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For: Loudet O, Michael TP, Burger BT, Le Metté C, Mockler TC, Weigel D, Chory J. A zinc knuckle protein that negatively controls morning-specific growth in Arabidopsis thaliana. Proc Natl Acad Sci U S A 2008;105:17193-8. [PMID: 18971337 DOI: 10.1073/pnas.0807264105] [Citation(s) in RCA: 62] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]  Open
Number Cited by Other Article(s)
1
Perrella G, Vellutini E, Beveridge A, Hamilton G, Herzyk P, Kaiserli E. TANDEM ZINC-FINGER/PLUS3 integrates light signaling and flowering regulatory pathways at the chromatin level. THE NEW PHYTOLOGIST 2025. [PMID: 40356194 DOI: 10.1111/nph.70213] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/16/2025] [Accepted: 04/21/2025] [Indexed: 05/15/2025]
2
Feng Z, Zioutopoulou A, Xu T, Li J, Kaiserli E. TANDEM ZINC-FINGER/PLUS3: a multifaceted integrator of light signaling. TRENDS IN PLANT SCIENCE 2024:S1360-1385(24)00315-7. [PMID: 39701906 DOI: 10.1016/j.tplants.2024.11.014] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/13/2024] [Revised: 11/21/2024] [Accepted: 11/22/2024] [Indexed: 12/21/2024]
3
Willige BC, Yoo CY, Saldierna Guzmán JP. What is going on inside of phytochrome B photobodies? THE PLANT CELL 2024;36:2065-2085. [PMID: 38511271 PMCID: PMC11132900 DOI: 10.1093/plcell/koae084] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/30/2023] [Revised: 12/20/2023] [Accepted: 01/08/2024] [Indexed: 03/22/2024]
4
Shahzad Z, Tournaire-Roux C, Canut M, Adamo M, Roeder J, Verdoucq L, Martinière A, Amtmann A, Santoni V, Grill E, Loudet O, Maurel C. Protein kinase SnRK2.4 is a key regulator of aquaporins and root hydraulics in Arabidopsis. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2024;117:264-279. [PMID: 37844131 DOI: 10.1111/tpj.16494] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/02/2023] [Revised: 09/06/2023] [Accepted: 09/14/2023] [Indexed: 10/18/2023]
5
Islam W, Waheed A, Idrees A, Rashid J, Zeng F. Role of plant microRNAs and their corresponding pathways in fluctuating light conditions. BIOCHIMICA ET BIOPHYSICA ACTA. MOLECULAR CELL RESEARCH 2023;1870:119304. [PMID: 35671849 DOI: 10.1016/j.bbamcr.2022.119304] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/18/2022] [Revised: 05/25/2022] [Accepted: 05/30/2022] [Indexed: 01/03/2023]
6
Zhu Y, Narsai R, He C, Wang Y, Berkowitz O, Whelan J, Liew LC. Coordinated regulation of the mitochondrial retrograde response by circadian clock regulators and ANAC017. PLANT COMMUNICATIONS 2023;4:100501. [PMID: 36463409 PMCID: PMC9860193 DOI: 10.1016/j.xplc.2022.100501] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/19/2022] [Revised: 11/10/2022] [Accepted: 11/30/2022] [Indexed: 06/16/2023]
7
Sweetman C, Waterman CD, Wong DC, Day DA, Jenkins CL, Soole KL. Altering the balance between AOX1A and NDB2 expression affects a common set of transcripts in Arabidopsis. FRONTIERS IN PLANT SCIENCE 2022;13:876843. [PMID: 36466234 PMCID: PMC9716356 DOI: 10.3389/fpls.2022.876843] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/15/2022] [Accepted: 10/24/2022] [Indexed: 06/17/2023]
8
Fang W, Vellutini E, Perrella G, Kaiserli E. TANDEM ZINC-FINGER/PLUS3 regulates phytochrome B abundance and signaling to fine-tune hypocotyl growth. THE PLANT CELL 2022;34:4213-4231. [PMID: 35929801 PMCID: PMC9614508 DOI: 10.1093/plcell/koac236] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/22/2022] [Accepted: 07/28/2022] [Indexed: 05/19/2023]
9
Ronald J, Su C, Wang L, Davis SJ. Cellular localization of Arabidopsis EARLY FLOWERING3 is responsive to light quality. PLANT PHYSIOLOGY 2022;190:1024-1036. [PMID: 35191492 PMCID: PMC9516731 DOI: 10.1093/plphys/kiac072] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/09/2021] [Accepted: 12/07/2021] [Indexed: 05/13/2023]
10
Li C, Qi L, Zhang S, Dong X, Jing Y, Cheng J, Feng Z, Peng J, Li H, Zhou Y, Wang X, Han R, Duan J, Terzaghi W, Lin R, Li J. Mutual upregulation of HY5 and TZP in mediating phytochrome A signaling. THE PLANT CELL 2022;34:633-654. [PMID: 34741605 PMCID: PMC8774092 DOI: 10.1093/plcell/koab254] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/10/2021] [Accepted: 10/08/2021] [Indexed: 05/25/2023]
11
Hu Z, Nie Z, Yan C, Huang H, Ma X, Wang Y, Ye N, Tuskan GA, Yang X, Yin H. Transcriptome and Degradome Profiling Reveals a Role of miR530 in the Circadian Regulation of Gene Expression in Kalanchoë marnieriana. Cells 2021;10:1526. [PMID: 34204368 PMCID: PMC8233840 DOI: 10.3390/cells10061526] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/13/2021] [Revised: 06/09/2021] [Accepted: 06/13/2021] [Indexed: 11/16/2022]  Open
12
Michael TP, Ernst E, Hartwick N, Chu P, Bryant D, Gilbert S, Ortleb S, Baggs EL, Sree KS, Appenroth KJ, Fuchs J, Jupe F, Sandoval JP, Krasileva KV, Borisjuk L, Mockler TC, Ecker JR, Martienssen RA, Lam E. Genome and time-of-day transcriptome of Wolffia australiana link morphological minimization with gene loss and less growth control. Genome Res 2021;31:225-238. [PMID: 33361111 PMCID: PMC7849404 DOI: 10.1101/gr.266429.120] [Citation(s) in RCA: 42] [Impact Index Per Article: 10.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/25/2020] [Accepted: 12/16/2020] [Indexed: 11/24/2022]
13
Jasinski S, Fabrissin I, Masson A, Marmagne A, Lécureuil A, Bill L, Chardon F. ACCELERATED CELL DEATH 6 Acts on Natural Leaf Senescence and Nitrogen Fluxes in Arabidopsis. FRONTIERS IN PLANT SCIENCE 2021;11:611170. [PMID: 33488657 PMCID: PMC7817547 DOI: 10.3389/fpls.2020.611170] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/28/2020] [Accepted: 11/23/2020] [Indexed: 05/30/2023]
14
Matsusaka D, Filiault D, Sanchez DH, Botto JF. Ultra-High-Density QTL Marker Mapping for Seedling Photomorphogenesis Mediating Arabidopsis Establishment in Southern Patagonia. FRONTIERS IN PLANT SCIENCE 2021;12:677728. [PMID: 34367202 PMCID: PMC8343176 DOI: 10.3389/fpls.2021.677728] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/08/2021] [Accepted: 06/22/2021] [Indexed: 05/15/2023]
15
Zhang Y, Liu H, Yan G. Characterization of near-isogenic lines confirmed QTL and revealed candidate genes for plant height and yield-related traits in common wheat. MOLECULAR BREEDING : NEW STRATEGIES IN PLANT IMPROVEMENT 2021;41:4. [PMID: 37309530 PMCID: PMC10231565 DOI: 10.1007/s11032-020-01196-8] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/18/2020] [Accepted: 12/14/2020] [Indexed: 06/13/2023]
16
Liebers M, Gillet FX, Israel A, Pounot K, Chambon L, Chieb M, Chevalier F, Ruedas R, Favier A, Gans P, Boeri Erba E, Cobessi D, Pfannschmidt T, Blanvillain R. Nucleo-plastidic PAP8/pTAC6 couples chloroplast formation with photomorphogenesis. EMBO J 2020;39:e104941. [PMID: 33001465 DOI: 10.15252/embj.2020104941] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2020] [Revised: 09/02/2020] [Accepted: 09/09/2020] [Indexed: 12/29/2022]  Open
17
Aceituno-Valenzuela U, Micol-Ponce R, Ponce MR. Genome-wide analysis of CCHC-type zinc finger (ZCCHC) proteins in yeast, Arabidopsis, and humans. Cell Mol Life Sci 2020;77:3991-4014. [PMID: 32303790 PMCID: PMC11105112 DOI: 10.1007/s00018-020-03518-7] [Citation(s) in RCA: 33] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2019] [Revised: 03/06/2020] [Accepted: 03/30/2020] [Indexed: 12/22/2022]
18
Sun W, Xu XH, Li Y, Xie L, He Y, Li W, Lu X, Sun H, Xie X. OsmiR530 acts downstream of OsPIL15 to regulate grain yield in rice. THE NEW PHYTOLOGIST 2020;226:823-837. [PMID: 31883119 PMCID: PMC7187366 DOI: 10.1111/nph.16399] [Citation(s) in RCA: 33] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/25/2019] [Accepted: 12/15/2019] [Indexed: 05/03/2023]
19
Marchadier E, Hanemian M, Tisné S, Bach L, Bazakos C, Gilbault E, Haddadi P, Virlouvet L, Loudet O. The complex genetic architecture of shoot growth natural variation in Arabidopsis thaliana. PLoS Genet 2019;15:e1007954. [PMID: 31009456 PMCID: PMC6476473 DOI: 10.1371/journal.pgen.1007954] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/16/2018] [Accepted: 01/11/2019] [Indexed: 12/16/2022]  Open
20
ZINC-FINGER interactions mediate transcriptional regulation of hypocotyl growth in Arabidopsis. Proc Natl Acad Sci U S A 2018;115:E4503-E4511. [PMID: 29686058 PMCID: PMC5948964 DOI: 10.1073/pnas.1718099115] [Citation(s) in RCA: 33] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
21
Zhang S, Li C, Zhou Y, Wang X, Li H, Feng Z, Chen H, Qin G, Jin D, Terzaghi W, Gu H, Qu LJ, Kang D, Deng XW, Li J. TANDEM ZINC-FINGER/PLUS3 Is a Key Component of Phytochrome A Signaling. THE PLANT CELL 2018;30:835-852. [PMID: 29588390 PMCID: PMC5973844 DOI: 10.1105/tpc.17.00677] [Citation(s) in RCA: 44] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/29/2017] [Revised: 01/19/2018] [Accepted: 03/24/2018] [Indexed: 05/17/2023]
22
Salomé PA. Developmental Timing Is Everything: TZP and Phytochrome Signaling. THE PLANT CELL 2018;30:741-742. [PMID: 29653968 PMCID: PMC5969283 DOI: 10.1105/tpc.18.00302] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
23
Sánchez-Retuerta C, Suaréz-López P, Henriques R. Under a New Light: Regulation of Light-Dependent Pathways by Non-coding RNAs. FRONTIERS IN PLANT SCIENCE 2018;9:962. [PMID: 30140270 PMCID: PMC6095000 DOI: 10.3389/fpls.2018.00962] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/23/2018] [Accepted: 06/14/2018] [Indexed: 05/18/2023]
24
Ning P, Zhou Y, Gao L, Sun Y, Zhou W, Liu F, Yao Z, Xie L, Wang J, Gong C. Unraveling the microRNA of Caragana korshinskii along a precipitation gradient on the Loess Plateau, China, using high-throughput sequencing. PLoS One 2017;12:e0172017. [PMID: 28207805 PMCID: PMC5313209 DOI: 10.1371/journal.pone.0172017] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/17/2016] [Accepted: 01/30/2017] [Indexed: 12/02/2022]  Open
25
Perrella G, Kaiserli E. Light behind the curtain: photoregulation of nuclear architecture and chromatin dynamics in plants. THE NEW PHYTOLOGIST 2016;212:908-919. [PMID: 27813089 PMCID: PMC5111779 DOI: 10.1111/nph.14269] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/12/2016] [Accepted: 09/14/2016] [Indexed: 05/24/2023]
26
Wang Z, Jin K, Xia Y. Transcriptional analysis of the conidiation pattern shift of the entomopathogenic fungus Metarhizium acridum in response to different nutrients. BMC Genomics 2016;17:586. [PMID: 27506833 PMCID: PMC4979188 DOI: 10.1186/s12864-016-2971-0] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2016] [Accepted: 07/27/2016] [Indexed: 12/14/2022]  Open
27
Pearce S, Kippes N, Chen A, Debernardi JM, Dubcovsky J. RNA-seq studies using wheat PHYTOCHROME B and PHYTOCHROME C mutants reveal shared and specific functions in the regulation of flowering and shade-avoidance pathways. BMC PLANT BIOLOGY 2016;16:141. [PMID: 27329140 PMCID: PMC4915087 DOI: 10.1186/s12870-016-0831-3] [Citation(s) in RCA: 43] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/01/2016] [Accepted: 06/15/2016] [Indexed: 05/21/2023]
28
Sanchez-Bermejo E, Balasubramanian S. Natural variation involving deletion alleles of FRIGIDA modulate temperature-sensitive flowering responses in Arabidopsis thaliana. PLANT, CELL & ENVIRONMENT 2016;39:1353-65. [PMID: 26662639 DOI: 10.1111/pce.12690] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/12/2015] [Revised: 11/28/2015] [Accepted: 11/29/2015] [Indexed: 05/12/2023]
29
Bergelson J, Buckler ES, Ecker JR, Nordborg M, Weigel D. A Proposal Regarding Best Practices for Validating the Identity of Genetic Stocks and the Effects of Genetic Variants. THE PLANT CELL 2016;28:606-9. [PMID: 26956491 PMCID: PMC4826003 DOI: 10.1105/tpc.15.00502] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/05/2015] [Accepted: 03/08/2016] [Indexed: 05/08/2023]
30
Huang H, Yoo CY, Bindbeutel R, Goldsworthy J, Tielking A, Alvarez S, Naldrett MJ, Evans BS, Chen M, Nusinow DA. PCH1 integrates circadian and light-signaling pathways to control photoperiod-responsive growth in Arabidopsis. eLife 2016;5:e13292. [PMID: 26839287 PMCID: PMC4755757 DOI: 10.7554/elife.13292] [Citation(s) in RCA: 74] [Impact Index Per Article: 8.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/24/2015] [Accepted: 01/13/2016] [Indexed: 01/06/2023]  Open
31
Huang H, Alvarez S, Bindbeutel R, Shen Z, Naldrett MJ, Evans BS, Briggs SP, Hicks LM, Kay SA, Nusinow DA. Identification of Evening Complex Associated Proteins in Arabidopsis by Affinity Purification and Mass Spectrometry. Mol Cell Proteomics 2016;15:201-217. [PMID: 26545401 DOI: 10.6019/pxd002606] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2015] [Indexed: 05/21/2023]  Open
32
Kaiserli E, Páldi K, O'Donnell L, Batalov O, Pedmale UV, Nusinow DA, Kay SA, Chory J. Integration of Light and Photoperiodic Signaling in Transcriptional Nuclear Foci. Dev Cell 2015;35:311-21. [PMID: 26555051 PMCID: PMC4654455 DOI: 10.1016/j.devcel.2015.10.008] [Citation(s) in RCA: 75] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/19/2015] [Revised: 08/08/2015] [Accepted: 10/09/2015] [Indexed: 10/22/2022]
33
Huang H, Alvarez S, Bindbeutel R, Shen Z, Naldrett MJ, Evans BS, Briggs SP, Hicks LM, Kay SA, Nusinow DA. Identification of Evening Complex Associated Proteins in Arabidopsis by Affinity Purification and Mass Spectrometry. Mol Cell Proteomics 2015;15:201-17. [PMID: 26545401 PMCID: PMC4762519 DOI: 10.1074/mcp.m115.054064] [Citation(s) in RCA: 133] [Impact Index Per Article: 13.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2015] [Indexed: 11/30/2022]  Open
34
Sun W, Xu XH, Wu X, Wang Y, Lu X, Sun H, Xie X. Genome-wide identification of microRNAs and their targets in wild type and phyB mutant provides a key link between microRNAs and the phyB-mediated light signaling pathway in rice. FRONTIERS IN PLANT SCIENCE 2015;6:372. [PMID: 26074936 PMCID: PMC4448008 DOI: 10.3389/fpls.2015.00372] [Citation(s) in RCA: 32] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/26/2015] [Accepted: 05/11/2015] [Indexed: 05/20/2023]
35
Shim JS, Imaizumi T. Circadian clock and photoperiodic response in Arabidopsis: from seasonal flowering to redox homeostasis. Biochemistry 2014;54:157-70. [PMID: 25346271 PMCID: PMC4303289 DOI: 10.1021/bi500922q] [Citation(s) in RCA: 65] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
36
Chao DY, Baraniecka P, Danku J, Koprivova A, Lahner B, Luo H, Yakubova E, Dilkes B, Kopriva S, Salt DE. Variation in sulfur and selenium accumulation is controlled by naturally occurring isoforms of the key sulfur assimilation enzyme ADENOSINE 5'-PHOSPHOSULFATE REDUCTASE2 across the Arabidopsis species range. PLANT PHYSIOLOGY 2014;166:1593-608. [PMID: 25245030 PMCID: PMC4226352 DOI: 10.1104/pp.114.247825] [Citation(s) in RCA: 38] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/02/2023]
37
Kohli D, Joshi G, Deokar AA, Bhardwaj AR, Agarwal M, Katiyar-Agarwal S, Srinivasan R, Jain PK. Identification and characterization of Wilt and salt stress-responsive microRNAs in chickpea through high-throughput sequencing. PLoS One 2014;9:e108851. [PMID: 25295754 PMCID: PMC4190074 DOI: 10.1371/journal.pone.0108851] [Citation(s) in RCA: 56] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/29/2014] [Accepted: 08/25/2014] [Indexed: 11/19/2022]  Open
38
Ihnatowicz A, Siwinska J, Meharg AA, Carey M, Koornneef M, Reymond M. Conserved histidine of metal transporter AtNRAMP1 is crucial for optimal plant growth under manganese deficiency at chilling temperatures. THE NEW PHYTOLOGIST 2014;202:1173-1183. [PMID: 24571269 DOI: 10.1111/nph.12737] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/03/2013] [Accepted: 01/10/2014] [Indexed: 05/05/2023]
39
Joosen RVL, Arends D, Li Y, Willems LA, Keurentjes JJ, Ligterink W, Jansen RC, Hilhorst HW. Identifying genotype-by-environment interactions in the metabolism of germinating arabidopsis seeds using generalized genetical genomics. PLANT PHYSIOLOGY 2013;162:553-66. [PMID: 23606598 PMCID: PMC3668052 DOI: 10.1104/pp.113.216176] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/08/2013] [Accepted: 04/17/2013] [Indexed: 05/18/2023]
40
Kasulin L, Agrofoglio Y, Botto JF. The receptor-like kinase ERECTA contributes to the shade-avoidance syndrome in a background-dependent manner. ANNALS OF BOTANY 2013;111:811-9. [PMID: 23444123 PMCID: PMC3631326 DOI: 10.1093/aob/mct038] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/03/2012] [Accepted: 01/10/2013] [Indexed: 05/19/2023]
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Tisné S, Serrand Y, Bach L, Gilbault E, Ben Ameur R, Balasse H, Voisin R, Bouchez D, Durand-Tardif M, Guerche P, Chareyron G, Da Rugna J, Camilleri C, Loudet O. Phenoscope: an automated large-scale phenotyping platform offering high spatial homogeneity. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2013;74:534-44. [PMID: 23452317 DOI: 10.1111/tpj.12131] [Citation(s) in RCA: 93] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/03/2012] [Revised: 01/24/2013] [Accepted: 01/25/2013] [Indexed: 05/20/2023]
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Li B, Duan H, Li J, Deng XW, Yin W, Xia X. Global identification of miRNAs and targets in Populus euphratica under salt stress. PLANT MOLECULAR BIOLOGY 2013;81:525-39. [PMID: 23430564 DOI: 10.1007/s11103-013-0010-y] [Citation(s) in RCA: 41] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/30/2012] [Accepted: 01/10/2013] [Indexed: 05/04/2023]
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An overview of natural variation studies in the Arabidopsis thaliana circadian clock. Semin Cell Dev Biol 2013;24:422-9. [PMID: 23558216 DOI: 10.1016/j.semcdb.2013.03.006] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/08/2013] [Revised: 03/18/2013] [Accepted: 03/19/2013] [Indexed: 01/20/2023]
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Jasinski S, Lécureuil A, Miquel M, Loudet O, Raffaele S, Froissard M, Guerche P. Natural variation in seed very long chain fatty acid content is controlled by a new isoform of KCS18 in Arabidopsis thaliana. PLoS One 2012;7:e49261. [PMID: 23145136 PMCID: PMC3493540 DOI: 10.1371/journal.pone.0049261] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2012] [Accepted: 10/05/2012] [Indexed: 12/30/2022]  Open
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Beeckman T, Friml J. Plant developmental biologists meet on stairways in Matera. Development 2012;139:3677-82. [DOI: 10.1242/dev.080861] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
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Farré EM. The regulation of plant growth by the circadian clock. PLANT BIOLOGY (STUTTGART, GERMANY) 2012;14:401-10. [PMID: 22284304 DOI: 10.1111/j.1438-8677.2011.00548.x] [Citation(s) in RCA: 55] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
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Simon M, Simon A, Martins F, Botran L, Tisné S, Granier F, Loudet O, Camilleri C. DNA fingerprinting and new tools for fine-scale discrimination of Arabidopsis thaliana accessions. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2012;69:1094-1101. [PMID: 22077701 DOI: 10.1111/j.1365-313x.2011.04852.x] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
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Joosen RVL, Arends D, Willems LAJ, Ligterink W, Jansen RC, Hilhorst HW. Visualizing the genetic landscape of Arabidopsis seed performance. PLANT PHYSIOLOGY 2012;158:570-89. [PMID: 22158761 PMCID: PMC3271751 DOI: 10.1104/pp.111.186676] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/06/2011] [Accepted: 12/11/2011] [Indexed: 05/18/2023]
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Weigel D. Natural variation in Arabidopsis: from molecular genetics to ecological genomics. PLANT PHYSIOLOGY 2012;158:2-22. [PMID: 22147517 PMCID: PMC3252104 DOI: 10.1104/pp.111.189845] [Citation(s) in RCA: 242] [Impact Index Per Article: 18.6] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/24/2011] [Accepted: 12/05/2011] [Indexed: 05/18/2023]
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Coudert Y, Bès M, Le TVA, Pré M, Guiderdoni E, Gantet P. Transcript profiling of crown rootless1 mutant stem base reveals new elements associated with crown root development in rice. BMC Genomics 2011;12:387. [PMID: 21806801 PMCID: PMC3163228 DOI: 10.1186/1471-2164-12-387] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/02/2010] [Accepted: 08/01/2011] [Indexed: 12/17/2022]  Open
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