specific sensitivity of 3T3-L1 preadipocytes to low-intensity vibratory stimulus during adipogenesis. In Vitro Cell Dev Biol Anim 2022; 58:452-461. [PMID: 35713773 DOI: 10.1007/s11626-022-00696-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2022] [Accepted: 05/20/2022] [Indexed: 11/05/2022]
Abstract
Adipocyte accumulation in the bone marrow is a severe complication leading to bone defects and reduced regenerative capacity. Application of external mechanical signals to bone marrow cellular niche is a non-invasive and non-pharmaceutical methodology to improve osteogenesis and suppress adipogenesis. However, in the literature, the specific parameters related to the nature of low-intensity vibratory (LIV) signals appear to be arbitrarily selected for amplitude, bouts, and applied frequency. In this study, we performed a LIV frequency sweep ranging from 30 to 120 Hz with increments of 15 Hz applied onto preadipocytes during adipogenesis for 10 d. We addressed the effect of LIV with different frequencies on single-cell density, adipogenic gene expression, lipid morphology, and triglycerides content. Results showed that LIV signals with 75-Hz frequency had the most significant suppressive effect during adipogenesis. Our results support the premise that mechanical-based interventions for suppressing adipogenesis may benefit from optimizing input parameters.
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8
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BASKAN OZNUR, OZCIVICI ENGIN. VIABILITY OF 3T3-L1 PREADIPOCYTES IS MODULATED BY THE APPLIED FREQUENCY BUT NOT THE EXPOSURE DURATION OF LOW INTENSITY VIBRATORY STIMULATION. J MECH MED BIOL 2022. [DOI: 10.1142/s0219519422500063] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
Mechanical forces are the integral determinants in cell and tissue homeostasis and regeneration, and they can affect numerous biological process from proliferation to fate determination. Mechanical forces that possess low magnitude and high frequency characteristics are also known as low intensity vibrations (LIVs). These signals were studied widely on many cell types for regenerative purposes, however most of these studies select components of LIV signals (e.g., magnitude, frequency, duration, etc.) arbitrarily. Here, we addressed the effect of LIV applied frequency, LIV daily exposure time and fate induction on the viability of preadipocyte 3T3-L1 cells. For this, we performed a frequency sweep that was ranging from 30[Formula: see text]Hz to 120[Formula: see text]Hz with 15[Formula: see text]Hz increments applied for 5, 10 or 20[Formula: see text]min during quiescent growth or adipogenesis for up to 10 days. Results suggest that the applied frequency and fate induction was an important determinant of cell viability while daily exposure time had no effect. These findings contribute to the effort of optimizing a relevant mechanical stimulus that can inhibit adipogenesis.
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Affiliation(s)
- OZNUR BASKAN
- Department of Bioengineering, Izmir Institute of Technology Urla, Izmir 35430, Turkey
| | - ENGIN OZCIVICI
- Department of Bioengineering, Izmir Institute of Technology Urla, Izmir 35430, Turkey
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9
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Abstract
Magnetic cell separation has become a key methodology for the isolation of target cell populations from biological suspensions, covering a wide spectrum of applications from diagnosis and therapy in biomedicine to environmental applications or fundamental research in biology. There now exists a great variety of commercially available separation instruments and reagents, which has permitted rapid dissemination of the technology. However, there is still an increasing demand for new tools and protocols which provide improved selectivity, yield and sensitivity of the separation process while reducing cost and providing a faster response. This review aims to introduce basic principles of magnetic cell separation for the neophyte, while giving an overview of recent research in the field, from the development of new cell labeling strategies to the design of integrated microfluidic cell sorters and of point-of-care platforms combining cell selection, capture, and downstream detection. Finally, we focus on clinical, industrial and environmental applications where magnetic cell separation strategies are amongst the most promising techniques to address the challenges of isolating rare cells.
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10
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Dabbagh SR, Alseed MM, Saadat M, Sitti M, Tasoglu S. Biomedical Applications of Magnetic Levitation. ADVANCED NANOBIOMED RESEARCH 2021. [DOI: 10.1002/anbr.202100103] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022] Open
Affiliation(s)
- Sajjad Rahmani Dabbagh
- Department of Mechanical Engineering Koç University Sariyer Istanbul Turkey 34450
- Koç University Arçelik Research Center for Creative Industries (KUAR) Koç University Sariyer Istanbul Turkey 34450
| | - M. Munzer Alseed
- Institute of Biomedical Engineering Boğaziçi University Çengelköy Istanbul Turkey 34684
| | - Milad Saadat
- Department of Mechanical Engineering Koç University Sariyer Istanbul Turkey 34450
| | - Metin Sitti
- Department of Mechanical Engineering Koç University Sariyer Istanbul Turkey 34450
- School of Medicine Koç University Istanbul 34450 Turkey
- Physical Intelligence Department Max Planck Institute for Intelligent Systems 70569 Stuttgart Germany
| | - Savas Tasoglu
- Department of Mechanical Engineering Koç University Sariyer Istanbul Turkey 34450
- Koç University Arçelik Research Center for Creative Industries (KUAR) Koç University Sariyer Istanbul Turkey 34450
- Institute of Biomedical Engineering Boğaziçi University Çengelköy Istanbul Turkey 34684
- Physical Intelligence Department Max Planck Institute for Intelligent Systems 70569 Stuttgart Germany
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11
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Anil-Inevi M, Delikoyun K, Mese G, Tekin HC, Ozcivici E. Magnetic levitation assisted biofabrication, culture, and manipulation of 3D cellular structures using a ring magnet based setup. Biotechnol Bioeng 2021; 118:4771-4785. [PMID: 34559409 DOI: 10.1002/bit.27941] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/14/2021] [Revised: 09/03/2021] [Accepted: 09/19/2021] [Indexed: 12/13/2022]
Abstract
Diamagnetic levitation is an emerging technology for remote manipulation of cells in cell and tissue level applications. Low-cost magnetic levitation configurations using permanent magnets are commonly composed of a culture chamber physically sandwiched between two block magnets that limit working volume and applicability. This work describes a single ring magnet-based magnetic levitation system to eliminate physical limitations for biofabrication. Developed configuration utilizes sample culture volume for construct size manipulation and long-term maintenance. Furthermore, our configuration enables convenient transfer of liquid or solid phases during the levitation. Before biofabrication, we first calibrated/ the platform for levitation with polymeric beads, considering the single cell density range of viable cells. By taking advantage of magnetic focusing and cellular self-assembly, millimeter-sized 3D structures were formed and maintained in the system allowing easy and on-site intervention in cell culture with an open operational space. We demonstrated that the levitation protocol could be adapted for levitation of various cell types (i.e., stem cell, adipocyte and cancer cell) representing cells of different densities by modifying the paramagnetic ion concentration that could be also reduced by manipulating the density of the medium. This technique allowed the manipulation and merging of separately formed 3D biological units, as well as the hybrid biofabrication with biopolymers. In conclusion, we believe that this platform will serve as an important tool in broad fields such as bottom-up tissue engineering, drug discovery and developmental biology.
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Affiliation(s)
- Muge Anil-Inevi
- Department of Bioengineering, Izmir Institute of Technology, Izmir, Turkey
| | - Kerem Delikoyun
- Department of Bioengineering, Izmir Institute of Technology, Izmir, Turkey
| | - Gulistan Mese
- Department of Molecular Biology and Genetics, Izmir Institute of Technology, Izmir, Turkey
| | - H Cumhur Tekin
- Department of Bioengineering, Izmir Institute of Technology, Izmir, Turkey
| | - Engin Ozcivici
- Department of Bioengineering, Izmir Institute of Technology, Izmir, Turkey
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12
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Delikoyun K, Yaman S, Yilmaz E, Sarigil O, Anil-Inevi M, Telli K, Yalcin-Ozuysal O, Ozcivici E, Tekin HC. HologLev: A Hybrid Magnetic Levitation Platform Integrated with Lensless Holographic Microscopy for Density-Based Cell Analysis. ACS Sens 2021; 6:2191-2201. [PMID: 34124887 DOI: 10.1021/acssensors.0c02587] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
In clinical practice, a variety of diagnostic applications require the identification of target cells. Density has been used as a physical marker to distinguish cell populations since metabolic activities could alter the cell densities. Magnetic levitation offers great promise for separating cells at the single cell level within heterogeneous populations with respect to cell densities. Traditional magnetic levitation platforms need bulky and precise optical microscopes to visualize levitated cells. Moreover, the evaluation process of cell densities is cumbersome, which also requires trained personnel for operation. In this work, we introduce a device (HologLev) as a fusion of the magnetic levitation principle and lensless digital inline holographic microscopy (LDIHM). LDIHM provides ease of use by getting rid of bulky and expensive optics. By placing an imaging sensor just beneath the microcapillary channel without any lenses, recorded holograms are processed for determining cell densities through a fully automated digital image processing scheme. The device costs less than $100 and has a compact design that can fit into a pocket. We perform viability tests on the device by levitating three different cell lines (MDA-MB-231, U937, D1 ORL UVA) and comparing them against their dead correspondents. We also tested the differentiation of mouse osteoblastic (7F2) cells by monitoring characteristic variations in their density. Last, the response of MDA-MB-231 cancer cells to a chemotherapy drug was demonstrated in our platform. HologLev provides cost-effective, label-free, fully automated cell analysis in a compact design that could be highly desirable for laboratory and point-of-care testing applications.
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Affiliation(s)
- Kerem Delikoyun
- Faculty of Engineering, Department of Bioengineering, Izmir Institute of Technology, Urla, Izmir 35430, Turkey
| | - Sena Yaman
- Faculty of Engineering, Department of Bioengineering, Izmir Institute of Technology, Urla, Izmir 35430, Turkey
| | - Esra Yilmaz
- Faculty of Engineering, Department of Bioengineering, Izmir Institute of Technology, Urla, Izmir 35430, Turkey
| | - Oyku Sarigil
- Faculty of Engineering, Department of Bioengineering, Izmir Institute of Technology, Urla, Izmir 35430, Turkey
| | - Muge Anil-Inevi
- Faculty of Engineering, Department of Bioengineering, Izmir Institute of Technology, Urla, Izmir 35430, Turkey
| | - Kubra Telli
- Faculty of Science, Department of Molecular Biology and Genetics, Izmir Institute of Technology, Urla, Izmir 35430, Turkey
| | - Ozden Yalcin-Ozuysal
- Faculty of Science, Department of Molecular Biology and Genetics, Izmir Institute of Technology, Urla, Izmir 35430, Turkey
| | - Engin Ozcivici
- Faculty of Engineering, Department of Bioengineering, Izmir Institute of Technology, Urla, Izmir 35430, Turkey
| | - H. Cumhur Tekin
- Faculty of Engineering, Department of Bioengineering, Izmir Institute of Technology, Urla, Izmir 35430, Turkey
- METU MEMS Center, Ankara 06520, Turkey
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13
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Deshmukh SS, Shakya B, Chen A, Durmus NG, Greenhouse B, Egan ES, Demirci U. Multiparametric biophysical profiling of red blood cells in malaria infection. Commun Biol 2021; 4:697. [PMID: 34103669 PMCID: PMC8187722 DOI: 10.1038/s42003-021-02181-3] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/28/2020] [Accepted: 04/29/2021] [Indexed: 11/22/2022] Open
Abstract
Biophysical separation promises label-free, less-invasive methods to manipulate the diverse properties of live cells, such as density, magnetic susceptibility, and morphological characteristics. However, some cellular changes are so minute that they are undetectable by current methods. We developed a multiparametric cell-separation approach to profile cells with simultaneously changing density and magnetic susceptibility. We demonstrated this approach with the natural biophysical phenomenon of Plasmodium falciparum infection, which modifies its host erythrocyte by simultaneously decreasing density and increasing magnetic susceptibility. Current approaches have used these properties separately to isolate later-stage infected cells, but not in combination. We present biophysical separation of infected erythrocytes by balancing gravitational and magnetic forces to differentiate infected cell stages, including early stages for the first time, using magnetic levitation. We quantified height distributions of erythrocyte populations-27 ring-stage synchronized samples and 35 uninfected controls-and quantified their unique biophysical signatures. This platform can thus enable multidimensional biophysical measurements on unique cell types.
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Affiliation(s)
- Shreya S Deshmukh
- Department of Bioengineering, Stanford University Schools of Engineering and Medicine, Stanford, CA, USA
- Canary Center for Early Cancer Detection, Department of Radiology, Stanford University School of Medicine, Palo Alto, CA, USA
| | - Bikash Shakya
- Department of Pediatrics; Department of Microbiology and Immunology, Stanford University School of Medicine, Stanford, CA, USA
| | - Anna Chen
- Department of Medicine, University of California San Francisco, San Francisco, CA, USA
| | - Naside Gozde Durmus
- Department of Radiology, Stanford University School of Medicine, Palo Alto, CA, USA
| | - Bryan Greenhouse
- Department of Medicine, University of California San Francisco, San Francisco, CA, USA
| | - Elizabeth S Egan
- Department of Pediatrics; Department of Microbiology and Immunology, Stanford University School of Medicine, Stanford, CA, USA
| | - Utkan Demirci
- Canary Center for Early Cancer Detection, Department of Radiology, Stanford University School of Medicine, Palo Alto, CA, USA.
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14
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Sarigil O, Anil-Inevi M, Firatligil-Yildirir B, Unal YC, Yalcin-Ozuysal O, Mese G, Tekin HC, Ozcivici E. Scaffold-free biofabrication of adipocyte structures with magnetic levitation. Biotechnol Bioeng 2020; 118:1127-1140. [PMID: 33205833 DOI: 10.1002/bit.27631] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2020] [Revised: 10/27/2020] [Accepted: 11/15/2020] [Indexed: 12/16/2022]
Abstract
Tissue engineering research aims to repair the form and/or function of impaired tissues. Tissue engineering studies mostly rely on scaffold-based techniques. However, these techniques have certain challenges, such as the selection of proper scaffold material, including mechanical properties, sterilization, and fabrication processes. As an alternative, we propose a novel scaffold-free adipose tissue biofabrication technique based on magnetic levitation. In this study, a label-free magnetic levitation technique was used to form three-dimensional (3D) scaffold-free adipocyte structures with various fabrication strategies in a microcapillary-based setup. Adipogenic-differentiated 7F2 cells and growth D1 ORL UVA stem cells were used as model cells. The morphological properties of the 3D structures of single and cocultured cells were analyzed. The developed procedure leads to the formation of different patterns of single and cocultured adipocytes without a scaffold. Our results indicated that adipocytes formed loose structures while growth cells were tightly packed during 3D culture in the magnetic levitation platform. This system has potential for ex vivo modeling of adipose tissue for drug testing and transplantation applications for cell therapy in soft tissue damage. Also, it will be possible to extend this technique to other cell and tissue types.
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Affiliation(s)
- Oyku Sarigil
- Department of Bioengineering, Izmir Institute of Technology, Urla, Izmir, Turkey
| | - Muge Anil-Inevi
- Department of Bioengineering, Izmir Institute of Technology, Urla, Izmir, Turkey
| | | | - Yagmur Ceren Unal
- Department of Molecular Biology and Genetics, Izmir Institute of Technology, Urla, Izmir, Turkey
| | - Ozden Yalcin-Ozuysal
- Department of Molecular Biology and Genetics, Izmir Institute of Technology, Urla, Izmir, Turkey
| | - Gulistan Mese
- Department of Molecular Biology and Genetics, Izmir Institute of Technology, Urla, Izmir, Turkey
| | - H Cumhur Tekin
- Department of Bioengineering, Izmir Institute of Technology, Urla, Izmir, Turkey
| | - Engin Ozcivici
- Department of Bioengineering, Izmir Institute of Technology, Urla, Izmir, Turkey
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15
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Liang W, Austin RH, Sturm JC. Scaling of deterministic lateral displacement devices to a single column of bumping obstacles. LAB ON A CHIP 2020; 20:3461-3467. [PMID: 32930700 PMCID: PMC11587867 DOI: 10.1039/d0lc00570c] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/11/2023]
Abstract
We describe a deterministic lateral displacement (DLD) for particle separation with only a single column of bumping features. The bifurcation of fluid streams at obstacles is not set by the "tilt" of columns with respect to macroscopic current flow, but rather by the fluidic resistances for lateral flow at each obstacle. With one column of 14 bumping features and corresponding inlet/outlet channels, the single-column DLD can separate particles with diameters of 4.8 μm and 9.9 μm at 30 μL min-1, with an area of only 0.37 mm × 1.5 mm (0.55 mm2). The large-cell output contains over 99% of the 9.9 μm particles and only 0.2% of the 4.8 m particles. The throughput per area of 54 μL min-1 per mm2 represents a 10× increase over previous selective harvesting reports for microfluidic devices in a similar particle size range.
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Affiliation(s)
- Weibin Liang
- Princeton Institute for Science and Technology of Materials (PRISM), Princeton, New Jersey 08544, USA.
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16
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Yaman S, Tekin HC. Magnetic Susceptibility-Based Protein Detection Using Magnetic Levitation. Anal Chem 2020; 92:12556-12563. [DOI: 10.1021/acs.analchem.0c02479] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Affiliation(s)
- Sena Yaman
- Department of Bioengineering, Izmir Institute of Technology, Izmir 35430, Turkey
| | - H. Cumhur Tekin
- Department of Bioengineering, Izmir Institute of Technology, Izmir 35430, Turkey
- METU MEMS Center, Ankara 06520, Turkey
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17
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Ge S, Nemiroski A, Mirica KA, Mace CR, Hennek JW, Kumar AA, Whitesides GM. Magnetic Levitation in Chemistry, Materials Science, and Biochemistry. Angew Chem Int Ed Engl 2020; 59:17810-17855. [PMID: 31165560 DOI: 10.1002/anie.201903391] [Citation(s) in RCA: 48] [Impact Index Per Article: 9.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/19/2019] [Indexed: 12/25/2022]
Abstract
All matter has density. The recorded uses of density to characterize matter date back to as early as ca. 250 BC, when Archimedes was believed to have solved "The Puzzle of The King's Crown" using density.[1] Today, measurements of density are used to separate and characterize a range of materials (including cells and organisms), and their chemical and/or physical changes in time and space. This Review describes a density-based technique-magnetic levitation (which we call "MagLev" for simplicity)-developed and used to solve problems in the fields of chemistry, materials science, and biochemistry. MagLev has two principal characteristics-simplicity, and applicability to a wide range of materials-that make it useful for a number of applications (for example, characterization of materials, quality control of manufactured plastic parts, self-assembly of objects in 3D, separation of different types of biological cells, and bioanalyses). Its simplicity and breadth of applications also enable its use in low-resource settings (for example-in economically developing regions-in evaluating water/food quality, and in diagnosing disease).
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Affiliation(s)
- Shencheng Ge
- Department of Chemistry & Chemical Biology, Harvard University, 12 Oxford Street, Cambridge, MA, 02138, USA
| | - Alex Nemiroski
- Department of Chemistry & Chemical Biology, Harvard University, 12 Oxford Street, Cambridge, MA, 02138, USA
| | - Katherine A Mirica
- Department of Chemistry & Chemical Biology, Harvard University, 12 Oxford Street, Cambridge, MA, 02138, USA
| | - Charles R Mace
- Department of Chemistry & Chemical Biology, Harvard University, 12 Oxford Street, Cambridge, MA, 02138, USA
| | - Jonathan W Hennek
- Department of Chemistry & Chemical Biology, Harvard University, 12 Oxford Street, Cambridge, MA, 02138, USA
| | - Ashok A Kumar
- Department of Chemistry & Chemical Biology, Harvard University, 12 Oxford Street, Cambridge, MA, 02138, USA
| | - George M Whitesides
- Department of Chemistry & Chemical Biology, Harvard University, 12 Oxford Street, Cambridge, MA, 02138, USA.,Wyss Institute for Biologically Inspired Engineering, Harvard University, 60 Oxford Street, Cambridge, MA, 02138, USA.,Kavli Institute for Bionano Science & Technology, Harvard University, 29 Oxford Street, Cambridge, MA, 02138, USA
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18
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Ge S, Nemiroski A, Mirica KA, Mace CR, Hennek JW, Kumar AA, Whitesides GM. Magnetische Levitation in Chemie, Materialwissenschaft und Biochemie. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.201903391] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Affiliation(s)
- Shencheng Ge
- Department of Chemistry & Chemical Biology Harvard University 12 Oxford Street Cambridge MA 02138 USA
| | - Alex Nemiroski
- Department of Chemistry & Chemical Biology Harvard University 12 Oxford Street Cambridge MA 02138 USA
| | - Katherine A. Mirica
- Department of Chemistry & Chemical Biology Harvard University 12 Oxford Street Cambridge MA 02138 USA
| | - Charles R. Mace
- Department of Chemistry & Chemical Biology Harvard University 12 Oxford Street Cambridge MA 02138 USA
| | - Jonathan W. Hennek
- Department of Chemistry & Chemical Biology Harvard University 12 Oxford Street Cambridge MA 02138 USA
| | - Ashok A. Kumar
- Department of Chemistry & Chemical Biology Harvard University 12 Oxford Street Cambridge MA 02138 USA
| | - George M. Whitesides
- Department of Chemistry & Chemical Biology Harvard University 12 Oxford Street Cambridge MA 02138 USA
- Wyss Institute for Biologically Inspired Engineering Harvard University 60 Oxford Street Cambridge MA 02138 USA
- Kavli Institute for Bionano Science & Technology Harvard University 29 Oxford Street Cambridge MA 02138 USA
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19
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Zhang C, Zhao P, Gu F, Zhang X, Xie J, He Y, Zhou H, Fu J, Turng LS. Axial-Circular Magnetic Levitation: A Three-Dimensional Density Measurement and Manipulation Approach. Anal Chem 2020; 92:6925-6931. [PMID: 32233357 DOI: 10.1021/acs.analchem.9b05606] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
Abstract
Magnetic levitation (MagLev) is a promising technology for density-based analysis and manipulation of diamagnetic objects of various physical forms. However, one major drawback is that MagLev can be performed only along the central axis (one-dimensional MagLev), thereby leading to (i) no knowledge about the magnetic field in regions other than the axial region, (ii) inability to handle objects of similar densities, because they are aggregated in the axial region, and (iii) objects that can be manipulated (e.g., separated or assembled) in only one single direction, that is, the axial direction. This work explores a novel approach called "axial-circular MagLev" to expand the operational space from one dimension to three dimensions, enabling substances to be stably levitated in both the axial and circular regions. Without noticeably sacrificing the total density measurement range, the highest sensitivity of the axial-circular MagLev device can be adjusted up to 1.5 × 104 mm/(g/cm3), approximately 115× better than that of the standard MagLev of two square magnets. Being able to fully utilize the operational space gives this approach greater maneuverability, as the three-dimensional self-assembly of controllable ring-shaped structures is demonstrated. Full space utilization extends the applicability of MagLev to bioengineering, pharmaceuticals, and advanced manufacturing.
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Affiliation(s)
| | | | | | | | | | | | - Huamin Zhou
- State Key Laboratory of Material Processing and Die & Mould Technology, Huazhong University of Science & Technology, Wuhan 430074, China
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20
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A Reliable Flow-Based Method for the Accurate Measure of Mass Density, Size and Weight of Live 3D Tumor Spheroids. MICROMACHINES 2020; 11:mi11050465. [PMID: 32354148 PMCID: PMC7281630 DOI: 10.3390/mi11050465] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/23/2020] [Revised: 04/23/2020] [Accepted: 04/28/2020] [Indexed: 12/12/2022]
Abstract
Gathering precise information on mass density, size and weight of cells or cell aggregates, is crucial for applications in many biomedical fields with a specific focus on cancer research. Although few technical solutions have been presented for single-cell analysis, literature does not cover this aspect for 3D models such as spheroids. Since the research interest on such samples is notably rising, here we describe a flow-apparatus, and the associated physical method and operative protocol for the accurate measurements of mass density, size and weight. The technique is based on the detection of the terminal velocity of a free-falling sample into a specifically conceived analysis flow-channel. Moreover, in order to demonstrate the accuracy and precision of the presented flow-device, analyses were initially carried out on standardized polystyrene beads. Finally, to display the application of the proposed system for biological samples, mass density, size and weight of live SW620 tumor spheroids were analyzed. The combined measurements of such parameters can represent a step toward a deeper understanding of 3D culture models.
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21
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Anil-Inevi M, Yilmaz E, Sarigil O, Tekin HC, Ozcivici E. Single Cell Densitometry and Weightlessness Culture of Mesenchymal Stem Cells Using Magnetic Levitation. Methods Mol Biol 2020; 2125:15-25. [PMID: 31020635 DOI: 10.1007/7651_2019_231] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
Magnetic levitation methodology enables density-based separation of microparticles/cells and sustains cell culture in different media. Levitation process can be accomplished via negative magnetophoresis (diamagnetophoresis), where the applied magnetic force compensates gravitational acceleration and the density of the diamagnetic object (e.g., cell) determines its levitation height. Here we describe a portable, sensitive, and cost-effective technology that uses the principles of magnetic levitation to measure single cell density and cell culture under desired conditions.
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Affiliation(s)
- Muge Anil-Inevi
- Department of Bioengineering, Izmir Institute of Technology, Urla, Izmir, Turkey
| | - Esra Yilmaz
- Department of Bioengineering, Izmir Institute of Technology, Urla, Izmir, Turkey
| | - Oyku Sarigil
- Department of Bioengineering, Izmir Institute of Technology, Urla, Izmir, Turkey
| | - H Cumhur Tekin
- Department of Bioengineering, Izmir Institute of Technology, Urla, Izmir, Turkey.
| | - Engin Ozcivici
- Department of Bioengineering, Izmir Institute of Technology, Urla, Izmir, Turkey.
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22
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Stem Cell Culture Under Simulated Microgravity. ADVANCES IN EXPERIMENTAL MEDICINE AND BIOLOGY 2020; 1298:105-132. [PMID: 32424490 DOI: 10.1007/5584_2020_539] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
Challenging environment of space causes several pivotal alterations in living systems, especially due to microgravity. The possibility of simulating microgravity by ground-based systems provides research opportunities that may lead to the understanding of in vitro biological effects of microgravity by eliminating the challenges inherent to spaceflight experiments. Stem cells are one of the most prominent cell types, due to their self-renewal and differentiation capabilities. Research on stem cells under simulated microgravity has generated many important findings, enlightening the impact of microgravity on molecular and cellular processes of stem cells with varying potencies. Simulation techniques including clinostat, random positioning machine, rotating wall vessel and magnetic levitation-based systems have improved our knowledge on the effects of microgravity on morphology, migration, proliferation and differentiation of stem cells. Clarification of the mechanisms underlying such changes offers exciting potential for various applications such as identification of putative therapeutic targets to modulate stem cell function and stem cell based regenerative medicine.
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23
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Baskan O, Karadas O, Mese G, Ozcivici E. Applicability of Low-intensity Vibrations as a Regulatory Factor on Stem and Progenitor Cell Populations. Curr Stem Cell Res Ther 2019; 15:391-399. [PMID: 31830894 DOI: 10.2174/1574888x14666191212155647] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2019] [Revised: 09/26/2019] [Accepted: 11/01/2019] [Indexed: 02/07/2023]
Abstract
Persistent and transient mechanical loads can act as biological signals on all levels of an organism. It is therefore not surprising that most cell types can sense and respond to mechanical loads, similar to their interaction with biochemical and electrical signals. The presence or absence of mechanical forces can be an important determinant of form, function and health of many tissue types. Along with naturally occurring mechanical loads, it is possible to manipulate and apply external physical loads on tissues in biomedical sciences, either for prevention or treatment of catabolism related to many factors, including aging, paralysis, sedentary lifestyles and spaceflight. Mechanical loads consist of many components in their applied signal form such as magnitude, frequency, duration and intervals. Even though high magnitude mechanical loads with low frequencies (e.g. running or weight lifting) induce anabolism in musculoskeletal tissues, their applicability as anabolic agents is limited because of the required compliance and physical health of the target population. On the other hand, it is possible to use low magnitude and high frequency (e.g. in a vibratory form) mechanical loads for anabolism as well. Cells, including stem cells of the musculoskeletal tissue, are sensitive to high frequency, lowintensity mechanical signals. This sensitivity can be utilized not only for the targeted treatment of tissues, but also for stem cell expansion, differentiation and biomaterial interaction in tissue engineering applications. In this review, we reported recent advances in the application of low-intensity vibrations on stem and progenitor cell populations. Modulation of cellular behavior with low-intensity vibrations as an alternative or complementary factor to biochemical and scaffold induced signals may represent an increase of capabilities in studies related to tissue engineering.
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Affiliation(s)
- Oznur Baskan
- Department of Bioengineering, Izmir Institute of Technology, Urla, Izmir, Turkey
| | - Ozge Karadas
- Department of Bioengineering, Izmir Institute of Technology, Urla, Izmir, Turkey
| | - Gulistan Mese
- Department of Molecular Biology and Genetics, Izmir Institute of Technology, Urla, Izmir, Turkey
| | - Engin Ozcivici
- Department of Bioengineering, Izmir Institute of Technology, Urla, Izmir, Turkey
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24
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Zhu C, Gao L, Han Y, OuYang Q, Zong L, Li L, Zhang C, Liu J, Yu HD, Huang W. Using magnetic levitation for density-based detection of cooking oils. RSC Adv 2019; 9:18285-18291. [PMID: 35515237 PMCID: PMC9064766 DOI: 10.1039/c9ra02516b] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2019] [Accepted: 06/04/2019] [Indexed: 11/25/2022] Open
Abstract
Adulterated cooking oils and the repeated use of frying cooking oils are harmful to human health. Current techniques for the quality control of cooking oils such as gas chromatography and high performance liquid chromatography usually require expensive facilities, and they are complicated to operate. This paper describes a simple technique that uses magnetic levitation (MagLev) to analyse cooking oils based on density. We have demonstrated the application of MagLev to detect the quality of cooking oil by simulating adulterated sesame oil using peanut oil and frying soybean oil for different times. We have also demonstrated the use of MagLev to differentiate secondhand cooking oil from certified cooking oil. MagLev provides a portable and inexpensive method for the on-site inspection of cooking oils, and it may be extended to many other applications in food safety, environmental monitoring, medical diagnosis, and so on. The advantages of high sensitivity, low cost, and convenience of operation make MagLev especially useful for in situ applications in resource-limited settings. We have developed a portable and inexpensive method that uses magnetic levitation (MagLev) for on-site quality inspection of cooking oils.![]()
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