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For: Shimojo F, Hattori S, Kalia RK, Kunaseth M, Mou W, Nakano A, Nomura KI, Ohmura S, Rajak P, Shimamura K, Vashishta P. A divide-conquer-recombine algorithmic paradigm for large spatiotemporal quantum molecular dynamics simulations. J Chem Phys 2014;140:18A529. [DOI: 10.1063/1.4869342] [Citation(s) in RCA: 54] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]  Open
Number Cited by Other Article(s)
1
Linker TM, Dagar R, Feinberg A, Sahel-Schackis S, Nomura KI, Nakano A, Shimojo F, Vashishta P, Bergmann U, Kling MF, Summers AM. Catalysis in Extreme Field Environments: A Case Study of Strongly Ionized SiO2 Nanoparticle Surfaces. J Am Chem Soc 2024;146:27563-27570. [PMID: 39327984 PMCID: PMC11467989 DOI: 10.1021/jacs.4c08550] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2024] [Revised: 09/16/2024] [Accepted: 09/17/2024] [Indexed: 09/28/2024]
2
Hokyo H, Ito K, Kalia RK, Kapadia R, Nakano A, Shimamura K, Shimojo F, Vashishta P. Photoinduced Negative Differential Resistance at a Graphene/Silicon Interface: A Nonadiabatic Quantum Molecular Dynamics Study. J Phys Chem Lett 2024;15:9226-9232. [PMID: 39225635 DOI: 10.1021/acs.jpclett.4c02272] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/04/2024]
3
Dagar R, Zhang W, Rosenberger P, Linker TM, Sousa-Castillo A, Neuhaus M, Mitra S, Biswas S, Feinberg A, Summers AM, Nakano A, Vashishta P, Shimojo F, Wu J, Vera CC, Maier SA, Cortés E, Bergues B, Kling MF. Tracking surface charge dynamics on single nanoparticles. SCIENCE ADVANCES 2024;10:eadp1890. [PMID: 39110806 PMCID: PMC11305382 DOI: 10.1126/sciadv.adp1890] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/12/2024] [Accepted: 07/02/2024] [Indexed: 08/10/2024]
4
Negre CFA, Wall ME, Niklasson AMN. Graph-based quantum response theory and shadow Born-Oppenheimer molecular dynamics. J Chem Phys 2023;158:074108. [PMID: 36813723 DOI: 10.1063/5.0137119] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]  Open
5
Linker T, Nomura KI, Fukushima S, Kalia RK, Krishnamoorthy A, Nakano A, Shimamura K, Shimojo F, Vashishta P. Squishing Skyrmions: Symmetry-Guided Dynamic Transformation of Polar Topologies Under Compression. J Phys Chem Lett 2022;13:11335-11345. [PMID: 36454058 DOI: 10.1021/acs.jpclett.2c03029] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/17/2023]
6
Workman AS. Comparative analyses and molecular videography of MD simulations on WT human SOD1. COMPUT THEOR CHEM 2022. [DOI: 10.1016/j.comptc.2022.113929] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
7
Linker T, Fukushima S, Kalia RK, Krishnamoorthy A, Nakano A, Nomura KI, Shimamura K, Shimojo F, Vashishta P. Towards computational polar-topotronics: Multiscale neural-network quantum molecular dynamics simulations of polar vortex states in SrTiO3/PbTiO3 nanowires. FRONTIERS IN NANOTECHNOLOGY 2022. [DOI: 10.3389/fnano.2022.884149] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]  Open
8
Linker T, Nomura KI, Aditya A, Fukshima S, Kalia RK, Krishnamoorthy A, Nakano A, Rajak P, Shimmura K, Shimojo F, Vashishta P. Exploring far-from-equilibrium ultrafast polarization control in ferroelectric oxides with excited-state neural network quantum molecular dynamics. SCIENCE ADVANCES 2022;8:eabk2625. [PMID: 35319991 PMCID: PMC8942355 DOI: 10.1126/sciadv.abk2625] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/02/2021] [Accepted: 01/31/2022] [Indexed: 06/14/2023]
9
Linker T, Wang Y, Mishra A, Kamal D, Cao Y, Kalia RK, Nakano A, Ramprasad R, Shimojo F, Sotzing G, Vashishta P. Deep Well Trapping of Hot Carriers in a Hexagonal Boron Nitride Coating of Polymer Dielectrics. ACS APPLIED MATERIALS & INTERFACES 2021;13:60393-60400. [PMID: 34890506 DOI: 10.1021/acsami.1c14587] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
10
Smith B, Shakiba M, Akimov AV. Crystal Symmetry and Static Electron Correlation Greatly Accelerate Nonradiative Dynamics in Lead Halide Perovskites. J Phys Chem Lett 2021;12:2444-2453. [PMID: 33661640 DOI: 10.1021/acs.jpclett.0c03799] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
11
Hong S, Tiwari S, Krishnamoorthy A, Nomura KI, Sheng C, Kalia RK, Nakano A, Shimojo F, Vashishta P. Sulfurization of MoO3 in the Chemical Vapor Deposition Synthesis of MoS2 Enhanced by an H2S/H2 Mixture. J Phys Chem Lett 2021;12:1997-2003. [PMID: 33596379 DOI: 10.1021/acs.jpclett.0c03280] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
12
Linker T, Tiwari S, Fukushima S, Kalia RK, Krishnamoorthy A, Nakano A, Nomura KI, Shimamura K, Shimojo F, Vashishta P. Optically Induced Three-Stage Picosecond Amorphization in Low-Temperature SrTiO3. J Phys Chem Lett 2020;11:9605-9612. [PMID: 33124829 DOI: 10.1021/acs.jpclett.0c02873] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
13
Misawa M, Fukushima S, Koura A, Shimamura K, Shimojo F, Tiwari S, Nomura KI, Kalia RK, Nakano A, Vashishta P. Application of First-Principles-Based Artificial Neural Network Potentials to Multiscale-Shock Dynamics Simulations on Solid Materials. J Phys Chem Lett 2020;11:4536-4541. [PMID: 32443935 DOI: 10.1021/acs.jpclett.0c00637] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
14
Smith B, Akimov AV. Modeling nonadiabatic dynamics in condensed matter materials: some recent advances and applications. JOURNAL OF PHYSICS. CONDENSED MATTER : AN INSTITUTE OF PHYSICS JOURNAL 2020;32:073001. [PMID: 31661681 DOI: 10.1088/1361-648x/ab5246] [Citation(s) in RCA: 33] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
15
Shen C, Liu Y, Wu J, Xu C, Cui D, Li Z, Liu Q, Li Y, Wang Y, Cao X, Kumazoe H, Shimojo F, Krishnamoorthy A, Kalia RK, Nakano A, Vashishta PD, Amer MR, Abbas AN, Wang H, Wu W, Zhou C. Tellurene Photodetector with High Gain and Wide Bandwidth. ACS NANO 2020;14:303-310. [PMID: 31860271 DOI: 10.1021/acsnano.9b04507] [Citation(s) in RCA: 50] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/07/2023]
16
Linker TM, Tiwari S, Kumazoe H, Fukushima S, Kalia RK, Nakano A, Ramprasad R, Shimojo F, Vashishta P. Field-Induced Carrier Localization Transition in Dielectric Polymers. J Phys Chem Lett 2020;11:352-358. [PMID: 31867972 DOI: 10.1021/acs.jpclett.9b03147] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
17
Hada M, Miyata K, Ohmura S, Arashida Y, Ichiyanagi K, Katayama I, Suzuki T, Chen W, Mizote S, Sawa T, Yokoya T, Seki T, Matsuo J, Tokunaga T, Itoh C, Tsuruta K, Fukaya R, Nozawa S, Adachi SI, Takeda J, Onda K, Koshihara SY, Hayashi Y, Nishina Y. Selective Reduction Mechanism of Graphene Oxide Driven by the Photon Mode versus the Thermal Mode. ACS NANO 2019;13:10103-10112. [PMID: 31450883 DOI: 10.1021/acsnano.9b03060] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
18
Krishnamoorthy A, Lin MF, Zhang X, Weninger C, Ma R, Britz A, Tiwary CS, Kochat V, Apte A, Yang J, Park S, Li R, Shen X, Wang X, Kalia R, Nakano A, Shimojo F, Fritz D, Bergmann U, Ajayan P, Vashishta P. Optical Control of Non-Equilibrium Phonon Dynamics. NANO LETTERS 2019;19:4981-4989. [PMID: 31260315 DOI: 10.1021/acs.nanolett.9b01179] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
19
Kumazoe H, Fukushima S, Tiwari S, Kim C, Huan TD, Kalia RK, Nakano A, Ramprasad R, Shimojo F, Vashishta P. Hot-Carrier Dynamics and Chemistry in Dielectric Polymers. J Phys Chem Lett 2019;10:3937-3943. [PMID: 31264426 DOI: 10.1021/acs.jpclett.9b01344] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
20
Ohmura S, Shimojo F. Structural change in liquid sulphur from chain polymeric liquid to atomic simple liquid under high pressure. JOURNAL OF PHYSICS. CONDENSED MATTER : AN INSTITUTE OF PHYSICS JOURNAL 2019;31:215101. [PMID: 30897066 DOI: 10.1088/1361-648x/ab0a35] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
21
Chen L, Tran HD, Ramprasad R. Atomistic mechanisms for chemical defects formation in polyethylene. J Chem Phys 2018;149:234902. [DOI: 10.1063/1.5063944] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
22
Sheng C, Hong S, Krishnamoorthy A, Kalia RK, Nakano A, Shimojo F, Vashishta P. Role of H Transfer in the Gas-Phase Sulfidation Process of MoO3: A Quantum Molecular Dynamics Study. J Phys Chem Lett 2018;9:6517-6523. [PMID: 30296091 DOI: 10.1021/acs.jpclett.8b02151] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
23
Richters D, Kühne TD. Linear-scaling self-consistent field theory based molecular dynamics: application to C60buckyballs colliding with graphite. MOLECULAR SIMULATION 2018. [DOI: 10.1080/08927022.2018.1511899] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
24
Kumazoe H, Krishnamoorthy A, Bassman L, Kalia RK, Nakano A, Shimojo F, Vashishta P. Photo-induced lattice contraction in layered materials. JOURNAL OF PHYSICS. CONDENSED MATTER : AN INSTITUTE OF PHYSICS JOURNAL 2018;30:32LT02. [PMID: 29957601 DOI: 10.1088/1361-648x/aad022] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
25
Bassman L, Krishnamoorthy A, Kumazoe H, Misawa M, Shimojo F, Kalia RK, Nakano A, Vashishta P. Electronic Origin of Optically-Induced Sub-Picosecond Lattice Dynamics in MoSe2 Monolayer. NANO LETTERS 2018;18:4653-4658. [PMID: 29990437 DOI: 10.1021/acs.nanolett.8b00474] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
26
Lin MF, Kochat V, Krishnamoorthy A, Bassman Oftelie L, Weninger C, Zheng Q, Zhang X, Apte A, Tiwary CS, Shen X, Li R, Kalia R, Ajayan P, Nakano A, Vashishta P, Shimojo F, Wang X, Fritz DM, Bergmann U. Ultrafast non-radiative dynamics of atomically thin MoSe2. Nat Commun 2017;8:1745. [PMID: 29170416 PMCID: PMC5701075 DOI: 10.1038/s41467-017-01844-2] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2017] [Accepted: 10/20/2017] [Indexed: 11/08/2022]  Open
27
Misawa M, Ryuo E, Yoshida K, Kalia RK, Nakano A, Nishiyama N, Shimojo F, Vashishta P, Wakai F. Picosecond amorphization of SiO2 stishovite under tension. SCIENCE ADVANCES 2017;3:e1602339. [PMID: 28508056 PMCID: PMC5429036 DOI: 10.1126/sciadv.1602339] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/22/2016] [Accepted: 03/13/2017] [Indexed: 06/07/2023]
28
Niklasson AMN, Mniszewski SM, Negre CFA, Cawkwell MJ, Swart PJ, Mohd-Yusof J, Germann TC, Wall ME, Bock N, Rubensson EH, Djidjev H. Graph-based linear scaling electronic structure theory. J Chem Phys 2016;144:234101. [DOI: 10.1063/1.4952650] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
29
Li Y, Kalia RK, Misawa M, Nakano A, Nomura KI, Shimamura K, Shimojo F, Vashishta P. Anisotropic mechanoresponse of energetic crystallites: a quantum molecular dynamics study of nano-collision. NANOSCALE 2016;8:9714-9720. [PMID: 27110831 DOI: 10.1039/c5nr08769d] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
30
Wei T, Ma H, Nakano A. Decaheme Cytochrome MtrF Adsorption and Electron Transfer on Gold Surface. J Phys Chem Lett 2016;7:929-36. [PMID: 26886399 DOI: 10.1021/acs.jpclett.5b02746] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
31
The nature of free-carrier transport in organometal halide perovskites. Sci Rep 2016;6:19599. [PMID: 26781627 PMCID: PMC4726051 DOI: 10.1038/srep19599] [Citation(s) in RCA: 38] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/19/2015] [Accepted: 12/15/2015] [Indexed: 01/26/2023]  Open
32
Wang LW. Divide-and-conquer quantum mechanical material simulations with exascale supercomputers. Natl Sci Rev 2014. [DOI: 10.1093/nsr/nwu060] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]  Open
33
Arita M, Bowler DR, Miyazaki T. Stable and Efficient Linear Scaling First-Principles Molecular Dynamics for 10000+ Atoms. J Chem Theory Comput 2014;10:5419-25. [DOI: 10.1021/ct500847y] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
34
Kinetic Monte Carlo Simulations and Molecular Conductance Measurements of the Bacterial Decaheme Cytochrome MtrF. ChemElectroChem 2014. [DOI: 10.1002/celc.201402211] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
35
Shimamura K, Shimojo F, Kalia RK, Nakano A, Nomura KI, Vashishta P. Hydrogen-on-demand using metallic alloy nanoparticles in water. NANO LETTERS 2014;14:4090-4096. [PMID: 24960149 DOI: 10.1021/nl501612v] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
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