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Zhu X, Xiong C, Zhou H, Wang J, Wu Y. Single-atom nanozymes for enhanced electrochemical biosensing: A review. Talanta 2025; 294:128179. [PMID: 40286743 DOI: 10.1016/j.talanta.2025.128179] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/24/2025] [Revised: 03/30/2025] [Accepted: 04/17/2025] [Indexed: 04/29/2025]
Abstract
Enzyme-based electrochemical biosensors have broad and significant applications in biomedical, environmental monitoring, and food safety fields. However, the application of natural enzymes is limited due to issues such as poor stability, complex preparation, and high cost. Single-atom nanozymes (SAzymes), with their unique catalytic properties and efficient enzyme-like activities, present a promising alternative in the field of electrochemical biosensing. Compared to traditional enzymes, SAzyme offer enhanced stability and controllability, making them particularly effective in complex detection environments. This work presents the first systematic review of the progress made since 2018 in the use of SAzymes as alternatives to natural enzymes in electrochemical biosensors, and presents the latest advancements in this area. The review begins with a discussion of various enzyme-like activities of single-atom materials, including peroxidase (POD)-like, oxidase (OXD)-like, catalase (CAT)-like, and superoxide dismutase (SOD)-like activities. It then explores the advantages of SAzymes in improving the performance of electrochemical biosensors from multiple perspectives. The review also summarizes the applications of SAzyme-based electrochemical sensors for reactive oxygen species (ROS), metabolites, neurotransmitters, and other analytes, highlighting specific examples to elucidate underlying catalytic mechanisms and understand fundamental structure-performance relationships. In the final section, the challenges faced by SAzyme-based electrochemical biosensing are discussed, along with potential solutions.
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Affiliation(s)
- Xiaofei Zhu
- College of Materials Science and Engineering, Shenzhen University, Shenzhen, 518071, China; Key Laboratory of Precision and Intelligent/School of Chemistry and Materials Science, University of Science and Technology of China, Hefei, 230026, China
| | - Can Xiong
- Key Laboratory of Precision and Intelligent/School of Chemistry and Materials Science, University of Science and Technology of China, Hefei, 230026, China
| | - Huang Zhou
- Key Laboratory of Precision and Intelligent/School of Chemistry and Materials Science, University of Science and Technology of China, Hefei, 230026, China
| | - Jin Wang
- College of Materials Science and Engineering, Shenzhen University, Shenzhen, 518071, China.
| | - Yuen Wu
- Key Laboratory of Precision and Intelligent/School of Chemistry and Materials Science, University of Science and Technology of China, Hefei, 230026, China; Deep Space Exploration Laboratory/School of Chemistry and Materials Science, University of Science and Technology of China, Hefei, 230026, China.
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2
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Chen F, Wang L, Zhou Y, Sui J, Wang T, Yang J, Cui X, Yang Y, Zhang W. Immobilization of Acinetobacter sp. A-1 and Applicability in Removal of Difenoconazole from Water-Sediment Systems. Microorganisms 2025; 13:802. [PMID: 40284638 PMCID: PMC12029691 DOI: 10.3390/microorganisms13040802] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2025] [Revised: 03/26/2025] [Accepted: 03/28/2025] [Indexed: 04/29/2025] Open
Abstract
Difenoconazole, as a systemic triazole fungicide, is a broad-spectrum, highly effective agent that has been widely used for controlling fungal diseases in 46 different crops (or crop categories), including rice, wheat, and corn. Due to the improper use of difenoconazole, concerns about its environmental residues and toxicity to non-target organisms have drawn significant attention from researchers. In response to this issue, this study aimed to isolate microbial strains capable of degrading difenoconazole from the environment. A novel difenoconazole-degrading strain, Acinetobacter sp. A-1, was screened and identified, demonstrating the ability to degrade 62.43% of 50 mg/L difenoconazole within seven days. Further optimization of the degradation conditions was conducted using single-factor experiments and response surface methodology experiments. The results showed that the optimal degradation conditions for strain A-1 were a difenoconazole concentration of 55.71 mg/L, a pH of 6.94, and an inoculation volume of 1.97%, achieving a degradation rate of 79.30%. Finally, strain A-1 was immobilized using sodium alginate, and its stability and bioremediation efficiency were evaluated. The results indicated that the immobilized strain A-1 exhibited high stability and significantly reduced the half-life of difenoconazole in the water-sediment contamination system. In the sterilized water-sediment system, the degradation rate of difenoconazole by the immobilized strain A-1 reached 65.26%. Overall, this study suggests that Acinetobacter sp. A-1 is a promising candidate for difenoconazole degradation, and immobilization technology can effectively enhance its removal efficiency in water-sediment systems.
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Affiliation(s)
| | | | | | | | | | | | | | - Ye Yang
- Key Laboratory of Sustainable Utilization of Panax Notoginseng Resources of Yunnan Province, Faculty of Life Science and Technology, Kunming University of Science and Technology, Kunming 650500, China; (F.C.); (L.W.); (Y.Z.); (J.S.); (T.W.); (J.Y.); (X.C.)
| | - Wenping Zhang
- Key Laboratory of Sustainable Utilization of Panax Notoginseng Resources of Yunnan Province, Faculty of Life Science and Technology, Kunming University of Science and Technology, Kunming 650500, China; (F.C.); (L.W.); (Y.Z.); (J.S.); (T.W.); (J.Y.); (X.C.)
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Zhou D, Tabassum S, Li J, Altundag H. In situ remediation of eutrophic Wolong Lake sediments using novel PVA-SA-biochar and PVA-SA-zeolite embedded immobilized indigenous microorganisms: a pilot study. ENVIRONMENTAL SCIENCE. PROCESSES & IMPACTS 2025; 27:597-622. [PMID: 39981997 DOI: 10.1039/d4em00580e] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/22/2025]
Abstract
Sediment restoration has become a key link in river and lake pollution control. This present study investigated the selection of dominant microbial bacteria, the selection and optimization of microbial immobilized carrier materials, and the effect of embedded immobilized microbial in situ remediation of bottom sediments based on the actual restoration pilot project of eutrophic Wolong Lake. The composite of denitrifying and photosynthetic bacteria at a ratio of 1 : 2 showed the best performance with COD, TN, and TP removal efficiencies of 74.86%, 65.2%, and 67.5%, respectively. Denitrifying bacteria to photosynthetic bacteria optimal composite bacterial solutions with polyvinyl alcohol-sodium alginate (PVA-SA), PVA-SA-zeolite and PVA-SA-biochar carriers were selected, and the effects of different carriers were analyzed and compared in terms of multiple characteristics. PVA-SA-biochar carriers showed the best ammonia-nitrogen transfer performance, mass transfer coefficient (0.681 × 10-9 m2 s-1), specific surface area (76.3 m2 MB g-1) and performed best in mechanical strength and chemical stability. The effects of biochar, PVA and SA contents on COD removal (Y) were analyzed using the 3D-response surface methodology. Biodegradation capacity (G-value) increased from 0.68 × 10-3 kg (kg h)-1 at the beginning of the test to 2.32 × 10-3 kg (kg h)-1 after 80 days of the remediation test with a growth rate of 258.82%. The water quality index has significantly improved, indicating a good restoration effect. Alpha diversity analysis showed that the Shannon and Simpson indexes increased and decreased. The relative abundance of Bacteroidota, Proteobacteria, Planctomycetota and Chloroflexi, closely related to the denitrification, decarbonization and phosphorus removal, increased while Chloroflexi decreased compared with before restoration. Embedded immobilized microbial technology significantly enhances the quality of sediment mud and the overlying water. In the long term, this approach does not release toxic substances into water bodies, thus fostering biodiversity and promoting ecological restoration. It represents a novel restoration strategy that contributes positively to environmental sustainability.
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Affiliation(s)
- Dongxu Zhou
- School of Municipal and Environmental Engineering, Shenyang Jianzhu University, Shenyang 110168, China.
| | - Salma Tabassum
- Department of Chemistry, Faculty of Science, Sakarya University, Sakarya 54187, Turkiye.
- Biomedical Magnetic and Semiconductor Materials Research Center (BIMAS-RC), Sakarya University, Sakarya 54187, Turkiye
| | - Jun Li
- School of Municipal and Environmental Engineering, Shenyang Jianzhu University, Shenyang 110168, China.
| | - Hüseyin Altundag
- Department of Chemistry, Faculty of Science, Sakarya University, Sakarya 54187, Turkiye.
- Biomedical Magnetic and Semiconductor Materials Research Center (BIMAS-RC), Sakarya University, Sakarya 54187, Turkiye
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Fan C, Qi J, Zhang C. Biosynthesis of l-theanine via one-step purification and immobilization enzyme system. J Appl Microbiol 2025; 136:lxaf053. [PMID: 40052352 DOI: 10.1093/jambio/lxaf053] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2024] [Revised: 02/16/2025] [Accepted: 03/05/2025] [Indexed: 03/19/2025]
Abstract
AIMS l-theanine, a non-protein amino acid derived from green tea, was synthesized by a relatively substantial amount of γ-glutamylmethylamide synthetase (GMAS) and polyphosphate kinase (PPK) without efficient recycling. This study establishes a cost-efficient, industrially scalable, and continuous biocatalytic platform for sustainable l-theanine production. METHODS AND RESULTS A functional catalyst system was engineered by fusing GMAS and PPK with the cell wall-binding domain derived from the Listeria monocytogenes p60 protein (Lm-p60). The enzyme complex was immobilized onto Gram-positive enhancer matrix particles, enabling facile separation and reuse over catalytic cycles. The enzymes were reusable and could be applied for six cycles with an l-theanine yield achieving 86%-93%. CONCLUSIONS The reusable catalyst demonstrates operational sustainability over multiple cycles, offering cost savings and continuous utility.
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Affiliation(s)
- Chao Fan
- School of Biological Engineering, Dalian Polytechnic University, Dalian 116034, China
- INNOBIO Corporation Limited, No. 49, DDA, Dalian 116600, China
| | - Jiakun Qi
- School of Biological Engineering, Dalian Polytechnic University, Dalian 116034, China
- INNOBIO Corporation Limited, No. 49, DDA, Dalian 116600, China
| | - Chunzhi Zhang
- School of Biological Engineering, Dalian Polytechnic University, Dalian 116034, China
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Zhang M, Wang HY, Zhang YQ. A new method to immobilize urease in silk fibroin membrane by unidirectional nanopore dehydration. Biotechnol Prog 2025; 41:e3502. [PMID: 39238226 DOI: 10.1002/btpr.3502] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2024] [Revised: 08/05/2024] [Accepted: 08/23/2024] [Indexed: 09/07/2024]
Abstract
The immobilization of free enzymes is crucial for enhancing their stability in different environments, enabling reusability, and expanding their applications. However, the development of a straightforward immobilization method that offers stability, high efficiency, biocompatibility, and modifiability remains a significant challenge. Silk fibroin (SF) is a good carrier for immobilized enzymes and drugs. Here, we employed urease as a model enzyme and utilized our developed technology called unidirectional nanopore dehydration (UND) to efficiently dehydrate a regenerated SF solution containing urease in a single step, resulting in the preparation of a highly functionalized SF membrane immobilizing urease (UI-SFM). The preparation process of UI-SFM is based on an all-water system, which is mild, green and able to efficiently and stably immobilize urease in the membranes, maintaining 92.7% and 82.8% relative enzyme activity after 30 days of storage in dry and hydrated states, respectively. Additionally, we performed additional post-treatments, including stretching and cross-linking with polyethylene glycol diglycidyl ether (PEGDE), to obtain two more robust immobilized urease membranes (UI-SFMs and UI-SFMc). The thermal and storage stability of these two membranes were significantly improved, and the recovery ratio of enzyme activity reached more than 90%. After 10 repetitions of the enzymatic reaction, the activity recovery of UI-SFMs and UI-SFMc remained at 92% and 88%, respectively. The results suggest that both UND-based and post-treatment-developed membranes exhibit excellent urease immobilization capabilities. Furthermore, the enzyme immobilization method offers a straightforward and versatile approach for efficient and stable enzyme immobilization, while its flexible modifiability caters to diverse application requirements.
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Affiliation(s)
- Meng Zhang
- Silk Biotechnology Laboratory, School of Biology and Basic Medical Sciences, National Engineering Laboratory for Modern Silk, Soochow University, Suzhou, People's Republic of China
| | - Hai-Yan Wang
- Stomatology Department, The People's Hospital of Suzhou New District, Suzhou, People's Republic of China
| | - Yu-Qing Zhang
- Silk Biotechnology Laboratory, School of Biology and Basic Medical Sciences, National Engineering Laboratory for Modern Silk, Soochow University, Suzhou, People's Republic of China
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6
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Yang L, Fu Z, Xie J, Ding Z. Portable sensing of hydrogen peroxide using MOF-based nanozymes. Food Res Int 2024; 197:115272. [PMID: 39593350 DOI: 10.1016/j.foodres.2024.115272] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/19/2024] [Revised: 10/02/2024] [Accepted: 10/22/2024] [Indexed: 11/28/2024]
Abstract
Hydrogen peroxide (H2O2) is extensively used in water treatment and food preservation for its pathogen-killing efficacy. Excessive H2O2 intake, however, can lead to poisoning with symptoms such as abdominal pain and breathing difficulties. Additionally, small amounts of H2O2 may be generated during food preservation, necessitating careful control to meet safety regulations. Real-time detection of H2O2 is crucial for process safety and compliance. In this study, a Zr-MOF-based colorimetric fluorescent nanozyme sensor (NH2-UiO-67(Zr/Cu)) along with a smartphone-assisted portable device were developed for detecting H2O2. The sensor, NH2-UiO-67(Zr/Cu), combines the stable structural properties of Zr-MOF with ligand-generated fluorescence and exhibits peroxidase-like activity. The sensor demonstrated a detection range of 0-1000 μM, with limits of detection (LOD) of 0.0057 μM for the colorimetric assay and 0.0020 μM for the fluorescence assay. Additionally, we designed and developed a portable, smartphone-assisted device using 3D printing technology. This device offers a detection range of 0-750 μM, with LODs of 0.0093 μM in colorimetric mode and 0.0311 μM in fluorescence mode. The developed colorimetric fluorescent nanozyme sensor and portable device show significant potential for the rapid on-site detection of H2O2, offering a more convenient and reliable approach for quick identification of analytes in practical applications.
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Affiliation(s)
- LingFeng Yang
- College of Food Science and Technology, Shanghai Ocean University, Shanghai 201306, China
| | - Zuyao Fu
- College of Food Science and Technology, Shanghai Ocean University, Shanghai 201306, China
| | - Jing Xie
- College of Food Science and Technology, Shanghai Ocean University, Shanghai 201306, China; Shanghai Engineering Research Center of Aquatic-Product Processing & Preservation, Shanghai 201306, China; Key Laboratory of Aquatic Products High-quality Utilization, Storage and Transportation (Coconstruction by Ministry and Province), Ministry of Agriculture and Rural Affairs, Shanghai 201306, China.
| | - Zhaoyang Ding
- College of Food Science and Technology, Shanghai Ocean University, Shanghai 201306, China; Shanghai Engineering Research Center of Aquatic-Product Processing & Preservation, Shanghai 201306, China; Key Laboratory of Aquatic Products High-quality Utilization, Storage and Transportation (Coconstruction by Ministry and Province), Ministry of Agriculture and Rural Affairs, Shanghai 201306, China; Marine Biomedical Science and Technology Innovation Platform of Lin-gang Special Area, Shanghai 201306, China.
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Patil PD, Gargate N, Dongarsane K, Jagtap H, Phirke AN, Tiwari MS, Nadar SS. Revolutionizing biocatalysis: A review on innovative design and applications of enzyme-immobilized microfluidic devices. Int J Biol Macromol 2024; 281:136193. [PMID: 39362440 DOI: 10.1016/j.ijbiomac.2024.136193] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/27/2023] [Revised: 09/01/2024] [Accepted: 09/29/2024] [Indexed: 10/05/2024]
Abstract
Integrating microfluidic devices and enzymatic processes in biocatalysis is a rapidly advancing field with promising applications. This review explores various facets, including applications, scalability, techno-commercial implications, and environmental consequences. Enzyme-embedded microfluidic devices offer advantages such as compact dimensions, rapid heat transfer, and minimal reagent consumption, especially in pharmaceutical optically pure compound synthesis. Addressing scalability challenges involves strategies for uniform flow distribution and consistent residence time. Incorporation with downstream processing and biocatalytic reactions makes the overall process environmentally friendly. The review navigates challenges related to reaction kinetics, cofactor recycling, and techno-commercial aspects, highlighting cost-effectiveness, safety enhancements, and reduced energy consumption. The potential for automation and commercial-grade infrastructure is discussed, considering initial investments and long-term savings. The incorporation of machine learning in enzyme-embedded microfluidic devices advocates a blend of experimental and in-silico methods for optimization. This comprehensive review examines the advancements and challenges associated with these devices, focusing on their integration with enzyme immobilization techniques, the optimization of process parameters, and the techno-commercial considerations crucial for their widespread implementation. Furthermore, this review offers novel insights into strategies for overcoming limitations such as design complexities, laminar flow challenges, enzyme loading optimization, catalyst fouling, and multi-enzyme immobilization, highlighting the potential for sustainable and efficient enzymatic processes in various industries.
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Affiliation(s)
- Pravin D Patil
- Department of Basic Science & Humanities, Mukesh Patel School of Technology Management & Engineering, SVKM's NMIMS, Mumbai, Maharashtra 400056, India
| | - Niharika Gargate
- Department of Biotechnology Engineering, Kolhapur Institute of Technology's College of Engineering, Kolhapur 416 234, India
| | - Khushi Dongarsane
- Department of Biotechnology Engineering, Kolhapur Institute of Technology's College of Engineering, Kolhapur 416 234, India
| | - Hrishikesh Jagtap
- Department of Biotechnology Engineering, Kolhapur Institute of Technology's College of Engineering, Kolhapur 416 234, India
| | - Ajay N Phirke
- Department of Basic Science & Humanities, Mukesh Patel School of Technology Management & Engineering, SVKM's NMIMS, Mumbai, Maharashtra 400056, India
| | - Manishkumar S Tiwari
- Department of Data Science, Mukesh Patel School of Technology Management & Engineering, SVKM's NMIMS, Mumbai, Maharashtra 400056, India
| | - Shamraja S Nadar
- Department of Chemical Engineering, Institute of Chemical Technology, Matunga (E), Mumbai 400019, India.
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Fan L, Mei X, Huang Y, Zheng W, Wei P, Jiang M, Dong W. Advanced applications in enzyme-induced electrospun nanofibers. NANOSCALE 2024; 16:19606-19619. [PMID: 39370938 DOI: 10.1039/d4nr03404j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/08/2024]
Abstract
Electrospun nanofibers, renowned for their high specific surface area, robust mechanical properties, and versatile chemical functionalities, offer a promising platform for enzyme immobilization. Over the past decade, significant strides have been made in developing enzyme-induced electrospun nanofibers (EIEN). This review systematically summarizes the advanced applications of EIEN which are fabricated using both non-specific immobilization methods including interfacial adsorption (direct adsorption, cross-linking, and covalent binding) and encapsulation, and specific immobilization techniques (coordination and affinity immobilization). Future research should prioritize optimizing immobilization techniques to achieve a balance between enzyme activity, stability, and cost-effectiveness, thereby facilitating the industrialization of EIEN. We elucidate the rationale behind various immobilization methods and their applications, such as wastewater treatment, biosensors, and biomedicine. We aim to provide guidelines for developing suitable EIEN immobilization techniques tailored to specific future applications.
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Affiliation(s)
- Lingling Fan
- Key Laboratory for Waste Plastics Biocatalytic Degradation and Recycling, College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing, 211800, PR China.
| | - Xingyu Mei
- Key Laboratory for Waste Plastics Biocatalytic Degradation and Recycling, College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing, 211800, PR China.
| | - Yigen Huang
- Key Laboratory for Waste Plastics Biocatalytic Degradation and Recycling, College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing, 211800, PR China.
| | - Wenxiang Zheng
- Key Laboratory for Waste Plastics Biocatalytic Degradation and Recycling, College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing, 211800, PR China.
| | - Ping Wei
- Key Laboratory for Waste Plastics Biocatalytic Degradation and Recycling, College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing, 211800, PR China.
| | - Min Jiang
- Key Laboratory for Waste Plastics Biocatalytic Degradation and Recycling, College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing, 211800, PR China.
- State Key Laboratory of Materials-Oriented Chemical Engineering, Nanjing Tech University, Nanjing, 211800, PR China
| | - Weiliang Dong
- Key Laboratory for Waste Plastics Biocatalytic Degradation and Recycling, College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing, 211800, PR China.
- State Key Laboratory of Materials-Oriented Chemical Engineering, Nanjing Tech University, Nanjing, 211800, PR China
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9
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Ölçücü G, Wollenhaupt B, Kohlheyer D, Jaeger KE, Krauss U. Magnetic protein aggregates generated by supramolecular assembly of ferritin cages - a modular strategy for the immobilization of enzymes. Front Bioeng Biotechnol 2024; 12:1478198. [PMID: 39512655 PMCID: PMC11541948 DOI: 10.3389/fbioe.2024.1478198] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/09/2024] [Accepted: 10/09/2024] [Indexed: 11/15/2024] Open
Abstract
Introduction Efficient and cost-effective immobilization methods are crucial for advancing the utilization of enzymes in industrial biocatalysis. To this end, in vivo immobilization methods relying on the completely biological production of immobilizates represent an interesting alternative to conventional carrier-based immobilization methods. This study aimed to introduce a novel immobilization strategy using in vivo-produced magnetic protein aggregates (MPAs). Methods MPA production was achieved by expressing gene fusions of the yellow fluorescent protein variant citrine and ferritin variants, including a magnetically enhanced Escherichia coli ferritin mutant. Cellular production of the gene fusions allows supramolecular assembly of the fusion proteins in vivo, driven by citrine-dependent dimerization of ferritin cages. Magnetic properties were confirmed using neodymium magnets. A bait/prey strategy was used to attach alcohol dehydrogenase (ADH) to the MPAs, creating catalytically active MPAs (CatMPAs). These CatMPAs were purified via magnetic columns or centrifugation. Results The fusion of the mutant E. coli ferritin to citrine yielded fluorescent, insoluble protein aggregates, which are released upon cell lysis and coalesce into MPAs. MPAs display magnetic properties, as verified by their attraction to neodymium magnets. We further show that these fully in vivo-produced protein aggregates can be magnetically purified without ex vivo iron loading. Using a bait/prey strategy, MPAs were functionalized by attaching alcohol dehydrogenase post-translationally, creating catalytically active magnetic protein aggregates (CatMPAs). These CatMPAs were easily purified from crude extracts via centrifugation or magnetic columns and showed enhanced stability. Discussion This study presents a modular strategy for the in vivo production of MPAs as scaffold for enzyme immobilization. The approach eliminates the need for traditional, expensive carriers and simplifies the purification process by leveraging the insoluble nature and the magnetic properties of the aggregates, opening up the potential for novel, streamlined applications in biocatalysis.
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Affiliation(s)
- Gizem Ölçücü
- Institute of Bio- and Geosciences IBG-1: Biotechnology, Forschungszentrum Jülich GmbH, Jülich, Germany
- Institute of Molecular Enzyme Technology, Heinrich Heine University Düsseldorf, Forschungszentrum Jülich GmbH, Jülich, Germany
| | - Bastian Wollenhaupt
- Institute of Bio- and Geosciences IBG-1: Biotechnology, Forschungszentrum Jülich GmbH, Jülich, Germany
| | - Dietrich Kohlheyer
- Institute of Bio- and Geosciences IBG-1: Biotechnology, Forschungszentrum Jülich GmbH, Jülich, Germany
| | - Karl-Erich Jaeger
- Institute of Bio- and Geosciences IBG-1: Biotechnology, Forschungszentrum Jülich GmbH, Jülich, Germany
- Institute of Molecular Enzyme Technology, Heinrich Heine University Düsseldorf, Forschungszentrum Jülich GmbH, Jülich, Germany
| | - Ulrich Krauss
- Institute of Bio- and Geosciences IBG-1: Biotechnology, Forschungszentrum Jülich GmbH, Jülich, Germany
- Institute of Molecular Enzyme Technology, Heinrich Heine University Düsseldorf, Forschungszentrum Jülich GmbH, Jülich, Germany
- Department of Biochemistry, University of Bayreuth, Bayreuth, Germany
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10
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Naim M, Mohammat MF, Mohd Ariff PNA, Uzir MH. Biocatalytic approach for the synthesis of chiral alcohols for the development of pharmaceutical intermediates and other industrial applications: A review. Enzyme Microb Technol 2024; 180:110483. [PMID: 39033578 DOI: 10.1016/j.enzmictec.2024.110483] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2024] [Revised: 06/27/2024] [Accepted: 07/14/2024] [Indexed: 07/23/2024]
Abstract
Biocatalysis has emerged as a strong tool for the synthesis of active pharmaceutical ingredients (APIs). In the early twentieth century, whole cell biocatalysis was used to develop the first industrial biocatalytic processes, and the precise work of enzymes was unknown. Biocatalysis has evolved over the years into an essential tool for modern, cost-effective, and sustainable pharmaceutical manufacturing. Meanwhile, advances in directed evolution enable the rapid production of process-stable enzymes with broad substrate scope and high selectivity. Large-scale synthetic pathways incorporating biocatalytic critical steps towards >130 APIs of authorized pharmaceuticals and drug prospects are compared in terms of steps, reaction conditions, and scale with the corresponding chemical procedures. This review is designed on the functional group developed during the reaction forming alcohol functional groups. Some important biocatalyst sources, techniques, and challenges are described. A few APIs and their utilization in pharmaceutical drugs are explained here in this review. Biocatalysis has provided shorter, more efficient, and more sustainable alternative pathways toward existing small molecule APIs. Furthermore, non-pharmaceutical applications of biocatalysts are also mentioned and discussed. Finally, this review includes the future outlook and challenges of biocatalysis. In conclusion, Further research and development of promising enzymes are required before they can be used in industry.
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Affiliation(s)
- Mohd Naim
- School of Chemical Engineering, Engineering Campus, Universiti Sains Malaysia, Nibong Tebal, Pulau Pinang 14300, Malaysia.
| | - Mohd Fazli Mohammat
- Centre for Chemical Synthesis & Polymer Technology, Institute of Science (IoS), Kompleks Inspirasi, Universiti Teknologi MARA, Shah Alam, Selangor Darul Ehsan 40450, Malaysia.
| | - Putri Nur Arina Mohd Ariff
- Department of Nanopharmaceutical Sciences, Nagoya Institute of Technology, Gokiso, Showa-ku, Nagoya 466-8555, Japan.
| | - Mohamad Hekarl Uzir
- School of Chemical Engineering, Engineering Campus, Universiti Sains Malaysia, Nibong Tebal, Pulau Pinang 14300, Malaysia.
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11
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Chen X, Andrews MP. Polarized and Evanescent Guided Wave Surface-Enhanced Raman Spectroscopy of Ligand Interactions on a Plasmonic Nanoparticle Optical Chemical Bench. BIOSENSORS 2024; 14:409. [PMID: 39329784 PMCID: PMC11430309 DOI: 10.3390/bios14090409] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/25/2024] [Revised: 08/08/2024] [Accepted: 08/14/2024] [Indexed: 09/28/2024]
Abstract
This study examined applications of polarized evanescent guided wave surface-enhanced Raman spectroscopy to determine the binding and orientation of small molecules and ligand-modified nanoparticles, and the relevance of this technique to lab-on-a-chip, surface plasmon polariton and other types of field enhancement techniques relevant to Raman biosensing. A simplified tutorial on guided-wave Raman spectroscopy is provided that introduces the notion of plasmonic nanoparticle field enhancements to magnify the otherwise weak TE- and TM-polarized evanescent fields for Raman scattering on a simple plasmonic nanoparticle slab waveguide substrate. The waveguide construct is called an optical chemical bench (OCB) to emphasize its adaptability to different kinds of surface chemistries that can be envisaged to prepare optical biosensors. The OCB forms a complete spectroscopy platform when integrated into a custom-built Raman spectrograph. Plasmonic enhancement of the evanescent field is achieved by attaching porous carpets of Au@Ag core shell nanoparticles to the surface of a multi-mode glass waveguide substrate. We calibrated the OCB by establishing the dependence of SER spectra of adsorbed 4-mercaptopyridine and 4-aminobenzoic acid on the TE/TM polarization state of the evanescent field. We contrasted the OCB construct with more elaborate photonic chip devices that also benefit from enhanced evanescent fields, but without the use of plasmonics. We assemble hierarchies of matter to show that the OCB can resolve the binding of Fe2+ ions from water at the nanoscale interface of the OCB by following the changes in the SER spectra of 4MPy as it coordinates the cation. A brief introduction to magnetoplasmonics sets the stage for a study that resolves the 4ABA ligand interface between guest magnetite nanoparticles adsorbed onto host plasmonic Au@Ag nanoparticles bound to the OCB. In some cases, the evanescent wave TM polarization was strongly attenuated, most likely due to damping by inertial charge carriers that favor optical loss for this polarization state in the presence of dense assemblies of plasmonic nanoparticles. The OCB offers an approach that provides vibrational and orientational information for (bio)sensing at interfaces that may supplement the information content of evanescent wave methods that rely on perturbations in the refractive index in the region of the evanescent wave.
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Affiliation(s)
| | - Mark P. Andrews
- Department of Chemistry, McGill University, 801 Sherbrooke St. West, Montreal, QC H3A 0B8, Canada;
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Abdelhamid MAA, Khalifa HO, Yoon HJ, Ki MR, Pack SP. Microbial Immobilized Enzyme Biocatalysts for Multipollutant Mitigation: Harnessing Nature's Toolkit for Environmental Sustainability. Int J Mol Sci 2024; 25:8616. [PMID: 39201301 PMCID: PMC11355015 DOI: 10.3390/ijms25168616] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2024] [Revised: 07/30/2024] [Accepted: 07/31/2024] [Indexed: 09/02/2024] Open
Abstract
The ever-increasing presence of micropollutants necessitates the development of environmentally friendly bioremediation strategies. Inspired by the remarkable versatility and potent catalytic activities of microbial enzymes, researchers are exploring their application as biocatalysts for innovative environmental cleanup solutions. Microbial enzymes offer remarkable substrate specificity, biodegradability, and the capacity to degrade a wide array of pollutants, positioning them as powerful tools for bioremediation. However, practical applications are often hindered by limitations in enzyme stability and reusability. Enzyme immobilization techniques have emerged as transformative strategies, enhancing enzyme stability and reusability by anchoring them onto inert or activated supports. These improvements lead to more efficient pollutant degradation and cost-effective bioremediation processes. This review delves into the diverse immobilization methods, showcasing their success in degrading various environmental pollutants, including pharmaceuticals, dyes, pesticides, microplastics, and industrial chemicals. By highlighting the transformative potential of microbial immobilized enzyme biocatalysts, this review underscores their significance in achieving a cleaner and more sustainable future through the mitigation of micropollutant contamination. Additionally, future research directions in areas such as enzyme engineering and machine learning hold immense promise for further broadening the capabilities and optimizing the applications of immobilized enzymes in environmental cleanup.
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Affiliation(s)
- Mohamed A. A. Abdelhamid
- Department of Biotechnology and Bioinformatics, Korea University, Sejong-ro 2511, Sejong 30019, Republic of Korea; (M.A.A.A.); (M.-R.K.)
- Department of Botany and Microbiology, Faculty of Science, Minia University, Minia 61519, Egypt
- Faculty of Education and Art, Sohar University, Sohar 311, Oman
| | - Hazim O. Khalifa
- Department of Veterinary Medicine, College of Agriculture and Veterinary Medicine, United Arab Emirates University, Al Ain P.O. Box 1555, United Arab Emirates;
- Department of Pharmacology, Faculty of Veterinary Medicine, Kafrelsheikh University, Kafr El-Sheikh 33516, Egypt
| | - Hyo Jik Yoon
- Institute of Natural Science, Korea University, Sejong-ro 2511, Sejong 30019, Republic of Korea;
| | - Mi-Ran Ki
- Department of Biotechnology and Bioinformatics, Korea University, Sejong-ro 2511, Sejong 30019, Republic of Korea; (M.A.A.A.); (M.-R.K.)
- Institute of Industrial Technology, Korea University, Sejong-ro 2511, Sejong 30019, Republic of Korea
| | - Seung Pil Pack
- Department of Biotechnology and Bioinformatics, Korea University, Sejong-ro 2511, Sejong 30019, Republic of Korea; (M.A.A.A.); (M.-R.K.)
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13
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Tawakey SH, Mansour M, Soltan A, Salim AI. Early detection of hypo/hyperglycemia using a microneedle electrode array-based biosensor for glucose ultrasensitive monitoring in interstitial fluid. LAB ON A CHIP 2024; 24:3958-3972. [PMID: 39015046 DOI: 10.1039/d4lc00365a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 07/18/2024]
Abstract
Diabetes is a common chronic metabolic disease with a wide range of clinical symptoms and consequences and one of the main causes of death. For the management of diabetes, painless and continuous interstitial fluid (ISF) glucose monitoring is ideal. Here, we demonstrate continuous diabetes monitoring using an integrated microneedle (MN) biosensor with an emergency alert system. MNs are a novel technique in the field of biomedical engineering because of their ability to analyze bioinformation with minimal invasion. In this work we developed a poly(methyl methacrylate) (PMMA) based MN glucose sensor. The device was produced by the 3D printing technique, microfabrication, electrodeposition, and enzyme immobilization step. The in vitro test for the glucose MN sensor showed a linear range from 1.5 to 14 mM with a sensitivity of 1.51 μA mM-1, limit of detection (LOD) of 0.35 mM and good selectivity. Highly repeatable sensing is observed with good reproducibility. The interference-free detection of glucose in the presence of physiologically relevant concentrations of ascorbic acid, uric acid, and mannose is demonstrated, along with the operational stability of the array. After resolving the biofouling consequences linked to on-body sensing, this MN platform would be appealing for minimally invasive electrochemical glucose monitoring. An alert is sent to confidants via email or SMS when the values are abnormal. The application is also able to display the recorded values in the form of a graph to help determine the state of health of the user over a period of time. It can be concluded that continuous monitoring and an emergency alert system are important for keeping an eye on diabetic patients and can send alert in case of an abnormal situation of the patient.
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Affiliation(s)
- Samar H Tawakey
- Nanoelectronics Integrated Systems Center (NISC), Nile University, 26th of July Corridor, Sheikh Zayed City, 12588, Giza, Egypt
- Chemistry Department, Faculty of Science, Tanta University, Tanta 31527, Egypt
| | - Mohammad Mansour
- Nanoelectronics Integrated Systems Center (NISC), Nile University, 26th of July Corridor, Sheikh Zayed City, 12588, Giza, Egypt
| | - Ahmed Soltan
- Nanoelectronics Integrated Systems Center (NISC), Nile University, 26th of July Corridor, Sheikh Zayed City, 12588, Giza, Egypt
| | - Alyaa I Salim
- School of Biotechnology, Nile University, 26th of July Corridor, Sheikh Zayed City, 12588, Giza, Egypt.
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Patil PD, Kelkar RK, Patil NP, Pise PV, Patil SP, Patil AS, Kulkarni NS, Tiwari MS, Phirke AN, Nadar SS. Magnetic nanoflowers: a hybrid platform for enzyme immobilization. Crit Rev Biotechnol 2024; 44:795-816. [PMID: 37455411 DOI: 10.1080/07388551.2023.2230518] [Citation(s) in RCA: 10] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/07/2022] [Accepted: 04/04/2023] [Indexed: 07/18/2023]
Abstract
The use of organic-inorganic hybrid nanoflowers as a support material for enzyme immobilization has gained significant attention in recent years due to their high stability, ease of preparation, and enhanced catalytic activity. However, a major challenge in utilizing these hybrid nanoflowers for enzyme immobilization is the difficulty in handling and separating them due to their low density and high dispersion. To address this issue, magnetic nanoflowers have emerged as a promising alternative enzyme immobilization platform due to their easy separation, structural stability, and ability to enhance catalytic efficiency. This review focuses on different methods for designing magnetic nanoflowers, as well as future research directions. Additionally, it provides examples of enzymes immobilized in the form of magnetic nanoflowers and their applications in environmental remediation, biosensors, and food industries. Finally, the review discusses possible ways to improve the material for enhanced catalytic activity, structural stability, and scalability.
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Affiliation(s)
- Pravin D Patil
- Department of Basic Science & Humanities, SVKM'S NMIMS Mukesh Patel School of Technology Management & Engineering, Mumbai, Maharashtra, India
| | - Radhika K Kelkar
- Department of Biotechnology Engineering, Kolhapur Institute of Technology's College of Engineering (Autonomous), Kolhapur, India
| | - Neha P Patil
- Department of Biotechnology Engineering, Kolhapur Institute of Technology's College of Engineering (Autonomous), Kolhapur, India
| | - Pradnya V Pise
- Department of Biological Engineering, Indian Institute of Technology, Gandhinagar, Gandhinagar, India
| | - Sadhana P Patil
- Department of Biotechnology, National Institute of Technology, Tadepalligudam, India
| | - Arundhatti S Patil
- Department of Biotechnology Engineering, Kolhapur Institute of Technology's College of Engineering (Autonomous), Kolhapur, India
| | - Nishant S Kulkarni
- Department of Biotechnology Engineering, Kolhapur Institute of Technology's College of Engineering (Autonomous), Kolhapur, India
| | - Manishkumar S Tiwari
- Department of Chemical Engineering, SVKM'S NMIMS Mukesh Patel School of Technology Management & Engineering, Mumbai, Maharashtra, India
| | - Ajay N Phirke
- Department of Chemical Engineering, SVKM'S NMIMS Mukesh Patel School of Technology Management & Engineering, Mumbai, Maharashtra, India
| | - Shamraja S Nadar
- Department of Chemical Engineering, Institute of Chemical Technology, Mumbai, India
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15
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Zhang W, Shao ZQ, Wang ZX, Ye YF, Li SF, Wang YJ. Advances in aldo-keto reductases immobilization for biocatalytic synthesis of chiral alcohols. Int J Biol Macromol 2024; 274:133264. [PMID: 38901517 DOI: 10.1016/j.ijbiomac.2024.133264] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/23/2024] [Revised: 06/13/2024] [Accepted: 06/17/2024] [Indexed: 06/22/2024]
Abstract
Chiral alcohols are essential building blocks of numerous pharmaceuticals and fine chemicals. Aldo-keto reductases (AKRs) constitute a superfamily of oxidoreductases that catalyze the reduction of aldehydes and ketones to their corresponding alcohols using NAD(P)H as a coenzyme. Knowledge about the crucial roles of AKRs immobilization in the biocatalytic synthesis of chiral alcohols is expanding. Herein, we reviewed the characteristics of various AKRs immobilization approaches, the applications of different immobilization materials, and the prospects of continuous flow bioreactor construction by employing these immobilized biocatalysts for synthesizing chiral alcohols. Finally, the opportunities and ongoing challenges for AKR immobilization are discussed and the outlook for this emerging area is analyzed.
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Affiliation(s)
- Wen Zhang
- Key Laboratory of Bioorganic Synthesis of Zhejiang Province, College of Biotechnology and Bioengineering, Zhejiang University of Technology, Hangzhou 310014, PR China; Engineering Research Center of Bioconversion and Biopurification of the Ministry of Education, Zhejiang University of Technology, Hangzhou, Zhejiang 310014, PR China; The National and Local Joint Engineering Research Center for Biomanufacturing of Chiral Chemicals, Zhejiang University of Technology, Hangzhou 310014, PR China
| | - Zi-Qing Shao
- Key Laboratory of Bioorganic Synthesis of Zhejiang Province, College of Biotechnology and Bioengineering, Zhejiang University of Technology, Hangzhou 310014, PR China; Engineering Research Center of Bioconversion and Biopurification of the Ministry of Education, Zhejiang University of Technology, Hangzhou, Zhejiang 310014, PR China; The National and Local Joint Engineering Research Center for Biomanufacturing of Chiral Chemicals, Zhejiang University of Technology, Hangzhou 310014, PR China
| | - Zhi-Xiu Wang
- Key Laboratory of Bioorganic Synthesis of Zhejiang Province, College of Biotechnology and Bioengineering, Zhejiang University of Technology, Hangzhou 310014, PR China; Engineering Research Center of Bioconversion and Biopurification of the Ministry of Education, Zhejiang University of Technology, Hangzhou, Zhejiang 310014, PR China; The National and Local Joint Engineering Research Center for Biomanufacturing of Chiral Chemicals, Zhejiang University of Technology, Hangzhou 310014, PR China
| | - Yuan-Fan Ye
- Key Laboratory of Bioorganic Synthesis of Zhejiang Province, College of Biotechnology and Bioengineering, Zhejiang University of Technology, Hangzhou 310014, PR China; Engineering Research Center of Bioconversion and Biopurification of the Ministry of Education, Zhejiang University of Technology, Hangzhou, Zhejiang 310014, PR China; The National and Local Joint Engineering Research Center for Biomanufacturing of Chiral Chemicals, Zhejiang University of Technology, Hangzhou 310014, PR China
| | - Shu-Fang Li
- Key Laboratory of Bioorganic Synthesis of Zhejiang Province, College of Biotechnology and Bioengineering, Zhejiang University of Technology, Hangzhou 310014, PR China; Engineering Research Center of Bioconversion and Biopurification of the Ministry of Education, Zhejiang University of Technology, Hangzhou, Zhejiang 310014, PR China; The National and Local Joint Engineering Research Center for Biomanufacturing of Chiral Chemicals, Zhejiang University of Technology, Hangzhou 310014, PR China
| | - Ya-Jun Wang
- Key Laboratory of Bioorganic Synthesis of Zhejiang Province, College of Biotechnology and Bioengineering, Zhejiang University of Technology, Hangzhou 310014, PR China; Engineering Research Center of Bioconversion and Biopurification of the Ministry of Education, Zhejiang University of Technology, Hangzhou, Zhejiang 310014, PR China; The National and Local Joint Engineering Research Center for Biomanufacturing of Chiral Chemicals, Zhejiang University of Technology, Hangzhou 310014, PR China.
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16
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IŞIK C. An Alternative Approach to Plastic Recycling: Fabrication and Characterization of rPET/CA Nanofiber Carriers to Enhance Porcine Pancreatic Lipase Stability Properties. ACS OMEGA 2024; 9:31313-31327. [PMID: 39072091 PMCID: PMC11270705 DOI: 10.1021/acsomega.3c07227] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/20/2023] [Revised: 01/18/2024] [Accepted: 02/01/2024] [Indexed: 07/30/2024]
Abstract
In response to the increasing demand for sustainable technologies, this study presents a novel approach to plastic recycling. In this study, a method was presented to produce nanofiber carriers by electrospinning using recycled poly(ethylene terephthalate) (rPET) obtained from wastewater bottles and cellulose acetate (CA). These carriers serve as a platform for immobilized porcine pancreatic lipase (PPL), aiming to enhance its stability. The production parameters for the rPET/CA nanofibers were found to be an rPET concentration of 15% (v/v), a CA concentration of 6% (v/v), an electrical voltage of 13 kV, a needle-collector distance of 18 cm, and an injection speed of 0.1 mL/h. The nanofiber structure and morphology were assessed by using attenuated total reflectance-infrared Fourier transform infrared (ATR-FTIR), thermogravimetric analysis (TGA), and scanning electron microscopy (SEM) analyses. Then, PPL was immobilized onto the nanofibers through adsorption and cross-linking methods. The optimum temperature for free PPL was determined to be 30 °C, and the optimum temperature for PPL immobilized on rPET/CA was determined to be 40 °C. It was observed that, especially under acidic conditions, after the immobilization process, PPL immobilized rPET/CA nanofibers became more resistant to pH changes than free PLL. Furthermore, the immobilized PPL exhibited improved pH stability, reusability, and thermal stability compared to its free counterpart. This innovative approach not only contributes to plastic waste reduction but also opens new avenues for enzyme immobilization with potential applications in biocatalysis and wastewater treatment.
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Affiliation(s)
- Ceyhun IŞIK
- Faculty of Science, Chemistry
Department, Muğla Sıtkı
Koçman University, Muğla 48000, Türkiye
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17
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Zander M, Schmid J, Kabisch J. Implementation of Spore Display in Paenibacillus polymyxa with Different Hydrolytic Enzymes. Microorganisms 2024; 12:1438. [PMID: 39065206 PMCID: PMC11278568 DOI: 10.3390/microorganisms12071438] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2024] [Revised: 07/09/2024] [Accepted: 07/12/2024] [Indexed: 07/28/2024] Open
Abstract
Biotechnological processes are essential for producing climate-friendly high-value chemicals or pharmaceutical compounds, which can include steps catalyzed by enzymes. Therefore, establishing new, robust, and cheap enzyme production processes is desirable. One possible way to enhance processes is through the use of the spore display method. Spore display can present heterologous proteins on the surface of bacterial spores, offering numerous advantages in a range of biotechnological applications. This study demonstrates the implementation of the spore display method in Paenibacillus polymyxa, achieved by modifying the spore surface, incorporating an anchoring protein, and attaching green fluorescent protein to it, allowing the visualization of fluorescent spores. Following the initial experiment, a native lipase (Lip3), a heterologous lipase (LipA) from Bacillus subtilis, a native esterase (PnbA) from P. polymyxa, and a lipoyl synthase were expressed during sporulation and displayed on the spore surface. The activity profiles were determined in the temperature range from 4 °C to 70 °C. The PnbA reached its optimum at 4 °C, whereas the LipA from B. subtilis showed 4.4-fold higher activity at 42 °C compared to the control. Furthermore, we explored a possible new technique for the purification of enzymes with the TEV cleavage site between the anchor and the protein of interest. Finally, we showed a not-yet-described side activity of the lipoyl synthase over a wide temperature range.
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Affiliation(s)
- Maximilian Zander
- Institute for Molecular Microbiology and Biotechnology, University of Münster, Corrensstrasse 3, 48149 Muenster, Germany
| | - Jochen Schmid
- Institute for Molecular Microbiology and Biotechnology, University of Münster, Corrensstrasse 3, 48149 Muenster, Germany
| | - Johannes Kabisch
- Department of Biotechnology and Food Science, NTNU Trondheim, Sem Sælandsvei 6/8, 7491 Trondheim, Norway
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18
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Dan Y, Gurevich D, Gershoni O, Netti F, Adler-Abramovich L, Afriat-Jurnou L. Coupling Peptide-Based Encapsulation of Enzymes with Bacteria for Paraoxon Bioremediation. ACS APPLIED MATERIALS & INTERFACES 2024; 16:35155-35165. [PMID: 38920304 PMCID: PMC11247427 DOI: 10.1021/acsami.4c06501] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/27/2024]
Abstract
The catalytic efficiency of enzymes can be harnessed as an environmentally friendly solution for decontaminating various xenobiotics and toxins. However, for some xenobiotics, several enzymatic steps are needed to obtain nontoxic products. Another challenge is the low durability and stability of many native enzymes in their purified form. Herein, we coupled peptide-based encapsulation of bacterial phosphotriesterase with soil-originated bacteria, Arthrobacter sp. 4Hβ as an efficient system capable of biodegradation of paraoxon, a neurotoxin pesticide. Specifically, recombinantly expressed and purified methyl parathion hydrolase (MPH), with high hydrolytic activity toward paraoxon, was encapsulated within peptide nanofibrils, resulting in increased shelf life and retaining ∼50% activity after 132 days since purification. Next, the addition of Arthrobacter sp. 4Hβ, capable of degrading para-nitrophenol (PNP), the hydrolysis product of paraoxon, which is still toxic, resulted in nondetectable levels of PNP. These results present an efficient one-pot system that can be further developed as an environmentally friendly solution, coupling purified enzymes and native bacteria, for pesticide bioremediation. We further suggest that this system can be tailored for different xenobiotics by encapsulating the rate-limiting key enzymes followed by their combination with environmental bacteria that can use the enzymatic step products for full degradation without the need to engineer synthetic bacteria.
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Affiliation(s)
- Yoav Dan
- Department of Oral Biology, The Goldschleger School of Dental Medicine, Faculty of Medical and Health Sciences, Tel Aviv University, Tel Aviv 6997801, Israel
- The Center for Nanoscience and Nanotechnology, Tel Aviv University, Tel Aviv 6997801, Israel
- The Center for the Physics and Chemistry of Living Systems, Tel Aviv University, Tel Aviv 6997801, Israel
| | - David Gurevich
- Migal-Galilee Research Institute, Kiryat Shmona 11016, Israel
| | - Ofir Gershoni
- Migal-Galilee Research Institute, Kiryat Shmona 11016, Israel
| | - Francesca Netti
- Department of Oral Biology, The Goldschleger School of Dental Medicine, Faculty of Medical and Health Sciences, Tel Aviv University, Tel Aviv 6997801, Israel
- The Center for Nanoscience and Nanotechnology, Tel Aviv University, Tel Aviv 6997801, Israel
- The Center for the Physics and Chemistry of Living Systems, Tel Aviv University, Tel Aviv 6997801, Israel
| | - Lihi Adler-Abramovich
- Department of Oral Biology, The Goldschleger School of Dental Medicine, Faculty of Medical and Health Sciences, Tel Aviv University, Tel Aviv 6997801, Israel
- The Center for Nanoscience and Nanotechnology, Tel Aviv University, Tel Aviv 6997801, Israel
- The Center for the Physics and Chemistry of Living Systems, Tel Aviv University, Tel Aviv 6997801, Israel
| | - Livnat Afriat-Jurnou
- Migal-Galilee Research Institute, Kiryat Shmona 11016, Israel
- The Faculty of Sciences and Technology, Tel-Hai College, Upper Galilee 1220800, Israel
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Tacias-Pascacio VG, Castañeda-Valbuena D, Tavano O, Abellanas-Perez P, de Andrades D, Santiz-Gómez JA, Berenguer-Murcia Á, Fernandez-Lafuente R. A review on the immobilization of bromelain. Int J Biol Macromol 2024; 273:133089. [PMID: 38878936 DOI: 10.1016/j.ijbiomac.2024.133089] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/18/2024] [Revised: 05/21/2024] [Accepted: 06/09/2024] [Indexed: 06/24/2024]
Abstract
This review shows the endeavors performed to prepare immobilized formulations of bromelain extract, usually from pineapple, and their use in diverse applications. This extract has a potent proteolytic component that is based on thiol proteases, which differ depending on the location on the fruit. Stem and fruit are the areas where higher activity is found. The edible origin of this enzyme is one of the features that determines the applications of the immobilized bromelain to a more significant degree. The enzyme has been immobilized on a wide diversity of supports via different strategies (covalent bonds, ion exchange), and also forming ex novo solids (nanoflowers, CLEAs, trapping in alginate beads, etc.). The use of preexisting nanoparticles as immobilization supports is relevant, as this facilitates one of the main applications of the immobilized enzyme, in therapeutic applications (as wound dressing and healing components, antibacterial or anticancer, mucus mobility control, etc.). A curiosity is the immobilization of this enzyme on spores of probiotic microorganisms via adsorption, in order to have a perfect in vivo compatibility. Other outstanding applications of the immobilized enzyme are in the stabilization of wine versus haze during storage, mainly when immobilized on chitosan. Curiously, the immobilized bromelain has been scarcely applied in the production of bioactive peptides.
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Affiliation(s)
- Veymar G Tacias-Pascacio
- Facultad de Ciencias de la Nutrición y Alimentos, Universidad de Ciencias y Artes de Chiapas, Lib. Norte Pte. 1150, 29039 Tuxtla Gutiérrez, Chiapas, Mexico.
| | - Daniel Castañeda-Valbuena
- Facultad de Ciencias de la Nutrición y Alimentos, Universidad de Ciencias y Artes de Chiapas, Lib. Norte Pte. 1150, 29039 Tuxtla Gutiérrez, Chiapas, Mexico
| | - Olga Tavano
- Faculty of Nutrition, Alfenas Federal Univ., 700 Gabriel Monteiro da Silva St, Alfenas, MG 37130-000, Brazil
| | | | - Diandra de Andrades
- Departamento de Biocatálisis, ICP-CSIC, Campus UAM-CSIC, Madrid, Spain; Department of Biology, Faculty of Philosophy, Sciences and Letters of Ribeirão Preto, University of São Paulo, Ribeirão Preto 14040-901, SP, Brazil
| | - José Alfredo Santiz-Gómez
- Tecnológico Nacional de México/Instituto Tecnológico de Tuxtla Gutiérrez, Carretera Panamericana Km. 1080, 29050 Tuxtla Gutiérrez, Chiapas, Mexico
| | - Ángel Berenguer-Murcia
- Departamento de Química Inorgánica e Instituto Universitario de Materiales, Universidad de Alicante, Alicante, Spain
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20
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Gama Cavalcante AL, Dari DN, Izaias da Silva Aires F, Carlos de Castro E, Moreira Dos Santos K, Sousa Dos Santos JC. Advancements in enzyme immobilization on magnetic nanomaterials: toward sustainable industrial applications. RSC Adv 2024; 14:17946-17988. [PMID: 38841394 PMCID: PMC11151160 DOI: 10.1039/d4ra02939a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2024] [Accepted: 05/27/2024] [Indexed: 06/07/2024] Open
Abstract
Enzymes are widely used in biofuels, food, and pharmaceuticals. The immobilization of enzymes on solid supports, particularly magnetic nanomaterials, enhances their stability and catalytic activity. Magnetic nanomaterials are chosen for their versatility, large surface area, and superparamagnetic properties, which allow for easy separation and reuse in industrial processes. Researchers focus on the synthesis of appropriate nanomaterials tailored for specific purposes. Immobilization protocols are predefined and adapted to both enzymes and support requirements for optimal efficiency. This review provides a detailed exploration of the application of magnetic nanomaterials in enzyme immobilization protocols. It covers methods, challenges, advantages, and future perspectives, starting with general aspects of magnetic nanomaterials, their synthesis, and applications as matrices for solid enzyme stabilization. The discussion then delves into existing enzymatic immobilization methods on magnetic nanomaterials, highlighting advantages, challenges, and potential applications. Further sections explore the industrial use of various enzymes immobilized on these materials, the development of enzyme-based bioreactors, and prospects for these biocatalysts. In summary, this review provides a concise comparison of the use of magnetic nanomaterials for enzyme stabilization, highlighting potential industrial applications and contributing to manufacturing optimization.
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Affiliation(s)
- Antônio Luthierre Gama Cavalcante
- Departamento de Química Orgânica e Inorgânica, Centro de Ciências, Universidade Federal do Ceará Campus Pici Fortaleza CEP 60455760 CE Brazil
| | - Dayana Nascimento Dari
- Instituto de Engenharias e Desenvolvimento Sustentável, Universidade da Integração Internacional da Lusofonia Afro-Brasileira Campus das Auroras Redenção CEP 62790970 CE Brazil
| | - Francisco Izaias da Silva Aires
- Instituto de Engenharias e Desenvolvimento Sustentável, Universidade da Integração Internacional da Lusofonia Afro-Brasileira Campus das Auroras Redenção CEP 62790970 CE Brazil
| | - Erico Carlos de Castro
- Departamento de Química Orgânica e Inorgânica, Centro de Ciências, Universidade Federal do Ceará Campus Pici Fortaleza CEP 60455760 CE Brazil
| | - Kaiany Moreira Dos Santos
- Instituto de Engenharias e Desenvolvimento Sustentável, Universidade da Integração Internacional da Lusofonia Afro-Brasileira Campus das Auroras Redenção CEP 62790970 CE Brazil
| | - José Cleiton Sousa Dos Santos
- Departamento de Química Orgânica e Inorgânica, Centro de Ciências, Universidade Federal do Ceará Campus Pici Fortaleza CEP 60455760 CE Brazil
- Instituto de Engenharias e Desenvolvimento Sustentável, Universidade da Integração Internacional da Lusofonia Afro-Brasileira Campus das Auroras Redenção CEP 62790970 CE Brazil
- Departamento de Química Analítica e Físico-Química, Universidade Federal do Ceará Campus do Pici, Bloco 940 Fortaleza CEP 60455760 CE Brazil
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21
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Liu Y, Cui S, Ma W, Wu Y, Xin R, Bai Y, Chen Z, Xu J, Ge J. Direct Imaging of Protein Clusters in Metal-Organic Frameworks. J Am Chem Soc 2024; 146:12565-12576. [PMID: 38661569 DOI: 10.1021/jacs.4c01483] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/26/2024]
Abstract
Protein@metal-organic frameworks (P@MOFs) prepared by coprecipitation of protein, metal ions, and organic ligands represent an effective method for protein stabilization with a wide spectrum of applications. However, the formation mechanism of P@MOFs via the coprecipitation process and the reason why proteins can retain their biological activity in the frameworks with highly concentrated metal ions remain unsettled. Here, by a combined methodology of single molecule localization microscopy and clustering analysis, we discovered that in this process enzyme molecules form clusters with metal ions and organic ligands, contributing to both the nucleation and subsequent crystal growth. We proposed that the clusters played an important role in the retention of overall enzymatic activity by sacrificing protein molecules on the cluster surface. This work offers fresh perspectives on protein behaviors in the formation of P@MOFs, inspiring future endeavors in the design and development of artificial bionanocomposites with high biological activities.
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Affiliation(s)
- Yu Liu
- Key Lab for Industrial Biocatalysis, Ministry of Education, Department of Chemical Engineering, Tsinghua University, Beijing 100084, China
| | - Shitong Cui
- Key Lab for Industrial Biocatalysis, Ministry of Education, Department of Chemical Engineering, Tsinghua University, Beijing 100084, China
| | - Wenjun Ma
- The State Key Laboratory of Chemical Engineering, Department of Chemical Engineering, Tsinghua University, Beijing 100084, China
| | - Yibo Wu
- Key Lab for Industrial Biocatalysis, Ministry of Education, Department of Chemical Engineering, Tsinghua University, Beijing 100084, China
| | - Ruobing Xin
- Key Lab for Industrial Biocatalysis, Ministry of Education, Department of Chemical Engineering, Tsinghua University, Beijing 100084, China
| | - Yunxiu Bai
- Key Lab for Industrial Biocatalysis, Ministry of Education, Department of Chemical Engineering, Tsinghua University, Beijing 100084, China
| | - Zhuo Chen
- The State Key Laboratory of Chemical Engineering, Department of Chemical Engineering, Tsinghua University, Beijing 100084, China
| | - Jianhong Xu
- The State Key Laboratory of Chemical Engineering, Department of Chemical Engineering, Tsinghua University, Beijing 100084, China
| | - Jun Ge
- Key Lab for Industrial Biocatalysis, Ministry of Education, Department of Chemical Engineering, Tsinghua University, Beijing 100084, China
- Institute of Biopharmaceutical and Health Engineering, Tsinghua Shenzhen International Graduate School, Shenzhen 518055, China
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22
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Zhou H, Fang Y, Zhang J, Xiong T, Peng F. Site-directed immobilization of enzymes on nanoparticles using self-assembly systems. BIORESOURCE TECHNOLOGY 2024; 397:130505. [PMID: 38423485 DOI: 10.1016/j.biortech.2024.130505] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/06/2024] [Revised: 02/26/2024] [Accepted: 02/26/2024] [Indexed: 03/02/2024]
Abstract
Enzyme immobilization is an effective method for improving the stability and reusability. However, linking at random sites on the enzyme results in low catalytic efficiency due to blockage of the active site or conformational changes. Therefore, controlling the orientation of enzymes on the carrier has been developed. Here, the site-specific mutation and the SpyTag/SpyCatcher systems were used to prepare a site-directed immobilized enzyme. The thermal stability of the immobilized enzyme was better than that of the free enzyme, and ≥80 % of the catalytic activity was retained after 30 days of storage. Furthermore, the Michaelis constant (Km) and the turnover number (kcat) of the immobilized enzyme were 5.23-fold lower and 6.11-fold higher than those of the free enzyme, respectively, which appeared to be related to changes in secondary structure after immobilization. These findings provide a new and effective option for enzyme-directed immobilization.
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Affiliation(s)
- Haili Zhou
- School of Food Science and Technology, Nanchang University, No. 235 Nanjing East Road, Nanchang, Jiangxi 330047, China
| | - Yuling Fang
- School of Food Science and Technology, Nanchang University, No. 235 Nanjing East Road, Nanchang, Jiangxi 330047, China
| | - Jing Zhang
- School of Food Science and Technology, Nanchang University, No. 235 Nanjing East Road, Nanchang, Jiangxi 330047, China
| | - Tao Xiong
- School of Food Science and Technology, Nanchang University, No. 235 Nanjing East Road, Nanchang, Jiangxi 330047, China; State Key Laboratory of Food Science and Resources, Nanchang University, No. 235 Nanjing East Road, Nanchang, Jiangxi 330047, China
| | - Fei Peng
- School of Food Science and Technology, Nanchang University, No. 235 Nanjing East Road, Nanchang, Jiangxi 330047, China; State Key Laboratory of Food Science and Resources, Nanchang University, No. 235 Nanjing East Road, Nanchang, Jiangxi 330047, China.
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23
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Monteiro RRC, de Melo Neta MMF, Rocha WS, Soares JB, de Luna FMT, Fernandez-Lafuente R, Vieira RS. Optimizing the enzymatic production of biolubricants by the Taguchi method: Esterification of the free fatty acids from castor oil with 2-ethyl-1-hexanol catalyzed by Eversa Transform 2.0. Enzyme Microb Technol 2024; 175:110409. [PMID: 38335559 DOI: 10.1016/j.enzmictec.2024.110409] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/16/2023] [Revised: 01/26/2024] [Accepted: 02/01/2024] [Indexed: 02/12/2024]
Abstract
The solvent-free esterification of the free fatty acids (FFAs) obtained by the hydrolysis of castor oil (a non-edible vegetable oil) with 2-ethyl-1-hexanol (a branched fatty alcohol) was catalyzed by different free lipases. Eversa Transform 2.0 (ETL) features surpassed most commercial lipases. Some process parameters were optimized by the Taguchi method (L16'). As a result, a conversion over 95% of the FFAs of castor oil into esters with lubricants properties was achieved under optimized reaction conditions (15 wt% of biocatalyst content, 1:4 molar ratio (FFAs/alcohol), 30 °C, 180 rpm, 96 h). The substrates molar ratio had the highest influence on the dependent variable (conversion at 24 h). FFAs/2-ethyl-1-hexanol esters were characterized regarding the physicochemical and tribological properties. Interestingly, the modification of the FFAs with 2-ethyl-1-hexanol by ETL increased the oxidative stability of the FFAs feedstock from 0.18 h to 16.83 h. The biolubricants presented a lower friction coefficient than the reference commercial mineral lubricant (0.052 ± 0.07 against 0.078 ± 0.04). Under these conditions, ETL catalyzed the oligomerization of ricinoleic acid (a hydroxyl fatty acid) into estolides, reaching a conversion of 25.15% of the initial FFAs (for the first time).
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Affiliation(s)
- Rodolpho R C Monteiro
- Departamento de Engenharia Química, Universidade Federal do Ceará, Campus do Pici, 60455760 Fortaleza, Brazil
| | - Maria M F de Melo Neta
- Departamento de Engenharia Mecânica, Universidade Federal do Ceará, Campus do Pici, 60455760 Fortaleza, Brazil
| | - Wesley S Rocha
- Departamento de Engenharia Química, Universidade Federal do Ceará, Campus do Pici, 60455760 Fortaleza, Brazil
| | - Jorge B Soares
- Departamento de Engenharia de Transportes, Universidade Federal do Ceará, Campus do Pici, 60455760 Fortaleza, Brazil
| | - F Murilo T de Luna
- Departamento de Engenharia Química, Universidade Federal do Ceará, Campus do Pici, 60455760 Fortaleza, Brazil; Departamento de Engenharia Mecânica, Universidade Federal do Ceará, Campus do Pici, 60455760 Fortaleza, Brazil
| | | | - Rodrigo S Vieira
- Departamento de Engenharia Química, Universidade Federal do Ceará, Campus do Pici, 60455760 Fortaleza, Brazil.
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24
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Ateş B, Ulu A, Asiltürk M, Noma SAA, Topel SD, Dik G, Özhan O, Bakar B, Yıldız A, Vardı N, Parlakpınar H. Enhancement of enzyme activity by laser-induced energy propulsion of upconverting nanoparticles under near-infrared light: A comprehensive methodology for in vitro and in vivo applications. Int J Biol Macromol 2024; 260:129343. [PMID: 38242401 DOI: 10.1016/j.ijbiomac.2024.129343] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/21/2023] [Revised: 01/05/2024] [Accepted: 01/07/2024] [Indexed: 01/21/2024]
Abstract
If the appropriate immobilization method and carrier support are not selected, partial decreases in the activity of enzymes may occur after immobilization. Herein, to overcome this challenge, an excitation mechanism that enables energy transfer was proposed. Modified upconverting nanoparticles (UCNPs) were constructed and the important role of near-infrared (NIR) excitation in enhancing the catalytic activity of the enzyme was demonstrated. For this purpose, UCNPs were first synthesized via the hydrothermal method, functionalized with isocyanate groups, and then, PEG-L-ASNase was immobilized via covalent binding. UCNPs with and without PEG-L-ASNase were extensively characterized by different methods. These supports had immobilization yield and activity efficiency of >96 % and 78 %, respectively. Moreover, immobilized enzymes exhibited improved pH, thermal, and storage stability. In addition, they retained >65 % of their initial activity even after 20 catalytic cycles. Biochemical and histological findings did not indicate a trend of toxicity in rats due to UCNPs. Most importantly, PEG-L-ASNase activity was triggered approximately 5- and 2-fold under in vitro and in vivo conditions, respectively. Overall, it is anticipated that this pioneering work will shed new light on the realistic and promising usage of NIR-excited UCNPs for the immobilization of enzymes in expensive and extensive applications.
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Affiliation(s)
- Burhan Ateş
- Biochemistry and Biomaterials Research Laboratory, Department of Chemistry, Faculty of Arts and Science, İnönü University, 44280 Malatya, Türkiye.
| | - Ahmet Ulu
- Biochemistry and Biomaterials Research Laboratory, Department of Chemistry, Faculty of Arts and Science, İnönü University, 44280 Malatya, Türkiye.
| | - Meltem Asiltürk
- Department of Material Science and Engineering, Faculty of Engineering, Akdeniz University, 07070 Antalya, Türkiye
| | - Samir Abbas Ali Noma
- Biochemistry and Biomaterials Research Laboratory, Department of Chemistry, Faculty of Arts and Science, İnönü University, 44280 Malatya, Türkiye; Department of Chemistry, Faculty of Arts and Science, Bursa Uludag University, Bursa, Türkiye
| | - Seda Demirel Topel
- Department of Electrical and Electronics Engineering, Faculty of Engineering, Antalya Bilim University, 07190 Antalya, Türkiye
| | - Gamze Dik
- Biochemistry and Biomaterials Research Laboratory, Department of Chemistry, Faculty of Arts and Science, İnönü University, 44280 Malatya, Türkiye
| | - Onural Özhan
- Department of Medicinal Pharmacology, Medical Faculty, İnönü University, 44210 Malatya, Türkiye
| | - Büşra Bakar
- Biochemistry and Biomaterials Research Laboratory, Department of Chemistry, Faculty of Arts and Science, İnönü University, 44280 Malatya, Türkiye
| | - Azibe Yıldız
- Department of Histology and Embryology, Medical Faculty, İnönü University, 44210 Malatya, Türkiye
| | - Nigar Vardı
- Department of Histology and Embryology, Medical Faculty, İnönü University, 44210 Malatya, Türkiye
| | - Hakan Parlakpınar
- Department of Medicinal Pharmacology, Medical Faculty, İnönü University, 44210 Malatya, Türkiye
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25
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Zhang H, Ye YH, Wang Y, Liu JZ, Jiao QC. A Bibliometric Analysis: Current Perspectives and Potential Trends of Enzyme Thermostability from 1991-2022. Appl Biochem Biotechnol 2024; 196:1211-1240. [PMID: 37382790 DOI: 10.1007/s12010-023-04615-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 06/19/2023] [Indexed: 06/30/2023]
Abstract
Thermostability is considered a crucial parameter to evaluate the viability of enzymes in industrial applications. Over the past 31 years, many studies have been reported on the thermostability of enzymes. However, there is no systematic bibliometric analysis of publications on the thermostability of enzymes. In this study, 16,035 publications related to the thermostability of enzymes were searched and collected, showing an increasing annual trend. China contributed the most publications, while the United States had the highest citation count. International Journal of Biological Macromolecules is the most productive journal in the research field. Moreover, Chinese acad sci and Khosro Khajeh are the most active institutions and prolific authors in the field, respectively. Analysis of references with the strongest citation bursts and keyword co-occurrences, magnetic nanoparticles, metal-organic frameworks, molecular dynamics, and rational design are current hot spots and significant future research directions. This study is the first comprehensive bibliometric analysis summarizing trends and developments in enzyme thermostability research. Our findings could provide scholars with an understanding of the fundamental knowledge framework of the field and identify recent potential hotspots and research trends that could facilitate the discovery of collaboration opportunities.
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Affiliation(s)
- Heng Zhang
- State Key Laboratory of Pharmaceutical Biotechnology, School of Life Sciences, Nanjing University, Nanjing, 210023, China
| | - Yun-Hui Ye
- State Key Laboratory of Pharmaceutical Biotechnology, School of Life Sciences, Nanjing University, Nanjing, 210023, China
| | - Yu Wang
- State Key Laboratory of Pharmaceutical Biotechnology, School of Life Sciences, Nanjing University, Nanjing, 210023, China
| | - Jun-Zhong Liu
- Nanjing Institute for Comprehensive Utilization of Wild Plants, CHINA CO-OP, Nanjing, 211111, China.
| | - Qing-Cai Jiao
- State Key Laboratory of Pharmaceutical Biotechnology, School of Life Sciences, Nanjing University, Nanjing, 210023, China.
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26
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Rossato LAM, Morsali M, Ruffini E, Bertuzzi P, Serra S, D'Arrigo P, Sipponen M. Phospholipase D Immobilization on Lignin Nanoparticles for Enzymatic Transformation of Phospholipids. CHEMSUSCHEM 2024; 17:e202300803. [PMID: 37801034 DOI: 10.1002/cssc.202300803] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/07/2023] [Revised: 09/08/2023] [Accepted: 10/05/2023] [Indexed: 10/07/2023]
Abstract
Lignin nanoparticles (LNPs) are promising components for various materials, given their controllable particle size and spherical shape. However, their origin from supramolecular aggregation has limited the applicability of LNPs as recoverable templates for immobilization of enzymes. In this study, we show that stabilized LNPs are highly promising for the immobilization of phospholipase D (PLD), the enzyme involved in the biocatalytic production of high-value polar head modified phospholipids of commercial interest, phosphatidylglycerol, phosphatidylserine and phosphatidylethanolamine. Starting from hydroxymethylated lignin, LNPs were prepared and successively hydrothermally treated to obtain c-HLNPs with high resistance to organic solvents and a wide range of pH values, covering the conditions for enzymatic reactions and enzyme recovery. The immobilization of PLD on c-HLNPs (PLD-c-HLNPs) was achieved through direct adsorption. We then successfully exploited this new enzymatic preparation in the preparation of pure polar head modified phospholipids with high yields (60-90 %). Furthermore, the high stability of PLD-c-HLNPs allows recycling for a number of reactions with appreciable maintenance of its catalytic activity. Thus, PLD-c-HLNPs can be regarded as a new, chemically stable, recyclable and user-friendly biocatalyst, based on a biobased inexpensive scaffold, to be employed in sustainable chemical processes for synthesis of value-added phospholipids.
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Affiliation(s)
- Letizia Anna Maria Rossato
- Department of Chemistry, Materials and Chemical Engineering "Giulio Natta", Politecnico di Milano, piazza L. da Vinci 32, Milano, 20133, Milan, Italy
| | - Mohammad Morsali
- Department of Materials and Environmental Chemistry, Stockholm University, Svante Arrhenius väg 16C, SE-10691, Stockholm, Sweden
- Wallenberg Wood Science Center, Department of Materials and Environmental Chemistry, Stockholm University, SE-, 10691, Stockholm, Sweden
| | - Eleonora Ruffini
- Department of Chemistry, Materials and Chemical Engineering "Giulio Natta", Politecnico di Milano, piazza L. da Vinci 32, Milano, 20133, Milan, Italy
| | - Pietro Bertuzzi
- Department of Chemistry, Materials and Chemical Engineering "Giulio Natta", Politecnico di Milano, piazza L. da Vinci 32, Milano, 20133, Milan, Italy
| | - Stefano Serra
- Instituto di Scienze e Tecnologie Chimiche "Giulio Natta", Consiglio Nazionale delle Ricerche (SCITEC-CNR), via Luigi Mancinelli 7, Milano, 20131, Italy
| | - Paola D'Arrigo
- Department of Chemistry, Materials and Chemical Engineering "Giulio Natta", Politecnico di Milano, piazza L. da Vinci 32, Milano, 20133, Milan, Italy
- Instituto di Scienze e Tecnologie Chimiche "Giulio Natta", Consiglio Nazionale delle Ricerche (SCITEC-CNR), via Luigi Mancinelli 7, Milano, 20131, Italy
| | - Mika Sipponen
- Department of Materials and Environmental Chemistry, Stockholm University, Svante Arrhenius väg 16C, SE-10691, Stockholm, Sweden
- Wallenberg Wood Science Center, Department of Materials and Environmental Chemistry, Stockholm University, SE-, 10691, Stockholm, Sweden
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27
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Yin Q, Batbatan CG, Li Y, Zhang Y, Yang Q, Xiao A. Preparation and Characterization of Carrageenase Immobilized onto Polyethyleneimine-Modified Pomelo Peel. J Microbiol Biotechnol 2024; 34:132-140. [PMID: 37957113 PMCID: PMC10840462 DOI: 10.4014/jmb.2304.04029] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2023] [Revised: 06/03/2023] [Accepted: 06/07/2023] [Indexed: 11/15/2023]
Abstract
In this study, carrageenase immobilization was evaluated with a concise and efficient strategy. Pomelo peel cellulose (PPC) modified by polyethyleneimine (PEI) using the physical absorption method was used as a carrier to immobilize carrageenase and achieved repeated batch catalysis. In addition, various immobilization and reaction parameters were scrutinized to enhance the immobilization efficiency. Under the optimized conditions, the enzyme activity recovery rate was more than 50% and 4.1 times higher than immobilization with non-modified pomelo peels. The optimum temperature and pH of carrageenase after immobilization by PEI-modified pomelo peel, at 60°C and 7.5 respectively, were in line with the free enzyme. The temperature resistance was reduced, inconsistent with free enzyme, and pH resistance was increased. A significant loss of activity (46.8%) was observed after reusing it thrice under optimal reaction conditions. In terms of stability, the immobilized enzyme conserved 76.0% of the initial enzyme activity after 98 days of storage. Furthermore, a modest decrease in the kinetic constant (Km) value was observed, indicating the improved substrate affinity of the immobilized enzyme. Therefore, modified pomelo peel is a verified and promising enzyme immobilization system for the synthesis of inorganic solvents.
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Affiliation(s)
- Qin Yin
- College of Biological and Food Engineering, Suzhou University, Suzhou, Anhui, 234000, P.R. China
- Department of Biology, Central Mindanao University, Maramag, Bukidnon, 8710, Philippines
| | | | - Yongxing Li
- College of Ocean Food and Biological Engineering, Jimei University, Xiamen, Fujian, 361021, P.R. China
| | - Yonghui Zhang
- College of Ocean Food and Biological Engineering, Jimei University, Xiamen, Fujian, 361021, P.R. China
| | - Qiuming Yang
- College of Ocean Food and Biological Engineering, Jimei University, Xiamen, Fujian, 361021, P.R. China
| | - Anfeng Xiao
- College of Ocean Food and Biological Engineering, Jimei University, Xiamen, Fujian, 361021, P.R. China
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28
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Abellanas-Perez P, Carballares D, Rocha-Martin J, Fernandez-Lafuente R. The effects of the chemical modification on immobilized lipase features are affected by the enzyme crowding in the support. Biotechnol Prog 2024; 40:e3394. [PMID: 37828788 DOI: 10.1002/btpr.3394] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2023] [Revised: 08/07/2023] [Accepted: 09/22/2023] [Indexed: 10/14/2023]
Abstract
In this article, we have analyzed the interactions between enzyme crowding on a given support and its chemical modification (ethylenediamine modification via the carbodiimide route and picryl sulfonic (TNBS) modification of the primary amino groups) on the enzyme activity and stability. Lipase from Thermomyces lanuginosus (TLL) and lipase B from Candida antarctica (CALB) were immobilized on octyl-agarose beads at two very different enzyme loadings, one of them exceeding the capacity of the support, one well under this capacity. Chemical modifications of the highly loaded and lowly loaded biocatalysts gave very different results in terms of activity and stability, which could increase or decrease enzyme activity depending on the enzyme support loading. For example, both lowly loaded biocatalysts increased their activity after modification while the effect was the opposite for the highly loaded biocatalysts. Additionally, the modification with TNBS of highly loaded CALB biocatalyst increased its stability while decrease the activity.
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Affiliation(s)
| | - Diego Carballares
- Departamento de Biocatálisis, ICP-CSIC, Campus UAM-CSIC, Madrid, Spain
| | - Javier Rocha-Martin
- Department of Biochemistry and Molecular Biology, Faculty of Biology, Complutense University of Madrid, Madrid, Spain
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29
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Hu X, Liu W, Yan Y, Deng H, Cai Y. Development of a novel magnetic metal-organic framework for the immobilization of short-chain dehydrogenase for the asymmetric reduction of pro-chiral ketone. Int J Biol Macromol 2023; 253:127414. [PMID: 37838135 DOI: 10.1016/j.ijbiomac.2023.127414] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2023] [Revised: 10/07/2023] [Accepted: 10/10/2023] [Indexed: 10/16/2023]
Abstract
Short-chain dehydrogenase/reductase (SDR) acts as a biocatalyst in the synthesis of chiral alcohols with high optical purity. Herein, we achieved immobilization via crosslinking on novel magnetic metal-organic framework nanoparticles with a three-layer shell structure (Fe3O4@PDA@Cu (PABA)). The results of scanning electron microscopy, Fourier-transform infrared spectroscopy, X-ray diffraction, X-ray photoelectron spectroscopy, and energy dispersive X-ray spectroscopy confirmed the morphology and cross-linking property of immobilized SDR, which was more durable, stable, and reusable and exhibited better kinetic performance than free enzyme. The SDR and glucose dehydrogenase (GDH) were co-immobilized and then used for the asymmetric reduction of COBE and ethyl 2-oxo-4-phenylbutanoate (OPBE). These finding suggest that enzymes immobilized on novel MOF nanoparticles can serve as promising biocatalysts for asymmetric reduction prochiral ketones into chiral alcohols.
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Affiliation(s)
- Xiaoxiang Hu
- The Key Laboratory of Industrial Biotechnology, Ministry of Education, School of Biotechnology, Jiangnan University, 1800 Lihu Road, Wuxi, Jiangsu 214122, China
| | - Wenjing Liu
- The Key Laboratory of Industrial Biotechnology, Ministry of Education, School of Biotechnology, Jiangnan University, 1800 Lihu Road, Wuxi, Jiangsu 214122, China
| | - Yi Yan
- The Key Laboratory of Industrial Biotechnology, Ministry of Education, School of Biotechnology, Jiangnan University, 1800 Lihu Road, Wuxi, Jiangsu 214122, China
| | - Huaxiang Deng
- Center for Synthetic Biochemistry, Institute of Synthetic Biology, Institutes of Advanced Technologies, Shenzhen, China
| | - Yujie Cai
- The Key Laboratory of Industrial Biotechnology, Ministry of Education, School of Biotechnology, Jiangnan University, 1800 Lihu Road, Wuxi, Jiangsu 214122, China.
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30
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Kanprakobkit W, Wichai U, Bunyapraphatsara N, Kielar F. Isolation of Fatty Acids from the Enzymatic Hydrolysis of Capsaicinoids and Their Use in Enzymatic Acidolysis of Coconut Oil. J Oleo Sci 2023; 72:1097-1111. [PMID: 37989304 DOI: 10.5650/jos.ess23112] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2023] Open
Abstract
Herein we report the optimization of enzymatic hydrolysis of a mixture of capsaicinoids, capsaicin and dihydrocapsaicin obtained from chili peppers, and the utilization of the isolated fatty acids for the modification of coconut oil using enzyme catalyzed acidolysis. This work was carried out as the fatty acids that can be isolated from capsaicinoid hydrolysis have been shown to possess interesting biological properties. These biological properties could be better exploited by incorporating the fatty acids into a suitable delivery vehicle. The enzymatic hydrolysis of the mixture of capsaicin and dihydrocapsaicin was carried out using Novozym® 435 in phosphate buffer (pH 7.0) at 50℃. The enzyme catalyst could be reused in multiple cycles of the hydrolysis reaction. The desired 8-methyl-6-trans-nonenoic acid and 8-methylnonanoic acid were isolated from the hydrolysis reaction mixture using a simple extraction procedure with a 47.8% yield. This was carried out by first extracting the reaction mixture at pH 10 with ethyl acetate to remove any dissolved capsaicinoids and vanillyl amine side product. The fatty acids were isolated after adjustment of the pH of the reaction mixture to 5 and second extraction with ethyl acetate. The acidolysis of coconut oil with the obtained fatty acids was performed using Lipozyme® TL IM. The performance of the acidolysis reaction was evaluated using 1H-NMR spectroscopy and verified in selected cases using gas chromatography. The best performing conditions involved carrying out the acidolysis reaction at 60℃ with a 1.2 w/w ratio of the fatty acids to coconut oil and 10% enzyme loading for 72 h. This resulted in the incorporation of 26.61% and 9.86% of 8-methyl-6-trans-nonenoic acid and 8-methylnonanoic acid, respectively, into the modified coconut oil product. This product can act as a potential delivery vehicle for these interesting compounds.
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Affiliation(s)
- Winranath Kanprakobkit
- Department of Chemistry and Center of Excellence in Biomaterials, Faculty of Science, Naresuan University
| | - Uthai Wichai
- Department of Chemistry and Center of Excellence in Biomaterials, Faculty of Science, Naresuan University
| | | | - Filip Kielar
- Department of Chemistry and Center of Excellence in Biomaterials, Faculty of Science, Naresuan University
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31
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Xu C, Tong S, Sun L, Gu X. Cellulase immobilization to enhance enzymatic hydrolysis of lignocellulosic biomass: An all-inclusive review. Carbohydr Polym 2023; 321:121319. [PMID: 37739542 DOI: 10.1016/j.carbpol.2023.121319] [Citation(s) in RCA: 23] [Impact Index Per Article: 11.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/03/2023] [Revised: 08/15/2023] [Accepted: 08/20/2023] [Indexed: 09/24/2023]
Abstract
Cellulase-mediated lignocellulosic biorefinery plays a crucial role in the production of high-value biofuels and chemicals, with enzymatic hydrolysis being an essential component. The advent of cellulase immobilization has revolutionized this process, significantly enhancing the efficiency, stability, and reusability of cellulase enzymes. This review offers a thorough analysis of the fundamental principles underlying immobilization, encompassing various immobilization approaches such as physical adsorption, covalent binding, entrapment, and cross-linking. Furthermore, it explores a diverse range of carrier materials, including inorganic, organic, and hybrid/composite materials. The review also focuses on emerging approaches like multi-enzyme co-immobilization, oriented immobilization, immobilized enzyme microreactors, and enzyme engineering for immobilization. Additionally, it delves into novel carrier technologies like 3D printing carriers, stimuli-responsive carriers, artificial cellulosomes, and biomimetic carriers. Moreover, the review addresses recent obstacles in cellulase immobilization, including molecular-level immobilization mechanism, diffusion limitations, loss of cellulase activity, cellulase leaching, and considerations of cost-effectiveness and scalability. The knowledge derived from this review is anticipated to catalyze the evolution of more efficient and sustainable biocatalytic systems for lignocellulosic biomass conversion, representing the current state-of-the-art in cellulase immobilization techniques.
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Affiliation(s)
- Chaozhong Xu
- Jiangsu Co-Innovation Center of Efficient Processing and Utilization of Forest Resources, College of Chemical Engineering, Nanjing Forestry University, Nanjing 210037, PR China.
| | - Shanshan Tong
- Jiangsu Co-Innovation Center of Efficient Processing and Utilization of Forest Resources, College of Chemical Engineering, Nanjing Forestry University, Nanjing 210037, PR China
| | - Liqun Sun
- Jiangsu Co-Innovation Center of Efficient Processing and Utilization of Forest Resources, College of Chemical Engineering, Nanjing Forestry University, Nanjing 210037, PR China
| | - Xiaoli Gu
- Jiangsu Co-Innovation Center of Efficient Processing and Utilization of Forest Resources, College of Chemical Engineering, Nanjing Forestry University, Nanjing 210037, PR China.
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Hadley P, Chen Y, Cline L, Han Z, Tang Q, Huang X, Desai T. Precise surface functionalization of PLGA particles for human T cell modulation. Nat Protoc 2023; 18:3289-3321. [PMID: 37853157 PMCID: PMC10775953 DOI: 10.1038/s41596-023-00887-8] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2023] [Accepted: 07/05/2023] [Indexed: 10/20/2023]
Abstract
The biofunctionalization of synthetic materials has extensive utility for biomedical applications, but approaches to bioconjugation typically show insufficient efficiency and controllability. We recently developed an approach by building synthetic DNA scaffolds on biomaterial surfaces that enables the precise control of cargo density and ratio, thus improving the assembly and organization of functional cargos. We used this approach to show that the modulation and phenotypic adaptation of immune cells can be regulated using our precisely functionalized biomaterials. Here, we describe the three key procedures, including the fabrication of polymeric particles engrafted with short DNA scaffolds, the attachment of functional cargos with complementary DNA strands, and the surface assembly control and quantification. We also explain the critical checkpoints needed to ensure the overall quality and expected characteristics of the biological product. We provide additional experimental design considerations for modifying the approach by varying the material composition, size or cargo types. As an example, we cover the use of the protocol for human primary T cell activation and for the identification of parameters that affect ex vivo T cell manufacturing. The protocol requires users with diverse expertise ranging from synthetic materials to bioconjugation chemistry to immunology. The fabrication procedures and validation assays to design high-fidelity DNA-scaffolded biomaterials typically require 8 d.
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Affiliation(s)
- Pierce Hadley
- Medical Scientist Training Program, University of California, San Francisco, CA, USA
- UC Berkeley-UCSF Graduate Program in Bioengineering, UCSF Mission Bay Campus, San Francisco, CA, USA
- Department of Bioengineering and Therapeutic Sciences, University of California, San Francisco, CA, USA
- Diabetes Center, University of California, San Francisco, CA, USA
- Gladstone-UCSF Institute of Genomic Immunology, San Francisco, CA, USA
| | - Yuanzhou Chen
- Department of Bioengineering and Therapeutic Sciences, University of California, San Francisco, CA, USA
- Cell Design Institute and Center for Synthetic Immunology, University of California, San Francisco, CA, USA
| | - Lariana Cline
- Department of Bioengineering and Therapeutic Sciences, University of California, San Francisco, CA, USA
| | - Zhiyuan Han
- Department of Bioengineering and Therapeutic Sciences, University of California, San Francisco, CA, USA
| | - Qizhi Tang
- Diabetes Center, University of California, San Francisco, CA, USA
- Gladstone-UCSF Institute of Genomic Immunology, San Francisco, CA, USA
- Department of Surgery, University of California, San Francisco, CA, USA
| | - Xiao Huang
- Department of Bioengineering and Therapeutic Sciences, University of California, San Francisco, CA, USA.
- Cell Design Institute and Center for Synthetic Immunology, University of California, San Francisco, CA, USA.
- School of Biomedical Engineering, Science and Health Systems, Drexel University, Philadelphia, PA, USA.
| | - Tejal Desai
- UC Berkeley-UCSF Graduate Program in Bioengineering, UCSF Mission Bay Campus, San Francisco, CA, USA.
- Department of Bioengineering and Therapeutic Sciences, University of California, San Francisco, CA, USA.
- Diabetes Center, University of California, San Francisco, CA, USA.
- Cell Design Institute and Center for Synthetic Immunology, University of California, San Francisco, CA, USA.
- School of Engineering, Brown University, Providence, RI, USA.
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Zhou X, Gao M, De X, Sun T, Bai Z, Luo J, Wang F, Ge J. Bacterium-like particles derived from probiotics: progress, challenges and prospects. Front Immunol 2023; 14:1263586. [PMID: 37868963 PMCID: PMC10587609 DOI: 10.3389/fimmu.2023.1263586] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2023] [Accepted: 09/22/2023] [Indexed: 10/24/2023] Open
Abstract
Bacterium-like particles (BLPs) are hollow peptidoglycan particles obtained from food-grade Lactococcus lactis inactivated by hot acid. With the advantage of easy preparation, high safety, great stability, high loading capacity, and high mucosal delivery efficiency, BLPs can load and display proteins on the surface with the help of protein anchor (PA), making BLPs a proper delivery system. Owning to these features, BLPs are widely used in the development of adjuvants, vaccine carriers, virus/antigens purification, and enzyme immobilization. This review has attempted to gather a full understanding of the technical composition, characteristics, applications. The mechanism by which BLPs induces superior adaptive immune responses is also discussed. Besides, this review tracked the latest developments in the field of BLPs, including Lactobacillus-derived BLPs and novel anchors. Finally, the main limitations and proposed breakthrough points to further enhance the immunogenicity of BLPs vaccines were discussed, providing directions for future research. We hope that further developments in the field of antigen delivery of subunit vaccines or others will benefit from BLPs.
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Affiliation(s)
- Xinyao Zhou
- College of Veterinary Medicine, Northeast Agricultural University, Harbin, China
| | - Mingchun Gao
- College of Veterinary Medicine, Northeast Agricultural University, Harbin, China
| | - Xinqi De
- College of Veterinary Medicine, Northeast Agricultural University, Harbin, China
| | - Tong Sun
- College of Veterinary Medicine, Northeast Agricultural University, Harbin, China
| | - Zhikun Bai
- School of Basic Medical Sciences, Youjiang Medical University for Nationalities, Baise, China
| | - Jilong Luo
- College of Veterinary Medicine, Northeast Agricultural University, Harbin, China
| | - Fang Wang
- State Key Laboratory of Veterinary Biotechnology, Harbin Veterinary Research Institute, The Chinese Academy of Agricultural Sciences, Harbin, China
| | - Junwei Ge
- College of Veterinary Medicine, Northeast Agricultural University, Harbin, China
- Heilongjiang Provincial Key Laboratory of Zoonosis, Harbin, China
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Anwar A, Imran M, Iqbal HM. Smart chemistry and applied perceptions of enzyme-coupled nano-engineered assemblies to meet future biocatalytic challenges. Coord Chem Rev 2023; 493:215329. [DOI: 10.1016/j.ccr.2023.215329] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2024]
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Jara Fornerod M, Alvarez-Fernandez A, Michalska M, Papakonstantinou I, Guldin S. Glucose Oxidase Loading in Ordered Porous Aluminosilicates: Exploring the Potential of Surface Modification for Electrochemical Glucose Sensing. CHEMISTRY OF MATERIALS : A PUBLICATION OF THE AMERICAN CHEMICAL SOCIETY 2023; 35:7577-7587. [PMID: 37780408 PMCID: PMC10536975 DOI: 10.1021/acs.chemmater.3c01202] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/17/2023] [Revised: 08/22/2023] [Indexed: 10/03/2023]
Abstract
Enzymatic electrochemical sensors have become the leading glucose detection technology due to their rapid response, affordability, portability, selectivity, and sensitivity. However, the performance of these sensors is highly dependent on the surface properties of the electrode material used to store glucose oxidase and its ability to retain enzymatic activity under variable environmental conditions. Mesoporous thin films have recently attracted considerable attention as promising candidates for enzyme storage and activity preservation due to their well-defined nanoarchitecture and tunable surface properties. Herein, we systematically compare pathways for the immobilization of glucose oxidase (GOx) and their effectiveness in electrochemical glucose sensing, following modification protocols that lead to the electrostatic attraction (amino functionalization), covalent bonding (aldehyde functionalization), and electrostatic repulsion (oxygen plasma treatment) of the ordered porous aluminosilicate-coated electrodes. By direct comparison using a quartz crystal microbalance, we demonstrate that glucose oxidase can be loaded in a nanoarchitecture with a pore size of ∼50 nm and pore interconnections of ∼35 nm using the native aluminosilicate surface, as well as after amino or aldehyde surface modification, while oxygen plasma exposure of the native surface inhibits glucose oxidase loading. Despite a variety of routes for enzyme loading, quantitative electrochemical glucose sensing between 0 and 20 mM was only possible when the porous surface was functionalized with amino groups, which we relate to the role of surface chemistry in accessing the underlying substrate. Our results highlight the impact of rational surface modification on electrochemical biosensing performance and demonstrate the potential of tailoring porous nanoarchitecture surfaces for biosensing applications.
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Affiliation(s)
| | - Alberto Alvarez-Fernandez
- Department
of Chemical Engineering, University College
London, Torrington Place, London WC1E 7JE, U.K.
| | - Martyna Michalska
- Department
of Electronic & Electrical Engineering, University College London, Torrington Place, London WC1E 7JE, U.K.
| | - Ioannis Papakonstantinou
- Department
of Electronic & Electrical Engineering, University College London, Torrington Place, London WC1E 7JE, U.K.
| | - Stefan Guldin
- Department
of Chemical Engineering, University College
London, Torrington Place, London WC1E 7JE, U.K.
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Khiari O, Bouzemi N, Sánchez-Montero JM, Alcántara AR. Easy and Versatile Technique for the Preparation of Stable and Active Lipase-Based CLEA-like Copolymers by Using Two Homofunctional Cross-Linking Agents: Application to the Preparation of Enantiopure Ibuprofen. Int J Mol Sci 2023; 24:13664. [PMID: 37686470 PMCID: PMC10487927 DOI: 10.3390/ijms241713664] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2023] [Revised: 08/26/2023] [Accepted: 08/30/2023] [Indexed: 09/10/2023] Open
Abstract
An easy and versatile method was designed and applied successfully to obtain access to lipase-based cross-linked-enzyme aggregate-like copolymers (CLEA-LCs) using one-pot, consecutive cross-linking steps using two types of homobifunctional cross-linkers (glutaraldehyde and putrescine), mediated with amine activation through pH alteration (pH jump) as a key step in the process. Six lipases were utilised in order to assess the effectiveness of the technique, in terms of immobilization yields, hydrolytic activities, thermal stability and application in kinetic resolution. A good retention of catalytic properties was found for all cases, together with an important thermal and storage stability improvement. Particularly, the CLEA-LCs derived from Candida rugosa lipase showed an outstanding behaviour in terms of thermostability and capability for catalysing the enantioselective hydrolysis of racemic ibuprofen ethyl ester, furnishing the eutomer (S)-ibuprofen with very high conversion and enantioselectivity.
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Affiliation(s)
- Oussama Khiari
- Eco Compatible Asymmetric Catalysis Laboratory (LCAE), Department of Chemistry, Badji Mokhtar University, Annaba 23000, Algeria; (O.K.); (N.B.)
- Department of Chemistry in Pharmaceutical Sciences, Pharmacy Faculty, Complutense University of Madrid (UCM), Ciudad Universitaria, Plaza de Ramon y Cajal, s/n., 28040 Madrid, Spain
| | - Nassima Bouzemi
- Eco Compatible Asymmetric Catalysis Laboratory (LCAE), Department of Chemistry, Badji Mokhtar University, Annaba 23000, Algeria; (O.K.); (N.B.)
| | - José María Sánchez-Montero
- Department of Chemistry in Pharmaceutical Sciences, Pharmacy Faculty, Complutense University of Madrid (UCM), Ciudad Universitaria, Plaza de Ramon y Cajal, s/n., 28040 Madrid, Spain
| | - Andrés R. Alcántara
- Department of Chemistry in Pharmaceutical Sciences, Pharmacy Faculty, Complutense University of Madrid (UCM), Ciudad Universitaria, Plaza de Ramon y Cajal, s/n., 28040 Madrid, Spain
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Riaz R, Ashraf M, Hussain N, Baqar Z, Bilal M, Iqbal HMN. Redesigning Robust Biocatalysts by Engineering Enzyme Microenvironment and Enzyme Immobilization. Catal Letters 2023; 153:1587-1601. [DOI: 10.1007/s10562-022-04137-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/22/2022] [Accepted: 07/31/2022] [Indexed: 11/02/2022]
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Bilal M, Rashid EU, Munawar J, Iqbal HMN, Cui J, Zdarta J, Ashraf SS, Jesionowski T. Magnetic metal-organic frameworks immobilized enzyme-based nano-biocatalytic systems for sustainable biotechnology. Int J Biol Macromol 2023; 237:123968. [PMID: 36906204 DOI: 10.1016/j.ijbiomac.2023.123968] [Citation(s) in RCA: 18] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2022] [Revised: 02/21/2023] [Accepted: 03/04/2023] [Indexed: 03/11/2023]
Abstract
Nanobiocatalysts, in which enzyme molecules are integrated into/onto multifunctional materials, such as metal-organic frameworks (MOFs), have been fascinating and appeared as a new interface of nanobiocatalysis with multi-oriented applications. Among various nano-support matrices, functionalized MOFs with magnetic attributes have gained supreme interest as versatile nano-biocatalytic systems for organic bio-transformations. From the design (fabrication) to deployment (application), magnetic MOFs have manifested notable efficacy in manipulating the enzyme microenvironment for robust biocatalysis and thus assure requisite applications in several areas of enzyme engineering at large and nano-biocatalytic transformations, in particular. Magnetic MOFs-linked enzyme-based nano-biocatalytic systems offer chemo-regio- and stereo-selectivities, specificities, and resistivities under fine-tuned enzyme microenvironments. Considering the current sustainable bioprocesses demands and green chemistry needs, we reviewed synthesis chemistry and application prospects of magnetic MOFs-immobilized enzyme-based nano-biocatalytic systems for exploitability in different industrial and biotechnological sectors. More specifically, following a thorough introductory background, the first half of the review discusses various approaches to effectively developed magnetic MOFs. The second half mainly focuses on MOFs-assisted biocatalytic transformation applications, including biodegradation of phenolic compounds, removal of endocrine disrupting compounds, dye decolorization, green biosynthesis of sweeteners, biodiesel production, detection of herbicides and screening of ligands and inhibitors.
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Affiliation(s)
- Muhammad Bilal
- Institute of Chemical Technology and Engineering, Faculty of Chemical Technology, Poznan University of Technology, Berdychowo 4, PL-60965 Poznan, Poland.
| | - Ehsan Ullah Rashid
- Department of Chemistry, University of Agriculture Faisalabad, 38040 Faisalabad, Pakistan
| | - Junaid Munawar
- College of Chemistry, State Key Laboratory of Chemical Resource Engineering, Beijing University of Chemical Technology, 100029, PR China
| | - Hafiz M N Iqbal
- Tecnologico de Monterrey, School of Engineering and Sciences, Monterrey 64849, Mexico
| | - Jiandong Cui
- State Key Laboratory of Food Nutrition and Safety, Laboratory of Industrial Fermentation Microbiology, Ministry of Education, Tianjin University of Science and Technology, No 29, 13th, Avenue, Tianjin Economic and Technological Development Area (TEDA), Tianjin 300457, China
| | - Jakub Zdarta
- Institute of Chemical Technology and Engineering, Faculty of Chemical Technology, Poznan University of Technology, Berdychowo 4, PL-60965 Poznan, Poland
| | - Syed Salman Ashraf
- Department of Biology, College of Arts and Sciences, Khalifa University, Abu Dhabi, P.O. Box 127788, United Arab Emirates; Center for Biotechnology (BTC), Khalifa University, P.O. Box 127788, Abu Dhabi, United Arab Emirates; Center for Catalysis and Separation (CeCaS), Khalifa University, P.O. Box 127788, Abu Dhabi, United Arab Emirates; Advanced Materials Chemistry Center (AMCC), Khalifa University, P.O. Box 127788, Abu Dhabi, United Arab Emirates
| | - Teofil Jesionowski
- Institute of Chemical Technology and Engineering, Faculty of Chemical Technology, Poznan University of Technology, Berdychowo 4, PL-60965 Poznan, Poland.
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Liu S, Liu J, Wang Z, Wu Z, Wei Y, Liu P, Lan X, Liao Y, Lan P. In situ embedding of glucose oxidase in amorphous ZIF-7 with high catalytic activity and stability and mechanism investigation. Int J Biol Macromol 2023; 242:124806. [PMID: 37178879 DOI: 10.1016/j.ijbiomac.2023.124806] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/28/2023] [Revised: 04/26/2023] [Accepted: 05/06/2023] [Indexed: 05/15/2023]
Abstract
Glucose oxidase (GOx) has a great application potential in the determination of glucose concentration. However, its sensitivity to the environment and poor recyclability limited its broader application. Herein, with the assistance of DA-PEG-DA, a novel immobilized GOx based on amorphous Zn-MOFs (DA-PEG-DA/GOx@aZIF-7/PDA) was developed to impart excellent properties to the enzyme. SEM, TEM, XRD, and BET analyses confirmed that GOx was embedded in amorphous ZIF-7 with ~5 wt% loading. Compared with free GOx, DA-PEG-DA/GOx@aZIF-7/PDA exhibited enhanced stability, excellent reusability, and promising potential for glucose detection. After 10 repetitions, the catalytic activity of DA-PEG-DA/GOx@aZIF-7/PDA can maintain 95.53 % ± 3.16 %. In understanding the in situ embedding of GOx in ZIF-7, the interaction of zinc ion and benzimidazole with GOx was studied by using molecular docking and multi-spectral methods. Results showed that zinc ions and benzimidazole had multiple binding sites on the enzyme, which induced the accelerated synthesis of ZIF-7 around the enzyme. During binding, the structure of the enzyme changes, but such changes hardly affect the activity of the enzyme. This study provides not only a preparation strategy of immobilized enzyme with high activity, high stability, and low enzyme leakage rate for glucose detection, but also a more comprehensive understanding of the formation of immobilized enzymes using the in situ embedding strategy.
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Affiliation(s)
- Siyuan Liu
- Guangxi Key Laboratory for Polysaccharide Materials and Modifications, Key Laboratory of New Technology for Chemical and Biological Transformation Process of Guangxi Higher Education Institutes, Guangxi Minzu University, Nanning, Guangxi 530006, PR China
| | - Jingxing Liu
- Guangxi Key Laboratory for Polysaccharide Materials and Modifications, Key Laboratory of New Technology for Chemical and Biological Transformation Process of Guangxi Higher Education Institutes, Guangxi Minzu University, Nanning, Guangxi 530006, PR China
| | - Zefen Wang
- School of Chemistry and Chemical Engineering, Guangxi University, Nanning, Guangxi 530004, PR China; Institute of Biological Manufacturing Technology Co. Ltd, Guangxi Institute of Industrial Technology, Nanning, Guangxi 530002, PR China
| | - Zhiqi Wu
- Guangxi Key Laboratory for Polysaccharide Materials and Modifications, Key Laboratory of New Technology for Chemical and Biological Transformation Process of Guangxi Higher Education Institutes, Guangxi Minzu University, Nanning, Guangxi 530006, PR China
| | - Yiliang Wei
- Guangxi Key Laboratory for Polysaccharide Materials and Modifications, Key Laboratory of New Technology for Chemical and Biological Transformation Process of Guangxi Higher Education Institutes, Guangxi Minzu University, Nanning, Guangxi 530006, PR China
| | - Pengru Liu
- Guangxi Key Laboratory for Polysaccharide Materials and Modifications, Key Laboratory of New Technology for Chemical and Biological Transformation Process of Guangxi Higher Education Institutes, Guangxi Minzu University, Nanning, Guangxi 530006, PR China
| | - Xiongdiao Lan
- Guangxi Key Laboratory for Polysaccharide Materials and Modifications, Key Laboratory of New Technology for Chemical and Biological Transformation Process of Guangxi Higher Education Institutes, Guangxi Minzu University, Nanning, Guangxi 530006, PR China.
| | - Yexin Liao
- Guangxi Key Laboratory for Polysaccharide Materials and Modifications, Key Laboratory of New Technology for Chemical and Biological Transformation Process of Guangxi Higher Education Institutes, Guangxi Minzu University, Nanning, Guangxi 530006, PR China
| | - Ping Lan
- Guangxi Key Laboratory for Polysaccharide Materials and Modifications, Key Laboratory of New Technology for Chemical and Biological Transformation Process of Guangxi Higher Education Institutes, Guangxi Minzu University, Nanning, Guangxi 530006, PR China.
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Ghasemi S, Yousefi M, Nikseresht A. Comparison of covalent and in situ immobilization of Candida antarctica lipase A on a flexible nanoporous material. 3 Biotech 2023; 13:99. [PMID: 36866325 PMCID: PMC9971526 DOI: 10.1007/s13205-023-03522-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/17/2022] [Accepted: 02/13/2023] [Indexed: 03/02/2023] Open
Abstract
In this study, Candida antarctica lipase A, which has a unique applicability for the conversion of highly branched and bulky substrates, was subjected to immobilization on the flexible nanoporous MIL-53(Fe) by two approaches: covalent coupling and in situ immobilization method. The pre-synthesized support under ultrasound irradiation was incubated with N,N-dicyclohexylcarbodiimide to mediate the covalent attachment between the carboxylic groups on the support surface and amino groups of enzyme molecules. The in situ immobilization in which the enzyme molecules directly were embedded into the metal-organic framework was performed under mild operating conditions in a facile one-step manner. Both immobilized derivatives of the enzyme were characterized by scanning electron microscopy, X-ray diffraction, thermogravimetric analysis, FT-IR spectra, and energy-dispersive X-ray spectroscopy. In the in situ immobilization method, the enzyme molecules were efficiently encapsulated within the support with a high loading capacity (220 ± 5 mg/g support). On the other hand, the covalent attachment resulted in immobilizing much lower concentrations of the enzyme (20 ± 2.2 mg/g support). Although both immobilized derivatives of lipase showed broader pH and temperature tolerance relative to the soluble enzyme, the biocatalyst, which was prepared through in situ method, was more stable at elevated temperatures than the covalently immobilized lipase. Furthermore, in situ immobilized derivatives of Candida antarctica lipase A could be efficiently reused for at least eight cycles (> 70% of retained activity). In contrast, its covalently immobilized counterpart showed a drastic decrease in activity after five cycles (less than 10% of retained activity at the end of 6 rounds).
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Affiliation(s)
- Saba Ghasemi
- Department of Chemistry, Ilam Branch, Islamic Azad University, Ilam, Iran
| | - Maryam Yousefi
- Nanobiotechnology Research Center, Avicenna Research Institute, ACECR, Tehran, Iran
| | - Ahmad Nikseresht
- Department of Chemistry, Payame Noor University (PNU), PO Box 19395-4697, Tehran, Iran
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41
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Kanprakobkit W, Kielarova SW, Wichai U, Bunyapraphatsara N, Kielar F. Incrementing MCT Character of Coconut Oil Using Enzyme Catalyzed Interesterification. J Oleo Sci 2023; 72:87-97. [PMID: 36504191 DOI: 10.5650/jos.ess22269] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022] Open
Abstract
The fatty acid composition of coconut oil was modified using enzyme catalyzed interesterification with the aim of obtaining a product more alike to commercial MCT oils. This modification was carried out with the aim to obtain a product with some of the health benefits shown by MCT oils. Initially, lipase B from Candida antarctica immobilized on acrylic resin and lipozyme TL IM were tested as enzyme catalysts for the reaction. The enzyme catalysts have shown similar performance and lipozyme TL IM has been chosen as the catalyst based on its lower cost. The effects of reaction time, oil to methyl octanoate ratio, and enzyme loading on the reaction performance have been investigated with response surface methodology (RSM) utilizing the Box-Behnken approach. The optimized reaction was scaled up to 20 g. The possibility to source the medium chain fatty acid esters from coconut oil fatty acid distillate using a simple procedure was demonstrated and the possibility to use these esters for the interesterification of coconut oil has been demonstrated as well.
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Affiliation(s)
- Winranath Kanprakobkit
- Department of Chemistry and Center of Excellence in Biomaterials, Faculty of Science, Naresuan University
| | | | - Uthai Wichai
- Department of Chemistry and Center of Excellence in Biomaterials, Faculty of Science, Naresuan University
| | | | - Filip Kielar
- Department of Chemistry and Center of Excellence in Biomaterials, Faculty of Science, Naresuan University
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Tu H, Niu F, Li X, Gao K, Chen Z, Wang P, Li Z. Nanoarchitectonics of penicillin G acylase with Mn2+ doped β-cyclodextrin/Fe3O4 for enhanced catalytic activity and reusability. MOLECULAR CATALYSIS 2023. [DOI: 10.1016/j.mcat.2022.112838] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/02/2022]
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43
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Cytochromes P450 in biosensing and biosynthesis applications: Recent progress and future perspectives. Trends Analyt Chem 2023. [DOI: 10.1016/j.trac.2022.116791] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
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Shin JS, Li S. DNA-Immobilized Fluorescent Polystyrene Nanoparticles as Probes with Tunable Detection Limits. ACS OMEGA 2022; 7:48310-48319. [PMID: 36591202 PMCID: PMC9798753 DOI: 10.1021/acsomega.2c06498] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/09/2022] [Accepted: 11/30/2022] [Indexed: 06/17/2023]
Abstract
DNA-immobilized nanoparticle probes show high target specificity; thus, they are employed in various bioengineering and biomedicine applications. When the nanoparticles employed are dye-loaded polymer particles, the resulting probes have the additional benefit of biocompatibility and versatile surface properties. In this study, we construct DNA-immobilized fluorescent polystyrene (PS) nanoparticles through controlled surface reactions. PS nanoparticles with surface carboxyl groups are utilized, and amine-functionalized dye molecules and capture DNAs are covalently immobilized via a one-pot reaction. We show that the surface chemistry employed allows for quantitative control over the number of fluorescent dyes and DNA strands immobilized on the PS nanoparticle surfaces. The nanoparticles thus prepared are then used for DNA detection. The off state of the nanoprobe is achieved by hybridizing quencher-functionalized DNAs (Q-DNAs) to the capture DNAs immobilized on nanoparticle surfaces. Target-DNAs (T-DNAs) are detected by the displacement of the prehybridized Q-DNAs. The nanoprobes show successful detection of T-DNAs with high sequence specificity and long-term stability. They also show excellent detection sensitivity, and the detection limit can be tuned by adjusting the capture DNA-to-dye ratio.
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Gong YZ, Niu QY, Liu YG, Dong J, Xia MM. Development of multifarious carrier materials and impact conditions of immobilised microbial technology for environmental remediation: A review. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2022; 314:120232. [PMID: 36155222 DOI: 10.1016/j.envpol.2022.120232] [Citation(s) in RCA: 20] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/20/2022] [Revised: 09/13/2022] [Accepted: 09/17/2022] [Indexed: 06/16/2023]
Abstract
Microbial technology is the most sustainable and eco-friendly method of environmental remediation. Immobilised microorganisms were introduced to further advance microbial technology. In immobilisation technology, carrier materials distribute a large number of microorganisms evenly on their surface or inside and protect them from external interference to better treat the targets, thus effectively improving their bioavailability. Although many carrier materials have been developed, there have been relatively few comprehensive reviews. Therefore, this paper summarises the types of carrier materials explored in the last ten years from the perspective of structure, microbial activity, and cost. Among these, carbon materials and biofilms, as environmentally friendly functional materials, have been widely applied for immobilisation because of their abundant sources and favorable growth conditions for microorganisms. The novel covalent organic framework (COF) could also be a new immobilisation material, due to its easy preparation and high performance. Different immobilisation methods were used to determine the relationship between carriers and microorganisms. Co-immobilisation is particularly important because it can compensate for the deficiencies of a single immobilisation method. This paper emphasises that impact conditions also affect the immobilisation effect and function. In addition to temperature and pH, the media conditions during the preparation and reaction of materials also play a role. Additionally, this study mainly reviews the applications and mechanisms of immobilised microorganisms in environmental remediation. Future development of immobilisation technology should focus on the discovery of novel and environmentally friendly carrier materials, as well as the establishment of optimal immobilisation conditions for microorganisms. This review intends to provide references for the development of immobilisation technology in environmental applications and to further the improve understanding of immobilisation technology.
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Affiliation(s)
- You-Zi Gong
- College of Environmental Science and Engineering, Hunan University, Changsha, Hunan, 410082, PR China; Key Laboratory of Environmental Biology and Pollution Control, Ministry of Education, Hunan University, Changsha, 410082, PR China
| | - Qiu-Ya Niu
- College of Environmental Science and Engineering, Hunan University, Changsha, Hunan, 410082, PR China; Key Laboratory of Environmental Biology and Pollution Control, Ministry of Education, Hunan University, Changsha, 410082, PR China.
| | - Yun-Guo Liu
- College of Environmental Science and Engineering, Hunan University, Changsha, Hunan, 410082, PR China; Key Laboratory of Environmental Biology and Pollution Control, Ministry of Education, Hunan University, Changsha, 410082, PR China
| | - Jie Dong
- College of Environmental Science and Engineering, Hunan University, Changsha, Hunan, 410082, PR China; Key Laboratory of Environmental Biology and Pollution Control, Ministry of Education, Hunan University, Changsha, 410082, PR China
| | - Meng-Meng Xia
- College of Environmental Science and Engineering, Hunan University, Changsha, Hunan, 410082, PR China; Key Laboratory of Environmental Biology and Pollution Control, Ministry of Education, Hunan University, Changsha, 410082, PR China
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Vasicek TW, Guillermo S, Swofford DR, Durchman J, Jenkins SV. β-Glucosidase Immobilized on Magnetic Nanoparticles: Controlling Biomolecule Footprint and Particle Functional Group Density to Navigate the Activity-Stability Tradeoff. ACS APPLIED BIO MATERIALS 2022; 5:5347-5355. [PMID: 36331934 DOI: 10.1021/acsabm.2c00735] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
In the present work, the immobilized footprint of β-glucosidase (BGL) on silica-coated iron oxide was explored to produce reusable catalysts with flexible active sites for high activity and heightened storage stability. Synthesized iron oxide particles were coated with silica and functionalized with various densities of (3-aminopropyl)triethoxysilane (APTES) to obtain particles with amine densities ranging from 0 to 3 × 10-5 mol/g particle. The amine-modified particles were activated with glutaraldehyde, and subsequently, BGL was immobilized using either a 0.1 or 1 mg/mL enzyme solution to produce biomolecules with a large or small footprint on the particle surface. The initial activity, activity for subsequent hydrolysis cycles, activity after extended storage, and biomolecule footprint were studied as a function of APTES density and concentration of enzyme used for immobilization. At high immobilization amounts, the specific activity and footprint were reduced, but the immobilized biomolecules were stable during storage. However, at low enzyme immobilizations, the activity of the enzymes was retained, the immobilized enzymes adopted large footprints, and the storage stability increased with APTES density relative to the free enzyme. These results highlight how controlling both the protein load and functional group density can yield immobilized enzymes possessing high activity, which are stable during storage.
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Affiliation(s)
- Thaddeus W Vasicek
- Department of Chemistry, The Citadel, Charleston, South Carolina29409, United States
| | - Sylvester Guillermo
- Department of Chemistry, The Citadel, Charleston, South Carolina29409, United States
| | - Danny R Swofford
- Department of Chemistry, The Citadel, Charleston, South Carolina29409, United States
| | - Jeremy Durchman
- Department of Physical Science, University of Arkansas Fort Smith, Fort Smith, Arkansas72913, United States
| | - Samir V Jenkins
- Department of Radiation Oncology, University of Arkansas for Medical Sciences, Little Rock, Arkansas72205, United States
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da Rocha TN, Morellon-Sterlling R, Rocha-Martin J, Bolivar JM, Gonçalves LRB, Fernandez-Lafuente R. Immobilization of Penicillin G Acylase on Vinyl Sulfone-Agarose: An Unexpected Effect of the Ionic Strength on the Performance of the Immobilization Process. MOLECULES (BASEL, SWITZERLAND) 2022; 27:molecules27217587. [PMID: 36364414 PMCID: PMC9654356 DOI: 10.3390/molecules27217587] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/14/2022] [Revised: 11/02/2022] [Accepted: 11/03/2022] [Indexed: 11/09/2022]
Abstract
Penicillin G acylase (PGA) from Escherichia coli was immobilized on vinyl sulfone (VS) agarose. The immobilization of the enzyme failed at all pH values using 50 mM of buffer, while the progressive increase of ionic strength permitted its rapid immobilization under all studied pH values. This suggests that the moderate hydrophobicity of VS groups is enough to transform the VS-agarose in a heterofunctional support, that is, a support bearing hydrophobic features (able to adsorb the proteins) and chemical reactivity (able to give covalent bonds). Once PGA was immobilized on this support, the PGA immobilization on VS-agarose was optimized with the purpose of obtaining a stable and active biocatalyst, optimizing the immobilization, incubation and blocking steps characteristics of this immobilization protocol. Optimal conditions were immobilization in 1 M of sodium sulfate at pH 7.0, incubation at pH 10.0 for 3 h in the presence of glycerol and phenyl acetic acid, and final blocking with glycine or ethanolamine. This produced biocatalysts with stabilities similar to that of the glyoxyl-PGA (the most stable biocatalyst of this enzyme described in literature), although presenting just over 55% of the initially offered enzyme activity versus the 80% that is recovered using the glyoxyl-PGA. This heterofuncionality of agarose VS beads opens new possibilities for enzyme immobilization on this support.
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Affiliation(s)
- Thays N. da Rocha
- Departamento de Biocatálisis, ICP-CSIC, Campus UAM-CSIC, 28049 Madrid, Spain
- Chemical Engineering Department, Campus do Pici, Federal University of Ceará, Bloco 709, Fortaleza CEP 60440-900, CE, Brazil
| | - Roberto Morellon-Sterlling
- Departamento de Biocatálisis, ICP-CSIC, Campus UAM-CSIC, 28049 Madrid, Spain
- Departamento de Biología Molecular, Campus UAM-CSIC, Universidad Autónoma de Madrid, Darwin 2, Cantoblanco, 28049 Madrid, Spain
| | - Javier Rocha-Martin
- Department of Biochemistry and Molecular Biology, Faculty of Biology, Complutense University of Madrid, José Antonio Novais 12, 28040 Madrid, Spain
| | - Juan M. Bolivar
- FQPIMA Group, Chemical and Materials Engineering Department, Faculty of Chemical Sciences, Complutense University of Madrid, Complutense Ave., 28040 Madrid, Spain
| | - Luciana R. B. Gonçalves
- Chemical Engineering Department, Campus do Pici, Federal University of Ceará, Bloco 709, Fortaleza CEP 60440-900, CE, Brazil
| | - Roberto Fernandez-Lafuente
- Departamento de Biocatálisis, ICP-CSIC, Campus UAM-CSIC, 28049 Madrid, Spain
- Center of Excellence in Bionanoscience Research, Member of the External Scientific Advisory Board, King Abdulaziz University, Jeddah 21589, Saudi Arabia
- Correspondence: ; Tel.: +34-91594804
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Liu J, Li T, Wang G, Chen J, Yao Q, Li Q, Zhao X. Aptamer-assisted two-point immobilized agonist-bound angiotensin II type 1 receptor for a second-site modulator discovery. iScience 2022; 25:105361. [DOI: 10.1016/j.isci.2022.105361] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/26/2022] [Revised: 09/26/2022] [Accepted: 10/12/2022] [Indexed: 12/01/2022] Open
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Abdelhamid MAA, Son RG, Park KS, Pack SP. Oriented multivalent silaffin-affinity immobilization of recombinant lipase on diatom surface: Reliable loading and high performance of biocatalyst. Colloids Surf B Biointerfaces 2022; 219:112830. [PMID: 36162181 DOI: 10.1016/j.colsurfb.2022.112830] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/16/2022] [Revised: 08/31/2022] [Accepted: 09/03/2022] [Indexed: 10/31/2022]
Abstract
Microbial lipases are widely used biocatalysts; however, their functional surface immobilization should be designed for successful industrial applications. One of the unmet challenges is to develop a practical surface immobilization to achieve both high stability and activity of lipases upon the large loading. Herein, we present a silaffin-based multivalent design as a simple and oriented approach for Bacillus subtilis lipase A (LipA) immobilization on economic diatom biosilica matrix to yield highly-stable activity with reliable loading. Specifically, silaffin peptides Sil3H, Sil3K, and Sil3R, as monovalent or divalent genetic fusion tags, selectively immobilized LipA on biosilica surfaces. Sil3K peptide fusion to LipA termini most efficiently produced high catalytic activity upon immobilization. The activity was 70-fold greater than that of immobilized wild-type LipA. Compared to single fusion, the double Sil3K fusion displayed 1.7 higher enzymatic loading combined with high catalytic performances of LipA on biosilica surfaces. The multivalent immobilized LipA was distributed uniformly on biosilica surfaces. The biocatalyst was stable over a wide pH range with 98% retention activity after 10 reuses. The stabilized lipase fusion was compatible with laundry detergents, making it an attractive biocatalyst for detergent formulations. These findings demonstrate that multivalent surface immobilization is a plausible method for developing high-performance biocatalysts suitable for industrial biotechnological applications.
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Affiliation(s)
- Mohamed A A Abdelhamid
- Department of Biotechnology and Bioinformatics, Korea University, Sejong-Ro 2511, Sejong 30019, Republic of Korea; Department of Botany and Microbiology, Faculty of Science, Minia University, Minia 61519, Egypt
| | - Ryeo Gang Son
- Department of Biotechnology and Bioinformatics, Korea University, Sejong-Ro 2511, Sejong 30019, Republic of Korea
| | - Ki Sung Park
- Department of Biotechnology and Bioinformatics, Korea University, Sejong-Ro 2511, Sejong 30019, Republic of Korea
| | - Seung Pil Pack
- Department of Biotechnology and Bioinformatics, Korea University, Sejong-Ro 2511, Sejong 30019, Republic of Korea.
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Rossino G, Robescu MS, Licastro E, Tedesco C, Martello I, Maffei L, Vincenti G, Bavaro T, Collina S. Biocatalysis: A smart and green tool for the preparation of chiral drugs. Chirality 2022; 34:1403-1418. [PMID: 35929567 DOI: 10.1002/chir.23498] [Citation(s) in RCA: 17] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2022] [Revised: 07/12/2022] [Accepted: 07/18/2022] [Indexed: 01/07/2023]
Abstract
Over the last decades, biocatalysis has achieved growing interest thanks to its potential to enable high efficiency, high yield, and eco-friendly processes aimed at the production of pharmacologically relevant compounds. Particularly, biocatalysis proved an effective and potent tool in the preparation of chiral molecules, and the recent innovations of biotechnologies and nanotechnologies open up a new era of further developments in this field. Different strategies are now available for the synthesis of chiral drugs and their intermediates. Enzymes are green tools that offer several advantages, associated both to catalysis and environmentally friendly reactants. Specifically, the use of enzymes isolated from biological sources or of whole-cell represents a valuable approach to obtain pharmaceutical products. The sustainability, the higher efficiency, and cost-effectiveness of biocatalytic reactions result in improved performance and properties that can be translated from academia to industry. In this review, we focus on biocatalytic approaches for synthesizing chiral drugs or their intermediates. Aiming to unveil the potentialities of biocatalysis systems, we discuss different examples of innovative biocatalytic approaches and their applications in the pharmaceutical industry.
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Affiliation(s)
- Giacomo Rossino
- Department of Drug Sciences, University of Pavia, Viale Taramelli, Pavia, Lombardia, Italy
| | - Marina Simona Robescu
- Department of Drug Sciences, University of Pavia, Viale Taramelli, Pavia, Lombardia, Italy
| | - Ester Licastro
- Department of Drug Sciences, University of Pavia, Viale Taramelli, Pavia, Lombardia, Italy
| | - Claudia Tedesco
- Department of Drug Sciences, University of Pavia, Viale Taramelli, Pavia, Lombardia, Italy
| | - Ilaria Martello
- Department of Drug Sciences, University of Pavia, Viale Taramelli, Pavia, Lombardia, Italy
| | - Luciana Maffei
- Department of Drug Sciences, University of Pavia, Viale Taramelli, Pavia, Lombardia, Italy
| | - Gregory Vincenti
- Department of Drug Sciences, University of Pavia, Viale Taramelli, Pavia, Lombardia, Italy
| | - Teodora Bavaro
- Department of Drug Sciences, University of Pavia, Viale Taramelli, Pavia, Lombardia, Italy
| | - Simona Collina
- Department of Drug Sciences, University of Pavia, Viale Taramelli, Pavia, Lombardia, Italy
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