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Corallo AB, del Palacio A, Oliver M, Tiscornia S, Simoens M, Cea J, de Aurrecoechea I, Martínez I, Sanchez A, Stewart S, Pan D. Fusarium Species and Mycotoxins Associated with Sorghum Grains in Uruguay. Toxins (Basel) 2023; 15:484. [PMID: 37624241 PMCID: PMC10467058 DOI: 10.3390/toxins15080484] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2023] [Revised: 07/23/2023] [Accepted: 07/25/2023] [Indexed: 08/26/2023] Open
Abstract
Grain mold and stalk rot are among the fungal diseases that cause significant losses in sorghum worldwide and are caused by different Fusarium spp. The presence of Fusarium species in sorghum grains causes yield losses and mycotoxin contamination, which represents a risk to consumers. In this study, Fusarium graminearum species complex (FGSC) had a high incidence, followed by Fusarium fujikuroi species complex (FFSC) and F. incarnatum-equiseti species complex. Within FFSC, F. proliferatum, F. andiyazi, F. fujikuroi, F. thapsinum, F. verticillioides and F. subglutinans were identified, and this was the first report of F. fujikuroi in sorghum. The most frequent toxins found in sorghum samples were deoxynivalenol (DON) and zearalenone (ZEN). The presence of fumonisins and nivalenol (NIV) was detected at low levels. This study adds new knowledge about the occurrence of Fusarium species and mycotoxins in sorghum grains. Furthermore, this is the first report in Uruguay on fungicide sensitivity for Fusarium isolates from sorghum, which constitutes an important starting point for defining management practices to minimize fungal infection and mycotoxin contamination.
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Affiliation(s)
- Ana Belén Corallo
- Sección Micología, Facultad de CienciasFacultad de Ingeniería, UdelaR, Julio Herrera y Reissig 565, Montevideo 11300, Uruguay; (A.B.C.); (A.d.P.); (M.O.); (S.T.)
| | - Agustina del Palacio
- Sección Micología, Facultad de CienciasFacultad de Ingeniería, UdelaR, Julio Herrera y Reissig 565, Montevideo 11300, Uruguay; (A.B.C.); (A.d.P.); (M.O.); (S.T.)
| | - María Oliver
- Sección Micología, Facultad de CienciasFacultad de Ingeniería, UdelaR, Julio Herrera y Reissig 565, Montevideo 11300, Uruguay; (A.B.C.); (A.d.P.); (M.O.); (S.T.)
| | - Susana Tiscornia
- Sección Micología, Facultad de CienciasFacultad de Ingeniería, UdelaR, Julio Herrera y Reissig 565, Montevideo 11300, Uruguay; (A.B.C.); (A.d.P.); (M.O.); (S.T.)
| | - Macarena Simoens
- Laboratorio Tecnológico del Uruguay, Departamento de Análisis de Productos Agropecuarios, Avenida Italia 6201, Montevideo 11500, Uruguay; (M.S.); (J.C.)
| | - Jaqueline Cea
- Laboratorio Tecnológico del Uruguay, Departamento de Análisis de Productos Agropecuarios, Avenida Italia 6201, Montevideo 11500, Uruguay; (M.S.); (J.C.)
| | - Inés de Aurrecoechea
- Departamento de Granos, Dirección General de Servicios Agrícolas, Ministerio de Ganadería Agricultura y Pesca, Avenida Millán 4703, Montevideo 12900, Uruguay;
| | - Inés Martínez
- Latitud, Fundación del Laboratorio Tecnológico del Uruguay, Avenida Italia 6201, Montevideo 11500, Uruguay; (I.M.); (A.S.)
| | - Alicia Sanchez
- Latitud, Fundación del Laboratorio Tecnológico del Uruguay, Avenida Italia 6201, Montevideo 11500, Uruguay; (I.M.); (A.S.)
| | - Silvina Stewart
- Programa Cultivos de Secano, Instituto Nacional de Investigación Agropecuaria, Estación Experimental La Estanzuela, Ruta 50, Km 11, Colonia 70000, Uruguay;
| | - Dinorah Pan
- Sección Micología, Facultad de CienciasFacultad de Ingeniería, UdelaR, Julio Herrera y Reissig 565, Montevideo 11300, Uruguay; (A.B.C.); (A.d.P.); (M.O.); (S.T.)
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Han S, Wang M, Ma Z, Raza M, Zhao P, Liang J, Gao M, Li Y, Wang J, Hu D, Cai L. Fusarium diversity associated with diseased cereals in China, with an updated phylogenomic assessment of the genus. Stud Mycol 2023; 104:87-148. [PMID: 37351543 PMCID: PMC10282163 DOI: 10.3114/sim.2022.104.02] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/14/2022] [Accepted: 01/17/2023] [Indexed: 11/26/2023] Open
Abstract
Fusarium species are important cereal pathogens that cause severe production losses to major cereal crops such as maize, rice, and wheat. However, the causal agents of Fusarium diseases on cereals have not been well documented because of the difficulty in species identification and the debates surrounding generic and species concepts. In this study, we used a citizen science initiative to investigate diseased cereal crops (maize, rice, wheat) from 250 locations, covering the major cereal-growing regions in China. A total of 2 020 Fusarium strains were isolated from 315 diseased samples. Employing multi-locus phylogeny and morphological features, the above strains were identified to 43 species, including eight novel species that are described in this paper. A world checklist of cereal-associated Fusarium species is provided, with 39 and 52 new records updated for the world and China, respectively. Notably, 56 % of samples collected in this study were observed to have co-infections of more than one Fusarium species, and the detailed associations are discussed. Following Koch's postulates, 18 species were first confirmed as pathogens of maize stalk rot in this study. Furthermore, a high-confidence species tree was constructed in this study based on 1 001 homologous loci of 228 assembled genomes (40 genomes were sequenced and provided in this study), which supported the "narrow" generic concept of Fusarium (= Gibberella). This study represents one of the most comprehensive surveys of cereal Fusarium diseases to date. It significantly improves our understanding of the global diversity and distribution of cereal-associated Fusarium species, as well as largely clarifies the phylogenetic relationships within the genus. Taxonomic novelties: New species: Fusarium erosum S.L. Han, M.M. Wang & L. Cai, Fusarium fecundum S.L. Han, M.M. Wang & L. Cai, Fusarium jinanense S.L. Han, M.M. Wang & L. Cai, Fusarium mianyangense S.L. Han, M.M. Wang & L. Cai, Fusarium nothincarnatum S.L. Han, M.M. Wang & L. Cai, Fusarium planum S.L. Han, M.M. Wang & L. Cai, Fusarium sanyaense S.L. Han, M.M. Wang & L. Cai, Fusarium weifangense S.L. Han, M.M. Wang & L. Cai. Citation: Han SL, Wang MM, Ma ZY, Raza M, Zhao P, Liang JM, Gao M, Li YJ, Wang JW, Hu DM, Cai L (2023). Fusarium diversity associated with diseased cereals in China, with an updated phylogenomic assessment of the genus. Studies in Mycology 104: 87-148. doi: 10.3114/sim.2022.104.02.
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Affiliation(s)
- S.L. Han
- State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, P. R. China;
- College of Life Science, University of Chinese Academy of Sciences, Beijing 100049, P. R. China;
| | - M.M. Wang
- State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, P. R. China;
| | - Z.Y. Ma
- State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, P. R. China;
- College of Life Science, University of Chinese Academy of Sciences, Beijing 100049, P. R. China;
| | - M. Raza
- State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, P. R. China;
| | - P. Zhao
- State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, P. R. China;
| | - J.M. Liang
- State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, P. R. China;
| | - M. Gao
- State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, P. R. China;
- College of Life Science, University of Chinese Academy of Sciences, Beijing 100049, P. R. China;
| | - Y.J. Li
- State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, P. R. China;
- College of Life Science, University of Chinese Academy of Sciences, Beijing 100049, P. R. China;
| | - J.W. Wang
- Institute of Biology Co., Ltd., Henan Academy of Science, Zheng Zhou 450008, Henan, P. R. China;
| | - D.M. Hu
- College of Bioscience & Engineering, Jiangxi Agricultural University, Nanchang 330045, Jiangxi, P. R. China
| | - L. Cai
- State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, P. R. China;
- College of Life Science, University of Chinese Academy of Sciences, Beijing 100049, P. R. China;
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Bao Y, Akbar S, Yao W, Xu Y, Xu J, Powell CA, Chen B, Zhang M. Genetic Diversity and Pathogenicity of Fusarium fujikuroi Species Complex (FFSC) Causing Sugarcane Pokkah Boeng Disease (PBD) in China. PLANT DISEASE 2023:PDIS07221639SR. [PMID: 36410020 DOI: 10.1094/pdis-07-22-1639-sr] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/20/2023]
Abstract
Pokkah boeng disease (PBD), a sugarcane foliar disease, is caused by various Fusarium spp. within the Fusarium fujikuroi species complex (FFSC). In the current study, we investigated the diversity of Fusarium spp. associated with PBD in China. In total, 320 leaf samples displaying PBD symptoms were collected over 10 consecutive years (2012 to 2021), during winter and summer, from six various sugarcane-growing regions (Guangxi, Yunnan, Guangdong, Zhejiang, Hainan, and Fujian) in China. Phylogenetic analysis of Fusarium spp. was reconstructed using translation elongation factor 1-α, and DNA-directed RNA polymerase II largest subunit and second-largest subunit multigene sequences. Evolutionary studies of these regions categorized the isolates into four FFSC species (F. sacchari, F. proliferatum, F. verticillioides, and F. andiyazi). The identified isolates, which developed irregular necrotic patches and rotting symptoms on the sugarcane plant after approximately 30 days were tested for their pathogenicity. Symptoms that appeared during pathogenicity testing were consistent with those observed under field conditions. Each strain of the pathogenic Fusarium spp. belonged to different vegetative compatibility groups (VCGs), and there was no affinity between VCGs. Our results contribute to understanding FFSC and accurately identifying Fusarium spp. associated with the sugarcane crop.
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Affiliation(s)
- Yixue Bao
- State Key Lab for Conservation and Utilization of Subtropical Agric-Biological Resources & Guangxi Key Lab for Sugarcane Biology, Guangxi University, Nanning 530005, China
- Hainan Yazhou Bay Seed Laboratory, National Nanfan Research Institute (Sanya), Chinese Academy of Agricultural Sciences, Sanya 572024, China
- China/Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing 100081, China
| | - Sehrish Akbar
- State Key Lab for Conservation and Utilization of Subtropical Agric-Biological Resources & Guangxi Key Lab for Sugarcane Biology, Guangxi University, Nanning 530005, China
| | - Wei Yao
- State Key Lab for Conservation and Utilization of Subtropical Agric-Biological Resources & Guangxi Key Lab for Sugarcane Biology, Guangxi University, Nanning 530005, China
| | - Yuzhi Xu
- State Key Lab for Conservation and Utilization of Subtropical Agric-Biological Resources & Guangxi Key Lab for Sugarcane Biology, Guangxi University, Nanning 530005, China
| | - Jianlong Xu
- Hainan Yazhou Bay Seed Laboratory, National Nanfan Research Institute (Sanya), Chinese Academy of Agricultural Sciences, Sanya 572024, China
- China/Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing 100081, China
| | | | - Baoshan Chen
- State Key Lab for Conservation and Utilization of Subtropical Agric-Biological Resources & Guangxi Key Lab for Sugarcane Biology, Guangxi University, Nanning 530005, China
| | - Muqing Zhang
- State Key Lab for Conservation and Utilization of Subtropical Agric-Biological Resources & Guangxi Key Lab for Sugarcane Biology, Guangxi University, Nanning 530005, China
- IRREC-IFAS, University of Florida, Fort Pierce, FL 34945, U.S.A
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Félix-Gastélum R, Mora-Carlón BA, Leyva-Madrigal KY, Solano-Báez AR, Pérez-Mora JL, Guerra-Meza O, Mora-Romero GA. Sorghum Sheath Blight Caused by Fusarium spp. in Sinaloa, Mexico. PLANT DISEASE 2022; 106:1454-1461. [PMID: 34907807 DOI: 10.1094/pdis-10-21-2303-re] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
Sorghum (Sorghum bicolor) leaf sheath blight was observed for the first time in Sinaloa, Mexico in the summer of 2020. Fungal isolates were obtained from symptomatic tissue in potato dextrose agar. Fusarium spp. were associated with symptomatic plants in 10 sampling sites under field conditions. No root and stalk rot was observed during the sampling period. Analysis of fragments of the translation elongation factor alpha and RNA polymerase II second largest subunit genes indicated that all isolates belong to the Fusarium fujikuroi species complex (FFSC). Five groups were delineated from this complex: F. thapsinum, F. verticillioides, Fusarium sp. (four isolates), Fusarium sp. 4 (Fus4), and Fusarium sp. (Fus16), which is closely related to Fusarium madaense. The morphological characteristics (colony color and morphometry of conidia) of isolates with sequence similarities to those of F. thapsinum and F. verticillioides were in the expected range for these species. The morphology of isolates Fus7a, Fus7b, Fus11, and Fus17, as well as Fus4 and Fus16, were similar to those of the FFSC, specially to F. andiyazi and F. madaense. Inoculations of sorghum with representative isolates of F. thapsinum, F. verticillioides and the unidentified Fusarium species resulted in reddish brown lesions similar to those observed under field conditions; the original isolates inoculated were reisolated fulfilling the Koch's postulates. Although leaf sheaths on sorghum plants were heavily damaged, root and stalk rot were not observed in the greenhouse inoculations or under field conditions. Future research should focus on determining the identity of the unknown Fusarium spp. to design control measures for the disease. This is the first report of Fusarium spp. causing sorghum leaf sheath blight in Mexico.
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Affiliation(s)
- Rubén Félix-Gastélum
- Departamento de Ciencias Naturales y Exactas, Universidad Autónoma de Occidente, Los Mochis 81223, Sinaloa, México
| | - Bertha A Mora-Carlón
- Departamento de Ciencias Naturales y Exactas, Universidad Autónoma de Occidente, Los Mochis 81223, Sinaloa, México
| | - Karla Y Leyva-Madrigal
- Departamento de Ciencias Naturales y Exactas, Universidad Autónoma de Occidente, Los Mochis 81223, Sinaloa, México
| | - Alma R Solano-Báez
- Departamento de Ciencias Naturales y Exactas, Universidad Autónoma de Occidente, Los Mochis 81223, Sinaloa, México
| | - Juan L Pérez-Mora
- Unidad de Investigación en Ambiente and Salud, Universidad Autónoma de Occidente, Los Mochis 81223, Sinaloa, México
| | - Omar Guerra-Meza
- Unidad de Investigación en Ambiente and Salud, Universidad Autónoma de Occidente, Los Mochis 81223, Sinaloa, México
| | - Guadalupe A Mora-Romero
- Unidad de Investigación en Ambiente and Salud, Universidad Autónoma de Occidente, Los Mochis 81223, Sinaloa, México
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Ma YM, Zhu JZ, Li XG, Wang LL, Zhong J. Identification and First Report of Fusarium andiyazi Causing Sheath Rot of Zizania latifolia in China. PLANTS 2021; 10:plants10091844. [PMID: 34579377 PMCID: PMC8468070 DOI: 10.3390/plants10091844] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/22/2021] [Revised: 08/23/2021] [Accepted: 08/25/2021] [Indexed: 11/16/2022]
Abstract
Zizania latifolia is a perennial plant native to East Asia. The swollen culm of Z. latifolia is a popular vegetable and traditional herbal medicine consumed in China and some other Asian countries. From 2019 to 2021, a sheath rot disease was found in Zhejiang Province of China. Symptoms mainly occurred in the leaf sheath showing as brown necrotic lesions surrounded by yellow halos. The pathogen fungal isolates were isolated from the affected sheaths. Ten representative isolates were selected for morphological and molecular identification by phylogenetic analyses of the translation elongation factor 1-α (TEF1) and the RNA polymerase II subunit beta (RPB2) gene regions. Based on the combined datasets, the fungal isolates were identified as Fusarium andiyazi. Koch’s postulates were confirmed by pathogenicity test, re-isolation and re-identification of the fungal isolates. To the best of our knowledge, this is the first report of sheath rot caused by F. andiyazi in Z. latifolia in China.
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Affiliation(s)
- Ya-Min Ma
- Hunan Provincial Key Laboratory for Biology and Control of Plant Diseases and Insect Pests, Hunan Agricultural University, Nongda Road 1, Furong District, Changsha 410128, China; (Y.-M.M.); (J.-Z.Z.)
- Jinyun Plant Protective Station, Daqiao North Road 290, Lishui 321400, China
| | - Jun-Zi Zhu
- Hunan Provincial Key Laboratory for Biology and Control of Plant Diseases and Insect Pests, Hunan Agricultural University, Nongda Road 1, Furong District, Changsha 410128, China; (Y.-M.M.); (J.-Z.Z.)
| | - Xiao-Gang Li
- Hunan Engineering Research Center of Agricultural Pest Early Warning and Control, Hunan Agricultural University, Nongda Road 1, Changsha 410128, China
- Correspondence: (X.-G.L.); (L.-L.W.); (J.Z.)
| | - Lai-Liang Wang
- Lishui Institute of Agricultural and Forestry Sciences, Liyang Stress 827, Lishui 323000, China
- Correspondence: (X.-G.L.); (L.-L.W.); (J.Z.)
| | - Jie Zhong
- Hunan Provincial Key Laboratory for Biology and Control of Plant Diseases and Insect Pests, Hunan Agricultural University, Nongda Road 1, Furong District, Changsha 410128, China; (Y.-M.M.); (J.-Z.Z.)
- Correspondence: (X.-G.L.); (L.-L.W.); (J.Z.)
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Fumero MV, Yue W, Chiotta ML, Chulze SN, Leslie JF, Toomajian C. Divergence and Gene Flow Between Fusarium subglutinans and F. temperatum Isolated from Maize in Argentina. PHYTOPATHOLOGY 2021; 111:170-183. [PMID: 33079019 DOI: 10.1094/phyto-09-20-0434-fi] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
Fusarium subglutinans and F. temperatum are two important fungal pathogens of maize whose distinctness as separate species has been difficult to assess. We isolated strains of these species from commercial and native maize varieties in Argentina and sequenced >28,000 loci to estimate genetic variation in the sample. Our objectives were to measure genetic divergence between the species, infer demographic parameters related to their split, and describe the population structure of the sample. When analyzed together, over 30% of each species' polymorphic sites (>2,500 sites) segregate as polymorphisms in the other. Demographic modeling confirmed the species split predated maize domestication, but subsequent between-species gene flow has occurred, with gene flow from F. subglutinans into F. temperatum greater than gene flow in the reverse direction. In F. subglutinans, little evidence exists for substructure or recent selective sweeps, but there is evidence for limited sexual reproduction. In F. temperatum, there is clear evidence for population substructure and signals of abundant recent selective sweeps, with sexual reproduction probably less common than in F. subglutinans. Both genetic variation and the relative number of polymorphisms shared between species increase near the telomeres of all 12 chromosomes, where genes related to plant-pathogen interactions often are located. Our results suggest that species boundaries between closely related Fusarium species can be semipermeable and merit further study. Such semipermeability could facilitate unanticipated genetic exchange between species and enable quicker permanent responses to changes in the agro-ecosystem, e.g., pathogen-resistant host varieties, new chemical and biological control agents, and agronomic practices.
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Affiliation(s)
- M Veronica Fumero
- Research Institute on Mycology and Mycotoxicology (IMICO), National Scientific and Technical Research Council-National University of Río Cuarto (CONICET-UNRC), X5800, Río Cuarto, Córdoba, Argentina
| | - Wei Yue
- Department of Plant Pathology, Kansas State University, Manhattan, KS 66506, U.S.A
| | - María L Chiotta
- Research Institute on Mycology and Mycotoxicology (IMICO), National Scientific and Technical Research Council-National University of Río Cuarto (CONICET-UNRC), X5800, Río Cuarto, Córdoba, Argentina
| | - Sofía N Chulze
- Research Institute on Mycology and Mycotoxicology (IMICO), National Scientific and Technical Research Council-National University of Río Cuarto (CONICET-UNRC), X5800, Río Cuarto, Córdoba, Argentina
| | - John F Leslie
- Department of Plant Pathology, Kansas State University, Manhattan, KS 66506, U.S.A
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Jacquat AG, Theumer MG, Cañizares MC, Debat HJ, Iglesias J, García Pedrajas MD, Dambolena JS. A Survey of Mycoviral Infection in Fusarium spp. Isolated from Maize and Sorghum in Argentina Identifies the First Mycovirus from Fusarium verticillioides. Viruses 2020; 12:v12101161. [PMID: 33066620 PMCID: PMC7602464 DOI: 10.3390/v12101161] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/18/2020] [Revised: 09/28/2020] [Accepted: 10/09/2020] [Indexed: 12/30/2022] Open
Abstract
Mycoviruses appear to be widespread in Fusarium species worldwide. The aim of this work was to identify mycoviral infections in Fusarium spp., isolated from maize and sorghum grown in Argentina, and to estimate their potential effects on the pathogenicity and toxigenesis of the host fungus towards maize. Mycoviruses were identified in 2 out of 105 isolates analyzed; Fusarium verticillioides strain Sec505 and Fusarium andiyazi strain 162. They were characterized as members of the genus Mitovirus by high-throughput sequencing and sequence analysis. The F. verticillioides mitovirus was a novel mycovirus whereas the F. andiyazi mitovirus was found to be a new strain of a previously identified mitovirus. We have named these mitoviruses, Fusarium verticillioides mitovirus 1 (FvMV1) and Fusarium andiyazi mitovirus 1 strain 162 (FaMV1-162). To our knowledge, FvMV1 is the first mycovirus reported as naturally infecting F. verticillioides, the major causal agent of ear rot and fumonisin producer in corn. Both mitoviruses exhibited 100% vertical transmission rate to microconidia. The Fa162 strain infected with FaMV1-162 did not show phenotypic alterations. In contract, F. verticillioides Sec505 infected with FvMV1 showed increased virulence as well as microconidia and fumonisin-B1 production, compared with two uninfected strains. These results suggest that FvMV1 could have a role in modulating F. verticillioides pathogenicity and toxin production worth further exploring.
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Affiliation(s)
- Andrés Gustavo Jacquat
- Facultad de Ciencias Exactas Físicas y Naturales (FCEFyN), Universidad Nacional de Córdoba (UNC), Córdoba 5000, Argentina;
- Instituto Multidisciplinario de Biología Vegetal (IMBIV), Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Avenida Vélez Sarsfield 1611, Córdoba X5016GCA, Argentina
| | - Martín Gustavo Theumer
- Departamento de Bioquímica Clínica, Facultad de Ciencias Químicas (FCQ), Universidad Nacional de Córdoba (UNC), Córdoba 5000, Argentina;
- Centro de Investigaciones en Bioquímica Clínica e Inmunología (CIBICI), Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Haya de la Torre y Medina Allende—Ciudad Universitaria, Córdoba X5000HUA, Argentina
| | - María Carmen Cañizares
- Instituto de Hortofruticultura Subtropical y Mediterránea “La Mayora”, Universidad de Málaga, Consejo Superior de Investigaciones Científicas (IHSM—UMA—CSIC), Estación Experimental “La Mayora”, Avenida Dr. Wienberg s/n, 29750 Algarrobo-Costa, Málaga, Spain;
| | - Humberto Julio Debat
- Instituto de Patología Vegetal, Centro de Investigaciones Agropecuarias, Instituto Nacional de Tecnología Agropecuaria (IPAVE—CIAP—INTA), Camino 60 Cuadras Km 5.5, Córdoba X5020ICA, Argentina;
| | - Juliana Iglesias
- Estación Experimental Pergamino, (EEA) INTA Pergamino, Universidad Nacional Noroeste (UNNOBA), Pergamino (Buenos Aires) B2700, Argentina;
| | - María Dolores García Pedrajas
- Instituto de Hortofruticultura Subtropical y Mediterránea “La Mayora”, Universidad de Málaga, Consejo Superior de Investigaciones Científicas (IHSM—UMA—CSIC), Estación Experimental “La Mayora”, Avenida Dr. Wienberg s/n, 29750 Algarrobo-Costa, Málaga, Spain;
- Correspondence: (M.D.G.P.); (J.S.D.)
| | - José Sebastián Dambolena
- Facultad de Ciencias Exactas Físicas y Naturales (FCEFyN), Universidad Nacional de Córdoba (UNC), Córdoba 5000, Argentina;
- Instituto Multidisciplinario de Biología Vegetal (IMBIV), Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Avenida Vélez Sarsfield 1611, Córdoba X5016GCA, Argentina
- Correspondence: (M.D.G.P.); (J.S.D.)
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Qiu J, Lu Y, He D, Lee YW, Ji F, Xu J, Shi J. Fusarium fujikuroi Species Complex Associated With Rice, Maize, and Soybean From Jiangsu Province, China: Phylogenetic, Pathogenic, and Toxigenic Analysis. PLANT DISEASE 2020; 104:2193-2201. [PMID: 32552395 DOI: 10.1094/pdis-09-19-1909-re] [Citation(s) in RCA: 20] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/20/2023]
Abstract
Species belonging to the Fusarium fujikuroi species complex (FFSC) are of vital importance and are a major concern for food quantity and quality worldwide, as they not only cause serious diseases in crops but also produce various mycotoxins. To characterize the population structure and evaluate the risk of poisonous secondary metabolites, a total of 237 candidate strains were isolated from rice, maize, and soybean samples in Jiangsu Province, China. Species identification of the individual strain was accomplished by sequencing the translation elongation factor 1α gene (TEF-1α) and the fumonisin (FB) synthetic gene (FUM1). The distribution of Fusarium species among the different crops was observed. The maize seeds were dominated by F. proliferatum (teleomorph, Gibberella intermedia) and F. verticillioides (teleomorph, G. moniliformis), whereas F. fujikuroi (teleomorph, G. fujikuroi) was the most frequently isolated species from rice and soybean samples. In addition, phylogenetic analyses of these strains were performed, and the results suggested clear groups showing no obvious relationship with the origin source. FFSC species pathogenicity and toxigenicity were studied. All of the species reduced the rice seed germination rate, with no significant differences. F. fujikuroi showed two distinct patterns of influencing the length of rice seedlings, which were correlated with FBs and gibberellic acid synthesis. FBs were mainly produced by F. verticillioides and F. proliferatum. F. proliferatum and F. fujikuroi also produced moniliformin and beauvericin. The toxigenicity of F. andiyazi (teleomorph, G. andiyazi) was extremely low. Further analysis indicated that the sequence variations in TEF-1α and the differences in the expression levels of the toxin synthesis genes were associated with the diversity of secondary metabolites in F. fujikuroi strains. These findings provide insight into the population-level characterization of the FFSC and might be helpful in the development of strategies for the management of diseases and mycotoxins.
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Affiliation(s)
- Jianbo Qiu
- Jiangsu Key Laboratory for Food Quality and Safety - State Key Laboratory Cultivation Base, Ministry of Science and Technology; Key Laboratory for Control Technology and Standard for Agro-product Safety and Quality, Ministry of Agriculture and Rural Affairs; Collaborative Innovation Center for Modern Grain Circulation and Safety; and Institute of Food Safety and Nutrition, Jiangsu Academy of Agricultural Sciences, Nanjing 210014, China
| | - Yunan Lu
- College of Marine Life and Fisheries, Jiangsu Ocean University, Lianyungang 222005, China
| | - Dan He
- Jiangsu Key Laboratory for Food Quality and Safety - State Key Laboratory Cultivation Base, Ministry of Science and Technology; Key Laboratory for Control Technology and Standard for Agro-product Safety and Quality, Ministry of Agriculture and Rural Affairs; Collaborative Innovation Center for Modern Grain Circulation and Safety; and Institute of Food Safety and Nutrition, Jiangsu Academy of Agricultural Sciences, Nanjing 210014, China
| | - Yin-Won Lee
- Department of Agricultural Biotechnology, Seoul National University, Seoul 08826, Republic of Korea
| | - Fang Ji
- Jiangsu Key Laboratory for Food Quality and Safety - State Key Laboratory Cultivation Base, Ministry of Science and Technology; Key Laboratory for Control Technology and Standard for Agro-product Safety and Quality, Ministry of Agriculture and Rural Affairs; Collaborative Innovation Center for Modern Grain Circulation and Safety; and Institute of Food Safety and Nutrition, Jiangsu Academy of Agricultural Sciences, Nanjing 210014, China
- Microbiology Discipline, School of Life Sciences, University of KwaZulu-Natal, Westville Campus, Durban, South Africa
| | - Jianhong Xu
- Jiangsu Key Laboratory for Food Quality and Safety - State Key Laboratory Cultivation Base, Ministry of Science and Technology; Key Laboratory for Control Technology and Standard for Agro-product Safety and Quality, Ministry of Agriculture and Rural Affairs; Collaborative Innovation Center for Modern Grain Circulation and Safety; and Institute of Food Safety and Nutrition, Jiangsu Academy of Agricultural Sciences, Nanjing 210014, China
- School of Food and Biological Engineering, Jiangsu University, Zhenjiang 212013, China
| | - Jianrong Shi
- Jiangsu Key Laboratory for Food Quality and Safety - State Key Laboratory Cultivation Base, Ministry of Science and Technology; Key Laboratory for Control Technology and Standard for Agro-product Safety and Quality, Ministry of Agriculture and Rural Affairs; Collaborative Innovation Center for Modern Grain Circulation and Safety; and Institute of Food Safety and Nutrition, Jiangsu Academy of Agricultural Sciences, Nanjing 210014, China
- School of Food and Biological Engineering, Jiangsu University, Zhenjiang 212013, China
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Ezekiel CN, Kraak B, Sandoval-Denis M, Sulyok M, Oyedele OA, Ayeni KI, Makinde OM, Akinyemi OM, Krska R, Crous PW, Houbraken J. Diversity and toxigenicity of fungi and description of Fusarium madaense sp. nov. from cereals, legumes and soils in north-central Nigeria. MycoKeys 2020; 67:95-124. [PMID: 32565683 PMCID: PMC7295817 DOI: 10.3897/mycokeys.67.52716] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2020] [Accepted: 04/15/2020] [Indexed: 12/22/2022] Open
Abstract
Mycological investigation of various foods (mainly cowpea, groundnut, maize, rice, sorghum) and agricultural soils from two states in north-central Nigeria (Nasarawa and Niger), was conducted in order to understand the role of filamentous fungi in food contamination and public health. A total of 839 fungal isolates were recovered from 84% of the 250 food and all 30 soil samples. Preliminary identifications were made, based on macro- and micromorphological characters. Representative strains (n = 121) were studied in detail using morphology and DNA sequencing, involving genera/species-specific markers, while extrolite profiles using LC-MS/MS were obtained for a selection of strains. The representative strains grouped in seven genera (Aspergillus, Fusarium, Macrophomina, Meyerozyma, Neocosmospora, Neotestudina and Phoma). Amongst the 21 species that were isolated during this study was one novel species belonging to the Fusariumfujikuroi species complex, F.madaensesp. nov., obtained from groundnut and sorghum in Nasarawa state. The examined strains produced diverse extrolites, including several uncommon compounds: averantinmethylether in A.aflatoxiformans; aspergillimide in A.flavus; heptelidic acid in A.austwickii; desoxypaxillin, kotanin A and paspalitrems (A and B) in A.aflatoxiformans, A.austwickii and A.cerealis; aurasperon C, dimethylsulochrin, fellutanine A, methylorsellinic acid, nigragillin and pyrophen in A.brunneoviolaceus; cyclosporins (A, B, C and H) in A.niger; methylorsellinic acid, pyrophen and secalonic acid in A.piperis; aspulvinone E, fonsecin, kojic acid, kotanin A, malformin C, pyranonigrin and pyrophen in A.vadensis; and all compounds in F.madaense sp. nov., Meyerozyma, Neocosmospora and Neotestudina. This study provides snapshot data for prediction of food contamination and fungal biodiversity exploitation.
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Affiliation(s)
- Chibundu N Ezekiel
- Department of Microbiology, Babcock University, Ilishan Remo, Ogun State, Nigeria Babcock University Ilishan Remo Nigeria.,Institute of Bioanalytics and Agro-Metabolomics, Department of Agrobiotechnology (IFA-Tulln), University of Natural Resources and Life Sciences Vienna (BOKU), Konrad Lorenzstr. 20, A-3430 Tulln, Austria University of Natural Resources and Life Sciences Vienna Tulln Austria
| | - Bart Kraak
- Westerdijk Fungal Biodiversity Institute, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands Westerdijk Fungal Biodiversity Institute Utrecht Netherlands
| | - Marcelo Sandoval-Denis
- Westerdijk Fungal Biodiversity Institute, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands Westerdijk Fungal Biodiversity Institute Utrecht Netherlands
| | - Michael Sulyok
- Institute of Bioanalytics and Agro-Metabolomics, Department of Agrobiotechnology (IFA-Tulln), University of Natural Resources and Life Sciences Vienna (BOKU), Konrad Lorenzstr. 20, A-3430 Tulln, Austria University of Natural Resources and Life Sciences Vienna Tulln Austria
| | - Oluwawapelumi A Oyedele
- Department of Microbiology, Babcock University, Ilishan Remo, Ogun State, Nigeria Babcock University Ilishan Remo Nigeria
| | - Kolawole I Ayeni
- Department of Microbiology, Babcock University, Ilishan Remo, Ogun State, Nigeria Babcock University Ilishan Remo Nigeria
| | - Oluwadamilola M Makinde
- Department of Microbiology, Babcock University, Ilishan Remo, Ogun State, Nigeria Babcock University Ilishan Remo Nigeria
| | - Oluwatosin M Akinyemi
- Department of Microbiology, Babcock University, Ilishan Remo, Ogun State, Nigeria Babcock University Ilishan Remo Nigeria
| | - Rudolf Krska
- Institute of Bioanalytics and Agro-Metabolomics, Department of Agrobiotechnology (IFA-Tulln), University of Natural Resources and Life Sciences Vienna (BOKU), Konrad Lorenzstr. 20, A-3430 Tulln, Austria University of Natural Resources and Life Sciences Vienna Tulln Austria.,Institute for Global Food Security, School of Biological Sciences, Queen's University Belfast, University Road, Belfast, BT7 1NN, Northern Ireland, UK Queen's University Belfast Belfast United Kingdom
| | - Pedro W Crous
- Westerdijk Fungal Biodiversity Institute, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands Westerdijk Fungal Biodiversity Institute Utrecht Netherlands
| | - Jos Houbraken
- Westerdijk Fungal Biodiversity Institute, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands Westerdijk Fungal Biodiversity Institute Utrecht Netherlands
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Fusarium fujikuroi species complex in Brazilian rice: Unveiling increased phylogenetic diversity and toxigenic potential. Int J Food Microbiol 2020; 330:108667. [PMID: 32531666 DOI: 10.1016/j.ijfoodmicro.2020.108667] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/25/2019] [Revised: 05/11/2020] [Accepted: 05/17/2020] [Indexed: 11/20/2022]
Abstract
Fusarium fujikuroi species complex (FFSC) species are commonly encountered infecting rice, but knowledge of the diversity and toxigenic potential of the species is lacking in Brazil, the largest rice-producing country outside Asia. One hundred FFSC isolates obtained from national rice were identified using morphology and phylogeny of TEF, CAL and TUB genes. Eight previously known and one novel Fusarium species were identified. Three species accounted for around 60% of the strains: F. fujikuroi (n = 23), F. proliferatum (n = 22) and F. verticillioides (n = 16). The less frequent species were F. volatile (n = 8), F. anthophilum (n = 6), F. pseudocircinatum (n = 4), F. sterilihyphosum (n = 2) and F. begoniae (n = 1). The novel Fusarium species was represented by 18 isolates. All species produced at least one of the analyzed mycotoxins [beauvericin (BEA), fumonisins (FBs), moniliformin (MON) and enniatins (ENNs)]. BEA was produced by all species but F. verticillioides. The FBs (mainly FB1) were produced mostly by F. fujikuroi, F. proliferatum and F. verticillioides. F. begoniae and F. verticillioides did not produce ENNs and F. sterilihyphosum and F. begoniae did not produce MON, while the other species produced MON and ENNs. Our results add new knowledge of the diversity, geographical distribution and host range of FFSC species.
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Fusarium Secondary Metabolism Biosynthetic Pathways: So Close but So Far Away. REFERENCE SERIES IN PHYTOCHEMISTRY 2020. [DOI: 10.1007/978-3-319-96397-6_28] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
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Mohamed Nor NMI, Salleh B, Leslie JF. Fusarium Species from Sorghum in Thailand. THE PLANT PATHOLOGY JOURNAL 2019; 35:301-312. [PMID: 31481853 PMCID: PMC6706015 DOI: 10.5423/ppj.oa.03.2019.0049] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/05/2019] [Revised: 05/02/2019] [Accepted: 05/15/2019] [Indexed: 06/10/2023]
Abstract
Sorghum is the fifth most important cereal worldwide, spreading from Africa throughout the world. It is particularly important in the semi-arid tropics due to its drought tolerance, and when cultivated in Southeast Asia commonly occurs as a second crop during the dry season. We recovered Fusarium from sorghum in Thailand and found F. proliferatum, F. thapsinum and F. verticillioides most frequently, and intermittent isolates of F. sacchari and F. beomiforme. The relatively high frequencies of F. proliferatum and F. verticillioides, suggest mycotoxin contamination, particularly fumonisins and moniliformin, should be evaluated. Genetic variation within the three commonly recovered species was characterized with vegetative compatibility, mating type, Amplified Fragment Length Polymorphisms (AFLPs), and female fertility. Effective population number (N e ) was highest for F. verticillioides and lowest for F. thapsinum with values based on mating type allele frequencies higher than those based on female fertility. Based on AFLP genetic variation, the F. thapsinum populations were the most closely related, the F. verticillioides populations were the most distantly related, and the F. proliferatum populations were in an intermediate position. The genetic variation observed could result if F. thapsinum is introduced primarily with seed, while F. proliferatum and F. verticillioides could arrive with seed or be carried over from previous crops, e.g., rice or maize, which sorghum is following. Confirmation of species transmission patterns is needed to understand the agricultural systems in which sorghum is grown in Southeast Asia, which are quite different from the systems found in Africa, Australia, India and the Americas.
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Affiliation(s)
- Nik M. I. Mohamed Nor
- Department of Plant Pathology, Kansas State University, Manhattan, Kansas 66506,
USA
- School of Biological Science, Universiti Sains Malaysia, 11800 Pulau Pinang,
Malaysia
| | - Baharuddin Salleh
- School of Biological Science, Universiti Sains Malaysia, 11800 Pulau Pinang,
Malaysia
| | - John F. Leslie
- Department of Plant Pathology, Kansas State University, Manhattan, Kansas 66506,
USA
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Phylogenetically Diverse Fusarium Species Associated with Sorghum (Sorghum Bicolor L. Moench) and Finger Millet (Eleusine Coracana L. Garten) Grains from Ethiopia. DIVERSITY 2019. [DOI: 10.3390/d11060093] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
Fusarium is one of the most diverse fungal genera affecting several crops around the world. This study describes the phylogeny of Fusarium species associated with grains of sorghum and finger millet from different parts of Ethiopia. Forty-two sorghum and 34 finger millet grain samples were mycologically analysed. All of the sorghum and more than 40% of the finger millet grain samples were contaminated by the Fusarium species. The Fusarium load was higher in sorghum grains than that in finger millet grains. In addition, 67 test isolates were phylogenetically analysed using EF-1α and β-tubulin gene primers. Results revealed the presence of eight phylogenetic placements within the genus Fusarium, where 22 of the isolates showed a close phylogenetic relation to the F. incarnatum–equiseti species complex. Nevertheless, they possess a distinct shape of apical cells of macroconidia, justifying the presence of new species within the Fusarium genus. The new species was the most dominant, represented by 33% of the test isolates. The current work can be seen as an important addition to the knowledge of the biodiversity of fungal species that exists within the Fusarium genus. It also reports a previously unknown Fusarium species that needs to be investigated further for toxin production potential.
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Adeyanju A, Little C, Yu J, Tesso T. Genome-Wide Association Study on Resistance to Stalk Rot Diseases in Grain Sorghum. G3 (BETHESDA, MD.) 2015; 5:1165-75. [PMID: 25882062 PMCID: PMC4478546 DOI: 10.1534/g3.114.016394] [Citation(s) in RCA: 29] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/06/2015] [Accepted: 04/06/2015] [Indexed: 02/08/2023]
Abstract
Stalk rots are important biotic constraints to sorghum production worldwide. Several pathogens may be associated with the disease, but Macrophomina phaseolina and Fusarium thapsinum are recognized as the major causal organisms. The diseases become more aggressive when drought and high-temperature stress occur during grain filling. Progress in genetic improvement efforts has been slow due to lack of effective phenotyping protocol and the strong environmental effect on disease incidence and severity. Deployment of modern molecular tools is expected to accelerate efforts to develop resistant hybrids. This study was aimed at identifying genomic regions associated with resistance to both causal organisms. A sorghum diversity panel consisting of 300 genotypes assembled from different parts of the world was evaluated for response to infection by both pathogens. Community resources of 79,132 single nucleotide polymorphic (SNP) markers developed on the panel were used in association studies using a multi-locus mixed model to map loci associated with stalk rot resistance. Adequate genetic variation was observed for resistance to both pathogens. Structure analysis grouped the genotypes into five subpopulations primarily based on the racial category of the genotypes. Fourteen loci and a set of candidate genes appear to be involved in connected functions controlling plant defense response. However, each associated SNP had relatively small effect on the traits, accounting for 19-30% of phenotypic variation. Linkage disequilibrium analyses suggest that significant SNPs are genetically independent. Estimation of frequencies of associated alleles revealed that durra and caudatum subpopulations were enriched for resistant alleles, but the results suggest complex molecular mechanisms underlying resistance to both pathogens.
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Affiliation(s)
- Adedayo Adeyanju
- Department of Agronomy, Kansas State University, Manhattan, Kansas 66506
| | - Christopher Little
- Department of Plant Pathology, Kansas State University, Manhattan, Kansas 66506
| | - Jianming Yu
- Department of Agronomy, Iowa State University, Ames, Iowa 50011
| | - Tesfaye Tesso
- Department of Agronomy, Kansas State University, Manhattan, Kansas 66506
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15
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Zhu Z, Zheng L, Pan L, Hsiang T, Huang J. Identification and Characterization of Fusarium Species Associated with Wilt of Eleocharis dulcis (Chinese water chestnut) in China. PLANT DISEASE 2014; 98:977-987. [PMID: 30708844 DOI: 10.1094/pdis-08-13-0805-re] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
Fusarium wilt is one of the most important diseases of Eleocharis dulcis (Chinese water chestnut) in China. In order to characterize the pathogens responsible, 69 Fusarium isolates were collected from diseased plants in E. dulcis production areas of the Chinese provinces Anhui, Fujian, Hubei, Hunan, Jiangsu, and Zhejiang. These were then identified based on morphological and molecular characteristics. F. commune was the most common species (92.8%) and was widely distributed in the six provinces. A novel species within the Gibberella fujikuroi species complex (GFSC) was found in Hubei and Zhejiang provinces (5.8%), and an unidentified Fusarium sp. was found only in Hubei province (1.4%). Thirty F. commune isolates from different provinces and four GFSC isolates were selected for sequence analyses of the translation elongation factor 1-α (EF-1α), the mitochondrial small subunit (mtSSU) ribosomal DNA, and the nuclear ribosomal intergenic spacer region (IGS). Maximum parsimony and Bayesian analyses of the multilocus sequence data of these two species plus other taxa showed that the two species formed two distinct, well-supported clades among the three individual and combined gene genealogies. Isolates from different locations were scattered, with no evidence of geographic specialization. Pathogenicity assays showed that the two Fusarium spp., including the unidentified Fusarium sp., were pathogenic to E. dulcis 'Tuanfeng seven'. There was no relationship between the source of isolates and their pathogenicity. This is the first description of F. commune, a novel species within the GFSC, and an unidentified Fusarium sp. as causal agents of Fusarium wilt of E. dulcis in China.
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Affiliation(s)
- Zhixian Zhu
- The Key Lab of Plant Pathology of Hubei Province, Huazhong Agricultural University, Wuhan, 430070, China
| | - Lu Zheng
- The Key Lab of Plant Pathology of Hubei Province, Huazhong Agricultural University, Wuhan, 430070, China
| | - Li Pan
- The Key Lab of Plant Pathology of Hubei Province, Huazhong Agricultural University, Wuhan, 430070, China
| | - Tom Hsiang
- School of Environmental Sciences, University of Guelph, Guelph, ON N1G 2W1, Canada
| | - Junbin Huang
- The Key Lab of Plant Pathology of Hubei Province, Huazhong Agricultural University
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Prospects of molecular markers in Fusarium species diversity. Appl Microbiol Biotechnol 2011; 90:1625-39. [DOI: 10.1007/s00253-011-3209-3] [Citation(s) in RCA: 47] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/13/2011] [Revised: 02/17/2011] [Accepted: 02/17/2011] [Indexed: 11/26/2022]
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17
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da Silva VN, Fernandes FMC, Cortez A, Ribeiro DHB, de Almeida AP, Hassegawa RH, Corrêa B. Characterization and genetic variability ofFusarium verticillioidesstrains isolated from corn and sorghum in Brazil based on fumonisins production, microsatellites, mating type locus, and mating crosses. Can J Microbiol 2006; 52:798-804. [PMID: 16917539 DOI: 10.1139/w06-029] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Fusarium verticillioides (Gibberella fujikuroi mating population A) is a producer of fumonisins and one of the main contaminants of corn grains. In Brazil, some studies analyzing strains isolated from corn have demonstrated high levels of fumonisins, whereas the levels for strains isolated from sorghum have been found to be low. In the present study, we investigated the genetic diversity of 22 F. verticillioides strains isolated from corn and 21 strains isolated from sorghum cultivated in the State of São Paulo, Brazil. Differences in the genetic profile were observed between the strains isolated from the two substrates using single primer amplification reaction by polymerase chain reaction (SPAR-PCR). Fumonisins levels were higher in strains isolated from corn than in those isolated from sorghum. The MAT-1 and MAT-2 alleles were identified by PCR, and the isolates were subsequently crossed with Fusarium thapsinum (G. fujikuroi mating population F) reference strains because this species is morphologically similar to F. verticillioides and produces low levels of fumonisins. The SPAR haplotypes of some strains isolated from sorghum were similar to the F. thapsinum reference strain haplotypes, but there was no fertile mating between the strains isolated from the two substrates and the F. thapsinum references strains. The MAT-1:MAT-2 proportion was 5:17 and 14:7 for isolates from corn and sorghum, respectively.Key words: Fusarium verticillioides, fumonisins, single primer amplification reaction, mating types.
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Affiliation(s)
- Valéria Nascimento da Silva
- Departamento de Microbiologia, Instituto de Ciências Biomédicas, Universidade de São Paulo, SP, 05508-900, Brazil.
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Leslie JF, Zeller KA, Lamprecht SC, Rheeder JP, Marasas WFO. Toxicity, pathogenicity, and genetic differentiation of five species of fusarium from sorghum and millet. PHYTOPATHOLOGY 2005; 95:275-283. [PMID: 18943121 DOI: 10.1094/phyto-95-0275] [Citation(s) in RCA: 40] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/26/2023]
Abstract
ABSTRACT Fusarium isolates recovered from sorghum and millet are commonly identified as F. moniliforme, but with the recognition of new species in this group, the strains given this name are being re-evaluated. We analyzed five strains each from five Fusarium species (F. andiyazi, F. nygamai, F. pseudonygamai, F. thapsinum, and F. verticillioides) often associated with sorghum and millet for their ability to produce fumonisin and moniliformin, their toxicity to ducklings, and their ability to cause disease on sorghum seedlings in vitro. These species can be distinguished with isozymes (fumarase, NADP-dependent isocitrate dehydrogenase, and malate dehydrogenase) and with banding patterns resulting from amplified fragment length polymorphisms. Two species, F. pseudonygamai and F. thapsinum, produced high levels of moniliformin, but little or no fumonisins, and were consistently highly toxigenic in the duckling tests. Two species, F. verticillioides and F. nygamai, produced high levels of fumonisins, but little or no moniliformin, and also were toxigenic in the duckling tests. F. andiyazi produced little or no toxin and was the least toxigenic in the duckling tests. In sorghum seedling pathogenicity tests, F. thapsinum was the most virulent followed by F. andiyazi, then F. verticillioides, and finally F. nygamai and F. pseudonygamai, which were similar to each other. Thus, these five species, which would once have all been called F. moniliforme, differ sufficiently in terms of plant pathogenicity and toxin production profile, that their previous misidentification could explain inconsistencies in the literature and differences observed by researchers who thought they were all working with the same fungal species.
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Summerell BA, Salleh B, Leslie JF. A Utilitarian Approach to Fusarium Identification. PLANT DISEASE 2003; 87:117-128. [PMID: 30812915 DOI: 10.1094/pdis.2003.87.2.117] [Citation(s) in RCA: 71] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/18/2023]
Affiliation(s)
| | - Baharuddin Salleh
- School of Biological Sciences, Science University of Malaysia, Penang, Malaysia
| | - John F. Leslie
- Throckmorton Plant Sciences Center, Kansas State University, Manhattan
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Jurgenson JE, Bowden RL, Zeller KA, Leslie JF, Alexander NJ, Plattner RD. A genetic map of Gibberella zeae (Fusarium graminearum). Genetics 2002; 160:1451-60. [PMID: 11973300 PMCID: PMC1462054 DOI: 10.1093/genetics/160.4.1451] [Citation(s) in RCA: 100] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
We constructed a genetic linkage map of Gibberella zeae (Fusarium graminearum) by crossing complementary nitrate-nonutilizing (nit) mutants of G. zeae strains R-5470 (from Japan) and Z-3639 (from Kansas). We selected 99 nitrate-utilizing (recombinant) progeny and analyzed them for amplified fragment length polymorphisms (AFLPs). We used 34 pairs of two-base selective AFLP primers and identified 1048 polymorphic markers that mapped to 468 unique loci on nine linkage groups. The total map length is approximately 1300 cM with an average interval of 2.8 map units between loci. Three of the nine linkage groups contain regions in which there are high levels of segregation distortion. Selection for the nitrate-utilizing recombinant progeny can explain two of the three skewed regions. Two linkage groups have recombination patterns that are consistent with the presence of intercalary inversions. Loci governing trichothecene toxin amount and type (deoxynivalenol or nivalenol) map on linkage groups IV and I, respectively. The locus governing the type of trichothecene produced (nivalenol or deoxynivalenol) cosegregated with the TRI5 gene (which encodes trichodiene synthase) and probably maps in the trichothecene gene cluster. This linkage map will be useful in population genetic studies, in map-based cloning, for QTL (quantitative trait loci) analysis, for ordering genomic libraries, and for genomic comparisons of related species.
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Affiliation(s)
- J E Jurgenson
- Department of Biology, University of Northern Iowa, Cedar Falls, Iowa 50614, USA.
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