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Shin HG, Li X, Heo HY, Knutsson L, Szczepankiewicz F, Nilsson M, van Zijl PCM. Compartmental anisotropy of filtered exchange imaging (FEXI) in human white matter: What is happening in FEXI? Magn Reson Med 2024; 92:660-675. [PMID: 38525601 PMCID: PMC11142880 DOI: 10.1002/mrm.30086] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/04/2023] [Revised: 01/30/2024] [Accepted: 02/28/2024] [Indexed: 03/26/2024]
Abstract
PURPOSE To investigate the effects of compartmental anisotropy on filtered exchange imaging (FEXI) in white matter (WM). THEORY AND METHODS FEXI signals were measured using multiple combinations of diffusion filter and detection directions in five healthy volunteers. Additional filters, including a trace-weighted diffusion filter with trapezoidal gradients, a spherical b-tensor encoded diffusion filter, and a T2 filter, were tested with trace-weighted diffusion detection. RESULTS A large range of apparent exchange rates (AXR) and both positive and negative filter efficiencies (σ) were found depending on the mutual orientation of the filter and detection gradients relative to WM fiber orientation. The data demonstrated that the fast-diffusion compartment suppressed by diffusional filtering is not exclusively extra-cellular, but also intra-cellular. While not comprehensive, a simple two-compartment diffusion tensor model with water exchange was able to account qualitatively for the trends in positive and negative filtering efficiencies, while standard model imaging (SMI) without exchange could not. This two-compartment diffusion tensor model also demonstrated smaller AXR variances across subjects. When employing trace-weighted diffusion detection, AXR values were on the order of the R1 (=1/T1) of water at 3T for crossing fibers, while being less than R1 for parallel fibers. CONCLUSION Orientation-dependent AXR and σ values were observed when using multi-orientation filter and detection gradients in FEXI, indicating that WM FEXI models need to account for compartmental anisotropy. When using trace-weighted detection, AXR values were on the order of or less than R1, complicating the interpretation of FEXI results in WM in terms of biological exchange properties. These findings may contribute toward better understanding of FEXI results in WM.
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Affiliation(s)
- Hyeong-Geol Shin
- F.M. Kirby Research Center for Functional Brain Imaging, Kennedy Krieger Institute, Baltimore, Maryland, USA
- Russell H. Morgan Department of Radiology and Radiological Science, The Johns Hopkins University School of Medicine, Baltimore, Maryland, USA
| | - Xu Li
- F.M. Kirby Research Center for Functional Brain Imaging, Kennedy Krieger Institute, Baltimore, Maryland, USA
- Russell H. Morgan Department of Radiology and Radiological Science, The Johns Hopkins University School of Medicine, Baltimore, Maryland, USA
| | - Hye-Young Heo
- F.M. Kirby Research Center for Functional Brain Imaging, Kennedy Krieger Institute, Baltimore, Maryland, USA
- Russell H. Morgan Department of Radiology and Radiological Science, The Johns Hopkins University School of Medicine, Baltimore, Maryland, USA
| | - Linda Knutsson
- F.M. Kirby Research Center for Functional Brain Imaging, Kennedy Krieger Institute, Baltimore, Maryland, USA
- Russell H. Morgan Department of Radiology and Radiological Science, The Johns Hopkins University School of Medicine, Baltimore, Maryland, USA
- Department of Medical Radiation Physics, Clinical Sciences Lund, Lund University, Lund, Sweden
| | - Filip Szczepankiewicz
- Department of Medical Radiation Physics, Clinical Sciences Lund, Lund University, Lund, Sweden
| | - Markus Nilsson
- Department of Radiology, Clinical Sciences Lund, Lund University, Lund, Sweden
- Department of Medical Imaging and Physiology, Skåne University Hospital, Lund, Sweden
| | - Peter C M van Zijl
- F.M. Kirby Research Center for Functional Brain Imaging, Kennedy Krieger Institute, Baltimore, Maryland, USA
- Russell H. Morgan Department of Radiology and Radiological Science, The Johns Hopkins University School of Medicine, Baltimore, Maryland, USA
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2
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Rotzinger M, Schuster N, Zangger K. Identifying Exchangeable Protons in a 1D NMR Spectrum by Spatially Selective Exchange-Editing. Chemphyschem 2024; 25:e202300713. [PMID: 38407996 DOI: 10.1002/cphc.202300713] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2023] [Revised: 02/18/2024] [Accepted: 02/19/2024] [Indexed: 02/28/2024]
Abstract
Signals undergoing chemical or conformational exchange in one-dimensional NMR spectra are often identified by deuterium exchange. In order to obtain quantitative information about the dynamic processes involved, one frequently used method is EXchange SpectroscopY (EXSY). To detect all exchange processes, the EXSY experiment requires the acquisition of time-consuming two-dimensional spectra. Here we report a faster alternative, an experiment which uses spatial encoding to extract similar information in a 1D exchange-edited experiment. Thereby, all protons are observed at once, but in different slices of the detection volume. The experiment can be carried out in a single scan to identify exchanging sites in a 1D spectrum by changes in signal intensity indicating exchange processes. If the exchanging partner, for example water is in molar excess the exchange-editing method easily identifies mobile protons by negative signals in the 1D 1H NMR spectrum.
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Affiliation(s)
- Markus Rotzinger
- University of Graz, Institute of Chemistry, Heinrichstraße 28, 8010, Graz, Austria
| | - Nathalie Schuster
- University of Graz, Institute of Chemistry, Heinrichstraße 28, 8010, Graz, Austria
| | - Klaus Zangger
- University of Graz, Institute of Chemistry, Heinrichstraße 28, 8010, Graz, Austria
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3
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Khateri M, Reisert M, Sierra A, Tohka J, Kiselev VG. What does FEXI measure? NMR IN BIOMEDICINE 2022; 35:e4804. [PMID: 35892279 DOI: 10.1002/nbm.4804] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/31/2022] [Revised: 06/22/2022] [Accepted: 07/23/2022] [Indexed: 06/15/2023]
Abstract
Filter-exchange imaging (FEXI) has already been utilized in several biomedical studies for evaluating the permeability of cell membranes. The method relies on suppressing the extracellular signal using strong diffusion weighting (the mobility filter causing a reduction in the overall diffusivity) and monitoring the subsequent diffusivity recovery. Using Monte Carlo simulations, we demonstrate that FEXI is sensitive not uniquely to the transcytolemmal exchange but also to the geometry of involved compartments: complex geometry offers locations where spins remain unaffected by the mobility filter; moving to other locations afterwards, such spins contribute to the diffusivity recovery without actually permeating any membrane. This exchange mechanism is a warning for those who aim to use FEXI in complex media such as brain gray matter and opens wide scope for investigation towards crystallizing the genuine membrane permeation and characterizing the compartment geometry.
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Affiliation(s)
- Mohammad Khateri
- A.I. Virtanen Institute for Molecular Sciences, University of Eastern Finland, Kuopio, Finland
| | - Marco Reisert
- Medical Physics, Department of Radiology, University Medical Center Freiburg, Faculty of Medicine, University of Freiburg, Freiburg, Germany
- Department of Stereotactic and Functional Neurosurgery, University Medical Center Freiburg, Faculty of Medicine, University of Freiburg, Freiburg, Germany
| | - Alejandra Sierra
- A.I. Virtanen Institute for Molecular Sciences, University of Eastern Finland, Kuopio, Finland
| | - Jussi Tohka
- A.I. Virtanen Institute for Molecular Sciences, University of Eastern Finland, Kuopio, Finland
| | - Valerij G Kiselev
- Medical Physics, Department of Radiology, University Medical Center Freiburg, Faculty of Medicine, University of Freiburg, Freiburg, Germany
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4
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Ullah MS, Mankinen O, Zhivonitko VV, Telkki VV. Ultrafast transverse relaxation exchange NMR spectroscopy. Phys Chem Chem Phys 2022; 24:22109-22114. [PMID: 36074123 PMCID: PMC9491048 DOI: 10.1039/d2cp02944h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Molecular exchange between different physical or chemical environments occurs due to either diffusion or chemical transformation. Nuclear magnetic resonance (NMR) spectroscopy provides a means of understanding the molecular exchange in a noninvasive way and without tracers. Here, we introduce a novel two dimensional, single-scan ultrafast Laplace NMR (UF LNMR) method to monitor molecular exchange using transverse relaxation as a contrast. The UF T2–T2 relaxation exchange spectroscopy (REXSY) method shortens the experiment time by one to two orders of magnitude compared to its conventional counterpart. Contrary to the conventional EXSY, the exchanging sites are distinguished based on T2 relaxation times instead of chemical shifts, making the method especially useful for systems including physical exchange of molecules. Therefore, the UF REXSY method offers an efficient means for quantification of exchange processes in various fields such as cellular metabolism and ion transport in electrolytes. As a proof of principle, we studied a halogen-free orthoborate based ionic liquid system and followed molecular exchange between molecular aggregates and free molecules. The results are in good agreement with the conventional exchange studies. Due to the single-scan nature, the method potentially significantly facilitates the use of modern hyperpolarization techniques to boost the sensitivity by several orders of magnitude. An ultrafast two-dimensional NMR method allows quantification of molecular exchange rates efficiently based on T2 relaxation contrast.![]()
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Affiliation(s)
- Md Sharif Ullah
- NMR Research Unit, Faculty of Science, University of Oulu, P.O.Box 3000, 90014 Oulu, Finland.
| | - Otto Mankinen
- NMR Research Unit, Faculty of Science, University of Oulu, P.O.Box 3000, 90014 Oulu, Finland.
| | - Vladimir V Zhivonitko
- NMR Research Unit, Faculty of Science, University of Oulu, P.O.Box 3000, 90014 Oulu, Finland.
| | - Ville-Veikko Telkki
- NMR Research Unit, Faculty of Science, University of Oulu, P.O.Box 3000, 90014 Oulu, Finland.
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5
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Kharbanda Y, Urbańczyk M, Zhivonitko VV, Mailhiot S, Kettunen MI, Telkki VV. Sensitive, Efficient and Portable Analysis of Molecular Exchange Processes by Hyperpolarized Ultrafast NMR. Angew Chem Int Ed Engl 2022; 61:e202203957. [PMID: 35499690 PMCID: PMC9400989 DOI: 10.1002/anie.202203957] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2022] [Indexed: 11/08/2022]
Abstract
Molecular exchange processes are ubiquitous in nature. Here, we introduce a method to analyze exchange processes by using low-cost, portable, single-sided NMR instruments. The inherent magnetic field inhomogeneity of the single-sided instruments is exploited to achieve diffusion contrast of exchange sites and spatial encoding of 2D data. This so-called ultrafast diffusion exchange spectroscopy method shortens the experiment time by two to four orders of magnitude. Furthermore, because full 2D data are measured in a single scan (in a fraction of a second), the sensitivity of the experiment can be improved by several orders of magnitude using so-called nuclear spin hyperpolarization methods (in this case, dissolution dynamic nuclear polarization). As the first demonstration of the feasibility of the method in various applications, we show that the method enables quantification of intra- and extracellular exchange of water in a yeast cell suspension.
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Affiliation(s)
| | - Mateusz Urbańczyk
- Institute of Physical Chemistry, Polish Academy of Sciences, Warsaw, Poland
| | | | - Sarah Mailhiot
- NMR Research Unit, University of Oulu, Oulu, 90540, Finland
| | - Mikko I Kettunen
- Kuopio Biomedical Imaging Unit, A.I. Virtanen Institute for Molecular Sciences, University of Eastern Finland, Kuopio, Finland
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6
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Kharbanda Y, Urbańczyk M, Zhivonitko VV, Mailhiot S, Kettunen MI, Telkki V. Sensitive, Efficient and Portable Analysis of Molecular Exchange Processes by Hyperpolarized Ultrafast NMR. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202203957] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
| | - Mateusz Urbańczyk
- Institute of Physical Chemistry Polish Academy of Sciences Warsaw Poland
| | | | | | - Mikko I. Kettunen
- Kuopio Biomedical Imaging Unit A.I. Virtanen Institute for Molecular Sciences University of Eastern Finland Kuopio Finland
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Cai TX, Williamson NH, Ravin R, Basser PJ. Disentangling the effects of restriction and exchange with diffusion exchange spectroscopy. FRONTIERS IN PHYSICS 2022; 10:805793. [PMID: 37063496 PMCID: PMC10104504 DOI: 10.3389/fphy.2022.805793] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/17/2023]
Abstract
Diffusion exchange spectroscopy (DEXSY) is a multidimensional NMR technique that can reveal how water molecules exchange between compartments within heterogeneous media, such as biological tissue. Data from DEXSY experiments is typically processed using numerical inverse Laplace transforms (ILTs) to produce a diffusion-diffusion spectrum. A tacit assumption of this ILT approach is that the signal behavior is Gaussian - i.e., the spin echo intensity decays exponentially with the degree of diffusion weighting. The assumptions that underlie Gaussian signal behavior may be violated, however, depending on the gradient strength applied and the sample under study. We argue that non-Gaussian signal behavior due to restrictions is to be expected in the study of biological tissue using diffusion NMR. Further, we argue that this signal behavior can produce confounding features in the diffusion-diffusion spectra obtained from numerical ILTs of DEXSY data - entangling the effects of restriction and exchange. Specifically, restricted signal behavior can result in broadening of peaks and in the appearance of illusory exchanging compartments with distributed diffusivities, which pearl into multiple peaks if not highly regularized. We demonstrate these effects on simulated data. That said, we suggest the use of features in the signal acquisition domain that can be used to rapidly probe exchange without employing an ILT. We also propose a means to characterize the non-Gaussian signal behavior due to restrictions within a sample using DEXSY measurements with a near zero mixing time or storage interval. We propose a combined acquisition scheme to independently characterize restriction and exchange with various DEXSY measurements, which we term Restriction and Exchange from Equally-weighted Double and Single Diffusion Encodings (REEDS-DE). We test this method on ex vivo neonatal mouse spinal cord - a sample consisting primarily of gray matter - using a low-field, static gradient NMR system. In sum, we highlight critical shortcomings of prevailing DEXSY analysis methods that conflate the effects of restriction and exchange, and suggest a viable experimental approach to disentangle them.
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Affiliation(s)
- Teddy X. Cai
- Section on Quantitative Imaging and Tissue Sciences, Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, Maryland, USA
- Wellcome Centre for Integrative Neuroimaging, FMRIB, Nuffield Department of Clinical Neurosciences, University of Oxford, Oxford, UK
| | - Nathan H. Williamson
- Section on Quantitative Imaging and Tissue Sciences, Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, Maryland, USA
- National Institute of General Medical Sciences, National Institutes of Health, Bethesda, Maryland, USA
| | - Rea Ravin
- Section on Quantitative Imaging and Tissue Sciences, Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, Maryland, USA
- Celoptics, Rockville, Maryland, USA
| | - Peter J. Basser
- Section on Quantitative Imaging and Tissue Sciences, Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, Maryland, USA
- Correspondence: Peter J. Basser, Section on Quantitative Imaging and Tissue Sciences, Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Building 13, Room 3W16, 13 South Drive, Bethesda, Maryland 20892-5772, USA,
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8
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Li Z, Pang Z, Cheng J, Hsu YC, Sun Y, Özarslan E, Bai R. The direction-dependence of apparent water exchange rate in human white matter. Neuroimage 2021; 247:118831. [PMID: 34923129 DOI: 10.1016/j.neuroimage.2021.118831] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/22/2021] [Revised: 12/10/2021] [Accepted: 12/15/2021] [Indexed: 11/29/2022] Open
Abstract
Transmembrane water exchange is a potential biomarker in the diagnosis and understanding of cancers, brain disorders, and other diseases. Filter-exchange imaging (FEXI), a special case of diffusion exchange spectroscopy adapted for clinical applications, has the potential to reveal different physiological water exchange processes. However, it is still controversial whether modulating the diffusion encoding gradient direction can affect the apparent exchange rate (AXR) measurements of FEXI in white matter (WM) where water diffusion shows strong anisotropy. In this study, we explored the diffusion-encoding direction dependence of FEXI in human brain white matter by performing FEXI with 20 diffusion-encoding directions on a clinical 3T scanner in-vivo. The results show that the AXR values measured when the gradients are perpendicular to the fiber orientation (0.77 ± 0.13 s - 1, mean ± standard deviation of all the subjects) are significantly larger than the AXR estimates when the gradients are parallel to the fiber orientation (0.33 ± 0.14 s - 1, p < 0.001) in WM voxels with coherently-orientated fibers. In addition, no significant correlation is found between AXRs measured along these two directions, indicating that they are measuring different water exchange processes. What's more, only the perpendicular AXR rather than the parallel AXR shows dependence on axonal diameter, indicating that the perpendicular AXR might reflect transmembrane water exchange between intra-axonal and extra-cellular spaces. Further finite difference (FD) simulations having three water compartments (intra-axonal, intra-glial, and extra-cellular spaces) to mimic WM micro-environments also suggest that the perpendicular AXR is more sensitive to the axonal water transmembrane exchange than parallel AXR. Taken together, our results show that AXR measured along different directions could be utilized to probe different water exchange processes in WM.
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Affiliation(s)
- Zhaoqing Li
- Department of Physical Medicine and Rehabilitation of the Affiliated Sir Run Shaw Hospital AND Interdisciplinary Institute of Neuroscience and Technology, School of Medicine, Zhejiang University, Hangzhou, China; Key Laboratory of Biomedical Engineering of Education Ministry, College of Biomedical Engineering and Instrument Science, Zhejiang University, Hangzhou, China
| | - Zhenfeng Pang
- Department of Chemistry, Zhejiang University, Hangzhou, China
| | - Juange Cheng
- Department of Physical Medicine and Rehabilitation of the Affiliated Sir Run Shaw Hospital AND Interdisciplinary Institute of Neuroscience and Technology, School of Medicine, Zhejiang University, Hangzhou, China
| | - Yi-Cheng Hsu
- MR Collaboration, Siemens Healthcare, Shanghai, China
| | - Yi Sun
- MR Collaboration, Siemens Healthcare, Shanghai, China
| | - Evren Özarslan
- Department of Biomedical Engineering, Linköping University, Linköping, Sweden; Center for Medical Image Science and Visualization, Linköping University, Linköping, Sweden
| | - Ruiliang Bai
- Department of Physical Medicine and Rehabilitation of the Affiliated Sir Run Shaw Hospital AND Interdisciplinary Institute of Neuroscience and Technology, School of Medicine, Zhejiang University, Hangzhou, China; Key Laboratory of Biomedical Engineering of Education Ministry, College of Biomedical Engineering and Instrument Science, Zhejiang University, Hangzhou, China.
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9
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Telkki VV, Urbańczyk M, Zhivonitko V. Ultrafast methods for relaxation and diffusion. PROGRESS IN NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY 2021; 126-127:101-120. [PMID: 34852922 DOI: 10.1016/j.pnmrs.2021.07.001] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/09/2021] [Revised: 07/07/2021] [Accepted: 07/08/2021] [Indexed: 06/13/2023]
Abstract
Relaxation and diffusion NMR measurements offer an approach to studying rotational and translational motion of molecules non-invasively, and they also provide chemical resolution complementary to NMR spectra. Multidimensional experiments enable the correlation of relaxation and diffusion parameters as well as the observation of molecular exchange phenomena through relaxation or diffusion contrast. This review describes how to accelerate multidimensional relaxation and diffusion measurements significantly through spatial encoding. This so-called ultrafast Laplace NMR approach shortens the experiment time to a fraction and makes even single-scan experiments possible. Single-scan experiments, in turn, significantly facilitate the use of nuclear spin hyperpolarization methods to boost sensitivity. The ultrafast Laplace NMR method is also applicable with low-field, mobile NMR instruments, and it can be exploited in many disciplines. For example, it has been used in studies of the dynamics of fluids in porous materials, identification of intra- and extracellular metabolites in cancer cells, and elucidation of aggregation phenomena in atmospheric surfactant solutions.
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Affiliation(s)
| | - Mateusz Urbańczyk
- NMR Research Unit, University of Oulu, P.O. Box 3000, FIN-90014, Finland; Centre of New Technologies, University of Warsaw, Banacha 2c, 02-097 Warsaw, Poland
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10
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Hwang S, Kärger J, Miersemann E. Diffusion and reaction in pore hierarchies by the two-region model. ADSORPTION 2021. [DOI: 10.1007/s10450-021-00307-x] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
AbstractThe two-region (“Kärger”) model of diffusion in complex pore spaces is exploited for quantitating mass transfer in hierarchically organized nanoporous materials, consisting of a continuous microporous bulk phase permeated by a network of transport pores. With the implications that the diffusivity in the transport pores significantly exceeds the diffusivity in the micropores and that the relative population of the transport pores is far below that of the micropores, overall transport depends on only three independent parameters. Depending on their interrelation, enhancement of the overall mass transfer is found to be ensured by two fundamentally different mechanisms. They are referred to as the limiting cases of fast and slow exchange, with the respective time constants of molecular uptake being controlled by different parameters. Complemented with reaction terms, the two-region model may equally successfully be applied to the quantitation of the combined effect of diffusion and reaction in terms of the effectiveness factor. Generalization of the classical Thiele concept is shown to provide an excellent estimate of the effectiveness factor of a chemical reaction in hierarchically porous materials, solely based on the intrinsic reaction rate and the time constant of molecular uptake relevant to the given conditions.
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11
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Abstract
AbstractLabeling in diffusion measurements by pulsed field gradient (PFG) NMR is based on the observation of the phase of nuclear spins acquired in a constant magnetic field with purposefully superimposed field gradients. This labeling does in no way affect microdynamics and provides information about the probability distribution of molecular displacements as a function of time. An introduction of the measuring principle is followed by a detailed description of the ranges of measurements and their limitation. Particular emphasis is given to an explanation of possible pitfalls in the measurements and the ways to circumvent them. Showcases presented for illustrating the wealth of information provided by PFG NMR include a survey on the various patterns of concentration dependence of intra-particle diffusion and examples of transport inhibition by additional transport resistances within the nanoporous particles and on their external surface. The latter information is attained by combination with the outcome of tracer exchange experiments, which are shown to become possible via a special formalism of PFG NMR data analysis. Further evidence provided by PFG NMR concerns diffusion enhancement in pore hierarchies, diffusion anisotropy and the impact of diffusion on chemical conversion in porous catalysts. A compilation of the specifics of PFG NMR and of the parallels with other measurement techniques concludes the paper.
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12
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Williamson NH, Ravin R, Cai TX, Benjamini D, Falgairolle M, O'Donovan MJ, Basser PJ. Real-time measurement of diffusion exchange rate in biological tissue. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2020; 317:106782. [PMID: 32679514 PMCID: PMC7427561 DOI: 10.1016/j.jmr.2020.106782] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/06/2020] [Revised: 06/22/2020] [Accepted: 06/26/2020] [Indexed: 05/05/2023]
Abstract
Diffusion exchange spectroscopy (DEXSY) provides a means to isolate the signal attenuation associated with exchange from other sources of signal loss. With the total diffusion weighting b1+b2=bs held constant, DEXSY signals acquired with b1=0 or b2=0 have no exchange weighting, while a DEXSY signal acquired with b1=b2 has maximal exchange weighting. The exchange rate can be estimated by fitting a diffusion exchange model to signals acquired with variable mixing times. Conventionally, acquired signals are normalized by a signal with b1=0 and b2=0 to remove the decay due to spin-lattice relaxation. Instead, division by a signal with equal bs but b1=0 or b2=0 reduces spin-lattice relaxation weighting of the apparent exchange rate (AXR). Furthermore, apparent diffusion-weighted R1 relaxation rates can be estimated from non-exchange-weighted DEXSY signals. Estimated R1 values are utilized to remove signal decay due to spin-lattice relaxation from exchange-weighted signals, permitting a more precise estimate of AXR with less data. Data reduction methods are proposed and tested with regards to statistical accuracy and precision of AXR estimates on simulated and experimental data. Simulations show that the methods are capable of accurately measuring the ground-truth exchange rate. The methods remain accurate even when the assumption that DEXSY signals attenuate with b is violated, as occurs for restricted diffusion. Experimental data was collected from fixed neonatal mouse spinal cord samples at 25 and 7°C using the strong static magnetic field gradient produced by a single-sided permanent magnet (i.e., an NMR MOUSE). The most rapid method for exchange measurements requires only five data points (an 80 s experiment as implemented) and achieves a similar level of accuracy and precision to the baseline method using 44 data points. This represents a significant improvement in acquisition speed, overcoming a barrier which has limited the use of DEXSY on living specimen.
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Affiliation(s)
- Nathan H Williamson
- National Institute of General Medical Sciences, National Institutes of Health, Bethesda, MD, USA; Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, MD, USA.
| | - Rea Ravin
- Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, MD, USA; Celoptics, Rockville, MD, USA
| | - Teddy X Cai
- Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, MD, USA
| | - Dan Benjamini
- Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, MD, USA; The Center for Neuroscience and Regenerative Medicine, Uniformed Service University of the Health Sciences, Bethesda, MD 20814, USA
| | - Melanie Falgairolle
- National Institute of Neurological Disorders and Stroke, National Institutes of Health, Bethesda, MD, USA
| | - Michael J O'Donovan
- National Institute of Neurological Disorders and Stroke, National Institutes of Health, Bethesda, MD, USA
| | - Peter J Basser
- Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, MD, USA.
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13
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Abstract
The exchange of molecules between different physical or chemical environments due to diffusion or chemical transformations has a crucial role in a plethora of fundamental processes such as breathing, protein folding, chemical reactions and catalysis. Here, we introduce a method for a single-scan, ultrafast NMR analysis of molecular exchange based on the diffusion coefficient contrast. The method shortens the experiment time by one to four orders of magnitude. Consequently, it opens the way for high sensitivity quantification of important transient physical and chemical exchange processes such as in cellular metabolism. As a proof of principle, we demonstrate that the method reveals the structure of aggregates formed by surfactants relevant to aerosol research. Analysis of exchange processes is time consuming by two-dimensional exchange NMR spectroscopy. Here the authors demonstrate a single-scan ultrafast Laplace NMR approach based on spatial encoding to measure molecular diffusion, with an increase by a factor six in the sensitivity per unit time.
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14
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Williamson NH, Ravin R, Benjamini D, Merkle H, Falgairolle M, O'Donovan MJ, Blivis D, Ide D, Cai TX, Ghorashi NS, Bai R, Basser PJ. Magnetic resonance measurements of cellular and sub-cellular membrane structures in live and fixed neural tissue. eLife 2019; 8:51101. [PMID: 31829935 PMCID: PMC6977971 DOI: 10.7554/elife.51101] [Citation(s) in RCA: 35] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/15/2019] [Accepted: 12/11/2019] [Indexed: 12/21/2022] Open
Abstract
We develop magnetic resonance (MR) methods for real-time measurement of tissue microstructure and membrane permeability of live and fixed excised neonatal mouse spinal cords. Diffusion and exchange MR measurements are performed using the strong static gradient produced by a single-sided permanent magnet. Using tissue delipidation methods, we show that water diffusion is restricted solely by lipid membranes. Most of the diffusion signal can be assigned to water in tissue which is far from membranes. The remaining 25% can be assigned to water restricted on length scales of roughly a micron or less, near or within membrane structures at the cellular, organelle, and vesicle levels. Diffusion exchange spectroscopy measures water exchanging between membrane structures and free environments at 100 s-1.
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Affiliation(s)
- Nathan H Williamson
- Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, United States
| | - Rea Ravin
- Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, United States.,Celoptics, Rockville, United States
| | - Dan Benjamini
- Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, United States.,Center for Neuroscience and Regenerative Medicine, Henry Jackson Foundation, Bethesda, United States
| | - Hellmut Merkle
- National Institute of Neurological Disorders and Stroke, National Institutes of Health, Bethesda, United States
| | - Melanie Falgairolle
- National Institute of Neurological Disorders and Stroke, National Institutes of Health, Bethesda, United States
| | - Michael James O'Donovan
- National Institute of Neurological Disorders and Stroke, National Institutes of Health, Bethesda, United States
| | - Dvir Blivis
- National Institute of Neurological Disorders and Stroke, National Institutes of Health, Bethesda, United States
| | - Dave Ide
- National Institute of Neurological Disorders and Stroke, National Institutes of Health, Bethesda, United States.,National Institute of Mental Health, National Institutes of Health, Bethesda, United States
| | - Teddy X Cai
- Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, United States
| | - Nima S Ghorashi
- Cardiovascular Branch, National Heart, Lung, and Blood Institute, National Institutes of Health, Bethesda, United States
| | - Ruiliang Bai
- Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, United States.,Interdisciplinary Institute of Neuroscience and Technology, School of Medicine, Zhejiang University, Hangzhou, China
| | - Peter J Basser
- Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, United States
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15
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Rybkin I, Gorin D, Sukhorukov G, Lapanje A. Thickness of Polyelectrolyte Layers of Separately Confined Bacteria Alters Key Physiological Parameters on a Single Cell Level. Front Bioeng Biotechnol 2019; 7:378. [PMID: 31867314 PMCID: PMC6904277 DOI: 10.3389/fbioe.2019.00378] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/02/2019] [Accepted: 11/14/2019] [Indexed: 12/18/2022] Open
Abstract
Confinement of bacterial cells in a matrix or in capsules is an integral part of many biotechnological applications. Here, the well-known layer-by-layer method of deposition of a polyelectrolyte film a few nanometers in thickness to confine separated bacterial cells in permeable and physically durable shells has been examined. Due to the physical properties of such a confinement, we found that this method enables investigation of effects of physical barriers against mass gain and cell division. Using the method of time-lapse confocal microscopy, we observed a prolonged lag phase, dependent on the number of polyelectrolyte layers. In the confinement, both the GFP fluorescent signal from the leaking T7 promoter and the cell size were increased by factors of more than five and two, respectively. This creates a paradigm shift that enables use of mechanical entrapment for control of bacterial cell physiology and opens possibilities of controlling the division rate as well as gene expression. These effects can be attributed to the perturbation of the sensing of the cell size, which results in disproportional synthesis of a cell envelope impinging the intracellular material and compels cells to grow rapidly. In addition, the charged surface of cells enables prolonged intercellular physical interaction and results in spherically shaped microcolonies.
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Affiliation(s)
- Iaroslav Rybkin
- Department of Environmental Sciences, Jožef Stefan Institute, Ljubljana, Slovenia.,Remote Controlled Theranostic Systems Lab, Institute of Nanostructures and Biosystems, Saratov State University, Saratov, Russia.,Jožef Stefan International Postgraduate School, Ljubljana, Slovenia.,Department of Reactive Transport, Helmholtz Zentrum Dresden Rossendorf, Institute of Resource Ecology, Leipzig, Germany
| | - Dmitry Gorin
- Remote Controlled Theranostic Systems Lab, Institute of Nanostructures and Biosystems, Saratov State University, Saratov, Russia.,Center for Photonics and Quantum Materials, Skolkovo Institute of Science and Technology, Moscow, Russia
| | - Gleb Sukhorukov
- Remote Controlled Theranostic Systems Lab, Institute of Nanostructures and Biosystems, Saratov State University, Saratov, Russia.,School of Engineering and Materials Science, Queen Mary University of London, London, United Kingdom
| | - Aleš Lapanje
- Department of Environmental Sciences, Jožef Stefan Institute, Ljubljana, Slovenia
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16
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Static Solid Relaxation Ordered Spectroscopy: SS-ROSY. Int J Mol Sci 2019; 20:ijms20235888. [PMID: 31771243 PMCID: PMC6928731 DOI: 10.3390/ijms20235888] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/19/2019] [Revised: 11/19/2019] [Accepted: 11/21/2019] [Indexed: 11/20/2022] Open
Abstract
A two-dimensional pulse sequence is introduced for correlating nuclear magnetic resonance anisotropic chemical shifts to a relaxation time (e.g., T1) in solids under static conditions. The sequence begins with a preparatory stage for measuring relaxation times, and is followed by a multiple pulse sequence for homonuclear dipolar decoupling. Data analysis involves the use of Fourier transform, followed by a one-dimensional inverse Laplace transform for each frequency index. Experimental results acquired on solid samples demonstrate the general approach, and additional variations involving heteronuclear decoupling and magic angle spinning are discussed.
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17
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Hwang S, Kärger J. NMR diffusometry with guest molecules in nanoporous materials. Magn Reson Imaging 2019; 56:3-13. [DOI: 10.1016/j.mri.2018.08.010] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2018] [Revised: 08/20/2018] [Accepted: 08/23/2018] [Indexed: 01/22/2023]
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18
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Svyatova AI, Kovtunov KV, Koptyug IV. Magnetic resonance imaging of catalytically relevant processes. REV CHEM ENG 2019. [DOI: 10.1515/revce-2018-0035] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
Abstract
The main aim of this article is to provide a state-of-the-art review of the magnetic resonance imaging (MRI) utilization in heterogeneous catalysis. MRI is capable to provide very useful information about both living and nonliving objects in a noninvasive way. The studies of an internal heterogeneous reactor structure by MRI help to understand the mass transport and chemical processes inside the working catalytic reactor that can significantly improve its efficiency. However, one of the serious disadvantages of MRI is low sensitivity, and this obstacle dramatically limits possible MRI application. Fortunately, there are hyperpolarization methods that eliminate this problem. Parahydrogen-induced polarization approach, for instance, can increase the nuclear magnetic resonance signal intensity by four to five orders of magnitude; moreover, the obtained polarization can be stored in long-lived spin states and then transferred into an observable signal in MRI. An in-depth account of the studies on both thermal and hyperpolarized MRI for the investigation of heterogeneous catalytic processes is provided in this review as part of the special issue emphasizing the research performed to date in Russia/USSR.
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Affiliation(s)
- Alexandra I. Svyatova
- Laboratory of Magnetic Resonance Microimaging, International Tomography Center, Siberian Branch of the Russian Academy of Sciences (SB RAS) , Institutskaya St. 3A , Novosibirsk 630090 , Russia
- Novosibirsk State University , Pirogova St. 1 , Novosibirsk 630090 , Russia
| | - Kirill V. Kovtunov
- Laboratory of Magnetic Resonance Microimaging, International Tomography Center, Siberian Branch of the Russian Academy of Sciences (SB RAS) , Institutskaya St. 3A , Novosibirsk 630090 , Russia
- Novosibirsk State University , Pirogova St. 1 , Novosibirsk 630090 , Russia
| | - Igor V. Koptyug
- Laboratory of Magnetic Resonance Microimaging, International Tomography Center, Siberian Branch of the Russian Academy of Sciences (SB RAS) , Institutskaya St. 3A , Novosibirsk 630090 , Russia
- Novosibirsk State University , Pirogova St. 1 , Novosibirsk 630090 , Russia
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19
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Cai TX, Benjamini D, Komlosh ME, Basser PJ, Williamson NH. Rapid detection of the presence of diffusion exchange. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2018; 297:17-22. [PMID: 30340203 PMCID: PMC6289744 DOI: 10.1016/j.jmr.2018.10.004] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/20/2018] [Revised: 10/07/2018] [Accepted: 10/08/2018] [Indexed: 05/08/2023]
Abstract
Diffusion exchange spectroscopy (DEXSY) provides a detailed picture of how fluids in different microenvironments communicate with one another but requires a large amount of data. For DEXSY MRI, a simple measure of apparent exchanging fractions may suffice to characterize and differentiate materials and tissues. Reparameterizing signal intensity from a PGSE-storage-PGSE experiment as a function of the sum, bs=b1+b2, and difference bd=b2-b1 of the diffusion encodings separates diffusion weighting from exchange weighting. Exchange leads to upward curvature along a slice of constant bs. Exchanging fractions can be measured rapidly by a finite difference approximation of the curvature using four data points. The method is generalized for non-steady-state and multi-site exchange. We apply the method to image exchanging fractions and calculate exchange rates of water diffusing across the bulk water interface of a glass capillary array.
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Affiliation(s)
- Teddy X Cai
- Department of Chemical Engineering, Carnegie Mellon University, Pittsburgh, PA, USA; National Institute of Biomedical Imaging and Bioengineering (BESIP), National Institutes of Health, Bethesda, MD, USA
| | - Dan Benjamini
- Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, MD, USA
| | - Michal E Komlosh
- Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, MD, USA; The Henry M. Jackson Foundation for the Advancement of Military Medicine, Inc., Bethesda, MD, USA
| | - Peter J Basser
- Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, MD, USA
| | - Nathan H Williamson
- Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, MD, USA.
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20
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Silletta EV, Xu Z, Youssef M, Sacanna S, Jerschow A. Monitoring Molecular Transport across Colloidal Membranes. J Phys Chem B 2018; 122:4931-4936. [PMID: 29665683 DOI: 10.1021/acs.jpcb.8b01638] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The controlled shaping and surface functionalization of colloidal particles has provided opportunities for the development of new materials and responsive particles. The possibility of creating hollow particles with semipermeable walls allows modulating molecular transport properties on colloidal length scales. While shapes and sizes can typically be observed by optical means, the underlying chemical and physical properties are often invisible. Here, we present measurements of cross-membrane transport via pulsed field gradient NMR in packings of hollow colloidal particles. The work is conducted using a systematic selection of particle sizes, wall permeabilities, and osmotic pressures and allows tracking organic molecules as well as ions. It is also shown that, while direct transport of molecules can be measured, indirect markers can be obtained for invisible species via the osmotic pressure as well. The cross-membrane transport information is important for applications in nanoconfinement, nanofiltration, nanodelivery, or nanoreactor devices.
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Affiliation(s)
- Emilia V Silletta
- Department of Chemistry , New York University , 100 Washington Square East , New York , New York 10003 , United States
| | - Zhe Xu
- Department of Chemistry , New York University , 100 Washington Square East , New York , New York 10003 , United States
| | - Mena Youssef
- Department of Chemistry , New York University , 100 Washington Square East , New York , New York 10003 , United States
| | - Stefano Sacanna
- Department of Chemistry , New York University , 100 Washington Square East , New York , New York 10003 , United States
| | - Alexej Jerschow
- Department of Chemistry , New York University , 100 Washington Square East , New York , New York 10003 , United States
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21
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Lauerer A, Kurzhals R, Toufar H, Freude D, Kärger J. Tracing compartment exchange by NMR diffusometry: Water in lithium-exchanged low-silica X zeolites. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2018; 289:1-11. [PMID: 29438825 DOI: 10.1016/j.jmr.2018.01.011] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/08/2017] [Revised: 01/22/2018] [Accepted: 01/23/2018] [Indexed: 06/08/2023]
Abstract
The two-region model for analyzing signal attenuation in pulsed field gradient (PFG) NMR diffusion studies with molecules in compartmented media implies that, on their trajectory, molecules get from one region (one type of compartment) into the other one with a constant (i.e. a time-invariant) probability. This pattern has proved to serve as a good approach for considering guest diffusion in beds of nanoporous host materials, with the two regions ("compartments") identified as the intra- and intercrystalline pore spaces. It is obvious, however, that the requirements of the application of the two-region model are not strictly fulfilled given the correlation between the covered diffusion path lengths in the intracrystalline pore space and the probability of molecular "escape" from the individual crystallites. On considering water diffusion in lithium-exchanged low-silica X zeolite, we are now assuming a different position since this type of material is known to offer "traps" in the trajectories of the water molecules. Now, on attributing the water molecules in the traps and outside of the traps to these two types of regions, we perfectly comply with the requirements of the two-region model. We do, moreover, benefit from the option of high-resolution measurements owing to the combination of magic angle spinning (MAS) with PFG NMR. Data analysis via the two-region model under inclusion of the influence of nuclear magnetic relaxation yields satisfactory agreement between experimental evidence and theoretical estimates. Limitations in accuracy are shown to result from the fact that mass transfer outside of the traps is too complicated for being adequately reflected by simple Fick's laws with but one diffusivity.
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Affiliation(s)
- A Lauerer
- Faculty of Physics and Earth Sciences, Leipzig University, Linnéstraße 5, 04103 Leipzig, Germany; Hof University of Applied Sciences, Alfons-Goppel-Platz 1, 95028 Hof, Germany
| | - R Kurzhals
- Clariant Produkte (Deutschland) GmbH, Chemiepark Bitterfeld-Wolfen, Tricat-Straße, 06803 Bitterfeld-Wolfen, Germany
| | - H Toufar
- Clariant Produkte (Deutschland) GmbH, Chemiepark Bitterfeld-Wolfen, Tricat-Straße, 06803 Bitterfeld-Wolfen, Germany
| | - D Freude
- Faculty of Physics and Earth Sciences, Leipzig University, Linnéstraße 5, 04103 Leipzig, Germany
| | - J Kärger
- Faculty of Physics and Earth Sciences, Leipzig University, Linnéstraße 5, 04103 Leipzig, Germany.
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22
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Reci A, Sederman AJ, Gladden LF. Retaining both discrete and smooth features in 1D and 2D NMR relaxation and diffusion experiments. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2017; 284:39-47. [PMID: 28957684 DOI: 10.1016/j.jmr.2017.08.017] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/12/2017] [Revised: 08/23/2017] [Accepted: 08/24/2017] [Indexed: 06/07/2023]
Abstract
A new method of regularization of 1D and 2D NMR relaxation and diffusion experiments is proposed and a robust algorithm for its implementation is introduced. The new form of regularization, termed the Modified Total Generalized Variation (MTGV) regularization, offers a compromise between distinguishing discrete and smooth features in the reconstructed distributions. The method is compared to the conventional method of Tikhonov regularization and the recently proposed method of L1 regularization, when applied to simulated data of 1D spin-lattice relaxation, T1, 1D spin-spin relaxation, T2, and 2D T1-T2 NMR experiments. A range of simulated distributions composed of two lognormally distributed peaks were studied. The distributions differed with regard to the variance of the peaks, which were designed to investigate a range of distributions containing only discrete, only smooth or both features in the same distribution. Three different signal-to-noise ratios were studied: 2000, 200 and 20. A new metric is proposed to compare the distributions reconstructed from the different regularization methods with the true distributions. The metric is designed to penalise reconstructed distributions which show artefact peaks. Based on this metric, MTGV regularization performs better than Tikhonov and L1 regularization in all cases except when the distribution is known to only comprise of discrete peaks, in which case L1 regularization is slightly more accurate than MTGV regularization.
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Affiliation(s)
- A Reci
- Department of Chemical Engineering and Biotechnology, University of Cambridge, Philippa Fawcett Drive, Cambridge CB3 0AS, United Kingdom
| | - A J Sederman
- Department of Chemical Engineering and Biotechnology, University of Cambridge, Philippa Fawcett Drive, Cambridge CB3 0AS, United Kingdom.
| | - L F Gladden
- Department of Chemical Engineering and Biotechnology, University of Cambridge, Philippa Fawcett Drive, Cambridge CB3 0AS, United Kingdom
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23
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Benjamini D, Komlosh ME, Basser PJ. Imaging Local Diffusive Dynamics Using Diffusion Exchange Spectroscopy MRI. PHYSICAL REVIEW LETTERS 2017; 118:158003. [PMID: 28452522 PMCID: PMC11079612 DOI: 10.1103/physrevlett.118.158003] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/29/2016] [Indexed: 06/07/2023]
Abstract
The movement of water between microenvironments presents a central challenge in the physics of soft matter and porous media. Diffusion exchange spectroscopy (DEXSY) is a powerful 2D nuclear magnetic resonance method for measuring such exchange, yet it is rarely used because of its long scan time requirements. Moreover, it has never been combined with magnetic resonance imaging (MRI). Using probability theory, we vastly reduce the required data, making DEXSY MRI feasible for the first time. Experiments are performed on a composite nerve tissue phantom with restricted and free water-exchanging compartments.
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Affiliation(s)
- Dan Benjamini
- Section on Quantitative Imaging and Tissue Sciences, NICHD, National Institutes of Health, Bethesda, Maryland 20892, USA
| | - Michal E. Komlosh
- Section on Quantitative Imaging and Tissue Sciences, NICHD, National Institutes of Health, Bethesda, Maryland 20892, USA
- Center for Neuroscience and Regenerative Medicine, Henry M. Jackson Foundation for the Advancement of Military Medicine, Bethesda, Maryland 20892, USA
| | - Peter J. Basser
- Section on Quantitative Imaging and Tissue Sciences, NICHD, National Institutes of Health, Bethesda, Maryland 20892, USA
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24
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Peters JP, Vergeldt FJ, Boom RM, van der Goot AJ. Water-binding capacity of protein-rich particles and their pellets. Food Hydrocoll 2017. [DOI: 10.1016/j.foodhyd.2016.11.015] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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25
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26
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Bai R, Benjamini D, Cheng J, Basser PJ. Fast, accurate 2D-MR relaxation exchange spectroscopy (REXSY): Beyond compressed sensing. J Chem Phys 2016; 145:154202. [PMID: 27782473 PMCID: PMC5074998 DOI: 10.1063/1.4964144] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2016] [Accepted: 09/19/2016] [Indexed: 11/14/2022] Open
Abstract
Previously, we showed that compressive or compressed sensing (CS) can be used to reduce significantly the data required to obtain 2D-NMR relaxation and diffusion spectra when they are sparse or well localized. In some cases, an order of magnitude fewer uniformly sampled data were required to reconstruct 2D-MR spectra of comparable quality. Nonetheless, this acceleration may still not be sufficient to make 2D-MR spectroscopy practicable for many important applications, such as studying time-varying exchange processes in swelling gels or drying paints, in living tissue in response to various biological or biochemical challenges, and particularly for in vivo MRI applications. A recently introduced framework, marginal distributions constrained optimization (MADCO), tremendously accelerates such 2D acquisitions by using a priori obtained 1D marginal distribution as powerful constraints when 2D spectra are reconstructed. Here we exploit one important intrinsic property of the 2D-MR relaxation exchange spectra: the fact that the 1D marginal distributions of each 2D-MR relaxation exchange spectrum in both dimensions are equal and can be rapidly estimated from a single Carr-Purcell-Meiboom-Gill (CPMG) or inversion recovery prepared CPMG measurement. We extend the MADCO framework by further proposing to use the 1D marginal distributions to inform the subsequent 2D data-sampling scheme, concentrating measurements where spectral peaks are present and reducing them where they are not. In this way we achieve compression or acceleration that is an order of magnitude greater than that in our previous CS method while providing data in reconstructed 2D-MR spectral maps of comparable quality, demonstrated using several simulated and real 2D T2 - T2 experimental data. This method, which can be called "informed compressed sensing," is extendable to other 2D- and even ND-MR exchange spectroscopy.
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Affiliation(s)
- Ruiliang Bai
- Section on Quantitative Imaging and Tissue Sciences, DIBGI, NICHD, National Institutes of Health, Bethesda, Maryland 20892, USA
| | - Dan Benjamini
- Section on Quantitative Imaging and Tissue Sciences, DIBGI, NICHD, National Institutes of Health, Bethesda, Maryland 20892, USA
| | - Jian Cheng
- Section on Quantitative Imaging and Tissue Sciences, DIBGI, NICHD, National Institutes of Health, Bethesda, Maryland 20892, USA
| | - Peter J Basser
- Section on Quantitative Imaging and Tissue Sciences, DIBGI, NICHD, National Institutes of Health, Bethesda, Maryland 20892, USA
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27
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Permeability profile of poly(alkyl cyanoacrylate) nanocapsules. J Colloid Interface Sci 2016; 478:394-401. [PMID: 27343463 DOI: 10.1016/j.jcis.2016.06.034] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2016] [Revised: 06/13/2016] [Accepted: 06/13/2016] [Indexed: 11/22/2022]
Abstract
The permeability profile of poly(alkyl cyanoacrylate) nanocapsules is studied using pulsed-field gradient NMR on a variety of tracer molecules of different size and polarity. In addition, the influence of the surfactant layer and of organic tracer molecules on the capsule membrane permeability for water is examined. The aim of the study is a detailed understanding of the dependencies between molecular properties of a given tracer and its capability to permeate the polymer membrane. As expected, the results clearly show that the capsule membrane permeability depends on the size of the tracer molecule: the exchange rate of polyethylene glycols continuously decreases with increasing chain length. However, the permeation rate also varies with the polarity of the tracer molecule: molecules of lower polarity exchange faster than more polar ones. In turn, the capsule membrane permeability is influenced by added organic compounds. Focusing on water as a characteristic permeate and depending on the type of the additive, the permeability can be varied by almost an order of magnitude, offering an opportunity to reversibly switch the uptake and release properties of the capsules.
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28
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Limem S, Calvert P. Diffusion properties of inkjet printed ionic self-assembling polyelectrolyte hydrogels. J Mater Chem B 2015; 3:4569-4576. [PMID: 26417449 PMCID: PMC4582597 DOI: 10.1039/c5tb00503e] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
In the present work, Crank's model was used to characterize solute transport in inkjet printed polyelectrolyte gels. The diffusion of a small charged molecule (fluorescein), various size linear uncharged molecules (dextrans), and a globular protein (albumin) in printed PSS-PDDA with near stoichiometric composition happened respectively at about 10-8, 10-9, and 10-10 cm2/sec. Polyelectrolyte complexes printed with non-stoichiometric ratios were found to be non-equilibrium structures consisting of three populations of polymer chains: fully complexed chains, chains in partial electrostatic interaction with the complex, and chains in excess having minimal interaction with the complex. This structure may be multiple phases. The applicability of hydrodynamic and free volume models to describe transport in printed polyelectrolyte gels was discussed.
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Affiliation(s)
- Skander Limem
- Department of Bioengineering, University of Massachusetts Dartmouth, North Dartmouth, MA - USA
| | - Paul Calvert
- Department of Chemical Engineering, New Mexico Tech, Socorro, NM - USA. Tel: 575.835.5210;
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29
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Bai R, Cloninger A, Czaja W, Basser PJ. Efficient 2D MRI relaxometry using compressed sensing. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2015; 255:88-99. [PMID: 25917134 DOI: 10.1016/j.jmr.2015.04.002] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/19/2015] [Revised: 04/03/2015] [Accepted: 04/05/2015] [Indexed: 05/02/2023]
Abstract
Potential applications of 2D relaxation spectrum NMR and MRI to characterize complex water dynamics (e.g., compartmental exchange) in biology and other disciplines have increased in recent years. However, the large amount of data and long MR acquisition times required for conventional 2D MR relaxometry limits its applicability for in vivo preclinical and clinical MRI. We present a new MR pipeline for 2D relaxometry that incorporates compressed sensing (CS) as a means to vastly reduce the amount of 2D relaxation data needed for material and tissue characterization without compromising data quality. Unlike the conventional CS reconstruction in the Fourier space (k-space), the proposed CS algorithm is directly applied onto the Laplace space (the joint 2D relaxation data) without compressing k-space to reduce the amount of data required for 2D relaxation spectra. This framework is validated using synthetic data, with NMR data acquired in a well-characterized urea/water phantom, and on fixed porcine spinal cord tissue. The quality of the CS-reconstructed spectra was comparable to that of the conventional 2D relaxation spectra, as assessed using global correlation, local contrast between peaks, peak amplitude and relaxation parameters, etc. This result brings this important type of contrast closer to being realized in preclinical, clinical, and other applications.
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Affiliation(s)
- Ruiliang Bai
- Section on Tissue Biophysics and Biomimetics, PPITS, NICHD, National Institutes of Health, Bethesda, MD 20892, USA; Biophysics Program, Institute for Physical Science and Technology, University of Maryland, College Park, MD 20740 USA
| | | | - Wojciech Czaja
- Department of Mathematics, Norbert Wiener Center, University of Maryland, College Park, MD 20742, USA
| | - Peter J Basser
- Section on Tissue Biophysics and Biomimetics, PPITS, NICHD, National Institutes of Health, Bethesda, MD 20892, USA.
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30
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Mitchell J, Chandrasekera TC. Understanding generalized inversions of nuclear magnetic resonance transverse relaxation time in porous media. J Chem Phys 2014; 141:224201. [DOI: 10.1063/1.4903311] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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31
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Mitchell J, Gladden LF, Chandrasekera TC, Fordham EJ. Low-field permanent magnets for industrial process and quality control. PROGRESS IN NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY 2014; 76:1-60. [PMID: 24360243 DOI: 10.1016/j.pnmrs.2013.09.001] [Citation(s) in RCA: 77] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/17/2013] [Revised: 09/19/2013] [Accepted: 09/19/2013] [Indexed: 05/13/2023]
Abstract
In this review we focus on the technology associated with low-field NMR. We present the current state-of-the-art in low-field NMR hardware and experiments, considering general magnet designs, rf performance, data processing and interpretation. We provide guidance on obtaining the optimum results from these instruments, along with an introduction for those new to low-field NMR. The applications of lowfield NMR are now many and diverse. Furthermore, niche applications have spawned unique magnet designs to accommodate the extremes of operating environment or sample geometry. Trying to capture all the applications, methods, and hardware encompassed by low-field NMR would be a daunting task and likely of little interest to researchers or industrialists working in specific subject areas. Instead we discuss only a few applications to highlight uses of the hardware and experiments in an industrial environment. For details on more particular methods and applications, we provide citations to specialized review articles.
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Affiliation(s)
- J Mitchell
- Department of Chemical Engineering and Biotechnology, University of Cambridge, Pembroke Street, Cambridge CB2 3RA, United Kingdom; Schlumberger Gould Research, High Cross, Madingley Road, Cambridge CB3 0EL, United Kingdom
| | - L F Gladden
- Department of Chemical Engineering and Biotechnology, University of Cambridge, Pembroke Street, Cambridge CB2 3RA, United Kingdom.
| | - T C Chandrasekera
- Department of Chemical Engineering and Biotechnology, University of Cambridge, Pembroke Street, Cambridge CB2 3RA, United Kingdom
| | - E J Fordham
- Schlumberger Gould Research, High Cross, Madingley Road, Cambridge CB3 0EL, United Kingdom
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32
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Mitchell J, Chandrasekera TC, Gladden LF. Measurement of the true transverse nuclear magnetic resonance relaxation in the presence of field gradients. J Chem Phys 2013; 139:074205. [DOI: 10.1063/1.4818806] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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33
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Schönhoff M. NMR studies of sorption and adsorption phenomena in colloidal systems. Curr Opin Colloid Interface Sci 2013. [DOI: 10.1016/j.cocis.2013.03.004] [Citation(s) in RCA: 35] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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34
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Bernin D, Topgaard D. NMR diffusion and relaxation correlation methods: New insights in heterogeneous materials. Curr Opin Colloid Interface Sci 2013. [DOI: 10.1016/j.cocis.2013.03.007] [Citation(s) in RCA: 40] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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35
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Fabich HT, Vogt SJ, Sherick ML, Seymour JD, Brown JR, Franklin MJ, Codd SL. Microbial and algal alginate gelation characterized by magnetic resonance. J Biotechnol 2012; 161:320-7. [PMID: 22728394 DOI: 10.1016/j.jbiotec.2012.04.016] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2012] [Revised: 04/10/2012] [Accepted: 04/17/2012] [Indexed: 10/28/2022]
Abstract
Advanced magnetic resonance (MR) relaxation and diffusion correlation measurements and imaging provide a means to non-invasively monitor gelation for biotechnology applications. In this study, MR is used to characterize physical gelation of three alginates with distinct chemical structures; an algal alginate, which is not O-acetylated but contains poly guluronate (G) blocks, bacterial alginate from Pseudomonas aeruginosa, which does not have poly-G blocks, but is O-acetylated at the C2 and/or C3 of the mannuronate residues, and alginate from a P. aeruginosa mutant that lacks O-acetyl groups. The MR data indicate that diffusion-reaction front gelation with Ca(2+) ions generates gels of different bulk homogeneities dependent on the alginate structure. Shorter spin-spin T(2) magnetic relaxation times in the alginate gels that lack O-acetyl groups indicate stronger molecular interaction between the water and biopolymer. The data characterize gel differences over a hierarchy of scales from molecular to system size.
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Affiliation(s)
- Hilary T Fabich
- Department of Chemical and Biological Engineering, Montana State University, Bozeman, MT 59717-3920, USA
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36
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Burcaw LM, Callaghan PT. Correlation of the inhomogeneous field as a measure of sample heterogeneity. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2012; 216:144-151. [PMID: 22361270 DOI: 10.1016/j.jmr.2012.01.016] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/08/2011] [Revised: 01/25/2012] [Accepted: 01/25/2012] [Indexed: 05/31/2023]
Abstract
In this paper we present a method to determine the pore and grain size heterogeneity using a correlation between the transverse relaxation time and the susceptibility induced inhomogeneous magnetic field. By using a CPMG echo train, we are able to correlate T(2) with the inhomogeneous internal magnetic field, B(z)(i). We first introduce a simple simulation to study the correlation between the internal magnetic field gradient, ∣g∣, and B(z)(i), where this correlation is analogous to the T(2)-B(z)(i) correlation with horizontal inversion. We then acquire experimental data from two samples, one a simple bead pack, and the other a more complicated sandstone rock core. We find that indeed this method can indicate the presence of pore and grain size heterogeneities in the sample.
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Affiliation(s)
- Lauren M Burcaw
- National Institute of Neurological Disorders and Stroke, 10 Center Drive, MSC 1063, Bethesda, MD 20892-1063, United States.
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37
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Neudert O, Stapf S, Mattea C. Diffusion exchange NMR spectroscopy in inhomogeneous magnetic fields. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2011; 208:256-261. [PMID: 21185207 DOI: 10.1016/j.jmr.2010.11.014] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/18/2010] [Revised: 11/11/2010] [Accepted: 11/18/2010] [Indexed: 05/30/2023]
Abstract
Two-dimensional diffusion exchange experiments in the presence of a strong, static magnetic field gradient are presented. The experiments are performed in the stray field of a single sided NMR sensor with a proton Larmor frequency of 11.7 MHz. As a consequence of the strong and static magnetic field gradient the magnetization has contributions from different coherence pathways. In order to select the desired coherence pathways, a suitable phase cycling scheme is introduced. The pulse sequence is applied to study diffusion as well as the molecular exchange properties of organic solvents embedded in a mesoporous matrix consisting of a sieve of zeolites with a pore size of 0.8 nm and grain size of 2 μm. This pulse sequence extends the possibilities of the study of transport properties in porous media, with satisfying sensitivity in measurement times of a few hours, in a new generation of relatively inexpensive low-field NMR mobile devices.
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Affiliation(s)
- Oliver Neudert
- Fachgebiet Technische Physik II/Polymerphysik, Institute of Physics, Technische Universität Ilmenau, PO Box 100 565, 98684 Ilmenau, Germany
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38
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Chakraborty D, Choudhury RP, Schönhoff M. Adsorption of aromatic alcohols into the walls of hollow polyelectrolyte capsules. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2010; 26:12940-12947. [PMID: 20608703 DOI: 10.1021/la101836a] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/29/2023]
Abstract
Hollow polyelectrolyte microcapsules prepared by layer-by-layer assembly of polyelectrolytes onto colloidal particles and subsequent core removal are investigated concerning their uptake capacity and the exchange dynamics of aromatic alcohols, that is, hydroquinone and phenol. Diffusion coefficients of the alcohols in the dispersion are determined by pulsed field gradient (PFG) NMR spectroscopy. In addition, spin relaxation rates are determined, which characterize the molecular dynamics. Alcohol molecules in capsule dispersions occur as a bound fraction that is adsorbed to the wall and as a free fraction in the aqueous phase. According to a previously established procedure, from diffusion and relaxation data, population fractions and exchange times are calculated using a two-site model. The adsorbed amounts are well described by Langmuir isotherms, where for hydroquinone as compared to phenol the equilibrium constant is about a factor of 3 larger, and the maximum adsorbed amount about a factor of 3 lower. This indicates the relevance of H bonds for adsorption as well as size effects controlling the uptake capacity of the wall for small molecules.
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Affiliation(s)
- Diptangshu Chakraborty
- Institute of Physical Chemistry, Westfälische Wilhelms-Universität Münster, Corrensstr. 28-30, D-48149 Münster, Germany
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39
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Wende C, Schönhoff M. Dynamics of water in polyelectrolyte multilayers: restricted diffusion and cross-relaxation. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2010; 26:8352-8357. [PMID: 20143885 DOI: 10.1021/la904763j] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/28/2023]
Abstract
The diffusion properties of water in polyelectrolyte multilayers (PEM) are investigated by pulsed field gradient diffusion NMR. The dependence of the mean-square displacement on the observation time does not agree to Gaussian diffusion, suggesting restricted diffusion in a porous structure. However, the extraction of a pore size in a model of restricted diffusion yields a very large pore size of several micrometers. The additional influence of cross-relaxation of water and polymer spins is investigated in Goldman-Shen experiments. These demonstrate a strong influence of cross-relaxation rates on diffusion echo decays, such that pore sizes obtained from the model of restricted diffusion have to be corrected. Corrected pore sizes are about 4 microm and reflect the existence of domains of lower polymer density and thus faster water diffusion. These heterogeneities occur upon PEM preparation at high salt content for large layer numbers and are detected in the surface morphology, too.
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Affiliation(s)
- Christina Wende
- Institut für Physikalische Chemie, Westfälische Wilhelms-Universität Münster, Corrensstr. 28/30, D-48147 Münster, Germany
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40
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41
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Choudhury RP, Galvosas P, Schönhoff M. Scaling Law of Poly(ethylene oxide) Chain Permeation through a Nanoporous Wall. J Phys Chem B 2008; 112:13245-51. [DOI: 10.1021/jp804680q] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Rudra Prosad Choudhury
- Institute of Physical Chemistry, Westfälische Wilhelms-Universität Münster, Corrensstrasse 30/36, D-48149 Münster, Germany, International NRW Graduate School of Chemistry (GSC-MS), 48149 Münster, Germany, and Faculty of Physics and Earth Science, University of Leipzig, D- 04103, Leipzig, Germany
| | - Petrik Galvosas
- Institute of Physical Chemistry, Westfälische Wilhelms-Universität Münster, Corrensstrasse 30/36, D-48149 Münster, Germany, International NRW Graduate School of Chemistry (GSC-MS), 48149 Münster, Germany, and Faculty of Physics and Earth Science, University of Leipzig, D- 04103, Leipzig, Germany
| | - Monika Schönhoff
- Institute of Physical Chemistry, Westfälische Wilhelms-Universität Münster, Corrensstrasse 30/36, D-48149 Münster, Germany, International NRW Graduate School of Chemistry (GSC-MS), 48149 Münster, Germany, and Faculty of Physics and Earth Science, University of Leipzig, D- 04103, Leipzig, Germany
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42
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Song YQ, Zielinski L, Ryu S. Two-dimensional NMR of diffusion systems. PHYSICAL REVIEW LETTERS 2008; 100:248002. [PMID: 18643630 DOI: 10.1103/physrevlett.100.248002] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/26/2008] [Indexed: 05/26/2023]
Abstract
We consider diffusion in porous media with well-connected pore space for which isolated-pore models are insufficient. Explicit pore-to-pore exchange parameters were introduced in recent 2D NMR experiments. However, such parameters capture only certain aspects of the interpore spin dynamic which, for single-fluid saturated media, are wholly determined by diffusion. Here, we develop a theoretical approach suitable for a quantitative description of such 2D NMR taking a full account of the underlying diffusion modes. We use simple models of one pore and two coupled pores to demonstrate the rich behavior of 2D NMR.
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Affiliation(s)
- Yi-Qiao Song
- Schlumberger-Doll Research, 1 Hampshire Street, Cambridge, Massachusetts 02139, USA
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43
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Choudhury RP, Schönhoff M. Pulsed field gradient NMR study of phenol binding and exchange in dispersions of hollow polyelectrolyte capsules. J Chem Phys 2008; 127:234702. [PMID: 18154404 DOI: 10.1063/1.2807239] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
The distribution and exchange dynamics of phenol molecules in colloidal dispersions of submicron hollow polymeric capsules is investigated by pulsed field gradient NMR (PFG-NMR). The capsules are prepared by layer-by-layer assembly of polyelectrolyte multilayers on silica particles, followed by dissolution of the silica core. In capsule dispersion, (1)H PFG echo decays of phenol are single exponentials, implying fast exchange of phenol between a free site and a capsule-bound site. However, apparent diffusion coefficients extracted from the echo decays depend on the diffusion time, which is typically not the case for the fast exchange limit. We attribute this to a particular regime, where apparent diffusion coefficients are observed, which arise from the signal of free phenol only but are influenced by exchange with molecules bound to the capsule, which exhibit a very fast spin relaxation. Indeed, relaxation rates of phenol are strongly enhanced in the presence of capsules, indicating binding to the capsule wall rather than encapsulation in the interior. We present a quantitative analysis in terms of a combined diffusion-relaxation model, where exchange times can be determined from diffusion and spin relaxation experiments even in this particular regime, where the bound site acts as a relaxation sink. The result of the analysis yields exchange times between free phenol and phenol bound to the capsule wall, which are on the order of 30 ms and thus slower than the diffusion controlled limit. From bound and free fractions an adsorption isotherm of phenol to the capsule wall is extracted. The binding mechanism and the exchange mechanism are discussed. The introduction of the global analysis of diffusion as well as relaxation echo decays presented here is of large relevance for adsorption dynamics in colloidal systems or other systems, where the standard diffusion echo decay analysis is complicated by rapidly relaxing boundary conditions.
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Affiliation(s)
- Rudra Prosad Choudhury
- Institut für Physikalische Chemie, Wesfälische Wilhelms-Universität Münster, D-48149 Münster, Germany.
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44
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Galvosas P, Qiao Y, Schönhoff M, Callaghan PT. On the use of 2D correlation and exchange NMR spectroscopy in organic porous materials. Magn Reson Imaging 2007; 25:497-500. [PMID: 17466772 DOI: 10.1016/j.mri.2006.11.009] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/21/2006] [Accepted: 11/30/2006] [Indexed: 11/30/2022]
Abstract
Two-dimensional (2D) nuclear magnetic resonance (NMR) methods for the investigation of correlation and exchange have been introduced in recent years and have been applied to a range of different systems. Here, we report on the use of 2D NMR diffusion-diffusion correlation spectroscopy for the investigation of diffusion anisotropy in cellular plant tissues and of diffusion-diffusion exchange spectroscopy for the study of the diffusive exchange of dextran in a dispersion of polyelectrolyte multilayer hollow capsules. Furthermore, diffusion-relaxation correlation spectroscopy was applied to both systems.
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Affiliation(s)
- Petrik Galvosas
- Faculty of Physics and Earth Sciences, University of Leipzig, D-04103 Leipzig, Germany.
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45
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Callaghan PT, Arns CH, Galvosas P, Hunter MW, Qiao Y, Washburn KE. Recent Fourier and Laplace perspectives for multidimensional NMR in porous media. Magn Reson Imaging 2007; 25:441-4. [PMID: 17466759 DOI: 10.1016/j.mri.2007.01.114] [Citation(s) in RCA: 53] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2007] [Accepted: 01/13/2007] [Indexed: 12/01/2022]
Abstract
Multidimensional NMR techniques used in the measurement of molecular displacements, whether by diffusion or advection, and in the measurement of nuclear spin relaxation times are categorised. Fourier-Fourier, Fourier-Laplace and Laplace-Laplace methods are identified, and recent developments discussed in terms of the separation, correlation and exchange perspective of multidimensional NMR spectroscopy.
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Affiliation(s)
- Paul T Callaghan
- MacDiarmid Institute for Advanced Materials and Nanotechnology, School of Chemical and Physical Sciences, Victoria University of Wellington, ACT 0200, Wellington 6140, New Zealand.
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46
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Washburn KE, Callaghan PT. Tracking pore to pore exchange using relaxation exchange spectroscopy. PHYSICAL REVIEW LETTERS 2006; 97:175502. [PMID: 17155481 DOI: 10.1103/physrevlett.97.175502] [Citation(s) in RCA: 48] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/03/2006] [Indexed: 05/12/2023]
Abstract
We observe the movement of water over time between pores of differing sizes in Castlegate sandstone. To achieve this, we perform an NMR transverse relaxation exchange experiment for several mixing times. The resulting data are converted to 2D T2 distributions using a 2D inverse Laplace transform (ILT). We show for the first time that quantitative analysis of ILT distributions enables one to extract characteristic times for different pores sizes. This information is potentially useful for permeability determination as well as better understanding of exchange between specific pore subpopulations.
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Affiliation(s)
- K E Washburn
- MacDiarmid Institute for Advanced Materials and Nanotechnology, School of Chemical and Physical Sciences, Victoria University of Wellington, New Zealand
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47
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Rusu M, Kuckling D, Möhwald H, Schönhoff M. Adsorption of novel thermosensitive graft-copolymers: Core–shell particles prepared by polyelectrolyte multilayer self-assembly. J Colloid Interface Sci 2006; 298:124-31. [PMID: 16413569 DOI: 10.1016/j.jcis.2005.12.027] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/22/2005] [Accepted: 12/18/2005] [Indexed: 10/25/2022]
Abstract
The adsorption properties of thermosensitive graft-copolymers are investigated with the aim of developing self-assembled multilayers from these copolymers. The copolymers consist of a thermoreversible main chain of poly(N-isopropylacrylamid) and a weak polyelectrolyte, poly(2-vinylpyridine), as grafted side chains. Zeta-potential, single particle light scattering and adsorption isotherms monitor the adsorption of the thermoreversible copolymers to precoated colloidal particles. The results show a smaller surface coverage for a larger density of grafted chains. The surface coverage is discussed in terms of surface charge density in the adsorbed monolayer. Taking into account the monolayer adsorption properties, conditions are developed for the multilayer formation from these copolymers. A low pH provides a sufficient charge density of the grafted chains to achieve a surface charge reversal of the colloids upon adsorption. The charge reversal after each adsorbed layer is monitored by zeta-potential and the increase of the thickness is determined by light scattering. Stable and reproducible multilayers are obtained. The results imply that the conformation of the thermosensitive component in multilayers depends strongly on the grafting density, where the polymer with a higher grafting density adsorbs in a flat conformation while that with a lower grafting density adsorbs with more loops.
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Affiliation(s)
- Mihaela Rusu
- Max Planck Institut für Kolloid- und Grenzflächenforschung, Am Mühlenberg 1, D-14476 Potsdam-Golm, Germany
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48
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Qiao Y, Galvosas P, Callaghan PT. Diffusion correlation NMR spectroscopic study of anisotropic diffusion of water in plant tissues. Biophys J 2005; 89:2899-905. [PMID: 16100271 PMCID: PMC1366786 DOI: 10.1529/biophysj.105.064709] [Citation(s) in RCA: 52] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/17/2005] [Accepted: 07/13/2005] [Indexed: 11/18/2022] Open
Abstract
The anisotropic diffusion of water in chive (Allium schoenoprasum) tissues has been investigated using two-dimensional nuclear magnetic resonance methods: diffusion-diffusion correlation spectroscopy and diffusion-relaxation correlation spectroscopy. Corresponding one-dimensional T2 and diffusion measurements confirm independently the results of the two-dimensional investigations. In particular the diffusion-diffusion correlation spectroscopy method proves to be very powerful in resolving the different components of the diffusion tensor at different sites in the sample.
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Affiliation(s)
- Y Qiao
- MacDiarmid Institute for Advanced Materials and Nanotechnology, School of Chemical and Physical Sciences, Victoria University of Wellington, Wellington, New Zealand.
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