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Yue H, Chen G, Zhang Z, Guo Z, Zhang Z, Zhang S, Turlings TCJ, Zhou X, Peng J, Gao Y, Zhang D, Shi X, Liu Y. Single-cell transcriptome landscape elucidates the cellular and developmental responses to tomato chlorosis virus infection in tomato leaf. PLANT, CELL & ENVIRONMENT 2024; 47:2660-2674. [PMID: 38619176 DOI: 10.1111/pce.14906] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/16/2024] [Revised: 03/14/2024] [Accepted: 03/23/2024] [Indexed: 04/16/2024]
Abstract
Plant viral diseases compromise the growth and yield of the crop globally, and they tend to be more serious under extreme temperatures and drought climate changes. Currently, regulatory dynamics during plant development and in response to virus infection at the plant cell level remain largely unknown. In this study, single-cell RNA sequencing on 23 226 individual cells from healthy and tomato chlorosis virus-infected leaves was established. The specific expression and epigenetic landscape of each cell type during the viral infection stage were depicted. Notably, the mesophyll cells showed a rapid function transition in virus-infected leaves, which is consistent with the pathological changes such as thinner leaves and decreased chloroplast lamella in virus-infected samples. Interestingly, the F-box protein SKIP2 was identified to play a pivotal role in chlorophyll maintenance during virus infection in tomato plants. Knockout of the SlSKIP2 showed a greener leaf state before and after virus infection. Moreover, we further demonstrated that SlSKIP2 was located in the cytomembrane and nucleus and directly regulated by ERF4. In conclusion, with detailed insights into the plant responses to viral infections at the cellular level, our study provides a genetic framework and gene reference in plant-virus interaction and breeding in the future research.
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Affiliation(s)
- Hao Yue
- Institute of Plant Protection, Hunan Academy of Agricultural Sciences, Changsha, China
- Longping Branch, College of Biology, Hunan University, Changsha, China
| | - Gong Chen
- College of Plant Protection, Hunan Agricultural University, Changsha, China
| | - Zhuo Zhang
- Institute of Plant Protection, Hunan Academy of Agricultural Sciences, Changsha, China
| | - Zhaojiang Guo
- Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Zhanhong Zhang
- Institute of Vegetable, Hunan Academy of Agricultural Sciences, Changsha, China
| | - Songbai Zhang
- Institute of Plant Protection, Hunan Academy of Agricultural Sciences, Changsha, China
| | - Ted C J Turlings
- Laboratory of Fundamental and Applied Research in Chemical Ecology, Institute of Biology, University of Neuchâtel, Neuchâtel, Switzerland
| | - Xuguo Zhou
- Department of Entomology, University of Kentucky, Lexington, Kentucky, USA
| | - Jing Peng
- Institute of Plant Protection, Hunan Academy of Agricultural Sciences, Changsha, China
| | - Yang Gao
- Institute of Plant Protection, Hunan Academy of Agricultural Sciences, Changsha, China
| | - Deyong Zhang
- Institute of Plant Protection, Hunan Academy of Agricultural Sciences, Changsha, China
- Longping Branch, College of Biology, Hunan University, Changsha, China
| | - Xiaobin Shi
- Institute of Plant Protection, Hunan Academy of Agricultural Sciences, Changsha, China
- Longping Branch, College of Biology, Hunan University, Changsha, China
| | - Yong Liu
- Institute of Plant Protection, Hunan Academy of Agricultural Sciences, Changsha, China
- Longping Branch, College of Biology, Hunan University, Changsha, China
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Saito C, Makita E, Yamane S, Urairi C, Hoshi T, Doi M, Yoshizaki S, Hinomoto N. A new pest suction machine to control Bemisia tabaci (Hemiptera: Aleyrodidae) in tomato greenhouses. JOURNAL OF ECONOMIC ENTOMOLOGY 2024:toae097. [PMID: 38757660 DOI: 10.1093/jee/toae097] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/25/2023] [Revised: 04/17/2024] [Accepted: 05/03/2024] [Indexed: 05/18/2024]
Abstract
The sweetpotato whitefly Bemisia tabaci (Gennadius) (Hemiptera: Aleyrodidae) is challenging to control using chemical pesticides owing to its resistance to many insecticides. Thus, there has been an increasing demand for alternative control measures. Thus, this study evaluated the efficacy of a newly designed pest suction machine to manage whiteflies on tomato plants (Solanum lycopersicum L.) (Solanales: Solanaceae) in greenhouses over 2 seasons. The suction machine comprised a battery-powered cart with a mounted suction unit, an ultrasonic device, and green lights. Ultrasonic irradiation provided non-contact vibration, facilitating the movement of adult whiteflies away from the plants, and green lights attracted them to the suction device. This combination effectively captured whitefly adults, even with a weak suction force, saving electricity consumption. The efficacy of suction machine was further evaluated by measuring the number of whitefly adults caught by the machine and the number of adults and nymphs remaining on the tomato leaves. The whitefly population was considerably lower in the treated blocks than in the non-treated blocks in the autumn trial. The machine reduced the density of whitefly adults without using chemical pesticides. Although a lot of optimizations would be required, suction control is an additional and alternative strategy that may be incorporated in the integrated pest management of whiteflies on greenhouse tomato plants.
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Affiliation(s)
- Chiharu Saito
- Shizuoka Prefectural Research Institute of Agriculture and Forestry, 678-1 Tomigaoka, Iwata, Shizuoka 438-0803, Japan
- Laboratory of Ecological Information, Division of Environmental Science and Technology, Graduate School of Agriculture, Kyoto University, Kitashirakawa-Oiwakecho, Sakyou-ku, Kyoto 606-8502, Japan
- Shizuoka Prefectural Western Agriculture and Forestry Office, 1-12-1, Chuo, Chuo-ku, Hamamatsu, Shizuoka 430-0929, Japan
| | - Eiichi Makita
- Shizuoka Prefectural Research Institute of Agriculture and Forestry, 678-1 Tomigaoka, Iwata, Shizuoka 438-0803, Japan
| | - Suguru Yamane
- Shizuoka Prefectural Research Institute of Agriculture and Forestry, 678-1 Tomigaoka, Iwata, Shizuoka 438-0803, Japan
- Shizuoka Prefectural Office, 9-6 Outemachi, Aoi-ku, Shizuoka, Shizuoka 420-8601, Japan
| | - Chihiro Urairi
- Institute of Vegetable and Floriculture Science, NARO, 360 Kusawa, Anou, Tsu, Mie 514-2392, Japan
| | - Takayuki Hoshi
- Pixie Dust Technologies, Inc, 4F, 2-20-5, Kandamisaki, Chiyoda-ku, Tokyo 101-0061, Japan
| | - Makoto Doi
- Shizuoka Prefectural Research Institute of Agriculture and Forestry, 678-1 Tomigaoka, Iwata, Shizuoka 438-0803, Japan
| | - Suzuka Yoshizaki
- Shizuoka Prefectural Research Institute of Agriculture and Forestry, 678-1 Tomigaoka, Iwata, Shizuoka 438-0803, Japan
- Shizuoka Prefectural Kamo Agriculture and Forestry Office, 531-1, Naka, Shimoda, Shizuoka 415-0016, Japan
| | - Norihide Hinomoto
- Laboratory of Ecological Information, Division of Environmental Science and Technology, Graduate School of Agriculture, Kyoto University, Kitashirakawa-Oiwakecho, Sakyou-ku, Kyoto 606-8502, Japan
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Kwon SJ, Lee YJ, Cho YE, Byun HS, Seo JK. Engineering of stable infectious cDNA constructs of a fluorescently tagged tomato chlorosis virus. Virology 2024; 593:110010. [PMID: 38364352 DOI: 10.1016/j.virol.2024.110010] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2023] [Revised: 01/15/2024] [Accepted: 01/26/2024] [Indexed: 02/18/2024]
Abstract
Tomato chlorosis virus (ToCV) is an emerging pathogen that cause severe yellow leaf disorder syndrome in tomato plants. In this study, we aimed to generate a recombinant ToCV tagged with green fluorescent protein (GFP) to enable real-time monitoring of viral infection in living plants. Transformation of the full-length cDNA construct of ToCV RNA1 into Escherichia coli resulted in instability issues, which were successfully overcome by inserting a plant intron into RNA1. Subsequently, a GFP tag was engineered into a cDNA construct of ToCV RNA2. The resulting recombinant ToCV-GFP could systemically infect Nicotiana benthamiana plants, and GFP expression was observed along the major veins. Utilizing ToCV-GFP, we also showed that ToCV engages in antagonistic relationships with two different tomato-infecting viruses in mixed infections in N. benthamiana. This study demonstrates the potential of ToCV-GFP as a valuable tool for the visual tracking of infection and movement of criniviruses in living plants.
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Affiliation(s)
- Sun-Jung Kwon
- Institutes of Green Bio Science and Technology, Seoul National University, Pyeongchang 25354, Republic of Korea
| | - Ye-Ji Lee
- Crop Protection Division, National Institute of Agricultural Sciences, Rural Development Administration, Wanju 55365, Republic of Korea
| | - Young-Eun Cho
- Institutes of Green Bio Science and Technology, Seoul National University, Pyeongchang 25354, Republic of Korea
| | - Hee-Seong Byun
- Crop Protection Division, National Institute of Agricultural Sciences, Rural Development Administration, Wanju 55365, Republic of Korea
| | - Jang-Kyun Seo
- Institutes of Green Bio Science and Technology, Seoul National University, Pyeongchang 25354, Republic of Korea; Department of International Agricultural Technology, Seoul National University, Pyeongchang 25354, Republic of Korea.
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Wen Z, Feng J, Zhu B, Xu W, Xu F, Tan H, Chu D, Guo L. Pyrifluquinazon baseline susceptibility and inhibition of Tomato chlorosis virus transmission by Bemisia tabaci. PEST MANAGEMENT SCIENCE 2023; 79:3520-3528. [PMID: 37144964 DOI: 10.1002/ps.7532] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/31/2023] [Revised: 04/12/2023] [Accepted: 05/03/2023] [Indexed: 05/06/2023]
Abstract
BACKGROUND Tomato chlorosis virus (ToCV) is associated with tomato yellow leaf disorder diseases in more than 20 countries. ToCV can be transmitted in a semipersistent manner by whitefly vectors such as Bemisia tabaci. Controlling the vector pests by using chemical insecticides is an efficient and effective approach to reduce and interrupt the virus transmission. Pyrifluquinazon is a new pyridine azomethine derivative, showing insecticidal toxicity to sucking pests by disturbing their feeding behavior. However, limited attention has been paid to the performance of pyrifluquinazon against B. tabaci and ToCV transmission. RESULT This study showed the lethal concentration of 50% (LC50 ) values of pyrifluquinazon to 22 B. tabaci field populations ranged from 0.54 to 2.44 mg L-1 , and the baseline susceptibility of B. tabaci to pyrifluquinazon was 1.24 mg L-1 with a 95% confidence limit of 0.35-1.85 mg L-1 . Pyrifluquinazon and afidopyropen did not show cross-resistance to dinotefuran and pymetrozine in B. tabaci, which both inhibited the feeding activities of B. tabaci. The antifeedant concentration of 50% (AFC50 ) values at 48 h were 0.70 mg L-1 for pyrifluquinazon and 2.13 mg L-1 for afidopyropen. Foliar application of pyrifluquinazon and afidopyropen reduced the ToCV transmission by 40.91% and 33.33%, respectively and significantly decreased the ToCV loads in tomato plants under laboratory conditions. CONCLUSION These results provided new information about the effects of modulators of the vanilloid-type transient receptor potential channel on the toxicity to B. tabaci and inhibition of ToCV transmission. © 2023 Society of Chemical Industry.
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Affiliation(s)
- Zanrong Wen
- Shandong Engineering Research Center for Environment-Friendly Agricultural Pest Management, College of Plant Health and Medicine, Qingdao Agricultural University, Qingdao, People's Republic of China
| | - Jinzheng Feng
- Shandong Engineering Research Center for Environment-Friendly Agricultural Pest Management, College of Plant Health and Medicine, Qingdao Agricultural University, Qingdao, People's Republic of China
| | - Bolin Zhu
- Shandong Engineering Research Center for Environment-Friendly Agricultural Pest Management, College of Plant Health and Medicine, Qingdao Agricultural University, Qingdao, People's Republic of China
| | - Wei Xu
- Food Futures Institute, Murdoch University, Murdoch, Western Australia, Australia
| | - Fa Xu
- Shandong Engineering Research Center for Environment-Friendly Agricultural Pest Management, College of Plant Health and Medicine, Qingdao Agricultural University, Qingdao, People's Republic of China
| | - Huiwen Tan
- Shandong Engineering Research Center for Environment-Friendly Agricultural Pest Management, College of Plant Health and Medicine, Qingdao Agricultural University, Qingdao, People's Republic of China
| | - Dong Chu
- Shandong Engineering Research Center for Environment-Friendly Agricultural Pest Management, College of Plant Health and Medicine, Qingdao Agricultural University, Qingdao, People's Republic of China
| | - Lei Guo
- Shandong Engineering Research Center for Environment-Friendly Agricultural Pest Management, College of Plant Health and Medicine, Qingdao Agricultural University, Qingdao, People's Republic of China
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Zhao J, Sun X, Dai H, Zhang X, Zhang D, Zhu X. Changes in Gene Expression of Whiteflies, Bemisia tabaci MED Feeding on Tomato Plants Infected by One of the Criniviruses, Tomato Chlorosis Virus through Transcriptome Analysis. Int J Genomics 2023; 2023:3807812. [PMID: 37261104 PMCID: PMC10228217 DOI: 10.1155/2023/3807812] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2022] [Revised: 08/12/2022] [Accepted: 05/01/2023] [Indexed: 06/02/2023] Open
Abstract
Tomato chlorosis virus (ToCV), transmitted by the whitefly, Bemisia tabaci (Gennadius; Hemiptera: Aleyrodidae) has been continuously emerging on tomato plants and causing a significant economic loss throughout China. In the current study, RNA-Seq analysis was used to explore the gene expression profiles of B. tabaci Mediterranean (MED) that fed on both ToCV-infected and -uninfected tomato plants for 6, 12, 24, and 48 hours, respectively. The results revealed that dynamic changes occurred in the gene expressions of whiteflies at different time intervals after they acquired the virus. A total of 1709, 461, 4548, and 1748 differentially expressed genes (DEGs) were identified after a 6, 12, 24, and 48 hours feeding interval for the viral acquisition, respectively. The least number of expressed genes appeared in whiteflies with the 12 hours feeding treatment, and the largest numbers of those found in those with 24 hours feeding treatment. Kyoto Encyclopedia of Genes and Genomes pathway analysis revealed that B. tabaci MED responded to ToCV acquisition through altering its nerve system development, fertility, detoxification, glucose metabolism, and immune function before it lost its ability to transmit the virus. The number of DEGs, degree of differential gene expressions, expression level of the same gene, involved biological processes, and metabolic functions in whiteflies post the 12 hours feeding, and viral acquisition were different from those from other three feeding treatments, which could be a significant finding suggesting an effective control of B. tabaci MED should be done less than 12 hours after whiteflies started feeding on ToCV-infected tomatoes. Our results further provided a clarified understanding in how B. tabaci was protected from viral acquisitions through comparison of the differential profile of gene expressions in whiteflies feeding on plants that were infected by semipersistent viruses.
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Affiliation(s)
- Jing Zhao
- Key Laboratory of Biology and Molecular Biology of University in Shandong, College of Seed and Facility Agricultural Engineering, Weifang University, Weifang 261061, China
| | - Xiaoan Sun
- Facility Horticulture of University in Shandong, College of Agriculture, Weifang University of Science & Technology, Shouguang 262700, China
| | - Huijie Dai
- Facility Horticulture of University in Shandong, College of Agriculture, Weifang University of Science & Technology, Shouguang 262700, China
| | - Xianping Zhang
- Shandong Provincial key Laboratory for Biology of Vegetable Diseases and Insect Pests, College of Plant Protection, Shandong Agricultural University, Taian 271018, China
| | - Dezhen Zhang
- Facility Horticulture of University in Shandong, College of Agriculture, Weifang University of Science & Technology, Shouguang 262700, China
| | - Xiaoping Zhu
- Shandong Provincial key Laboratory for Biology of Vegetable Diseases and Insect Pests, College of Plant Protection, Shandong Agricultural University, Taian 271018, China
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Shang K, Xiao L, Zhang X, Zang L, Zhao D, Wang C, Wang X, Zhou T, Zhu C, Zhu X. Tomato chlorosis virus p22 interacts with NbBAG5 to inhibit autophagy and regulate virus infection. MOLECULAR PLANT PATHOLOGY 2023; 24:425-435. [PMID: 36828802 PMCID: PMC10098061 DOI: 10.1111/mpp.13311] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/24/2022] [Revised: 01/28/2023] [Accepted: 01/31/2023] [Indexed: 05/03/2023]
Abstract
Tomato chlorosis virus (ToCV) is a member of the genus Crinivirus in the family Closteroviridae. It has a wide host range and wide distribution, causing serious harm to the vegetable industry. The autophagy pathway plays an important role in plant resistance to virus infection. Viruses and plant hosts coevolve in defence and antidefence processes around autophagy. In this study, the interaction between ToCV p22 and Nicotiana benthamiana B-cell lymphoma2-associated athanogenes5 Nicotiana benthamiana (NbBAG5) was examined. Through overexpression and down-regulation of NbBAG5, results showed that NbBAG5 could negatively regulate ToCV infection. NbBAG5 was found to be localized in mitochondria and can change the original localization of ToCV p22, which is colocalized in mitochondria. NbBAG5 inhibited the expression of mitophagy-related genes and the number of autophagosomes, thereby regulating viral infection by affecting mitophagy. In summary, this study demonstrated that ToCV p22 affects autophagy by interacting with NbBAG5, established the association between viral infection, BAG proteins family, and the autophagy pathway, and explained the molecular mechanism by which ToCV p22 interacts with NbBAG5 to inhibit autophagy to regulate viral infection.
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Affiliation(s)
- Kaijie Shang
- College of Plant ProtectionShandong Agricultural UniversityTaiʼanChina
- State Key Laboratory of Crop BiologyCollege of Life Sciences, Shandong Agricultural UniversityTaiʼanChina
| | - Li Xiao
- College of Plant ProtectionShandong Agricultural UniversityTaiʼanChina
| | - Xianping Zhang
- College of Plant ProtectionShandong Agricultural UniversityTaiʼanChina
| | - Lianyi Zang
- College of Plant ProtectionShandong Agricultural UniversityTaiʼanChina
| | - Dan Zhao
- College of Plant ProtectionShandong Agricultural UniversityTaiʼanChina
| | - Chenchen Wang
- State Key Laboratory of Crop BiologyCollege of Life Sciences, Shandong Agricultural UniversityTaiʼanChina
| | - Xipan Wang
- State Key Laboratory of Crop BiologyCollege of Life Sciences, Shandong Agricultural UniversityTaiʼanChina
| | - Tao Zhou
- State Key Laboratory for Agro‐Biotechnology, and Ministry of Agriculture and Rural Affairs, Key Laboratory for Pest Monitoring and Green Management, Department of Plant PathologyChina Agricultural UniversityBeijingChina
| | - Changxiang Zhu
- State Key Laboratory of Crop BiologyCollege of Life Sciences, Shandong Agricultural UniversityTaiʼanChina
| | - Xiaoping Zhu
- College of Plant ProtectionShandong Agricultural UniversityTaiʼanChina
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Chen L, Liu Y, Wu F, Zhang J, Cui X, Wu S, Deng X, Xu M. Citrus tristeza virus Promotes the Acquisition and Transmission of ‘Candidatus Liberibacter Asiaticus’ by Diaphorina citri. Viruses 2023; 15:v15040918. [PMID: 37112898 PMCID: PMC10143984 DOI: 10.3390/v15040918] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2023] [Revised: 03/24/2023] [Accepted: 04/02/2023] [Indexed: 04/07/2023] Open
Abstract
Diaphorina citri Kuwayama (D. citri) is an insect vector of phloem-limited ‘Candidatus Liberibacter asiatus’ (CLas), the presumed pathogen of citrus Huanglongbing (HLB). Recently, our lab has preliminarily found it acquired and transmitted Citrus tristeza virus (CTV), which was previously suggested to be vectored by species of aphids. However, the influences of one of the pathogens on the acquisition and transmission efficiency of the other pathogen remain unknown. In this study, CLas and CTV acquisition and transmission by D. citri at different development stages under field and laboratory conditions were determined. CTV could be detected from the nymphs, adults, and honeydew of D. citri but not from the eggs and exuviates of them. CLas in plants might inhibit CTV acquisition by D. citri as lower CTV–positive rates and CTV titers were detected in D. citri collected from HLB-affected trees compared to those from CLas–free trees. D. citri were more likely to obtain CTV than CLas from host plants co-infected with the two pathogens. Intriguingly, CTV in D. citri facilitated the acquisition and transmission of CLas, but CLas carried by D. citri had no significant effect on the transmission of CTV by the same vector. Molecular detection and microscopy methods confirmed the enrichment of CTV in the midgut after a 72-h acquisition access period. Collectively, these results raise essential scientific questions for further research on the molecular mechanism of pathogen transmission by D. citri and provide new ideas for the comprehensive prevention and control of HLB and CTV.
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Affiliation(s)
- Longtong Chen
- Guangdong Province Key Laboratory of Microbial Signals and Disease Control, Citrus Huanglongbing Research Laboratory, South China Agricultural University, Guangzhou 510642, China
| | - Yangyang Liu
- Guangdong Province Key Laboratory of Microbial Signals and Disease Control, Citrus Huanglongbing Research Laboratory, South China Agricultural University, Guangzhou 510642, China
| | - Fengnian Wu
- School of Life Sciences and Food Engineering, Hanshan Normal University, Chaozhou 521041, China
| | - Jingtian Zhang
- Guangdong Province Key Laboratory of Microbial Signals and Disease Control, Citrus Huanglongbing Research Laboratory, South China Agricultural University, Guangzhou 510642, China
| | - Xiaoqing Cui
- Guangdong Province Key Laboratory of Microbial Signals and Disease Control, Citrus Huanglongbing Research Laboratory, South China Agricultural University, Guangzhou 510642, China
| | - Shitong Wu
- Guangdong Province Key Laboratory of Microbial Signals and Disease Control, Citrus Huanglongbing Research Laboratory, South China Agricultural University, Guangzhou 510642, China
| | - Xiaoling Deng
- Guangdong Province Key Laboratory of Microbial Signals and Disease Control, Citrus Huanglongbing Research Laboratory, South China Agricultural University, Guangzhou 510642, China
| | - Meirong Xu
- Guangdong Province Key Laboratory of Microbial Signals and Disease Control, Citrus Huanglongbing Research Laboratory, South China Agricultural University, Guangzhou 510642, China
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Yang X, Luo X, Zhang Y, Zhang Z, OuYang X, Shi X, Lv X, Li F, Zhang S, Liu Y, Zhang D. Tomato chlorosis virus CPm protein is a pathogenicity determinant and suppresses host local RNA silencing induced by single-stranded RNA. Front Microbiol 2023; 14:1151747. [PMID: 37056753 PMCID: PMC10086252 DOI: 10.3389/fmicb.2023.1151747] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/26/2023] [Accepted: 03/10/2023] [Indexed: 03/30/2023] Open
Abstract
IntroductionTomato chlorosis virus (ToCV) is a typical member of the genus Crinivirus, which severely threatens Solanaceae crops worldwide. The CPm protein encoded by ToCV has been reported to be associated with virus transmission by vectors and is involved in RNA silencing suppression, while the mechanisms remain ambiguous.MethodsHere, ToCV CPm was ectopically expressed by a Potato virus X (PVX) vector and infiltrated into Nicotiana benthamiana wild-type and GFP-transgenic16c plants.ResultsThe phylogenetic analysis showed that the CPm proteins encoded by criniviruses were distinctly divergent in amino acid sequences and predicted conserved domains, and the ToCV CPm protein possesses a conserved domain homologous to the TIGR02569 family protein, which does not occur in other criniviruses. Ectopic expression of ToCV CPm using a PVX vector resulted in severe mosaic symptoms followed by a hypersensitive-like response in N. benthamiana. Furthermore, agroinfiltration assays in N. benthamiana wilt type or GFP-transgenic 16c indicated that ToCV CPm protein effectively suppressed local RNA silencing induced by single-stranded but not double-stranded RNA, which probably resulted from the activity of binding double-stranded but not single-stranded RNA by ToCV CPm protein.ConclusionTaken together, the results of this study suggest that the ToCV CPm protein possesses the dual activities of pathogenicity and RNA silencing, which might inhibit host post-transcriptional gene silencing (PTGS)-mediated resistance and is pivotal in the primary process of ToCV infecting hosts.
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Affiliation(s)
- Xiao Yang
- Longping Branch, College of Biology, Hunan University, Changsha, Hunan, China
| | - Xiangwen Luo
- Longping Branch, College of Biology, Hunan University, Changsha, Hunan, China
- Key Laboratory of Pest Management of Horticultural Crop of Hunan Province, Hunan Plant Protection Institute, Hunan Academy of Agricultural Science, Changsha, Hunan, China
| | - Yu Zhang
- Key Laboratory of Pest Management of Horticultural Crop of Hunan Province, Hunan Plant Protection Institute, Hunan Academy of Agricultural Science, Changsha, Hunan, China
| | - Zhanhong Zhang
- Longping Branch, College of Biology, Hunan University, Changsha, Hunan, China
- Key Laboratory of Pest Management of Horticultural Crop of Hunan Province, Hunan Plant Protection Institute, Hunan Academy of Agricultural Science, Changsha, Hunan, China
| | - Xian OuYang
- Key Laboratory of Pest Management of Horticultural Crop of Hunan Province, Hunan Plant Protection Institute, Hunan Academy of Agricultural Science, Changsha, Hunan, China
| | - Xiaobin Shi
- Longping Branch, College of Biology, Hunan University, Changsha, Hunan, China
- Key Laboratory of Pest Management of Horticultural Crop of Hunan Province, Hunan Plant Protection Institute, Hunan Academy of Agricultural Science, Changsha, Hunan, China
| | - Xiaoyuan Lv
- Technical Center of Changsha Customs, Changsha, Hunan, China
| | - Fan Li
- College of Plant Protection, Yunnan Agricultural University, Kunming, China
| | - Songbai Zhang
- Longping Branch, College of Biology, Hunan University, Changsha, Hunan, China
- Key Laboratory of Pest Management of Horticultural Crop of Hunan Province, Hunan Plant Protection Institute, Hunan Academy of Agricultural Science, Changsha, Hunan, China
- *Correspondence: Songbai Zhang,
| | - Yong Liu
- Longping Branch, College of Biology, Hunan University, Changsha, Hunan, China
- Key Laboratory of Pest Management of Horticultural Crop of Hunan Province, Hunan Plant Protection Institute, Hunan Academy of Agricultural Science, Changsha, Hunan, China
- Yong Liu,
| | - Deyong Zhang
- Longping Branch, College of Biology, Hunan University, Changsha, Hunan, China
- Key Laboratory of Pest Management of Horticultural Crop of Hunan Province, Hunan Plant Protection Institute, Hunan Academy of Agricultural Science, Changsha, Hunan, China
- Deyong Zhang,
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9
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Chaudhary P, Kaur A, Singh B, Kumar S, Hallan V, Nagpal AK. First report of tomato chlorosis virus (ToCV) and detection of other viruses in field-grown tomatoes in North-Western region of India. Virusdisease 2023; 34:56-75. [PMID: 37009255 PMCID: PMC10050630 DOI: 10.1007/s13337-022-00801-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/23/2022] [Accepted: 11/12/2022] [Indexed: 12/23/2022] Open
Abstract
Tomato crop is known to be infected by large number of viruses across the globe causing severe losses in its yield. Accurate information on the distribution and incidence of different viruses is essential to implement virus control strategies. This study provides information on prevalence and distribution of different viruses infecting tomato crop in North-western region of India. Leaf samples of 76 symptomatic tomato and 30 symptomatic and asymptomatic plants of Chenopodium sp. (weed) were collected from eight villages. DAS-ELISA and/or RT-PCR/PCR were used to detect occurrence of nineteen viruses and one viroid in tomatoes. Nine viruses viz. cucumber mosaic virus, groundnut bud necrosis virus, potato virus M, potato virus S, potato virus X, potato virus Y, tomato chlorosis virus, tomato leaf curl New Delhi virus and tomato mosaic virus were detected in 58 of 76 tomato samples. Detection of viruses was confirmed by cloning of specific amplicons followed by sequencing and submission of sequences to the GenBank database. None of the targeted pathogens were found in collected weed samples. Tomato leaf curl New Delhi virus (ToLCNDV) was the most prevalent virus (64.47%) followed by potato virus Y (PVY) (23.68%). Double, triple, quadruple and quintuple infections were also noticed. Phylogenetic analysis of nucleotide sequences was also carried out. Nine viruses infecting tomato crop from North-western region of India were detected. ToLCNDV was most prevalent with highest incidence. To the best of our knowledge, this is the first report of ToCV on tomato from India. Supplementary Information The online version contains supplementary material available at 10.1007/s13337-022-00801-y.
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Affiliation(s)
- Poonam Chaudhary
- Department of Botanical and Environmental Sciences, Guru Nanak Dev University, Amritsar, India
| | - Amritpreet Kaur
- Department of Botanical and Environmental Sciences, Guru Nanak Dev University, Amritsar, India
| | - Balwinder Singh
- Post Graduate Department of Botany, Khalsa College, Amritsar, India
| | - Surender Kumar
- Institute of Himalayan Bioresource Technology, Palampur, India
| | - Vipin Hallan
- Institute of Himalayan Bioresource Technology, Palampur, India
| | - Avinash Kaur Nagpal
- Department of Botanical and Environmental Sciences, Guru Nanak Dev University, Amritsar, India
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10
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Development of a RT-LAMP assay for real-time detection of criniviruses infecting tomato. J Virol Methods 2023; 312:114662. [PMID: 36455691 DOI: 10.1016/j.jviromet.2022.114662] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/25/2022] [Revised: 11/24/2022] [Accepted: 11/27/2022] [Indexed: 11/30/2022]
Abstract
Yellowing symptoms caused by tomato chlorosis virus (ToCV) and tomato infectious chlorosis virus (TICV), both assigned to the genus Crinivirus, resemble nutrient deficiencies. Therefore, early diagnosis of infections will prevent crop damage and the spread of the viruses. In this study, we established a rapid detection method for ToCV and TICV by reverse transcription-loop-mediated isothermal amplification (RT-LAMP). We first designed primer sets for RT-LAMP specific for ToCV and TICV. Next, by selecting the optimum primer set and determining the optimum conditions for the RT-LAMP reaction, each virus was detected within 50 min by piercing the diseased area of a tomato leaf with a toothpick, immersing the toothpick in the reaction solution, and conducting the RT-LAMP reaction. To verify the accuracy of the procedure, 61 tomato leaf samples showing disease symptoms were collected from five regions of Indonesia, and the RT-LAMP results for the samples were identical to those obtained with the commonly used reverse transcription-polymerase chain reaction.
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11
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Tanaka S, Tomitaka Y, Kitamura T, Ohnishi J. A multiplex RT-PCR assay combined with co-extraction of DNA and RNA for simultaneous detection of TYLCV and ToCV in whitefly. J Virol Methods 2021; 301:114431. [PMID: 34921840 DOI: 10.1016/j.jviromet.2021.114431] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2021] [Revised: 12/09/2021] [Accepted: 12/13/2021] [Indexed: 10/19/2022]
Abstract
Tomato yellow leaf curl virus (TYLCV) and tomato chlorosis virus (ToCV) were transmitted by the sweet potato whitefly Bemisia tabaci (Gennadius) and cause serious yield losses on tomato around the world. To understand the actual situation of co-infection of TYLCV and ToCV of individual whiteflies, we developed multiplex RT-PCR combined with co-extraction of DNA and RNA from a single whitefly. First, a nucleic acid extraction method previously reported was modified and adopted to obtain the RNA-DNA mixture including TYLCV and ToCV in a simple form without manual homogenization. Second, primers were newly designed in actin gene of B. tabaci for the confirmation of extraction and PCR success, and multiplex RT-PCR method was developed using specific primer sets for TYLCV, ToCV and B. tabaci. This method enables the detection of TYLCV and ToCV from a single insect and efficient use of field samples obtained using sticky traps. The method will be useful to monitor infection status of TYLCV and ToCV in the field while reducing labor and cost.
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Affiliation(s)
- Sayumi Tanaka
- Institute for Plant Protection, National Agriculture and Food Research Organization, 2421 Suya, Koshi, Kumamoto, 861-1192, Japan.
| | - Yasuhiro Tomitaka
- Institute for Plant Protection, National Agriculture and Food Research Organization, 2-1-18 Kannondai, Tsukuba, Ibaraki, 305-8666, Japan
| | - Toshio Kitamura
- Western Region Agricultural Research Center (Kinki, Chugoku and Shikoku Regions), National Agriculture and Food Research Organization, 6-12-1 Nishifukatsucho, Fukuyama, Hiroshima. 721-8514, Japan
| | - Jun Ohnishi
- Core Technology Research Headquarters, National Agriculture and Food Research Organization, 3-1-1 Kannondai, Tsukuba, Ibaraki, 305-8517, Japan
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12
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Tu L, Wu S, Gan S, Zhao W, Li S, Cheng Z, Zhou Y, Zhu Y, Ji Y. A simplified RT-PCR assay for the simultaneous detection of tomato chlorosis virus and tomato yellow leaf curl virus in tomato. J Virol Methods 2021; 299:114282. [PMID: 34648823 DOI: 10.1016/j.jviromet.2021.114282] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2019] [Revised: 06/10/2021] [Accepted: 09/07/2021] [Indexed: 12/31/2022]
Abstract
Tomato chlorosis virus (ToCV), a species of single-stranded RNA virus belonging to the Crinivirus genus, and Tomato yellow leaf curl virus (TYLCV), a species of single-stranded circular DNA virus belonging to the Begomovirus genus, are two major emerging viruses transmitted by whiteflies and are causing huge losses to tomato production worldwide. To facilitate the simultaneous detection of both viruses in co-infected plants for disease control, a duplex reverse-transcription PCR assay was developed. The assay used three primers, a degenerate reverse primer targeting a conserved region of TYLCV and the RNA2 of ToCV, and two virus-specific forward primers targeting the minor coat protein gene of ToCV and the C3 gene of TYLCV, respectively, to amplify a 762-bp and a 338-bp fragment from ToCV and TYLCV, respectively, in a single reaction. The concentration of the primers, annealing temperature and amplification cycles used in the assay were optimized, and the sensitivity of the assay was assessed. Using this assay, 150 tomato leaf samples collected from the field during 2018 were tested. The results showed that both viruses could be detected simultaneously in co-infected field samples. The assay should benefit the rapid detection of these two viruses in tomato crops and would facilitate early warning of infections for the control of the two virus diseases.
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Affiliation(s)
- Liqin Tu
- Institute of Plant Protection, Jiangsu Academy of Agricultural Sciences, Key Lab of Food Quality and Safety of Jiangsu Province- State Key Laboratory Breeding Base, Nanjing, 210014, China; College of Horticulture, Nanjing Agricultural University, Nanjing, 210095, China
| | - Shuhua Wu
- Institute of Plant Protection, Jiangsu Academy of Agricultural Sciences, Key Lab of Food Quality and Safety of Jiangsu Province- State Key Laboratory Breeding Base, Nanjing, 210014, China
| | - Shexiang Gan
- Institute of Plant Protection, Jiangsu Academy of Agricultural Sciences, Key Lab of Food Quality and Safety of Jiangsu Province- State Key Laboratory Breeding Base, Nanjing, 210014, China
| | - Wenhao Zhao
- Institute of Plant Protection, Jiangsu Academy of Agricultural Sciences, Key Lab of Food Quality and Safety of Jiangsu Province- State Key Laboratory Breeding Base, Nanjing, 210014, China
| | - Shuo Li
- Institute of Plant Protection, Jiangsu Academy of Agricultural Sciences, Key Lab of Food Quality and Safety of Jiangsu Province- State Key Laboratory Breeding Base, Nanjing, 210014, China
| | - Zhaobang Cheng
- Institute of Plant Protection, Jiangsu Academy of Agricultural Sciences, Key Lab of Food Quality and Safety of Jiangsu Province- State Key Laboratory Breeding Base, Nanjing, 210014, China
| | - Yijun Zhou
- Institute of Plant Protection, Jiangsu Academy of Agricultural Sciences, Key Lab of Food Quality and Safety of Jiangsu Province- State Key Laboratory Breeding Base, Nanjing, 210014, China
| | - Yuelin Zhu
- College of Horticulture, Nanjing Agricultural University, Nanjing, 210095, China
| | - Yinghua Ji
- Institute of Plant Protection, Jiangsu Academy of Agricultural Sciences, Key Lab of Food Quality and Safety of Jiangsu Province- State Key Laboratory Breeding Base, Nanjing, 210014, China.
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13
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Navas-Hermosilla E, Fiallo-Olivé E, Navas-Castillo J. Infectious Clones of Tomato Chlorosis Virus: Toward Increasing Efficiency by Introducing the Hepatitis Delta Virus Ribozyme. Front Microbiol 2021; 12:693457. [PMID: 34381428 PMCID: PMC8351799 DOI: 10.3389/fmicb.2021.693457] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2021] [Accepted: 06/04/2021] [Indexed: 11/13/2022] Open
Abstract
Tomato chlorosis virus (ToCV) is an emergent plant pathogen that causes a yellow leaf disorder in tomato and other solanaceous crops. ToCV is a positive-sense, single stranded (ss)RNA bipartite virus with long and flexuous virions belonging to the genus Crininivirus (family Closteroviridae). ToCV is phloem-limited, transmissible by whiteflies, and causes symptoms of interveinal chlorosis, bronzing, and necrosis in the lower leaves of tomato accompanied by a decline in vigor and reduction in fruit yield. The availability of infectious virus clones is a valuable tool for reverse genetic studies that has been long been hampered in the case of closterovirids due to their genome size and complexity. Here, attempts were made to improve the infectivity of the available agroinfectious cDNA ToCV clones (isolate AT80/99-IC from Spain) by adding the hepatitis delta virus (HDV) ribozyme fused to the 3′ end of both genome components, RNA1 and RNA2. The inclusion of the ribozyme generated a viral progeny with RNA1 3′ ends more similar to that present in the clone used for agroinoculation. Nevertheless, the obtained clones were not able to infect tomato plants by direct agroinoculation, like the original clones. However, the infectivity of the clones carrying the HDV ribozyme in Nicotiana benthamiana plants increased, on average, by two-fold compared with the previously available clones.
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Affiliation(s)
- Elisa Navas-Hermosilla
- Instituto de Hortofruticultura Subtropical y Mediterránea "La Mayora," Consejo Superior de Investigaciones Científicas, Universidad de Málaga (IHSM-CSIC-UMA), Algarrobo-Costa, Málaga, Spain
| | - Elvira Fiallo-Olivé
- Instituto de Hortofruticultura Subtropical y Mediterránea "La Mayora," Consejo Superior de Investigaciones Científicas, Universidad de Málaga (IHSM-CSIC-UMA), Algarrobo-Costa, Málaga, Spain
| | - Jesús Navas-Castillo
- Instituto de Hortofruticultura Subtropical y Mediterránea "La Mayora," Consejo Superior de Investigaciones Científicas, Universidad de Málaga (IHSM-CSIC-UMA), Algarrobo-Costa, Málaga, Spain
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14
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Yue H, Huang LP, Lu DYH, Zhang ZH, Zhang Z, Zhang DY, Zheng LM, Gao Y, Tan XQ, Zhou XG, Shi XB, Liu Y. Integrated Analysis of microRNA and mRNA Transcriptome Reveals the Molecular Mechanism of Solanum lycopersicum Response to Bemisia tabaci and Tomato chlorosis virus. Front Microbiol 2021; 12:693574. [PMID: 34239512 PMCID: PMC8258350 DOI: 10.3389/fmicb.2021.693574] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2021] [Accepted: 05/27/2021] [Indexed: 11/13/2022] Open
Abstract
Tomato chlorosis virus (ToCV), is one of the most devastating cultivated tomato viruses, seriously threatened the growth of crops worldwide. As the vector of ToCV, the whitefly Bemisia tabaci Mediterranean (MED) is mainly responsible for the rapid spread of ToCV. The current understanding of tomato plant responses to this virus and B. tabaci is very limited. To understand the molecular mechanism of the interaction between tomato, ToCV and B. tabaci, we adopted a next-generation sequencing approach to decipher miRNAs and mRNAs that are differentially expressed under the infection of B. tabaci and ToCV in tomato plants. Our data revealed that 6199 mRNAs were significantly regulated, and the differentially expressed genes were most significantly associated with the plant-pathogen interaction, the MAPK signaling pathway, the glyoxylate, and the carbon fixation in photosynthetic organisms and photosynthesis related proteins. Concomitantly, 242 differentially expressed miRNAs were detected, including novel putative miRNAs. Sly-miR159, sly-miR9471b-3p, and sly-miR162 were the most expressed miRNAs in each sample compare to control group. Moreover, we compared the similarities and differences of gene expression in tomato plant caused by infection or co-infection of B. tabaci and ToCV. Taken together, the analysis reported in this article lays a solid foundation for further research on the interaction between tomato, ToCV and B. tabaci, and provide evidence for the identification of potential key genes that influences virus transmission in tomato plants.
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Affiliation(s)
- Hao Yue
- Subcollege of Longping, Graduate School of Hunan University, Changsha, China.,Hunan Academy of Agricultural Sciences, Institute of Plant Protection, Changsha, China
| | - Li-Ping Huang
- Subcollege of Longping, Graduate School of Hunan University, Changsha, China.,Hunan Academy of Agricultural Sciences, Institute of Plant Protection, Changsha, China
| | - Ding-Yi-Hui Lu
- Subcollege of Longping, Graduate School of Hunan University, Changsha, China.,Hunan Academy of Agricultural Sciences, Institute of Plant Protection, Changsha, China
| | - Zhan-Hong Zhang
- Institute of Vegetable, Hunan Academy of Agricultural Sciences, Changsha, China
| | - Zhuo Zhang
- Hunan Academy of Agricultural Sciences, Institute of Plant Protection, Changsha, China
| | - De-Yong Zhang
- Hunan Academy of Agricultural Sciences, Institute of Plant Protection, Changsha, China
| | - Li-Min Zheng
- Hunan Academy of Agricultural Sciences, Institute of Plant Protection, Changsha, China
| | - Yang Gao
- Hunan Academy of Agricultural Sciences, Institute of Plant Protection, Changsha, China
| | - Xin-Qiu Tan
- Hunan Academy of Agricultural Sciences, Institute of Plant Protection, Changsha, China
| | - Xu-Guo Zhou
- Department of Entomology, University of Kentucky, Lexington, KY, United States
| | - Xiao-Bin Shi
- Subcollege of Longping, Graduate School of Hunan University, Changsha, China.,Hunan Academy of Agricultural Sciences, Institute of Plant Protection, Changsha, China
| | - Yong Liu
- Subcollege of Longping, Graduate School of Hunan University, Changsha, China.,Hunan Academy of Agricultural Sciences, Institute of Plant Protection, Changsha, China
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15
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Rivarez MPS, Vučurović A, Mehle N, Ravnikar M, Kutnjak D. Global Advances in Tomato Virome Research: Current Status and the Impact of High-Throughput Sequencing. Front Microbiol 2021; 12:671925. [PMID: 34093492 PMCID: PMC8175903 DOI: 10.3389/fmicb.2021.671925] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2021] [Accepted: 04/12/2021] [Indexed: 11/30/2022] Open
Abstract
Viruses cause a big fraction of economically important diseases in major crops, including tomato. In the past decade (2011–2020), many emerging or re-emerging tomato-infecting viruses were reported worldwide. In this period, 45 novel viral species were identified in tomato, 14 of which were discovered using high-throughput sequencing (HTS). In this review, we first discuss the role of HTS in these discoveries and its general impact on tomato virome research. We observed that the rate of tomato virus discovery is accelerating in the past few years due to the use of HTS. However, the extent of the post-discovery characterization of viruses is lagging behind and is greater for economically devastating viruses, such as the recently emerged tomato brown rugose fruit virus. Moreover, many known viruses still cause significant economic damages to tomato production. The review of databases and literature revealed at least 312 virus, satellite virus, or viroid species (in 22 families and 39 genera) associated with tomato, which is likely the highest number recorded for any plant. Among those, here, we summarize the current knowledge on the biology, global distribution, and epidemiology of the most important species. Increasing knowledge on tomato virome and employment of HTS to also study viromes of surrounding wild plants and environmental samples are bringing new insights into the understanding of epidemiology and ecology of tomato-infecting viruses and can, in the future, facilitate virus disease forecasting and prevention of virus disease outbreaks in tomato.
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Affiliation(s)
- Mark Paul Selda Rivarez
- Department of Biotechnology and Systems Biology, National Institute of Biology, Ljubljana, Slovenia.,Jožef Stefan International Postgraduate School, Ljubljana, Slovenia
| | - Ana Vučurović
- Department of Biotechnology and Systems Biology, National Institute of Biology, Ljubljana, Slovenia.,Faculty of Agriculture, University of Belgrade, Belgrade, Serbia
| | - Nataša Mehle
- Department of Biotechnology and Systems Biology, National Institute of Biology, Ljubljana, Slovenia
| | - Maja Ravnikar
- Department of Biotechnology and Systems Biology, National Institute of Biology, Ljubljana, Slovenia.,School for Viticulture and Enology, University of Nova Gorica, Nova Gorica, Slovenia
| | - Denis Kutnjak
- Department of Biotechnology and Systems Biology, National Institute of Biology, Ljubljana, Slovenia
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16
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Esquivel-Fariña A, Rezende JAM, Wintermantel WM, Hladky LJ, Bampi D. Natural Infection Rate of Known Tomato chlorosis virus-Susceptible Hosts and the Influence of the Host Plant on the Virus Relationship With Bemisia tabaci MEAM1. PLANT DISEASE 2021; 105:1390-1397. [PMID: 33107791 DOI: 10.1094/pdis-08-20-1642-re] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
Tomato chlorosis virus (ToCV; genus Crinivirus, family Closteroviridae) was identified in tomato crops in São Paulo State, Brazil, in 2006. Management strategies to control external sources of inoculum are necessary, because chemical control of the whitefly vector Bemisia tabaci Middle East-Asia Minor 1 (MEAM1) has not efficiently prevented virus infections and no commercial tomato varieties or hybrids are resistant to this crinivirus. We first evaluated the natural infection rate of some known wild and cultivated ToCV-susceptible hosts and their attractiveness for B. tabaci MEAM1 oviposition. Physalis angulata was the most susceptible to natural infection in all six exposures in 2018 and 2019. No plants of Capsicum annuum 'Dahra' or Chenopodium album became infected. Solanum melongena 'Napoli' had only two infected plants of 60 exposed. Capsicum annuum and Chenopodium album were the least preferred, and Nicotiana tabacum and S. melongena were the most preferred for whitefly oviposition. In addition, from 2016 to 2019, we surveyed different tomato crops and the surrounding vegetation to identify ToCV in weeds and cultivated plants in the region of Sumaré, São Paulo State. Only S. americanum, vila vila (S. sisymbriifolium), and Chenopodium album were found naturally infected, with incidences of 18, 20, and 1.4%, respectively. Finally, we estimated the ToCV titer (U.S. and Brazilian isolates ToCV-FL and ToCV-SP, respectively) by quantitative reverse transcription PCR in different ToCV-susceptible host plants and evaluated the relationship between virus acquisition and transmission by B. tabaci MEAM1. The results clearly showed significant differences in ToCV concentrations in the tissues of ToCV-susceptible host plants, which appeared to be influenced by the virus isolate. The concentration of the virus in plant tissues, in turn, directly influenced the ToCV-B. tabaci MEAM1 relationship and subsequent transmission to tomato plants. To minimize or prevent damage from tomato yellowing disease through management of external sources of ToCV, it is necessary to correctly identify potentially important ToCV-susceptible hosts in the vicinity of new plantings.
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Affiliation(s)
- Arnaldo Esquivel-Fariña
- Department of Phytopathology and Nematology, Luiz de Queiroz College of Agriculture, University of São Paulo (ESALQ/USP), Piracicaba, Brazil
| | - Jorge Alberto Marques Rezende
- Department of Phytopathology and Nematology, Luiz de Queiroz College of Agriculture, University of São Paulo (ESALQ/USP), Piracicaba, Brazil
| | | | - Laura Jenkins Hladky
- U.S. Department of Agriculture Agricultural Research Service, Salinas, CA, U.S.A
| | - Daiana Bampi
- Department of Phytopathology and Nematology, Luiz de Queiroz College of Agriculture, University of São Paulo (ESALQ/USP), Piracicaba, Brazil
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17
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Li J, Wang JC, Ding TB, Chu D. Synergistic Effects of a Tomato chlorosis virus and Tomato yellow leaf curl virus Mixed Infection on Host Tomato Plants and the Whitefly Vector. FRONTIERS IN PLANT SCIENCE 2021; 12:672400. [PMID: 34135928 PMCID: PMC8201402 DOI: 10.3389/fpls.2021.672400] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/25/2021] [Accepted: 05/07/2021] [Indexed: 05/12/2023]
Abstract
In China, Tomato chlorosis virus (ToCV) and Tomato yellow leaf curl virus (TYLCV) are widely present in tomato plants. The epidemiology of these viruses is intimately associated with their vector, the whitefly (Bemisia tabaci MED). However, how a ToCV+TYLCV mixed infection affects viral acquisition by their vector remains unknown. In this study, we examined the growth parameters of tomato seedlings, including disease symptoms and the heights and weights of non-infected, singly infected and mixed infected tomato plants. Additionally, the spatio-temporal dynamics of the viruses in tomato plants, and the viral acquisition and transmission by B. tabaci MED, were determined. The results demonstrated that: (i) ToCV+TYLCV mixed infections induced tomato disease synergism, resulting in a high disease severity index and decreased stem heights and weights; (ii) as the disease progressed, TYLCV accumulated more in upper leaves of TYLCV-infected tomato plants than in lower leaves, whereas ToCV accumulated less in upper leaves of ToCV-infected tomato plants than in lower leaves; (iii) viral accumulation in ToCV+TYLCV mixed infected plants was greater than in singly infected plants; and (iv) B. tabaci MED appeared to have a greater TYLCV, but a lower ToCV, acquisition rate from mixed infected plants compared with singly infected plants. However, mixed infections did not affect transmission by whiteflies. Thus, ToCV+TYLCV mixed infections may induce synergistic disease effects in tomato plants.
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18
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Gaafar YZA, Ziebell H. Novel targets for engineering Physostegia chlorotic mottle and tomato brown rugose fruit virus-resistant tomatoes: in silico prediction of tomato microRNA targets. PeerJ 2020; 8:e10096. [PMID: 33194382 PMCID: PMC7597636 DOI: 10.7717/peerj.10096] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/03/2020] [Accepted: 09/14/2020] [Indexed: 11/20/2022] Open
Abstract
Background Physostegia chlorotic mottle virus (PhCMoV; genus: Alphanucleorhabdovirus, family: Rhabdoviridae) and tomato brown rugose fruit virus (ToBRFV; genus: Tobamovirus, family: Virgaviridae) are newly emerging plant viruses that have a dramatic effect on tomato production. Among various known virus-control strategies, RNAi-mediated defence has shown the potential to protect plants against various pathogens including viral infections. Micro(mi)RNAs play a major role in RNAi-mediated defence. Methods Using in silico analyses, we investigated the possibility of tomato-encoded miRNAs (TomiRNA) to target PhCMoV and ToBRFV genomes using five different algorithms, i.e., miRanda, RNAhybrid, RNA22, Tapirhybrid and psRNATarget. Results The results revealed that 14 loci on PhCMoV and 10 loci on ToBRFV can be targeted by the TomiRNAs based on the prediction of at least three algorithms. Interestingly, one TomiRNA, miR6026, can target open reading frames from both viruses, i.e., the phosphoprotein encoding gene of PhCMoV, and the two replicase components of ToBRFV. There are currently no commercially available PhCMoV- or ToBRFV-resistant tomato varieties, therefore the predicted data provide useful information for the development of PhCMoV- and ToBFRV-resistant tomato plants.
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Affiliation(s)
- Yahya Zakaria Abdou Gaafar
- Institute for Epidemiology and Pathogen Diagnostics, Julius Kühn Institute (JKI) -Federal Research Centre for Cultivated Plants, Braunschweig, Lower Saxony, Germany
| | - Heiko Ziebell
- Institute for Epidemiology and Pathogen Diagnostics, Julius Kühn Institute (JKI) -Federal Research Centre for Cultivated Plants, Braunschweig, Lower Saxony, Germany
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19
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Wang YJ, Wang HL, Wang XW, Liu SS. Transcriptome analysis and comparison reveal divergence between the Mediterranean and the greenhouse whiteflies. PLoS One 2020; 15:e0237744. [PMID: 32841246 PMCID: PMC7447059 DOI: 10.1371/journal.pone.0237744] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2020] [Accepted: 07/31/2020] [Indexed: 12/24/2022] Open
Abstract
Both the Mediterranean (MED) species of the Bemisia tabaci whitefly complex and the greenhouse whitefly (Trialeurodes vaporariorum, TV) are important agricultural pests. The two species of whiteflies differ in many aspects such as morphology, geographical distribution, host plant range, plant virus transmission, and resistance to insecticides. However, the molecular basis underlying their differences remains largely unknown. In this study, we analyzed the genetic divergences between the transcriptomes of MED and TV. In total, 2,944 pairs of orthologous genes were identified. The average identity of amino acid sequences between the two species is 93.6%. The average nonsynonymous (Ka) and synonymous (Ks) substitution rates and the ratio of Ka/Ks of the orthologous genes are 0.0389, 2.23 and 0.0204, respectively. The low average Ka/Ks ratio indicates that orthologous genes tend to be under strong purified selection. The most divergent gene classes are related to the metabolisms of xenobiotics, cofactors, vitamins and amino acids, and this divergence may underlie the different biological characteristics between the two species of whiteflies. Genes of differential expression between the two species are enriched in carbohydrate metabolism and regulation of autophagy. These findings provide molecular clues to uncover the biological and molecular differences between the two species of whiteflies.
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Affiliation(s)
- Yu-Jun Wang
- Ministry of Agriculture Key Laboratory of Agricultural Entomology, Institute of Insect Sciences, Zhejiang University, Hangzhou, China
| | - Hua-Ling Wang
- Ministry of Agriculture Key Laboratory of Agricultural Entomology, Institute of Insect Sciences, Zhejiang University, Hangzhou, China
| | - Xiao-Wei Wang
- Ministry of Agriculture Key Laboratory of Agricultural Entomology, Institute of Insect Sciences, Zhejiang University, Hangzhou, China
| | - Shu-Sheng Liu
- Ministry of Agriculture Key Laboratory of Agricultural Entomology, Institute of Insect Sciences, Zhejiang University, Hangzhou, China
- * E-mail:
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20
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Maluta NKP, Lopes JRS, Fiallo-Olivé E, Navas-Castillo J, Lourenção AL. Foliar Spraying of Tomato Plants with Systemic Insecticides: Effects on Feeding Behavior, Mortality and Oviposition of Bemisia tabaci (Hemiptera: Aleyrodidae) and Inoculation Efficiency of Tomato Chlorosis Virus. INSECTS 2020; 11:insects11090559. [PMID: 32842573 PMCID: PMC7565682 DOI: 10.3390/insects11090559] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/29/2020] [Revised: 08/18/2020] [Accepted: 08/20/2020] [Indexed: 01/22/2023]
Abstract
Simple Summary The whitefly Bemisia tabaci (Hemiptera: Aleyrodidae) causes serious losses to vegetable, ornamental and fiber crops, including tomato plants, mainly as a vector of economically important viruses. Among the most important viruses affecting tomato is the tomato chlorosis virus (ToCV) (Closteroviridae: Crinivirus), which is semi-persistently transmitted by whiteflies. Effective management of this pest is crucial to reduce the spread of vector-borne diseases and to reduce crop damage and losses. In this study we evaluated the effect of systemic insecticides (cyantraniliprole, acetamiprid and flupyradifurone) on the feeding behavior, mortality and oviposition of B. tabaci MEAM1 and their ability to interfere with the inoculation of ToCV in tomato plants. Our findings indicate that systemic insecticides cause high mortality when compared to untreated plants. Also, we found that flupyradifurone affects stylet activities of B. tabaci and significantly reduce phloem ingestion, a behavior that is closely linked to the transmission of ToCV. Overall, our findings indicate that flupyradifurone may contribute to management of this pest and ToCV in tomato crops. Abstract Tomato chlorosis virus (ToCV) is a phloem-limited crinivirus transmitted by whiteflies and seriously affects tomato crops worldwide. As with most vector-borne viral diseases, no cure is available, and the virus is managed primarily by the control of the vector. This study determined the effects of the foliar spraying with the insecticides, acetamiprid, flupyradifurone and cyantraniliprole, on the feeding behavior, mortality, oviposition and transmission efficiency of ToCV by B. tabaci MEAM1 in tomato plants. To evaluate mortality, oviposition and ToCV transmission in greenhouse conditions, viruliferous whiteflies were released on insecticide-treated plants at different time points (3, 24 and 72 h; 7 and 14 days) after spraying. Insect mortality was higher on plants treated with insecticides; however, only cyantraniliprole and flupyradifurone differed from them in all time points. The electrical penetration graph (DC-EPG) technique was used to monitor stylet activities of viruliferous B. tabaci in tomato plants 72 h after insecticide application. Only flupyradifurone affected the stylet activities of B. tabaci, reducing the number and duration of intracellular punctures (pd) and ingestion of phloem sap (E2), a behavior that possibly resulted in the lower percentage of ToCV transmission in this treatment (0–60%) in relation to the control treatment (60–90%) over the periods evaluated. Our results indicate that flupyradifurone may contribute to management of this pest and ToCV in tomato crops.
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Affiliation(s)
- Nathalie Kristine Prado Maluta
- Agronomic Institute (IAC), Centro de Fitossanidade, 13020-902 Campinas, SP, Brazil;
- Correspondence: ; Tel.: +55-19-3429-4199
| | - João Roberto Spotti Lopes
- Department of Entomology and Acarology, ESALQ, University of São Paulo, 13418-900 Piracicaba, SP, Brazil;
| | - Elvira Fiallo-Olivé
- Instituto de Hortofruticultura Subtropical y Mediterránea ‘La Mayora’, Universidad de Málaga - Consejo Superior de Investigaciones Científicas (IHSM-UMA-CSIC), 29750 Algarrobo-Costa, Málaga, Spain; (E.F.-O.); (J.N.-C.)
| | - Jesús Navas-Castillo
- Instituto de Hortofruticultura Subtropical y Mediterránea ‘La Mayora’, Universidad de Málaga - Consejo Superior de Investigaciones Científicas (IHSM-UMA-CSIC), 29750 Algarrobo-Costa, Málaga, Spain; (E.F.-O.); (J.N.-C.)
| | - André Luiz Lourenção
- Agronomic Institute (IAC), Centro de Fitossanidade, 13020-902 Campinas, SP, Brazil;
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21
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Non-Destructive Early Detection and Quantitative Severity Stage Classification of Tomato Chlorosis Virus (ToCV) Infection in Young Tomato Plants Using Vis–NIR Spectroscopy. REMOTE SENSING 2020. [DOI: 10.3390/rs12121920] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
Tomato chlorosis virus (ToCV) is a serious, emerging tomato pathogen that has a significant impact on the quality and quantity of tomato production worldwide. Detecting ToCV via means of spectral measurements in an early pre-symptomatic stage offers an alternative to the existing laboratory methods, leading to better disease management in the field. In this study, leaf spectra from healthy and diseased leaves were measured with a spectrometer. The diseased leaves were subjected to RT-qPCR for the detection and quantification of the titer of ToCV. Neighborhood component analysis (NCA) algorithm was employed for the feature selection of the effective wavelengths and the most important vegetation indices out of the 24 that were tested. Two machine learning methods, namely XY-fusion network (XY-F) and multilayer perceptron with automated relevance determination (MLP–ARD), were employed for the estimation of the disease existence and viral load in the tomato leaves. The results showed that before outlier elimination, the MLP–ARD classifier generally outperformed the XY-F network with an overall accuracy of 92.1% against 88.3% for the XY-F. Outlier elimination contributed to the performance of the classifiers as the overall accuracy for both XY-F and MLP–ARD reached 100%.
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22
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Zu G, Gan X, Xie D, Yang H, Zhang A, Li S, Hu D, Song B. Design, Synthesis, and Anti-ToCV Activity of Novel 4(3 H)-Quinazolinone Derivatives Bearing Dithioacetal Moiety. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2020; 68:5539-5544. [PMID: 32323987 DOI: 10.1021/acs.jafc.0c00086] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
Tomato chlorosis virus (ToCV) has caused great harm to the production of tomato worldwide. To develop efficient anti-ToCV agents, some novel 4(3H)-quinazolinone derivatives containing dithioacetal were designed and synthesized, and their anti-ToCV activities were evaluated by microscale thermophoresis (MST) using ToCV coat protein (ToCV-CP) as a new target. The results showed that some compounds had a strong binding capacity to ToCV-CP. In particular, compounds C5 and C22 have an excellent binding capacity to ToCV-CP, with binding constant values of 0.24 and 0.25 μM, respectively. Additionally, reduced ToCV-CP gene expression levels of 81.05 and 87.59% could be achieved when tomato was treated with compounds C5 and C22, respectively, which were obviously higher than the levels after ningnanmycin (NNM) treatment (43.88%) and lead compound Xiangcaoliusuobingmi (XCLSBM) treatment (63.56%). Therefore, this work indicates that 4(3H)-quinazolinone derivatives containing dithioacetal moiety can be used as novel anti-ToCV agents.
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Affiliation(s)
- Guangcheng Zu
- State Key Laboratory Breeding Base of Green Pesticide and Agricultural Bioengineering, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Guizhou University, Huaxi District, Guiyang 550025, China
| | - Xiuhai Gan
- State Key Laboratory Breeding Base of Green Pesticide and Agricultural Bioengineering, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Guizhou University, Huaxi District, Guiyang 550025, China
| | - Dandan Xie
- State Key Laboratory Breeding Base of Green Pesticide and Agricultural Bioengineering, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Guizhou University, Huaxi District, Guiyang 550025, China
| | - Huanyu Yang
- State Key Laboratory Breeding Base of Green Pesticide and Agricultural Bioengineering, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Guizhou University, Huaxi District, Guiyang 550025, China
| | - Awei Zhang
- State Key Laboratory Breeding Base of Green Pesticide and Agricultural Bioengineering, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Guizhou University, Huaxi District, Guiyang 550025, China
| | - Shaoyuan Li
- State Key Laboratory Breeding Base of Green Pesticide and Agricultural Bioengineering, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Guizhou University, Huaxi District, Guiyang 550025, China
| | - Deyu Hu
- State Key Laboratory Breeding Base of Green Pesticide and Agricultural Bioengineering, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Guizhou University, Huaxi District, Guiyang 550025, China
| | - Baoan Song
- State Key Laboratory Breeding Base of Green Pesticide and Agricultural Bioengineering, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Guizhou University, Huaxi District, Guiyang 550025, China
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23
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Ran L, Yang H, Luo L, Huang M, Hu D. Discovery of Potent and Novel Quinazolinone Sulfide Inhibitors with Anti-ToCV Activity. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2020; 68:5302-5308. [PMID: 32298097 DOI: 10.1021/acs.jafc.0c00686] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
A series of novel quinazolinone sulfide derivatives containing a dithioacetal moiety were designed and synthesized using Tomato chlorosis virus coat protein (ToCVCP) as a potential drug target, and the inhibitory effect of ToCV was systematically evaluated in vitro and in vivo. The experimental results showed that most of the compounds presented a strong affinity. Notably, the binding abilities of compounds D8 and D16 to ToCVCP both reached a micromolar level, which were 0.19 and 0.83 μM, respectively. The relative expression level of ToCVCP gene was detected using real-time quantitative polymerase chain reaction in Nicotiana benthamiana. Compounds D8 and D16 significantly reduced the relative expression level of ToCVCP gene by 93.34 and 83.47%, respectively, which were better than those of conventional antiviral agents. This study lays a good foundation for the structural design and modification of quinazolinone sulfide derivatives as anti-ToCV drugs.
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Affiliation(s)
- Leilei Ran
- State Key Laboratory Breeding Base of Green Pesticide and Agricultural Bioengineering, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Guizhou University, Huaxi District, Guiyang 550025, China
| | - Huanyu Yang
- State Key Laboratory Breeding Base of Green Pesticide and Agricultural Bioengineering, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Guizhou University, Huaxi District, Guiyang 550025, China
| | - Liangzhi Luo
- State Key Laboratory Breeding Base of Green Pesticide and Agricultural Bioengineering, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Guizhou University, Huaxi District, Guiyang 550025, China
| | - Maoxi Huang
- State Key Laboratory Breeding Base of Green Pesticide and Agricultural Bioengineering, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Guizhou University, Huaxi District, Guiyang 550025, China
| | - Deyu Hu
- State Key Laboratory Breeding Base of Green Pesticide and Agricultural Bioengineering, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Guizhou University, Huaxi District, Guiyang 550025, China
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24
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Ruiz Garcia L, Janssen D. Epidemiology and control of emerging criniviruses in bean. Virus Res 2020; 280:197902. [PMID: 32097709 DOI: 10.1016/j.virusres.2020.197902] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2019] [Revised: 02/21/2020] [Accepted: 02/21/2020] [Indexed: 01/05/2023]
Abstract
During the last two decades, new criniviruses emerged in green bean crops in the south-east of Spain. Bean yellow disorder virus (BnYDV) was first detected in 2003 and caused major economic damage in crops grown in greenhouses. It was characterized as the first crinivirus to infect a member species of the Leguminosae family. Symptoms induced during BnYDV infection include interveinal chlorosis and yellowing on leaves, and reduced fruit yield and quality. Similar symptoms, although more severe, were observed in bean crops in the same region during the fall of 2011. From that moment on, BnYDV was not detected anymore in diseased plants, but instead lettuce chlorosis virus (LCV) was associated with the diseased plants. Previously, LCV was detected only in California, USA, infecting lettuce and sugarbeets. The host range and partial genomic sequences lead to the description of the new strain, LCV-SP. The complete sequence of its genome revealed the virus as a recombinant of BnYDV and LCV, in which the latter had lost two ORFs in the RNA1 of the bipartite genome and had acquired two homologue ORFs from BnYDV. Both viruses are transmitted by the whitefly Bemisia tabaci. When compared with other crinivirus pathosystems, the transmission efficiency of BnYDV to its primary host bean, is among the highest, and its persistence in the vector among the longest, up to 9 days. The host range of BnYDV s restricted to several crop species of the Leguminosae: common bean (Phaseolus vulgaris), pea (Pisum sativum), tirabeque (P. sativum subsp. sativum var. macrocarpon), lentil (Lens culinaris) and faba bean (Vicia faba). LCV-SP is also able to infect green bean plants but not lettuce, its original host, probably following its recombinant nature. Symptoms and epidemiology of the bean criniviruses are compared with similar pathosystems that occur in the same region and that involve cucurbit yellow stunting disorder virus and tomato chlorosis virus, infecting cucurbitaceous and solanaceous crops, respectively. Control of the criniviruses in bean crops will depend on efficient control of the vector. Physical control with greenhouses that prevent viruliferous whiteflies from gaining access to crops reduces BnYDV infection in plants and loss of production. Integrated pest management in beans would be preferred and the use of natural enemies to reduce secondary spread within greenhouses must be investigated.
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Affiliation(s)
| | - Dirk Janssen
- IFAPA, Camino de San Nicolas 1, La Mojonera 04745, Spain.
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25
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Yang H, Zu G, Liu Y, Xie D, Gan X, Song B. Tomato Chlorosis Virus Minor Coat Protein as a Novel Target To Screen Antiviral Drugs. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2020; 68:3425-3433. [PMID: 32091891 DOI: 10.1021/acs.jafc.9b08215] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
Minor coat protein (mCP), an important component of tomato chlorosis virus (ToCV), plays a significant role in the process of virus assembly and movement and is directly related to the virus-insect transmission. Therefore, ToCV mCP could be considered as a potent target for anti-ToCV drugs. In this study, ToCV mCP was first cloned, expressed, purified, and a novel target to screen the antiviral agents. The results showed that some antiviral compounds bound to ToCV mCP with strongly affinities in vitro, including quinazoline derivatives 4a and 4b, Ningnanmycin, and Ribavirin. Subsequently, three-dimensional-quantitative structure-activity relationship (3D-QSAR) analysis was performed based on the binding affinities, and the model indicated that 4a and 4b had indeed stronger binding effects on ToCV mCP than other quinazoline derivatives. Finally, the anti-ToCV activities of compounds 4a and 4b were evaluated by quantitative real-time polymerase chain reaction in vivo. Compounds 4a and 4b inhibited infection of ToCV in the host and as well as reduced the level of ToCV mCP gene expression. Thus, ToCV mCP can be used as a novel drug target for screening anti-ToCV agents, and the ligand-based 3D-QSAR analysis of quinazoline derivatives provided new insights into the design and optimization of novel anti-ToCV drug molecules based on ToCV mCP.
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Affiliation(s)
- Huanyu Yang
- State Key Laboratory Breeding Base of Green Pesticide and Agricultural Bioengineering, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Guizhou University, Huaxi District, Guiyang 550025, China
| | - Guangcheng Zu
- State Key Laboratory Breeding Base of Green Pesticide and Agricultural Bioengineering, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Guizhou University, Huaxi District, Guiyang 550025, China
| | - Yuewen Liu
- State Key Laboratory Breeding Base of Green Pesticide and Agricultural Bioengineering, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Guizhou University, Huaxi District, Guiyang 550025, China
| | - Dandan Xie
- State Key Laboratory Breeding Base of Green Pesticide and Agricultural Bioengineering, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Guizhou University, Huaxi District, Guiyang 550025, China
| | - Xiuhai Gan
- State Key Laboratory Breeding Base of Green Pesticide and Agricultural Bioengineering, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Guizhou University, Huaxi District, Guiyang 550025, China
| | - Baoan Song
- State Key Laboratory Breeding Base of Green Pesticide and Agricultural Bioengineering, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Guizhou University, Huaxi District, Guiyang 550025, China
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26
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Kimathi RH, Wilisiani F, Mashiko T, Neriya Y, Miinda AE, Nishigawa H, Natsuaki T. First report of Tomato chlorosis virus infecting tomato in Kenya. SCIENTIFIC AFRICAN 2020. [DOI: 10.1016/j.sciaf.2020.e00286] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022] Open
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27
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Fiallo-Olivé E, Pan LL, Liu SS, Navas-Castillo J. Transmission of Begomoviruses and Other Whitefly-Borne Viruses: Dependence on the Vector Species. PHYTOPATHOLOGY 2020; 110:10-17. [PMID: 31544592 DOI: 10.1094/phyto-07-19-0273-fi] [Citation(s) in RCA: 63] [Impact Index Per Article: 15.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
Most plant viruses require a biological vector to spread from plant to plant in nature. Among biological vectors for plant viruses, hemipteroid insects are the most common, including phloem-feeding aphids, whiteflies, mealybugs, planthoppers, and leafhoppers. A majority of the emerging diseases challenging agriculture worldwide are insect borne, with those transmitted by whiteflies (Hemiptera: Aleyrodidae) topping the list. Most damaging whitefly-transmitted viruses include begomoviruses (Geminiviridae), criniviruses (Closteroviridae), and torradoviruses (Secoviridae). Among the whitefly vectors, Bemisia tabaci, now recognized as a complex of cryptic species, is the most harmful in terms of virus transmission. Here, we review the available information on the differential transmission efficiency of begomoviruses and other whitefly-borne viruses by different species of whiteflies, including the cryptic species of the B. tabaci complex. In addition, we summarize the factors affecting transmission of viruses by whiteflies and point out some future research prospects.
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Affiliation(s)
- Elvira Fiallo-Olivé
- Instituto de Hortofruticultura Subtropical y Mediterránea "La Mayora", Consejo Superior de Investigaciones Científicas-Universidad de Málaga (IHSM-CSIC-UMA), 29750 Algarrobo-Costa, Málaga, Spain
| | - Li-Long Pan
- Ministry of Agriculture Key Lab of Molecular Biology of Crop Pathogens and Insects, Institute of Insect Sciences, Zhejiang University, 310058 Hangzhou, China
| | - Shu-Sheng Liu
- Ministry of Agriculture Key Lab of Molecular Biology of Crop Pathogens and Insects, Institute of Insect Sciences, Zhejiang University, 310058 Hangzhou, China
| | - Jesús Navas-Castillo
- Instituto de Hortofruticultura Subtropical y Mediterránea "La Mayora", Consejo Superior de Investigaciones Científicas-Universidad de Málaga (IHSM-CSIC-UMA), 29750 Algarrobo-Costa, Málaga, Spain
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28
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Silencing of Odorant-Binding Protein Gene OBP3 Using RNA Interference Reduced Virus Transmission of Tomato Chlorosis Virus. Int J Mol Sci 2019; 20:ijms20204969. [PMID: 31600869 PMCID: PMC6834158 DOI: 10.3390/ijms20204969] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2019] [Revised: 09/27/2019] [Accepted: 09/30/2019] [Indexed: 11/17/2022] Open
Abstract
Tomato chlorosis virus (ToCV) is widespread, seriously impacting tomato production throughout the world. ToCV is semi-persistently transmitted by Bemisia tabaci (Gennadius) (Hemiptera: Aleyrodidae). Currently, insect olfaction is being studied to develop novel pest control technologies to effectively control B. tabaci and whitefly-borne virus diseases. Despite current research efforts, no report has been published on the role of odorant-binding proteins (OBPs) in insect preference under the influence of plant virus. Our previous research showed that viruliferous B. tabaci preferred healthy plants at 48 h after virus acquisition. In this study, we determined the effect of OBPs on the host preference interactions of ToCV and whiteflies. Our results show that with the increase in acquisition time, the OBP gene expressions changed differently, and the OBP3 gene expression showed a trend of first rising and then falling, and reached the maximum at 48 h. These results indicate that OBP3 may participate in the host preference of viruliferous whiteflies to healthy plants. When the expression of the OBP3 gene was knocked down by an RNA interference (RNAi) technique, viruliferous Mediterranean (MED) showed no preference and the ToCV transmission rate was reduced by 83.3%. We conclude that OBP3 is involved in the detection of plant volatiles by viruliferous MED. Our results provide a theoretical basis and technical support for clarifying the transmission mechanism of ToCV by B. tabaci and could provide new avenues for controlling this plant virus and its vectors.
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Pereira LS, Lourenção AL, Salas FJS, Bento JMS, Rezende JAM, Peñaflor MFGV. Infection by the semi-persistently transmitted Tomato chlorosis virus alters the biology and behaviour of Bemisia tabaci on two potato clones. BULLETIN OF ENTOMOLOGICAL RESEARCH 2019; 109:604-611. [PMID: 30616696 DOI: 10.1017/s0007485318000974] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
Insect-borne plant viruses usually alter the interactions between host plant and insect vector in ways conducive to their transmission ('host manipulation hypothesis'). Most studies have tested this hypothesis with persistently and non-persistently transmitted viruses, while few have examined semi-persistently transmitted viruses. The crinivirus Tomato chlorosis virus (ToCV) is semi-persistently transmitted virus by whiteflies, and has been recently reported infecting potato plants in Brazil, where Bemisia tabaci Middle East Asia Minor 1 (MEAM1) is a competent vector. We investigated how ToCV infection modifies the interaction between potato plants and B. tabaci in ways that increase the likelihood of ToCV transmission, in two clones, one susceptible ('Agata') and the other moderately resistant (Bach-4) to B. tabaci. Whiteflies alighted and laid more eggs on ToCV-infected plants than mock-inoculated plants of Bach-4. When non-viruliferous whiteflies were released on ToCV-infected plants near mock-inoculated plants, adults moved more intensely towards non-infected plants than in the reverse condition for both clones. Feeding on ToCV-infected plants reduced egg-incubation period in both clones, but the egg-adult cycle was similar for whiteflies fed on ToCV-infected and mock-inoculated plants. Our results demonstrated that ToCV infection in potato plants alters B. tabaci behaviour and development in distinct ways depending on the host clone, with potential implications for ToCV spread.
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Affiliation(s)
- L S Pereira
- Instituto Agronômico (IAC), Centro de Fitossanidade, Av. Barão de Itapura, 1481, 13020-902 Campinas, SP, Brazil
| | - A L Lourenção
- Instituto Agronômico (IAC), Centro de Fitossanidade, Av. Barão de Itapura, 1481, 13020-902 Campinas, SP, Brazil
| | - F J S Salas
- Instituto Biológico (IB), Laboratório de Estudo Vetores, Av. Conselheiro Rodrigues Alves, 1.252, 04014-900 São Paulo, SP, Brazil
| | - J M S Bento
- Departamento de Entomologia e Acarologia, Escola Superior de Agricultura 'Luiz de Queiroz' Universidade de São Paulo (ESALQ-USP), Av. Pádua Dias, 11, 13418-900 Piracicaba, SP, Brazil
| | - J A M Rezende
- Departamento de Fitopatologia e Nematologia, Escola Superior de Agricultura 'Luiz de Queiroz' Universidade de São Paulo (ESALQ-USP), Av. Pádua Dias, 11, 13418-900 Piracicaba, SP, Brazil
| | - M F G V Peñaflor
- Departamento de Entomologia, Universidade Federal de Lavras (UFLA), Campus Universitário, 37200-00 Lavras, MG, Brazil
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Fiallo‐Olivé E, Navas‐Castillo J. Tomato chlorosis virus, an emergent plant virus still expanding its geographical and host ranges. MOLECULAR PLANT PATHOLOGY 2019; 20:1307-1320. [PMID: 31267719 PMCID: PMC6715620 DOI: 10.1111/mpp.12847] [Citation(s) in RCA: 47] [Impact Index Per Article: 9.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/19/2023]
Abstract
UNLABELLED Tomato chlorosis virus (ToCV) causes an important disease that primarily affects tomato, although it has been found infecting other economically important vegetable crops and a wide range of wild plants. First described in Florida (USA) and associated with a 'yellow leaf disorder' in the mid-1990s, ToCV has been found in 35 countries and territories to date, constituting a paradigmatic example of an emergent plant pathogen. ToCV is transmitted semipersistently by whiteflies (Hemiptera: Aleyrodidae) belonging to the genera Bemisia and Trialeurodes. Whitefly transmission is highly efficient and cases of 100% infection are frequently observed in the field. To date, no resistant or tolerant tomato plants are commercially available and the control of the disease relies primarily on the control of the insect vector. TAXONOMY Tomato chlorosis virus is one of the 14 accepted species in the genus Crinivirus, one of the four genera in the family Closteroviridae of plant viruses. VIRION AND GENOME PROPERTIES The genome of ToCV is composed of two molecules of single-stranded positive-sense RNA, named RNA1 and RNA2, separately encapsidated in long, flexuous, rod-like virions. As has been shown for other closterovirids, ToCV virions are believed to have a bipolar structure. RNA1 contains four open reading frames (ORFs) encoding proteins associated with virus replication and suppression of gene silencing, whereas RNA2 contains nine ORFs encoding proteins putatively involved in encapsidation, cell-to-cell movement, gene silencing suppression and whitefly transmission. HOST RANGE In addition to tomato, ToCV has been found to infect 84 dicot plant species belonging to 25 botanical families, including economically important crops. TRANSMISSION Like all species within the genus Crinivirus, ToCV is semipersistently transmitted by whiteflies, being one of only two criniviruses transmitted by members of the genera Bemisia and Trialeurodes. DISEASE SYMPTOMS Tomato 'yellow leaf disorder' syndrome includes interveinal yellowing and thickening of leaves. Symptoms first develop on lower leaves and then advance towards the upper part of the plant. Bronzing and necrosis of the older leaves are accompanied by a decline in vigour and reduction in fruit yield. In other hosts the most common symptoms include interveinal chlorosis and mild yellowing on older leaves. CONTROL Control of the disease caused by ToCV is based on the use of healthy seedlings for transplanting, limiting accessibility of alternate host plants that can serve as virus reservoirs and the spraying of insecticides for vector control. Although several wild tomato species have been shown to contain genotypes resistant to ToCV, there are no commercially available resistant or tolerant tomato varieties to date.
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Affiliation(s)
- Elvira Fiallo‐Olivé
- Instituto de Hortofruticultura Subtropical y Mediterránea “La Mayora”, Consejo Superior de Investigaciones Científicas – Universidad de Málaga (IHSM‐CSIC‐UMA)Avenida Dr. Wienberg s/n29750Algarrobo‐Costa, MálagaSpain
| | - Jesús Navas‐Castillo
- Instituto de Hortofruticultura Subtropical y Mediterránea “La Mayora”, Consejo Superior de Investigaciones Científicas – Universidad de Málaga (IHSM‐CSIC‐UMA)Avenida Dr. Wienberg s/n29750Algarrobo‐Costa, MálagaSpain
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Moodley V, Gubba A, Mafongoya PL. Prevalence, epidemiology and molecular studies of Tomato chlorosis virus (ToCV) in South Africa. PLoS One 2019; 14:e0220298. [PMID: 31339934 PMCID: PMC6655748 DOI: 10.1371/journal.pone.0220298] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2019] [Accepted: 07/12/2019] [Indexed: 11/19/2022] Open
Abstract
Criniviruses accumulate in the phloem tissue and damage crops by reducing chlorophyll which is essential for plant growth and development. Tomato chlorosis crinivirus (ToCV) is vectored by several whitefly species that damage tomato crops throughout the world. In South Africa, ToCV is a poorly studied pathogen of global economic importance. Therefore, a national survey was initiated to investigate the occurrence and distribution of criniviruses infecting tomato crops in South Africa. Whitefly infested tomato crops exhibiting interveinal leaf chlorosis and chlorotic flecking symptoms were assayed for crinivirus infections using a multiplex reverse transcription polymerase reaction (RT-PCR) approach to assess for the presence of crinivirus species that are known to infect solanaceous hosts. Next-generation sequencing (NGS) was used to generate the complete genome of ToCV from South Africa. Results from the survey indicated that ToCV is presently the only crinivirus species infecting tomatoes in South Africa. Blast analysis showed that the RNA-1 segment of ToCV from South Africa (ToCR1-186) matched 99% to Spanish isolates. On the other hand, the RNA-2 (ToCR2-186) segment matched 98% to a South Korean isolate and three Spanish isolates. Although recombination events were not detected, phylogenetic studies showed inconsistencies in the grouping of RNA-1 and RNA-2 segments for some of the ToCV isolates analyzed in this study. Therefore, we suggest the possibility of intraspecific reassortment. This is the first comprehensive study and full genome sequence of ToCV from South Africa. The information generated from this study is intended to raise awareness of ToCV infections on tomato crops in South Africa.
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Affiliation(s)
- Vaneson Moodley
- Department of Plant Pathology, School of Agricultural, Earth and Environmental Sciences, University of KwaZulu-Natal, Scottsville, Pietermaritzburg, South Africa
| | - Augustine Gubba
- Department of Plant Pathology, School of Agricultural, Earth and Environmental Sciences, University of KwaZulu-Natal, Scottsville, Pietermaritzburg, South Africa
| | - Paramu L. Mafongoya
- Department of Rural Agronomy and Development, School of Agricultural, Earth and Environmental Sciences, University of KwaZulu-Natal, Scottsville, Pietermaritzburg, South Africa
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Xie D, Zhang J, Yang H, Liu Y, Hu D, Song B. First Anti-ToCV Activity Evaluation of Glucopyranoside Derivatives Containing a Dithioacetal Moiety through a Novel ToCVCP-Oriented Screening Method. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2019; 67:7243-7248. [PMID: 31026153 DOI: 10.1021/acs.jafc.9b01265] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
Tomato chlorosis virus (ToCV) is a newly reported plant virus that has rapidly spread to all parts of the world, resulting in a serious decline in tomato quality and yield due to the lack of effective control agents. In this study, the ToCV coat protein (ToCVCP) was expressed and purified in Escherichia coli, and a series of novel glucopyranoside derivatives containing a dithioacetal moiety was designed and synthesized. The binding affinity of these compounds to ToCVCP was determined using microscale thermophoresis. Results revealed that compounds 6b and 8a interacted with ToCVCP with Kd values of 0.12 and 0.21 μM, respectively. Quantitative reverse transcription polymerase chain reaction was used to evaluate the anti-ToCV activity of 6b and 8a in vivo, and both significantly reduced the expression level of ToCVCP gene in tomato compared with commercial antivirus agents. This study provides an efficient and convenient screening method for anti-ToCV agents and reliable support for the development of novel agrochemicals for ToCV.
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Affiliation(s)
- Dandan Xie
- State Key Laboratory Breeding Base of Green Pesticide and Agricultural Bioengineering, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education , Guizhou University , Huaxi District, Guiyang 550025 , China
| | - Jian Zhang
- State Key Laboratory Breeding Base of Green Pesticide and Agricultural Bioengineering, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education , Guizhou University , Huaxi District, Guiyang 550025 , China
| | - Huanyu Yang
- State Key Laboratory Breeding Base of Green Pesticide and Agricultural Bioengineering, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education , Guizhou University , Huaxi District, Guiyang 550025 , China
| | - Yuewen Liu
- State Key Laboratory Breeding Base of Green Pesticide and Agricultural Bioengineering, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education , Guizhou University , Huaxi District, Guiyang 550025 , China
| | - Deyu Hu
- State Key Laboratory Breeding Base of Green Pesticide and Agricultural Bioengineering, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education , Guizhou University , Huaxi District, Guiyang 550025 , China
| | - Baoan Song
- State Key Laboratory Breeding Base of Green Pesticide and Agricultural Bioengineering, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education , Guizhou University , Huaxi District, Guiyang 550025 , China
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Şahin-Çevik M, Sivri ED, Çevik B. Identification and Expression Analysis of Genes Induced in Response to Tomato chlorosis virus Infection in Tomato. THE PLANT PATHOLOGY JOURNAL 2019; 35:257-273. [PMID: 31244571 PMCID: PMC6586192 DOI: 10.5423/ppj.oa.12.2018.0287] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/12/2018] [Revised: 02/10/2019] [Accepted: 03/13/2019] [Indexed: 05/05/2023]
Abstract
Tomato (Solanum lycopersicum) is one of the most widely grown and economically important vegetable crops in the world. Tomato chlorosis virus (ToCV) is one of the recently emerged viruses of tomato distributed worldwide. ToCV-tomato interaction was investigated at the molecular level for determining changes in the expression of tomato genes in response to ToCV infection in this study. A cDNA library enriched with genes induced in response to ToCV infection were constructed and 240 cDNAs were sequenced from this library. The macroarray analysis of 108 cDNAs revealed that the expression of 92 non-redundant tomato genes was induced by 1.5-fold or greater in response to ToCV infection. The majority of ToCV-induced genes identified in this study were associated with a variety of cellular functions including transcription, defense and defense signaling, metabolism, energy, transport facilitation, protein synthesis and fate and cellular biogenesis. Twenty ToCV-induced genes from different functional groups were selected and induction of 19 of these genes in response to ToCV infection was validated by RT-qPCR assay. Finally, the expression of 6 selected genes was analyzed in different stages of ToCV infection from 0 to 45 dpi. While the expression of three of these genes was only induced by ToCV infection, others were induced both by ToCV infection and wounding. The result showed that ToCV induced the basic defense response and activated the defense signaling in tomato plants at different stages of the infection. Functions of these defense related genes and their potential roles in disease development and resistance to ToCV are also discussed.
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Affiliation(s)
- Mehtap Şahin-Çevik
- Isparta University of Applied Sciences, Faculty of Agricultural Sciences and Technologies, Department of Agricultural Biotechnology, 32260 Isparta,
Turkey
- Corresponding author: Phone) +902462118544, FAX) +902462114885, E-mail)
| | - Emine Doguş Sivri
- Isparta University of Applied Sciences, Faculty of Agricultural Sciences and Technologies, Department of Agricultural Biotechnology, 32260 Isparta,
Turkey
| | - Bayram Çevik
- Isparta University of Applied Sciences, Faculty of Agricultural Sciences and Technologies, Department of Plant Protection, 32260 Isparta,
Turkey
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Fariña AE, Rezende JAM, Wintermantel WM. Expanding Knowledge of the Host Range of Tomato chlorosis virus and Host Plant Preference of Bemisia tabaci MEAM1. PLANT DISEASE 2019; 103:1132-1137. [PMID: 30995419 DOI: 10.1094/pdis-11-18-1941-re] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
The crinivirus Tomato chlorosis virus (ToCV) is often found infecting tomato crops in Brazil, with variable incidence, but associated with prevalence of its primary vector, Bemisia tabaci MEAM1. ToCV control is difficult because there are no resistant commercial tomato varieties or hybrids available and chemical spray for control of the whitefly vector has not been effective. The present study evaluated the partial host range of a Brazilian isolate of ToCV and the preference of B. tabaci MEAM1 for oviposition on those species identified as susceptible to the virus. Subsequently, transmission tests were performed using plants of each ToCV host species as sources of inoculum to elucidate the epidemiological importance of nontomato sources of inoculum for infection of tomato. Among 80 species experimentally inoculated, 25 were susceptible, including 6 previously not known to be hosts (Jaltomata procumbens, Physalis pruinosa, Solanum aculeatissimum, S. viarum, Beta vulgaris var. cicla, and Chenopodium quinoa). Preference of whitefly for oviposition and infection by ToCV under free-choice transmission tests varied among the susceptible species. When ToCV-infected tomato, eggplant, and C. quinoa were used separately as sources of inoculum for virus transmission to tomato plants, mean percentages of infected plants were 76.6, 3, and 0%, respectively. Average oviposition of Bemisia tabaci on these three hosts were 2.7, 10.6, and 0.0 eggs/cm2, respectively. Additional studies will be necessary to evaluate the importance of ToCV host plants under field conditions and their efficiency as sources of inoculum for virus acquisition and transmission to tomato crops.
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Affiliation(s)
- Arnaldo E Fariña
- 1 Departamento de Fitopatologia e Nematologia, Universidade de São Paulo, 13418-900 Piracicaba, São Paulo, Brazil; and
| | - Jorge A M Rezende
- 1 Departamento de Fitopatologia e Nematologia, Universidade de São Paulo, 13418-900 Piracicaba, São Paulo, Brazil; and
| | - William M Wintermantel
- 2 United States Department of Agriculture-Agricultural Research Service, Salinas, CA, U.S.A
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Ding TB, Li J, Chen EH, Niu JZ, Chu D. Transcriptome Profiling of the Whitefly Bemisia tabaci MED in Response to Single Infection of Tomato yellow leaf curl virus, Tomato chlorosis virus, and Their Co-infection. Front Physiol 2019; 10:302. [PMID: 31001125 PMCID: PMC6457337 DOI: 10.3389/fphys.2019.00302] [Citation(s) in RCA: 20] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/19/2018] [Accepted: 03/07/2019] [Indexed: 12/31/2022] Open
Abstract
Tomato yellow leaf curl virus (TYLCV) and Tomato chlorosis virus (ToCV) are two of the most devastating cultivated tomato viruses, causing significant crop losses worldwide. As the vector of both TYLCV and ToCV, the whitefly Bemisia tabaci Mediterranean (MED) is mainly responsible for the rapid spread and mixed infection of TYLCV and ToCV in China. However, little is known concerning B. tabaci MED's molecular response to TYLCV and ToCV infection or their co-infection. We determined the transcriptional responses of the whitefly MED to TYLCV infection, ToCV infection, and TYLCV&ToCV co-infection using Illumina sequencing. In all, 78, 221, and 60 differentially expressed genes (DEGs) were identified in TYLCV-infected, ToCV-infected, and TYLCV&ToCV co-infected whiteflies, respectively, compared with non-viruliferous whiteflies. Differentially regulated genes were sorted according to their roles in detoxification, stress response, immune response, transport, primary metabolism, cell function, and total fitness in whiteflies after feeding on virus-infected tomato plants. Alterations in the transcription profiles of genes involved in transport and energy metabolism occurred between TYLCV&ToCV co-infection and single infection with TYLCV or ToCV; this may be associated with the adaptation of the insect vector upon co-infection of the two viruses. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses demonstrated that the single infection with TYLCV or ToCV and the TYLCV&ToCV co-infection could perturb metabolic processes and metabolic pathways. Taken together, our results provide basis for further exploration of the molecular mechanisms of the response to TYLCV, ToCV single infection, and TYLCV&ToCV co-infection in B. tabaci MED, which will add to our knowledge of the interactions between plant viruses and insect vectors.
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Affiliation(s)
- Tian-Bo Ding
- Key Laboratory of Integrated Crop Pest Management of Shandong Province, College of Plant Health and Medicine, Qingdao Agricultural University, Qingdao, China
| | - Jie Li
- Key Laboratory of Integrated Crop Pest Management of Shandong Province, College of Plant Health and Medicine, Qingdao Agricultural University, Qingdao, China
| | - Er-Hu Chen
- Key Laboratory of Entomology and Pest Control Engineering, College of Plant Protection, Southwest University, Chongqing, China
| | - Jin-Zhi Niu
- Key Laboratory of Entomology and Pest Control Engineering, College of Plant Protection, Southwest University, Chongqing, China
| | - Dong Chu
- Key Laboratory of Integrated Crop Pest Management of Shandong Province, College of Plant Health and Medicine, Qingdao Agricultural University, Qingdao, China
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Mamoun Abdel-Salam AM, Rezk AA, Dawoud RA. Biochemical, Serological, Molecular and Natural Host Studies on Tomato Chlorosis Virus in Egypt. Pak J Biol Sci 2019; 22:83-94. [PMID: 30972990 DOI: 10.3923/pjbs.2019.83.94] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
BACKGROUND AND OBJECTIVE Tomato Chlorosis Virus (ToCV) is a white fly-transmitted and phloem-limited crinivirus reported in this study for the first time in Egypt. ToCV caused drastic reduction in tomato yield since 2013. The aim of this study is to characterize the virus incidence using biological, serological and molecular tools. MATERIAL AND METHODS The B. tabaci MEAM1 white fly was used for virus isolation and propagation. Identity of ToCV , its natural hosts were confirmed with RT-PCR using a specific primer pair for ToCV-heat shock protein 70 homologue (HSP70h) gene, sequencing and phylogenetic studies. ToCV was purified using the innovative electro-elution technique. The induced antiserum for the Egyptian isolate of the virus (ToCV-Giza) was used for DAS-ELISA and dot blotting immuno-assays to evaluate the virus presence in tomato and other natural hosts. RESULTS The ToCV-Giza isolate was donated an accession number "MH667315.1" from the GenBank. Blastx sequence analysis of the HSP70h gene indicated 97-99% of amino acid similarities with many tested ToCV isolates. Phylogenetic studies showed the clustering of all ToCV isolates including ToCV-Giza in a separate group from the other tested criniviruses. The virus had a UV spectrum of a nucleoprotein with Amax and Amin at 260 and 240 nm, respectively and A260/280 ratio of 1.33. Out of 52 different tested plant species within 22 families, 44 were positive hosts for ToCV. Thirty seven out of these 44 plant species were considered as new hosts for ToCV in the present study. These included Ammi majus and Coriandrum sativum (Apiaceae), cabbage (Brassicaceae), sweet potato (Convolvulaceae), melon, cucumber, luffa (Cucurbitaceae), soybean, cowpea, faba bean (Fabaceae), Egyptian and American Cotton (Malvaceae). Several ornamentals either herbal type or woody trees belonging to Acanthaceae, Amaranthaceae, Euophorbiaceae, Moraceae and Rubiaceae were also recognized for the first time as hosts for ToCV. CONCLUSION The obtained results confirmed the wide distribution of ToCV in its natural hosts in Egypt. Hygienic measures including control of the virus vector and removing of natural hosts should be strictly implicated.
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Çevik B, Kıvrak H, Şahin-Çevik M. Development of a graft inoculation method and a real-time RT-PCR assay for monitoring Tomato chlorosis virus infection in tomato. J Virol Methods 2018; 265:1-8. [PMID: 30557574 DOI: 10.1016/j.jviromet.2018.12.004] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2018] [Revised: 12/13/2018] [Accepted: 12/14/2018] [Indexed: 01/10/2023]
Abstract
A graft inoculation method coupled with RT-qPCR was developed for monitoring ToCV infection in tomato plants. Ten seed-grown tomato seedlings were graft inoculated with phloem tissue-containing stem segments from a ToCV-infected tomato plants. Another group of tomato seedling were grafted with similar stem segments from a healthy tomato plant as mock inoculated control. The CP gene of ToCV was cloned under the control of T7 promoter and in vitro synthesized RNA was used as a standard for quantification. Total RNA was isolated from leaf samples of ToCV-inoculated and mock-inoculated control plants before the inoculation and 1-60 days post inoculation (dpi). The presence and the titer of ToCV were determined from all ToCV-inoculated or mock-inoculated control plants by RT-qPCR. After 15 dpi, ToCV was detected in 20-30% of graft-inoculated plants. The infection rate then increased progressively and reached to 70-80% by 60 dpi. Titer of ToCV was at the detectable level at 15 dpi and increased and reached to maximum level by 40 dpi and then started to decrease. The results showed that patch grafting is a simple and efficient method for experimental inoculation of ToCV and can be used as an alternative and/or complementary to vector transmission in the laboratories. The patch grafting could be combined with RT-qPCR and used for infecting and quantitative monitoring of ToCV or other phloem-limited viruses in tomato or in other plants.
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Affiliation(s)
- Bayram Çevik
- Applied Sciences University of Isparta, Faculty of Agricultural Sciences and Technologies, Department of Plant Protection, 32260, Isparta, Turkey.
| | - Hatice Kıvrak
- Applied Sciences University of Isparta, Faculty of Agricultural Sciences and Technologies, Department of Agricultural Biotechnology, 32260, Isparta, Turkey
| | - Mehtap Şahin-Çevik
- Applied Sciences University of Isparta, Faculty of Agricultural Sciences and Technologies, Department of Agricultural Biotechnology, 32260, Isparta, Turkey
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Lee YJ, Kil EJ, Kwak HR, Kim M, Seo JK, Lee S, Choi HS. Phylogenetic Characterization of Tomato chlorosis virus Population in Korea: Evidence of Reassortment between Isolates from Different Origins. THE PLANT PATHOLOGY JOURNAL 2018; 34:199-207. [PMID: 29887776 PMCID: PMC5985646 DOI: 10.5423/ppj.oa.10.2017.0220] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/24/2017] [Revised: 01/22/2018] [Accepted: 02/16/2018] [Indexed: 05/29/2023]
Abstract
Tomato chlorosis virus (ToCV) is a whitefly-transmitted and phloem-limited crinivirus. In 2013, severe interveinal chlorosis and bronzing on tomato leaves, known symptoms of ToCV infection, were observed in greenhouses in Korea. To identify ToCV infection in symptomatic tomato plants, RT-PCR with ToCV-specific primers was performed on leaf samples collected from 11 tomato cultivating areas where ToCV-like symptoms were observed in 2013 and 2014. About half of samples (45.18%) were confirmed as ToCV-infected, and the complete genome of 10 different isolates were characterized. This is the first report of ToCV occurring in Korea. The phylogenetic relationship and genetic variation among ToCV isolates from Korea and other countries were also analysed. When RNA1 and RNA2 are analysed separately, ToCV isolates were clustered into three groups in phylogenetic trees, and ToCV Korean isolates were confirmed to belong to two groups, which were geographically separated. These results suggested that Korean ToCV isolates originated from two independent origins. However, the RNA1 and RNA2 sequences of the Yeonggwang isolate were confirmed to belong to different groups, which indicated that ToCV RNA1 and RNA2 originated from two different origins and were reassorted in Yeonggwang, which is the intermediate point of two geographically separated groups.
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Affiliation(s)
- Ye-Ji Lee
- Department of Genetic Engineering, Sungkyunkwan University, Suwon 16419,
Korea
- Dapartment of Seed Services, Foundation of Agricultural Technology Commercialization and Transfer, Iksan 54667,
Korea
- Crop Protection Division, National Academy of Agricultural Science, Rural Development Administration, Wanju 55365,
Korea
| | - Eui-Joon Kil
- Department of Genetic Engineering, Sungkyunkwan University, Suwon 16419,
Korea
| | - Hae-Ryun Kwak
- Crop Protection Division, National Academy of Agricultural Science, Rural Development Administration, Wanju 55365,
Korea
| | - Mikyeong Kim
- Crop Protection Division, National Academy of Agricultural Science, Rural Development Administration, Wanju 55365,
Korea
| | - Jang-Kyun Seo
- Crop Protection Division, National Academy of Agricultural Science, Rural Development Administration, Wanju 55365,
Korea
- Graduate School of International Agricultural Technology, Seoul National University, Pyeongchang 25354,
Korea
| | - Sukchan Lee
- Department of Genetic Engineering, Sungkyunkwan University, Suwon 16419,
Korea
| | - Hong-Soo Choi
- Crop Protection Division, National Academy of Agricultural Science, Rural Development Administration, Wanju 55365,
Korea
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Kang YC, Wang YC, Hsia CM, Tsai WS, Huang LH, Yeh SD, Chen TC. Molecular Characterization and Detection of a Genetically Distinct Tomato Chlorosis Virus Strain in Taiwan. PLANT DISEASE 2018; 102:600-607. [PMID: 30673497 DOI: 10.1094/pdis-05-17-0728-re] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
The whitefly-transmitted tomato chlorosis virus (ToCV) belonging to the genus Crinivirus (family Closteroviridae) affects tomato production worldwide. ToCV was first recorded in Taiwan in 1998 affecting tomato production. In this study, a local virus isolate XS was obtained, after serial whitefly transmissions from a diseased tomato plant displaying general chlorosis were collected in central Taiwan. The whole genome sequence of XS was determined from cDNA fragments amplified by reverse transcription (RT)-PCR, first using the degenerate primers for viruses of Closteroviridae and followed by degenerate and specific primers designed on available sequences of the ToCV isolates. The nucleotide (nt) sequences of RNA-1 and RNA-2 of the XS shared low identities of 77.8 to 78% and 78 to 78.1%, respectively, with genome segments of other ToCV isolates. Nevertheless, the viral RNA-dependent RNA polymerase (RdRp), heat shock protein 70 homolog (Hsp70h), and major capsid protein (CP) shared 88.3 to 96.2% amino acid (aa) identities with other ToCV isolates, indicating that XS is a new strain of this virus. Phylogenetic analyses of these three proteins indicated that all ToCV isolates from different counties outside Taiwan are closely related and clustered in the same clade, whereas the XS isolate is distinct and forms a unique branch. A one tube RT-PCR assay using primers designed from the genomic sequence of the XS was able to detect the ToCV-XS in infected tomato plants and in individual whiteflies. A field survey during 2013 to 2016 revealed a high ToCV-XS prevalence of 60.5% in 172 tested tomato samples, demonstrating that ToCV-XS is becoming an emerging threat for tomato production in Taiwan.
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Affiliation(s)
- Ya-Chi Kang
- Department of Plant Pathology, National Chung Hsing University, Taichung 40227, Taiwan
| | - Yun-Chi Wang
- Department of Biotechnology, Asia University, Wufeng, Taichung 41354, Taiwan
| | - Chun-Ming Hsia
- Department of Biotechnology, Asia University, Wufeng, Taichung 41354, Taiwan
| | - Wen-Shi Tsai
- Department of Plant Medicine, National Chiayi University, Chiayi 60004, Taiwan
| | - Li-Hsin Huang
- Taiwan Agricultural Chemicals and Toxic Substances Research Institute, Wufeng, Taichung 41358, Taiwan
| | - Shyi-Dong Yeh
- Department of Plant Pathology, National Chung Hsing University, Taichung 40227, Taiwan
| | - Tsung-Chi Chen
- Department of Biotechnology, Asia University, Wufeng, Taichung 41354, Taiwan, and Department of Medical Research, China Medical University Hospital, China Medical University, Taichung 40402, Taiwan
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Wainaina JM, De Barro P, Kubatko L, Kehoe MA, Harvey J, Karanja D, Boykin LM. Global phylogenetic relationships, population structure and gene flow estimation of Trialeurodes vaporariorum (Greenhouse whitefly). BULLETIN OF ENTOMOLOGICAL RESEARCH 2018; 108:5-13. [PMID: 28532532 DOI: 10.1017/s0007485317000360] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
Trialeurodes vaporariorum (Westwood, 1856) (Greenhouse whitefly) is an agricultural pest of global importance. It is associated with damage to plants during feeding and subsequent virus transmission. Yet, global phylogenetic relationships, population structure, and estimation of the rates of gene flow within this whitefly species remain largely unexplored. In this study, we obtained and filtered 227 GenBank records of mitochondrial cytochrome c oxidase I (mtCOI) sequences of T. vaporariorum, across various global locations to obtain a final set of 217 GenBank records. We further amplified and sequenced a ~750 bp fragment of mtCOI from an additional 31 samples collected from Kenya in 2014. Based on a total of 248 mtCOI sequences, we identified 16 haplotypes, with extensive overlap across all countries. Population structure analysis did not suggest population differentiation. Phylogenetic analysis indicated the 2014 Kenyan collection of samples clustered with a single sequence from the Netherlands to form a well-supported clade (denoted clade 1a) nested within the total set of sequences (denoted clade 1). Pairwise distances between sequences show greater sequence divergence between clades than within clades. In addition, analysis using migrate-n gave evidence for recent gene flow between the two groups. Overall, we find that T. vaporariorum forms a single large group, with evidence of further diversification consisting primarily of Kenyan sequences and one sequence from the Netherlands forming a well-supported clade.
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Affiliation(s)
- J M Wainaina
- The University of Western Australia,Australian Research Council Centre of Excellence in Plant Energy Biology and School of Molecular Sciences,Crawley,Perth 6009,Western Australia,Australia
| | - P De Barro
- CSIRO,GPO Box 2583,Brisbane QLD 4001,Australia
| | - L Kubatko
- The Ohio State University 12th Avenue Columbus,Ohio,USA
| | - M A Kehoe
- Departments of Agriculture and Food Western Australia,South Perth WA 6151,Australia
| | - J Harvey
- Feed the Future Innovation Lab for the Reduction of Post-Harvest Loss,Kansas State University,Manhattan,Kansas,USA
| | - D Karanja
- Kenya Agriculture and Livestock Research Organization (KARLO) Box 340-90100,Machakos,Kenya
| | - L M Boykin
- The University of Western Australia,Australian Research Council Centre of Excellence in Plant Energy Biology and School of Molecular Sciences,Crawley,Perth 6009,Western Australia,Australia
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Shi X, Tang X, Zhang X, Zhang D, Li F, Yan F, Zhang Y, Zhou X, Liu Y. Transmission Efficiency, Preference and Behavior of Bemisia tabaci MEAM1 and MED under the Influence of Tomato Chlorosis Virus. FRONTIERS IN PLANT SCIENCE 2018; 8:2271. [PMID: 29387077 PMCID: PMC5776130 DOI: 10.3389/fpls.2017.02271] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/16/2017] [Accepted: 12/27/2017] [Indexed: 05/26/2023]
Abstract
Tomato chlorosis virus (ToCV, genus Crinivirus, family Closteroviridae) is an economically important virus in more than 20 countries. In China, ToCV was first detected in 2013 and has already spread throughout the country. ToCV is transmitted in a semi-persistent manner by the whitefly, Bemisia tabaci, but not seed. In the past two decades, the most invasive MEAM1 and MED have replaced the indigenous B. tabaci in China, and currently MED is the most dominant cryptic species. To better understand the prevalence of ToCV with their vectors, we tested the hypothesis that the rapid spread of ToCV in China is closely related to the dominance of MED. ToCV acquisition and accumulation rate following transmission was significantly higher by MED than MEAM1. In addition, ToCV persisted for more than 4 days in MED but only 2 days in MEAM1. Viruliferous MED preferred non-infected over virus-infected plants, although MED performed better on infected than on non-infected plants. Our combined results support the initial hypothesis that the rapid spread of ToCV is associated with the spread of B. tabaci MED in China.
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Affiliation(s)
- Xiaobin Shi
- Key Laboratory of Pest Management of Horticultural Crop of Hunan Province, Hunan Plant Protection Institute, Hunan Academy of Agricultural Science, Changsha, China
| | - Xin Tang
- College of Plant Protection, Hunan Agricultural University, Changsha, China
| | - Xing Zhang
- College of Life Sciences, University of Chinese Academy of Sciences, Beijing, China
| | - Deyong Zhang
- Key Laboratory of Pest Management of Horticultural Crop of Hunan Province, Hunan Plant Protection Institute, Hunan Academy of Agricultural Science, Changsha, China
| | - Fan Li
- College of Plant Protection, Yunnan Agricultural University, Kunming, China
| | - Fei Yan
- Institute of Virus and Biotechnology, Zhejiang Academy of Agricultural Sciences, Hangzhou, China
| | - Youjun Zhang
- Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Xuguo Zhou
- Department of Entomology, University of Kentucky, Lexington, KY, United States
| | - Yong Liu
- Key Laboratory of Pest Management of Horticultural Crop of Hunan Province, Hunan Plant Protection Institute, Hunan Academy of Agricultural Science, Changsha, China
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Landeo-Ríos Y, Navas-Castillo J, Moriones E, Cañizares MC. The Heterologous Expression of the p22 RNA Silencing Suppressor of the Crinivirus Tomato Chlorosis Virus from Tobacco Rattle Virus and Potato Virus X Enhances Disease Severity but Does Not Complement Suppressor-Defective Mutant Viruses. Viruses 2017; 9:E358. [PMID: 29186781 PMCID: PMC5744133 DOI: 10.3390/v9120358] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/19/2017] [Revised: 11/09/2017] [Accepted: 11/22/2017] [Indexed: 11/17/2022] Open
Abstract
To counteract host antiviral RNA silencing, plant viruses express suppressor proteins that function as pathogenicity enhancers. The genome of the Tomato chlorosis virus (ToCV) (genus Crinivirus, family Closteroviridae) encodes an RNA silencing suppressor, the protein p22, that has been described as having one of the longest lasting local suppressor activities when assayed in Nicotiana benthamiana. Since suppression of RNA silencing and the ability to enhance disease severity are closely associated, we analyzed the effect of expressing p22 in heterologous viral contexts. Thus, we studied the effect of the expression of ToCV p22 from viral vectors Tobacco rattle virus (TRV) and Potato virus X (PVX), and from attenuated suppressor mutants in N. benthamiana plants. Our results show that although an exacerbation of disease symptoms leading to plant death was observed in the heterologous expression of ToCV p22 from both viruses, only in the case of TRV did increased viral accumulation occur. The heterologous expression of ToCV p22 could not complement suppressor-defective mutant viruses.
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Affiliation(s)
| | | | | | - M. Carmen Cañizares
- Instituto de Hortofruticultura Subtropical y Mediterránea “La Mayora”—Universidad de Málaga—Consejo Superior de Investigaciones Científicas (IHSM-UMA-CSIC), Estación Experimental “La Mayora”, Algarrobo-Costa, 29750 Málaga, Spain; (Y.L.-R.); (J.N.-C.); (E.M.)
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Hasegawa DK, Chen W, Zheng Y, Kaur N, Wintermantel WM, Simmons AM, Fei Z, Ling KS. Comparative transcriptome analysis reveals networks of genes activated in the whitefly, Bemisia tabaci when fed on tomato plants infected with Tomato yellow leaf curl virus. Virology 2017; 513:52-64. [PMID: 29035786 DOI: 10.1016/j.virol.2017.10.008] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/04/2017] [Revised: 10/03/2017] [Accepted: 10/07/2017] [Indexed: 02/05/2023]
Abstract
The whitefly Bemisia tabaci can transmit hundreds of viruses to numerous agricultural crops in the world. Five genera of viruses, including Begomovirus and Crinivirus, are transmitted by B. tabaci. There is little knowledge about the genes involved in virus acquisition and transmission by whiteflies. Using a comparative transcriptomics approach, we evaluated the gene expression profiles of whiteflies (B. tabaci MEAM1) after feeding on tomato infected by a begomovirus, Tomato yellow leaf curl virus (TYLCV), in comparison to a recent study, in which whiteflies were fed on tomato infected by the crinivirus, Tomato chlorosis virus (ToCV). The data revealed similar temporal trends in gene expression, but large differences in the number of whitefly genes when fed on TYLCV or ToCV-infected tomato. Transcription factors, cathepsins, receptors, and a hemocyanin gene, which is implicated in mediating antiviral immune responses in other insects and possibly virus transmission, were some of the genes identified.
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Affiliation(s)
- Daniel K Hasegawa
- USDA-ARS, US Vegetable Laboratory, Charleston, South Carolina, USA; Boyce Thompson Institute, Ithaca, New York, USA.
| | - Wenbo Chen
- Boyce Thompson Institute, Ithaca, New York, USA.
| | - Yi Zheng
- Boyce Thompson Institute, Ithaca, New York, USA.
| | - Navneet Kaur
- USDA-ARS, Crop Improvement and Protection Research, Salinas, California, USA.
| | | | - Alvin M Simmons
- USDA-ARS, US Vegetable Laboratory, Charleston, South Carolina, USA.
| | - Zhangjun Fei
- Boyce Thompson Institute, Ithaca, New York, USA; USDA-ARS, Robert W. Holley Center for Agriculture and Health, Ithaca, New York, USA.
| | - Kai-Shu Ling
- USDA-ARS, US Vegetable Laboratory, Charleston, South Carolina, USA.
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Qiao W, Medina V, Falk BW. Inspirations on Virus Replication and Cell-to-Cell Movement from Studies Examining the Cytopathology Induced by Lettuce infectious yellows virus in Plant Cells. FRONTIERS IN PLANT SCIENCE 2017; 8:1672. [PMID: 29021801 PMCID: PMC5623981 DOI: 10.3389/fpls.2017.01672] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/04/2017] [Accepted: 09/12/2017] [Indexed: 05/06/2023]
Abstract
Lettuce infectious yellows virus (LIYV) is the type member of the genus Crinivirus in the family Closteroviridae. Like many other positive-strand RNA viruses, LIYV infections induce a number of cytopathic changes in plant cells, of which the two most characteristic are: Beet yellows virus-type inclusion bodies composed of vesicles derived from cytoplasmic membranes; and conical plasmalemma deposits (PLDs) located at the plasmalemma over plasmodesmata pit fields. The former are not only found in various closterovirus infections, but similar structures are known as 'viral factories' or viroplasms in cells infected with diverse types of animal and plant viruses. These are generally sites of virus replication, virion assembly and in some cases are involved in cell-to-cell transport. By contrast, PLDs induced by the LIYV-encoded P26 non-virion protein are not involved in replication but are speculated to have roles in virus intercellular movement. These deposits often harbor LIYV virions arranged to be perpendicular to the plasma membrane over plasmodesmata, and our recent studies show that P26 is required for LIYV systemic plant infection. The functional mechanism of how LIYV P26 facilitates intercellular movement remains unclear, however, research on other plant viruses provides some insights on the possible ways of viral intercellular movement through targeting and modifying plasmodesmata via interactions between plant cellular components and viral-encoded factors. In summary, beginning with LIYV, we review the studies that have uncovered the biological determinants giving rise to these cytopathological effects and their importance in viral replication, virion assembly and intercellular movement during the plant infection by closteroviruses, and compare these findings with those for other positive-strand RNA viruses.
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Affiliation(s)
- Wenjie Qiao
- Department of Plant Pathology, University of California, Davis, Davis, CA, United States
| | - Vicente Medina
- Department of Crop and Forest Sciences, University of Lleida, Lleida, Spain
| | - Bryce W. Falk
- Department of Plant Pathology, University of California, Davis, Davis, CA, United States
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Tang X, Shi X, Zhang D, Li F, Yan F, Zhang Y, Liu Y, Zhou X. Detection and epidemic dynamic of ToCV and CCYV with Bemisia tabaci and weed in Hainan of China. Virol J 2017; 14:169. [PMID: 28870255 PMCID: PMC5584531 DOI: 10.1186/s12985-017-0833-2] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/27/2017] [Accepted: 08/21/2017] [Indexed: 01/18/2023] Open
Abstract
BACKGROUND In recent years, two of the crinivirus, Tomato chlorosis virus (ToCV) and Cucurbit chlorotic yellows virus (CCYV) have gained increasing attention due to their rapid spread and devastating impacts on vegetable production worldwide. Both of these viruses are transmitted by the sweet potato whitefly, Bemisia tabaci (Gennadius), in a semi-persistent manner. Up to now, there is still lack of report in Hainan, the south of China. METHODS We used observational and experimental methods to explore the prevalence and incidence dynamic of CCYV and ToCV transmitted by whiteflies in Hainan of China. RESULTS In 2016, the chlorosis symptom was observed in the tomato and cucumber plants with a large number of B. tabaci on the infected leaves in Hainan, China, with the incidence rate of 69.8% and 62.6% on tomato and cucumber, respectively. Based on molecular identification, Q biotype was determined with a viruliferous rate of 65.0% and 55.0% on the tomato and cucumber plants, respectively. The weed, Alternanthera philoxeroides near the tomato and cucumber was co-infected by the two viruses. Furthermore, incidence dynamic of ToCV and CCYV showed a close relationship with the weed, Alternanthera philoxeroides, which is widely distributed in Hainan. CONCLUSION Our results firstly reveal that the weed, A. philoxeroides is infected by both ToCV and CCYV. Besides, whiteflies showed a high viruliferous rate of ToCV and CCYV. Hainan is an extremely important vegetable production and seed breeding center in China. If the whitefly can carry these two viruses concurrently, co-infection in their mutual host plants can lead to devastating losses in the near future.
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Affiliation(s)
- Xin Tang
- College of Plant Protection, Hunan Agricultural University, Changsha, 410125 China
- Hunan Academy of Agricultural Science, Hunan Plant Protection Institute, Key Laboratory of Pest Management of Horticultural Crop of Hunan Province, No. 726, Yuanda Road, Furong District, Hunan province, Changsha, 410125 China
| | - Xiaobin Shi
- Hunan Academy of Agricultural Science, Hunan Plant Protection Institute, Key Laboratory of Pest Management of Horticultural Crop of Hunan Province, No. 726, Yuanda Road, Furong District, Hunan province, Changsha, 410125 China
| | - Deyong Zhang
- Hunan Academy of Agricultural Science, Hunan Plant Protection Institute, Key Laboratory of Pest Management of Horticultural Crop of Hunan Province, No. 726, Yuanda Road, Furong District, Hunan province, Changsha, 410125 China
| | - Fan Li
- College of Plant Protection, Yunnan Agricultural University, Yunnan, 650201 China
| | - Fei Yan
- Institute of virus and biotechnology, Zhejiang Academy of Agricultural Sciences, Hangzhou, 310021 China
| | - Youjun Zhang
- Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Beijing, 100081 China
| | - Yong Liu
- Hunan Academy of Agricultural Science, Hunan Plant Protection Institute, Key Laboratory of Pest Management of Horticultural Crop of Hunan Province, No. 726, Yuanda Road, Furong District, Hunan province, Changsha, 410125 China
| | - Xuguo Zhou
- College of Plant Protection, Hunan Agricultural University, Changsha, 410125 China
- Department of Entomology, University of Kentucky, S-225 Agricultural Science Center North Lexington, Lexington, KY 40546-0091 USA
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Prado Maluta NK, Garzo E, Moreno A, Navas-Castillo J, Fiallo-Olivé E, Spotti Lopes JR, Fereres A. Stylet penetration activities of the whitefly Bemisia tabaci associated with inoculation of the crinivirus Tomato chlorosis virus. J Gen Virol 2017; 98:1515-1520. [DOI: 10.1099/jgv.0.000783] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023] Open
Affiliation(s)
- Nathalie Kristine Prado Maluta
- Instituto de Ciencias Agrarias (ICACSIC), Serrano 115 dpdo, 28006 Madrid, Spain
- Depto de Entomologia e Acarologia, ESALQ, Universidade de São Paulo, CP. 9, 13418-900, Piracicaba, SP, Brazil
| | - Elisa Garzo
- Instituto de Ciencias Agrarias (ICACSIC), Serrano 115 dpdo, 28006 Madrid, Spain
| | - Aranzazu Moreno
- Instituto de Ciencias Agrarias (ICACSIC), Serrano 115 dpdo, 28006 Madrid, Spain
| | - Jesús Navas-Castillo
- Instituto de Hortofruticultura Subtropical y Mediterránea ‘La Mayora’, Universidad de Málaga - Consejo Superior de Investigaciones Científicas (IHSM-UMA-CSIC), Estación Experimental ‘La Mayora’, 29750 Algarrobo-Costa, Málaga, Spain
| | - Elvira Fiallo-Olivé
- Instituto de Hortofruticultura Subtropical y Mediterránea ‘La Mayora’, Universidad de Málaga - Consejo Superior de Investigaciones Científicas (IHSM-UMA-CSIC), Estación Experimental ‘La Mayora’, 29750 Algarrobo-Costa, Málaga, Spain
| | - João Roberto Spotti Lopes
- Depto de Entomologia e Acarologia, ESALQ, Universidade de São Paulo, CP. 9, 13418-900, Piracicaba, SP, Brazil
| | - Alberto Fereres
- Instituto de Ciencias Agrarias (ICACSIC), Serrano 115 dpdo, 28006 Madrid, Spain
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Kaur N, Hasegawa DK, Ling KS, Wintermantel WM. Application of Genomics for Understanding Plant Virus-Insect Vector Interactions and Insect Vector Control. PHYTOPATHOLOGY 2016; 106:1213-1222. [PMID: 27442532 DOI: 10.1094/phyto-02-16-0111-fi] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
The relationships between plant viruses and their vectors have evolved over the millennia, and yet, studies on viruses began <150 years ago and investigations into the virus and vector interactions even more recently. The advent of next generation sequencing, including rapid genome and transcriptome analysis, methods for evaluation of small RNAs, and the related disciplines of proteomics and metabolomics offer a significant shift in the ability to elucidate molecular mechanisms involved in virus infection and transmission by insect vectors. Genomic technologies offer an unprecedented opportunity to examine the response of insect vectors to the presence of ingested viruses through gene expression changes and altered biochemical pathways. This review focuses on the interactions between viruses and their whitefly or thrips vectors and on potential applications of genomics-driven control of the insect vectors. Recent studies have evaluated gene expression in vectors during feeding on plants infected with begomoviruses, criniviruses, and tospoviruses, which exhibit very different types of virus-vector interactions. These studies demonstrate the advantages of genomics and the potential complementary studies that rapidly advance our understanding of the biology of virus transmission by insect vectors and offer additional opportunities to design novel genetic strategies to manage insect vectors and the viruses they transmit.
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Affiliation(s)
- Navneet Kaur
- First and fourth authors: USDA-ARS, Crop Improvement and Protection Research, Salinas, CA 93905; second author: USDA-ARS, U.S. Vegetable Laboratory, Charleston, SC 29414; Boyce Thompson Institute, Cornell University, Ithaca, NY 14853; and third author: USDA-ARS, U.S. Vegetable Laboratory, Charleston, SC 29414
| | - Daniel K Hasegawa
- First and fourth authors: USDA-ARS, Crop Improvement and Protection Research, Salinas, CA 93905; second author: USDA-ARS, U.S. Vegetable Laboratory, Charleston, SC 29414; Boyce Thompson Institute, Cornell University, Ithaca, NY 14853; and third author: USDA-ARS, U.S. Vegetable Laboratory, Charleston, SC 29414
| | - Kai-Shu Ling
- First and fourth authors: USDA-ARS, Crop Improvement and Protection Research, Salinas, CA 93905; second author: USDA-ARS, U.S. Vegetable Laboratory, Charleston, SC 29414; Boyce Thompson Institute, Cornell University, Ithaca, NY 14853; and third author: USDA-ARS, U.S. Vegetable Laboratory, Charleston, SC 29414
| | - William M Wintermantel
- First and fourth authors: USDA-ARS, Crop Improvement and Protection Research, Salinas, CA 93905; second author: USDA-ARS, U.S. Vegetable Laboratory, Charleston, SC 29414; Boyce Thompson Institute, Cornell University, Ithaca, NY 14853; and third author: USDA-ARS, U.S. Vegetable Laboratory, Charleston, SC 29414
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48
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Orfanidou CG, Pappi PG, Efthimiou KE, Katis NI, Maliogka VI. Transmission of Tomato chlorosis virus (ToCV) by Bemisia tabaci Biotype Q and Evaluation of Four Weed Species as Viral Sources. PLANT DISEASE 2016; 100:2043-2049. [PMID: 30682999 DOI: 10.1094/pdis-01-16-0054-re] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/13/2023]
Abstract
Tomato chlorosis virus (ToCV) is implicated in tomato yellows disease in many countries worldwide. It has a wide host range, including cultivated species as well as arable weeds, and it is transmitted in a semipersistent manner by at least five whitefly species or biotypes of the genera Trialeurodes and Bemisia. ToCV is not seed transmitted and more than 36 weed species have been recorded as natural reservoirs, acting as unique sources both for the virus and its vectors when susceptible crops are harvested. In this study, experiments were conducted to determine the transmission parameters of ToCV by biotype Q, the most abundant biotype of Bemisia tabaci in Greece. Results showed that biotype Q is an efficient vector of ToCV and it is able to retain the virus for at least 6 days. This vector was then used for the evaluation of four widespread weed species (Solanum nigrum, Sonchus oleraceus, Amaranthus retroflexus, and Chenopodium album) as ToCV sources through transmission experiments. Solanum nigrum was shown to be the most significant viral source among the tested weeds, followed by Sonchus oleraceus, A. retroflexus, and, lastly, C. album. Nevertheless, none of them was as efficient a ToCV source as tomato. This variation could be attributed to differences in virus concentration in each plant species or possible host preference by the whitefly vector.
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Affiliation(s)
- C G Orfanidou
- Lab of Plant Pathology, Faculty of Agriculture, Forestry and Natural Environment, School of Agriculture, Aristotle University of Thessaloniki, 54124, Thessaloniki, Greece
| | - P G Pappi
- Lab of Plant Pathology, Faculty of Agriculture, Forestry and Natural Environment, School of Agriculture, Aristotle University of Thessaloniki, 54124, Thessaloniki, Greece
| | - K E Efthimiou
- Lab of Plant Pathology, Faculty of Agriculture, Forestry and Natural Environment, School of Agriculture, Aristotle University of Thessaloniki, 54124, Thessaloniki, Greece
| | - N I Katis
- Lab of Plant Pathology, Faculty of Agriculture, Forestry and Natural Environment, School of Agriculture, Aristotle University of Thessaloniki, 54124, Thessaloniki, Greece
| | - V I Maliogka
- Lab of Plant Pathology, Faculty of Agriculture, Forestry and Natural Environment, School of Agriculture, Aristotle University of Thessaloniki, 54124, Thessaloniki, Greece
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Landeo-Ríos Y, Navas-Castillo J, Moriones E, Cañizares MC. The p22 RNA Silencing Suppressor of the Crinivirus Tomato chlorosis virus is Dispensable for Local Viral Replication but Important for Counteracting an Antiviral RDR6-Mediated Response during Systemic Infection. Viruses 2016; 8:E182. [PMID: 27367718 PMCID: PMC4974517 DOI: 10.3390/v8070182] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2016] [Revised: 06/15/2016] [Accepted: 06/23/2016] [Indexed: 01/01/2023] Open
Abstract
Among the components of the RNA silencing pathway in plants, RNA-dependent RNA polymerases (RDRs) play fundamental roles in antiviral defence. Here, we demonstrate that the Nicotiana benthamiana RDR6 is involved in defence against the bipartite crinivirus (genus Crinivirus, family Closteroviridae) Tomato chlorosis virus (ToCV). Additionally, by producing a p22-deficient ToCV infectious mutant clone (ToCVΔp22), we studied the role of this viral suppressor of RNA silencing in viral infection in both wild-type and RDR6-silenced N. benthamiana (NbRDR6i) plants. We demonstrate that p22 is dispensable for the replication of ToCV, where RDR6 appears not to have any effect. Furthermore, the finding that ToCV∆p22 systemic accumulation was impaired in wild-type N. benthamiana but not in NbRDR6i plants suggests a role for p22 in counteracting an RDR6-mediated antiviral response of the plant during systemic infection.
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Affiliation(s)
- Yazmín Landeo-Ríos
- Instituto de Hortofruticultura Subtropical y Mediterránea "La Mayora"-Universidad de Málaga-Consejo Superior de Investigaciones Científicas (IHSM-UMA-CSIC), Estación Experimental "La Mayora", 29750 Algarrobo-Costa, Málaga, Spain.
| | - Jesús Navas-Castillo
- Instituto de Hortofruticultura Subtropical y Mediterránea "La Mayora"-Universidad de Málaga-Consejo Superior de Investigaciones Científicas (IHSM-UMA-CSIC), Estación Experimental "La Mayora", 29750 Algarrobo-Costa, Málaga, Spain.
| | - Enrique Moriones
- Instituto de Hortofruticultura Subtropical y Mediterránea "La Mayora"-Universidad de Málaga-Consejo Superior de Investigaciones Científicas (IHSM-UMA-CSIC), Estación Experimental "La Mayora", 29750 Algarrobo-Costa, Málaga, Spain.
| | - M Carmen Cañizares
- Instituto de Hortofruticultura Subtropical y Mediterránea "La Mayora"-Universidad de Málaga-Consejo Superior de Investigaciones Científicas (IHSM-UMA-CSIC), Estación Experimental "La Mayora", 29750 Algarrobo-Costa, Málaga, Spain.
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50
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Gautam NK, Kumar K, Prasad M. Leaf crinkle disease in urdbean (Vigna mungo L. Hepper): An overview on causal agent, vector and host. PROTOPLASMA 2016; 253:729-746. [PMID: 26779639 DOI: 10.1007/s00709-015-0933-z] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/16/2015] [Accepted: 12/17/2015] [Indexed: 06/05/2023]
Abstract
Urdbean leaf crinkle disease (ULCD) is an economically significant widespread and devastating disease resulting in extreme crinkling, puckering and rugosity of leaves inflicting heavy yield losses annually in major urdbean-producing countries of the world. This disease is caused by urdbean leaf crinkle virus (ULCV). Urdbean (Vigna mungo L. Hepper) is relatively more susceptible than other pulses to leaf crinkle disease. Urdbean is an important and useful crop cultivated in various parts of South-East Asia and well adapted for cultivation under semi-arid and subtropical conditions. Aphids, insects and whiteflies have been reported as vectors of the disease. The virus is also transmitted through sap inoculation, grafting and seed. The loss in seed yield in ULCD-affected urdbean crop ranges from 35 to 81%, which is dependent upon type of genotype location and infection time. The diseased material and favourable climatic conditions contribute for the widespread viral disease. Anatomical and biochemical changes take place in the affected diseased plants. Genetic variations have been reported in the germplasm screening which suggest continuous screening of available varieties and new germplasm to search for new traits (new genes) and identify new sources of disease resistance. There are very few reports on breeding programmes for the development and release of varieties tolerant to ULCD. Mostly random amplified polymorphic DNA (RAPD) as well as inter-simple sequence repeat (ISSR) molecular markers have been utilized for fingerprinting of blackgram, and a few reports are there on sequence-tagged micro-satellite site (STMS) markers. There are so many RNA viruses which have also developed strategies to counteract silencing process by encoding suppressor proteins that create hindrances in the process. But, in the case of ULCV, there is no report available indicating which defence pathway is operating for its resistance in the plants and whether same silencing suppression strategy is also followed by this virus causing leaf crinkle disease in urdbean. The antiviral principles (AVP) present in leaf extracts of several plants are known to inhibit infection by many viruses. Many chemicals have been reported as inhibitors of virus replication in plants. Raising the barrier crops also offers an effective solution to control the spread of virus.
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Affiliation(s)
| | - Krishna Kumar
- Indian Agricultural Research Institute, Pusa, New Delhi, 110012, India
| | - Manoj Prasad
- National Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi, 110067, India
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