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For: Newman JR, Wolf E, Kim PS. A computationally directed screen identifying interacting coiled coils from Saccharomyces cerevisiae. Proc Natl Acad Sci U S A 2000;97:13203-8. [PMID: 11087867 PMCID: PMC27203 DOI: 10.1073/pnas.97.24.13203] [Citation(s) in RCA: 128] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open

Supplementary Information

The online version contains supplementary material available at 10.1186/s12964-021-00718-x.

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Number Cited by Other Article(s)
1
Shah S, Mittal P, Kumar D, Mittal A, Ghosh SK. Evidence of kinesin motors involved in stable kinetochore assembly during early meiosis. Mol Biol Cell 2023;34:ar107. [PMID: 37556230 PMCID: PMC10559306 DOI: 10.1091/mbc.e22-12-0569] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/03/2023] [Revised: 07/27/2023] [Accepted: 08/02/2023] [Indexed: 08/11/2023]  Open
2
Woolfson DN. Understanding a protein fold: the physics, chemistry, and biology of α-helical coiled coils. J Biol Chem 2023;299:104579. [PMID: 36871758 PMCID: PMC10124910 DOI: 10.1016/j.jbc.2023.104579] [Citation(s) in RCA: 44] [Impact Index Per Article: 22.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/03/2023] [Revised: 02/25/2023] [Accepted: 02/27/2023] [Indexed: 03/07/2023]  Open
3
Mehta G, Sanyal K, Abhishek S, Rajakumara E, Ghosh SK. Minichromosome maintenance proteins in eukaryotic chromosome segregation. Bioessays 2021;44:e2100218. [PMID: 34841543 DOI: 10.1002/bies.202100218] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2021] [Revised: 11/05/2021] [Accepted: 11/08/2021] [Indexed: 01/02/2023]
4
Dünkler A, Leda M, Kromer JM, Neller J, Gronemeyer T, Goryachev AB, Johnsson N. Type V myosin focuses the polarisome and shapes the tip of yeast cells. J Cell Biol 2021;220:211845. [PMID: 33656555 PMCID: PMC7933982 DOI: 10.1083/jcb.202006193] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2020] [Revised: 01/25/2021] [Accepted: 02/04/2021] [Indexed: 11/22/2022]  Open
5
Shao H, Huang W, Avilan L, Receveur-Bréchot V, Puppo C, Puppo R, Lebrun R, Gontero B, Launay H. A new type of flexible CP12 protein in the marine diatom Thalassiosira pseudonana. Cell Commun Signal 2021;19:38. [PMID: 33761918 PMCID: PMC7992989 DOI: 10.1186/s12964-021-00718-x] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2020] [Accepted: 02/09/2021] [Indexed: 12/11/2022]  Open

Video Abstract

  • Hui Shao
    • CNRS, BIP UMR 7281, Aix Marseille Univ, 31 Chemin Joseph Aiguier, 13402, Marseille Cedex 20, France
  • Wenmin Huang
    • CNRS, BIP UMR 7281, Aix Marseille Univ, 31 Chemin Joseph Aiguier, 13402, Marseille Cedex 20, France.,Key Laboratory of Aquatic Botany and Watershed Ecology, Wuhan Botanical Garden, Center of Plant Ecology, Core Botanical Gardens, Chinese Academy of Sciences, Wuhan, 430074, China
  • Luisana Avilan
    • CNRS, BIP UMR 7281, Aix Marseille Univ, 31 Chemin Joseph Aiguier, 13402, Marseille Cedex 20, France.,Centre for Enzyme Innovation, School of Biological Sciences, Institute of Biological and Biomedical Sciences, University of Portsmouth, Portsmouth, PO1 2DY, UK
  • Carine Puppo
    • CNRS, BIP UMR 7281, Aix Marseille Univ, 31 Chemin Joseph Aiguier, 13402, Marseille Cedex 20, France
  • Rémy Puppo
    • CNRS FR 3479, Plate-Forme Protéomique de L'Institut de Microbiologie de La Méditerranée (IMM), Aix Marseille Univ, 13009, Marseille, France
  • Régine Lebrun
    • CNRS FR 3479, Plate-Forme Protéomique de L'Institut de Microbiologie de La Méditerranée (IMM), Aix Marseille Univ, 13009, Marseille, France
  • Brigitte Gontero
    • CNRS, BIP UMR 7281, Aix Marseille Univ, 31 Chemin Joseph Aiguier, 13402, Marseille Cedex 20, France.
  • Hélène Launay
    • CNRS, BIP UMR 7281, Aix Marseille Univ, 31 Chemin Joseph Aiguier, 13402, Marseille Cedex 20, France.
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6
King BR, Meehl JB, Vojnar T, Winey M, Muller EG, Davis TN. Microtubule-associated proteins and motors required for ectopic microtubule array formation in Saccharomyces cerevisiae. Genetics 2021;218:6180076. [PMID: 33752231 DOI: 10.1093/genetics/iyab050] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/08/2021] [Accepted: 03/04/2021] [Indexed: 12/17/2022]  Open
7
Ji ZL, Yu MH, Ding YY, Li J, Zhu F, He JX, Yang LN. Coiled-Coil N21 of Hpa1 in Xanthomonas oryzae pv. oryzae Promotes Plant Growth, Disease Resistance and Drought Tolerance in Non-Hosts via Eliciting HR and Regulation of Multiple Defense Response Genes. Int J Mol Sci 2020;22:E203. [PMID: 33379173 PMCID: PMC7795061 DOI: 10.3390/ijms22010203] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2020] [Revised: 12/23/2020] [Accepted: 12/24/2020] [Indexed: 12/18/2022]  Open
8
Aurin MB, Haupt M, Görlach M, Rümpler F, Theißen G. Structural Requirements of the Phytoplasma Effector Protein SAP54 for Causing Homeotic Transformation of Floral Organs. MOLECULAR PLANT-MICROBE INTERACTIONS : MPMI 2020;33:1129-1141. [PMID: 32689871 DOI: 10.1094/mpmi-02-20-0028-r] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
9
Mattiazzi Usaj M, Sahin N, Friesen H, Pons C, Usaj M, Masinas MPD, Shuteriqi E, Shkurin A, Aloy P, Morris Q, Boone C, Andrews BJ. Systematic genetics and single-cell imaging reveal widespread morphological pleiotropy and cell-to-cell variability. Mol Syst Biol 2020;16:e9243. [PMID: 32064787 PMCID: PMC7025093 DOI: 10.15252/msb.20199243] [Citation(s) in RCA: 31] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/18/2019] [Revised: 12/16/2019] [Accepted: 01/15/2020] [Indexed: 12/13/2022]  Open
10
Wang LI, Das A, McKim KS. Sister centromere fusion during meiosis I depends on maintaining cohesins and destabilizing microtubule attachments. PLoS Genet 2019;15:e1008072. [PMID: 31150390 PMCID: PMC6581285 DOI: 10.1371/journal.pgen.1008072] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2019] [Revised: 06/18/2019] [Accepted: 05/16/2019] [Indexed: 11/26/2022]  Open
11
Evidence of Zip1 Promoting Sister Kinetochore Mono-orientation During Meiosis in Budding Yeast. G3-GENES GENOMES GENETICS 2018;8:3691-3701. [PMID: 30254179 PMCID: PMC6222564 DOI: 10.1534/g3.118.200469] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
12
Preisner H, Habicht J, Garg SG, Gould SB. Intermediate filament protein evolution and protists. Cytoskeleton (Hoboken) 2018;75:231-243. [PMID: 29573204 DOI: 10.1002/cm.21443] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/24/2018] [Revised: 03/02/2018] [Accepted: 03/12/2018] [Indexed: 01/20/2023]
13
Zhang W, Yeung CHL, Wu L, Yuen KWY. E3 ubiquitin ligase Bre1 couples sister chromatid cohesion establishment to DNA replication in Saccharomyces cerevisiae. eLife 2017;6:28231. [PMID: 29058668 PMCID: PMC5699866 DOI: 10.7554/elife.28231] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2017] [Accepted: 10/22/2017] [Indexed: 12/12/2022]  Open
14
Zhang W, Yeung CHL, Wu L, Yuen KWY. E3 ubiquitin ligase Bre1 couples sister chromatid cohesion establishment to DNA replication in Saccharomyces cerevisiae. eLife 2017;6:28231. [PMID: 29058668 DOI: 10.7554/elife.28231.020] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2017] [Accepted: 10/22/2017] [Indexed: 05/25/2023]  Open
15
Regulating the construction and demolition of the synaptonemal complex. Nat Struct Mol Biol 2017;23:369-77. [PMID: 27142324 DOI: 10.1038/nsmb.3208] [Citation(s) in RCA: 161] [Impact Index Per Article: 20.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2015] [Accepted: 03/18/2016] [Indexed: 01/11/2023]
16
Dewangan PS, Sonawane PJ, Chouksey AR, Chauhan R. The Nup62 Coiled-Coil Motif Provides Plasticity for Triple-Helix Bundle Formation. Biochemistry 2017;56:2803-2811. [PMID: 28406021 DOI: 10.1021/acs.biochem.6b01050] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
17
Hierarchical cascades of instability govern the mechanics of coiled coils: helix unfolding precedes coil unzipping. Biophys J 2015;107:477-484. [PMID: 25028889 DOI: 10.1016/j.bpj.2014.06.009] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2014] [Revised: 05/13/2014] [Accepted: 06/03/2014] [Indexed: 12/31/2022]  Open
18
A yeast two-hybrid approach for probing protein-protein interactions at the centrosome. Methods Cell Biol 2015;129:251-277. [PMID: 26175443 DOI: 10.1016/bs.mcb.2015.03.012] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/05/2022]
19
Chao JT, Wong AKO, Tavassoli S, Young BP, Chruscicki A, Fang NN, Howe LJ, Mayor T, Foster LJ, Loewen CJR. Polarization of the endoplasmic reticulum by ER-septin tethering. Cell 2015;158:620-32. [PMID: 25083872 DOI: 10.1016/j.cell.2014.06.033] [Citation(s) in RCA: 87] [Impact Index Per Article: 8.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/06/2014] [Revised: 05/16/2014] [Accepted: 06/19/2014] [Indexed: 01/08/2023]
20
Melzer R, Härter A, Rümpler F, Kim S, Soltis PS, Soltis DE, Theißen G. DEF- and GLO-like proteins may have lost most of their interaction partners during angiosperm evolution. ANNALS OF BOTANY 2014;114:1431-43. [PMID: 24902716 PMCID: PMC4204782 DOI: 10.1093/aob/mcu094] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/03/2013] [Accepted: 03/28/2014] [Indexed: 05/20/2023]
21
Roberts AJ, Goodman BS, Reck-Peterson SL. Reconstitution of dynein transport to the microtubule plus end by kinesin. eLife 2014;3:e02641. [PMID: 24916158 PMCID: PMC4046564 DOI: 10.7554/elife.02641] [Citation(s) in RCA: 81] [Impact Index Per Article: 7.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]  Open
22
Corolla is a novel protein that contributes to the architecture of the synaptonemal complex of Drosophila. Genetics 2014;198:219-28. [PMID: 24913682 PMCID: PMC4174934 DOI: 10.1534/genetics.114.165290] [Citation(s) in RCA: 43] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]  Open
23
Chen DH, Huang Y, Liu C, Ruan Y, Shen WH. Functional conservation and divergence of J-domain-containing ZUO1/ZRF orthologs throughout evolution. PLANTA 2014;239:1159-1173. [PMID: 24659052 DOI: 10.1007/s00425-014-2058-6] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/18/2013] [Accepted: 03/05/2014] [Indexed: 06/03/2023]
24
Tuerxun H, Zhang Y, Ji F, Aili A, Yang X, Ding Y. Application of two-dimensional electrophoresis and mass spectrometry to screen endometriosis-related proteins. Mol Med Rep 2014;10:95-100. [PMID: 24737119 DOI: 10.3892/mmr.2014.2142] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2013] [Accepted: 01/14/2014] [Indexed: 11/06/2022]  Open
25
Mehta GD, Agarwal M, Ghosh SK. Functional characterization of kinetochore protein, Ctf19 in meiosis I: an implication of differential impact of Ctf19 on the assembly of mitotic and meiotic kinetochores in Saccharomyces cerevisiae. Mol Microbiol 2014;91:1179-99. [PMID: 24446862 DOI: 10.1111/mmi.12527] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 01/20/2014] [Indexed: 11/29/2022]
26
Grigoriev A. Understanding the yeast proteome: a bioinformatics perspective. Expert Rev Proteomics 2014;1:193-205. [PMID: 15966814 DOI: 10.1586/14789450.1.2.193] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
27
The anaphase promoting complex regulates yeast lifespan and rDNA stability by targeting Fob1 for degradation. Genetics 2013;196:693-709. [PMID: 24361936 DOI: 10.1534/genetics.113.158949] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]  Open
28
Whitworth K, Bradford MK, Camara N, Wendland B. Targeted disruption of an EH-domain protein endocytic complex, Pan1-End3. Traffic 2013;15:43-59. [PMID: 24118836 DOI: 10.1111/tra.12125] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2012] [Revised: 09/23/2013] [Accepted: 09/30/2013] [Indexed: 02/04/2023]
29
Chong A, Child R, Wehrly TD, Rockx-Brouwer D, Qin A, Mann BJ, Celli J. Structure-Function Analysis of DipA, a Francisella tularensis Virulence Factor Required for Intracellular Replication. PLoS One 2013;8:e67965. [PMID: 23840797 PMCID: PMC3694160 DOI: 10.1371/journal.pone.0067965] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/05/2013] [Accepted: 05/23/2013] [Indexed: 12/26/2022]  Open
30
Richmond D, Rizkallah R, Liang F, Hurt MM, Wang Y. Slk19 clusters kinetochores and facilitates chromosome bipolar attachment. Mol Biol Cell 2013;24:566-77. [PMID: 23283988 PMCID: PMC3583661 DOI: 10.1091/mbc.e12-07-0552] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]  Open
31
Wang Y, Zhang X, Zhang H, Lu Y, Huang H, Dong X, Chen J, Dong J, Yang X, Hang H, Jiang T. Coiled-coil networking shapes cell molecular machinery. Mol Biol Cell 2012;23:3911-22. [PMID: 22875988 PMCID: PMC3459866 DOI: 10.1091/mbc.e12-05-0396] [Citation(s) in RCA: 52] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]  Open
32
Rezvani K, Baalman K, Teng Y, Mee MP, Dawson SP, Wang H, De Biasi M, Mayer RJ. Proteasomal degradation of the metabotropic glutamate receptor 1α is mediated by Homer-3 via the proteasomal S8 ATPase: Signal transduction and synaptic transmission. J Neurochem 2012;122:24-37. [PMID: 22486777 DOI: 10.1111/j.1471-4159.2012.07752.x] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
33
James K, Wipat A, Hallinan J. Is newer better?--evaluating the effects of data curation on integrated analyses in Saccharomyces cerevisiae. Integr Biol (Camb) 2012;4:715-27. [PMID: 22526920 DOI: 10.1039/c2ib00123c] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
34
Jin F, Liu H, Li P, Yu HG, Wang Y. Loss of function of the Cik1/Kar3 motor complex results in chromosomes with syntelic attachment that are sensed by the tension checkpoint. PLoS Genet 2012;8:e1002492. [PMID: 22319456 PMCID: PMC3271067 DOI: 10.1371/journal.pgen.1002492] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/09/2011] [Accepted: 12/06/2011] [Indexed: 11/24/2022]  Open
35
Ji Z, Song C, Lu X, Wang J. Two coiled-coil regions of Xanthomonas oryzae pv. oryzae harpin differ in oligomerization and hypersensitive response induction. Amino Acids 2011;40:381-92. [PMID: 20532949 DOI: 10.1007/s00726-010-0643-y] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/25/2010] [Accepted: 05/27/2010] [Indexed: 12/31/2022]
36
Schreiber G, Keating AE. Protein binding specificity versus promiscuity. Curr Opin Struct Biol 2011;21:50-61. [PMID: 21071205 PMCID: PMC3053118 DOI: 10.1016/j.sbi.2010.10.002] [Citation(s) in RCA: 190] [Impact Index Per Article: 13.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/18/2010] [Revised: 10/10/2010] [Accepted: 10/14/2010] [Indexed: 10/18/2022]
37
Rackham OJL, Madera M, Armstrong CT, Vincent TL, Woolfson DN, Gough J. The evolution and structure prediction of coiled coils across all genomes. J Mol Biol 2010;403:480-93. [PMID: 20813113 DOI: 10.1016/j.jmb.2010.08.032] [Citation(s) in RCA: 77] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2010] [Revised: 08/06/2010] [Accepted: 08/17/2010] [Indexed: 10/19/2022]
38
Lai F, Wu R, Wang J, Li C, Zou L, Lu Y, Liang C. Far3p domains involved in the interactions of Far proteins and pheromone-induced cell cycle arrest in budding yeast. FEMS Yeast Res 2010;11:72-9. [PMID: 20977626 DOI: 10.1111/j.1567-1364.2010.00691.x] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]  Open
39
Bardhan A. Complex regulation of sister kinetochore orientation in meiosis-I. J Biosci 2010;35:485-95. [PMID: 20826957 DOI: 10.1007/s12038-010-0053-z] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
40
Esposito C, Carullo P, Pedone E, Graziano G, Del Vecchio P, Berisio R. Dimerisation and structural integrity of Heparin Binding Hemagglutinin A from Mycobacterium tuberculosis: implications for bacterial agglutination. FEBS Lett 2010;584:1091-6. [PMID: 20178790 DOI: 10.1016/j.febslet.2010.02.044] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2010] [Revised: 02/12/2010] [Accepted: 02/16/2010] [Indexed: 11/19/2022]
41
A computationally guided protein-interaction screen uncovers coiled-coil interactions involved in vesicular trafficking. J Mol Biol 2009;392:228-41. [PMID: 19591838 DOI: 10.1016/j.jmb.2009.07.006] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/03/2009] [Revised: 06/15/2009] [Accepted: 07/02/2009] [Indexed: 11/21/2022]
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Chiang T, Scholtens D. A general pipeline for quality and statistical assessment of protein interaction data using R and Bioconductor. Nat Protoc 2009;4:535-46. [DOI: 10.1038/nprot.2009.26] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
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Gibson TA, Goldberg DS. Questioning the ubiquity of neofunctionalization. PLoS Comput Biol 2009;5:e1000252. [PMID: 19119408 PMCID: PMC2597716 DOI: 10.1371/journal.pcbi.1000252] [Citation(s) in RCA: 30] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2008] [Accepted: 11/12/2008] [Indexed: 11/19/2022]  Open
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Yamamura Y, Shim WB. The coiled-coil protein-binding motif in Fusarium verticillioides Fsr1 is essential for maize stalk rot virulence. MICROBIOLOGY-SGM 2008;154:1637-1645. [PMID: 18524918 DOI: 10.1099/mic.0.2008/016782-0] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
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Bachellier-Bassi S, Gadal O, Bourout G, Nehrbass U. Cell cycle-dependent kinetochore localization of condensin complex in Saccharomyces cerevisiae. J Struct Biol 2008;162:248-59. [PMID: 18296067 DOI: 10.1016/j.jsb.2008.01.002] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/04/2007] [Revised: 12/20/2007] [Accepted: 01/04/2008] [Indexed: 01/01/2023]
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Droit A, Hunter JM, Rouleau M, Ethier C, Picard-Cloutier A, Bourgais D, Poirier GG. PARPs database: a LIMS systems for protein-protein interaction data mining or laboratory information management system. BMC Bioinformatics 2007;8:483. [PMID: 18093328 PMCID: PMC2266781 DOI: 10.1186/1471-2105-8-483] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2007] [Accepted: 12/19/2007] [Indexed: 11/10/2022]  Open
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Lee I, Li Z, Marcotte EM. An improved, bias-reduced probabilistic functional gene network of baker's yeast, Saccharomyces cerevisiae. PLoS One 2007;2:e988. [PMID: 17912365 PMCID: PMC1991590 DOI: 10.1371/journal.pone.0000988] [Citation(s) in RCA: 162] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2007] [Accepted: 09/10/2007] [Indexed: 11/18/2022]  Open
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Analysis of septins across kingdoms reveals orthology and new motifs. BMC Evol Biol 2007;7:103. [PMID: 17601340 PMCID: PMC1931588 DOI: 10.1186/1471-2148-7-103] [Citation(s) in RCA: 215] [Impact Index Per Article: 11.9] [Reference Citation Analysis] [Abstract] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/18/2006] [Accepted: 07/01/2007] [Indexed: 11/10/2022]  Open
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Barbara KE, Willis KA, Haley TM, Deminoff SJ, Santangelo GM. Coiled coil structures and transcription: an analysis of the S. cerevisiae coilome. Mol Genet Genomics 2007;278:135-47. [PMID: 17476531 DOI: 10.1007/s00438-007-0237-x] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/26/2007] [Accepted: 03/22/2007] [Indexed: 12/25/2022]
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Pei P, Zhang A. A topological measurement for weighted protein interaction network. PROCEEDINGS. IEEE COMPUTATIONAL SYSTEMS BIOINFORMATICS CONFERENCE 2007:268-78. [PMID: 16447984 DOI: 10.1109/csb.2005.8] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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