1
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Kral M, Dendisova M, Svoboda J, Cernescu A, Svecova M, Johnson CM, Pop-Georgievski O, Matejka P. Nano-FTIR spectroscopy of surface confluent polydopamine films - What is the role of deposition time and substrate material? Colloids Surf B Biointerfaces 2024; 235:113769. [PMID: 38306803 DOI: 10.1016/j.colsurfb.2024.113769] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2023] [Revised: 01/20/2024] [Accepted: 01/24/2024] [Indexed: 02/04/2024]
Abstract
Polydopamine (PDA) is a widely used anchoring layer for multiple purposes. While simple to prepare, PDA is characterized by high chemical and topological diversity, which can limit its versatility. Unraveling the formation mechanism and physicochemical properties of continuous confluent layer and adherent nanoparticles on the nanoscale is crucial to further extend the prospective applications of PDA. Utilizing nano-FTIR spectroscopy, we investigate layers of PDA on three different substrates (silicon/silicon dioxide, nitrogen-doped titanium oxide, and gold substrates) at varying times of deposition (ToD). We observed a good correlation between the nano-FTIR and macroscopic FTIR spectra that reflected the changes in the relative abundance of PDA and polymerization intermediates as ToD increased. To gain analytical power, we utilized the principal component analysis (PCA) and extracted additional information from the resulting loadings spectral curves and data distribution in the score plots. We revealed a higher variability of the spectra of ultrathin surface confluent layers compared to the adherent nanoparticles. While the spectra of nanoparticles showed no apparent dependency on either ToD or the substrate material, the spectra of layers were highly affected by the increasing ToD and exhibited a rise in the absorption of PDA. Concomitantly, the spectra of layers grouped according to the substrate material at the lowest ToD point to the fact that the substrate material affects the PDA's initial physicochemical structure. The observed separation gradually diminished with the increasing ToD as the PDA physicochemical structure became less influenced by the substrate material.
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Affiliation(s)
- Martin Kral
- Department of Physical Chemistry, Faculty of Chemical Engineering, University of Chemistry and Technology, 166 28 Prague 6, Czech Republic
| | - Marcela Dendisova
- Department of Physical Chemistry, Faculty of Chemical Engineering, University of Chemistry and Technology, 166 28 Prague 6, Czech Republic.
| | - Jan Svoboda
- Department of Chemistry and Physics of Surfaces and Interfaces, Institute of Macromolecular Chemistry, Czech Academy of Sciences, 162 06 Prague 6, Czech Republic
| | - Adrian Cernescu
- Attocube systems AG, Eglfinger Weg 2, D-85540 Haar, Munich, Germany
| | - Marie Svecova
- Division of Surface and Corrosion Science, Department of Chemistry, KTH Royal Institute of Technology, SE-100 44 Stockholm, Sweden
| | - C Magnus Johnson
- Division of Surface and Corrosion Science, Department of Chemistry, KTH Royal Institute of Technology, SE-100 44 Stockholm, Sweden
| | - Ognen Pop-Georgievski
- Department of Chemistry and Physics of Surfaces and Interfaces, Institute of Macromolecular Chemistry, Czech Academy of Sciences, 162 06 Prague 6, Czech Republic
| | - Pavel Matejka
- Department of Physical Chemistry, Faculty of Chemical Engineering, University of Chemistry and Technology, 166 28 Prague 6, Czech Republic
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2
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Choudhury A, Ramakrishnan R, Ghosh D. Structure prediction from spectra amidst dynamical heterogeneity in melanin. Chem Commun (Camb) 2024; 60:2613-2616. [PMID: 38265468 DOI: 10.1039/d3cc06137j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2024]
Abstract
Melanin is a biopolymer pigment that plays a central role in skin photoprotection. Its extensive chemical and dynamical heterogeneity imparts this property through a broad featureless ultraviolet/visible absorption spectrum. Conventionally, the rational design of synthetic photoprotective pigments revolves around establishing the structure-spectra correlation and developing biomimetic materials with desired optical properties. This approach fails to explain the mechanistic details of melanin's absorption spectrum because it arises from an ensemble of structures rather than a local minimum on the potential energy surface. Here, we propose an inverse design approach to elucidate the contributions of dominant chromophoric units in various wavelength domains of the melanin spectrum.
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Affiliation(s)
- Arpan Choudhury
- School of Chemical Sciences, Indian Association for the Cultivation of Science, Kolkata 700032, India.
| | | | - Debashree Ghosh
- School of Chemical Sciences, Indian Association for the Cultivation of Science, Kolkata 700032, India.
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3
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Cardia R, Dardenne N, Mula G, Pinna E, Rignanese GM, Charlier JC, Cappellini G. First-Principles Investigation of the Optical Properties of Eumelanin Protomolecules. J Phys Chem A 2023; 127:10797-10806. [PMID: 38109190 DOI: 10.1021/acs.jpca.3c04898] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2023]
Abstract
Using first-principles calculations, we investigate the absorption spectra (in the near-infrared, visible, and first UV range) of the two most probable eumelanin tetrameric molecules exhibiting either a linear open-chain or a cyclic porphyrine-like configuration. In order to simulate a realistic molecular system, an implicit solvent model is used in our calculations to mimic the effect of the solvated environment around the eumelanin molecule. Although the presence of solvent is found not to significantly affect the absorption pattern of both molecules, the onset of the spectra are shifted toward higher energies, especially for the linear tetramer. Interestingly, the absorption spectra and optical onsets of the two molecules differ significantly both in a vacuum and in ethanol. However, the two predicted spectra do not allow us to definitely discriminate between the two configurations when comparing the theoretical predictions with the available experimental spectrum. In addition, a mix of the two eumelanin configurations (close to fifty-fifty) leads to a maximum overlap between theoretical and experimental spectra. Consequently, this theoretical research shows that deeper insight can be gained using beyond DFT techniques on the real form of eumelanin protomolecules present in living systems as well as on their possible use in hybrid solar cells.
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Affiliation(s)
- Roberto Cardia
- Department of Physics, Università degli Studi di Cagliari, Cittadella Universitaria I-09042 Monserrato, Cagliari, Italy
| | - Nicolas Dardenne
- Institute of Condensed Matter and Nanosciences, Université catholique de Louvain (UCLouvain), B-1348 Louvain-la-Neuve, Belgium
| | - Guido Mula
- Department of Physics, Università degli Studi di Cagliari, Cittadella Universitaria I-09042 Monserrato, Cagliari, Italy
| | - Elisa Pinna
- Department of Physics, Università degli Studi di Cagliari, Cittadella Universitaria I-09042 Monserrato, Cagliari, Italy
| | - Gian-Marco Rignanese
- Institute of Condensed Matter and Nanosciences, Université catholique de Louvain (UCLouvain), B-1348 Louvain-la-Neuve, Belgium
- European Theoretical Spectroscopy Facility (ETSF)
| | - Jean-Christophe Charlier
- Institute of Condensed Matter and Nanosciences, Université catholique de Louvain (UCLouvain), B-1348 Louvain-la-Neuve, Belgium
- European Theoretical Spectroscopy Facility (ETSF)
| | - Giancarlo Cappellini
- Department of Physics, Università degli Studi di Cagliari, Cittadella Universitaria I-09042 Monserrato, Cagliari, Italy
- European Theoretical Spectroscopy Facility (ETSF)
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4
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Alzain AA, Elbadwi FA, Mukhtar RM, Shoaib TH, Abdelmoniem N, Miski SF, Ghazawi KF, Alsulaimany M, Mohamed SGA, Ainousah BE, Hussein HGA, Mohamed GA, Ibrahim SRM. Design of new Mcl-1 inhibitors for cancer using fragments hybridization, molecular docking, and molecular dynamics studies. J Biomol Struct Dyn 2023:1-13. [PMID: 37962580 DOI: 10.1080/07391102.2023.2281637] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/09/2023] [Accepted: 11/04/2023] [Indexed: 11/15/2023]
Abstract
Apoptosis is a critical process that regulates cell survival and death and plays an essential role in cancer development. The Bcl-2 protein family, including myeloid leukemia 1 (Mcl-1), is a key regulator of the intrinsic apoptosis pathway, and its overexpression in many human cancers has prompted efforts to develop Mcl-1 inhibitors as potential anticancer agents. In this study, we aimed to design new Mcl-1 inhibitors using various computational techniques. First, we used the Mcl-1 receptor-ligand complex to build an e-pharmacophore hypothesis and screened a library of 567,000 fragments from the Enamine database. We obtained 410 fragments and used them to design 92,384 novel compounds, which we then docked into the Mcl-1 binding cavity using HTVS, SP, and XP docking modes of Glide. To assess their suitability as drug candidates, we conducted MM-GBSA calculations and ADME prediction, leading to the identification of 10 compounds with excellent binding affinity and favorable pharmacokinetic properties. To further investigate the interaction strength, we performed molecular dynamics simulations on the top three Mcl-1 receptor-ligand complexes to study their interaction stability. Overall, our findings suggest that these compounds have promising potential as anticancer agents, pending further experimental validation such as Mcl-1 apoptosis Assay. By combining experimental methods with various in silico approaches, these techniques prove to be invaluable for identifying novel drug candidates with distinct therapeutic applications using fragment-based drug design. This methodology has the potential to expedite the drug discovery process while also reducing its costs.Communicated by Ramaswamy H. Sarma.
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Affiliation(s)
- Abdulrahim A Alzain
- Department of Pharmaceutical Chemistry, Faculty of Pharmacy, University of Gezira, Wad Madani, Sudan
| | - Fatima A Elbadwi
- Department of Pharmaceutical Chemistry, Faculty of Pharmacy, University of Gezira, Wad Madani, Sudan
| | - Rua M Mukhtar
- Department of Pharmaceutical Chemistry, Faculty of Pharmacy, University of Gezira, Wad Madani, Sudan
| | - Tagyedeen H Shoaib
- Department of Pharmaceutical Chemistry, Faculty of Pharmacy, University of Gezira, Wad Madani, Sudan
| | - Nihal Abdelmoniem
- Department of Pharmaceutical Chemistry, Faculty of Pharmacy, University of Gezira, Wad Madani, Sudan
| | - Samar F Miski
- Department of Pharmacology and Toxicology, College of Pharmacy, Taibah University, Al-Madinah Al-Munawwarah, Saudi Arabia
| | - Kholoud F Ghazawi
- Pharmacy Practice Department, College of Pharmacy, Umm Al-Qura University, Makkah, Saudi Arabia
| | - Marwa Alsulaimany
- Department of Pharmacognosy & Pharmaceutical Chemistry, College of Pharmacy, Taibah University, Medina, Saudi Arabia
| | | | - Bayan E Ainousah
- Department of Pharmaceutical Sciences, Faculty of Pharmacy, Umm Al-Qura University, Makkah, Saudi Arabia
| | - Hazem G A Hussein
- Preparatory Year Program, Batterjee Medical College, Jeddah, Saudi Arabia
| | - Gamal A Mohamed
- Department of Natural Products and Alternative Medicine, Faculty of Pharmacy, King Abdulaziz University, Jeddah, Saudi Arabia
| | - Sabrin R M Ibrahim
- Preparatory Year Program, Department of Chemistry, Batterjee Medical College, Jeddah, Saudi Arabia
- Department of Pharmacognosy, Faculty of Pharmacy, Assiut University, Assiut, Egypt
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5
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Shen Y, Su R, Hao D, Xu X, Reches M, Min J, Chang H, Yu T, Li Q, Zhang X, Wang Y, Wang Y, Qi W. Enzymatic polymerization of enantiomeric L-3,4-dihydroxyphenylalanine into films with enhanced rigidity and stability. Nat Commun 2023; 14:3054. [PMID: 37237008 DOI: 10.1038/s41467-023-38845-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/06/2022] [Accepted: 05/18/2023] [Indexed: 05/28/2023] Open
Abstract
L-3,4-dihydroxyphenylalanine is an important molecule in the adhesion of mussels, and as an oxidative precursor of natural melanin, it plays an important role in living system. Here, we investigate the effect of the molecular chirality of 3,4-dihydroxyphenylalanine on the properties of the self-assembled films by tyrosinase-induced oxidative polymerization. The kinetics and morphology of pure enantiomers are completely altered upon their co-assembly, allowing the fabrication of layer-to-layer stacked nanostructures and films with improved structural and thermal stability. The different molecular arrangements and self-assembly mechanisms of the L+D-racemic mixtures, whose oxidation products have increased binding energy, resulting in stronger intermolecular forces, which significantly increases the elastic modulus. This study provides a simple pathway for the fabrication of biomimetic polymeric materials with enhanced physicochemical properties by controlling the chirality of monomers.
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Affiliation(s)
- Yuhe Shen
- State Key Laboratory of Chemical Engineering, School of Chemical Engineering and Technology, Tianjin University, 300072, Tianjin, P. R. China
| | - Rongxin Su
- State Key Laboratory of Chemical Engineering, School of Chemical Engineering and Technology, Tianjin University, 300072, Tianjin, P. R. China
- Tianjin Key Laboratory of Membrane Science and Desalination Technology, 300072, Tianjin, P. R. China
- Collaborative Innovation Center of Chemical Science and Engineering (Tianjin), 300072, Tianjin, P. R. China
| | - Dongzhao Hao
- State Key Laboratory of Chemical Engineering, School of Chemical Engineering and Technology, Tianjin University, 300072, Tianjin, P. R. China
| | - Xiaojian Xu
- State Key Laboratory of Chemical Engineering, School of Chemical Engineering and Technology, Tianjin University, 300072, Tianjin, P. R. China
| | - Meital Reches
- Institute of Chemistry, the Hebrew University, Jerusalem, 91904, Israel
| | - Jiwei Min
- State Key Laboratory of Chemical Engineering, School of Chemical Engineering and Technology, Tianjin University, 300072, Tianjin, P. R. China
| | - Heng Chang
- State Key Laboratory of Chemical Engineering, School of Chemical Engineering and Technology, Tianjin University, 300072, Tianjin, P. R. China
| | - Tao Yu
- State Key Laboratory of Chemical Engineering, School of Chemical Engineering and Technology, Tianjin University, 300072, Tianjin, P. R. China
| | - Qing Li
- State Key Laboratory of Chemical Engineering, School of Chemical Engineering and Technology, Tianjin University, 300072, Tianjin, P. R. China
| | - Xiaoyu Zhang
- State Key Laboratory of Component-based Chinese Medicine, Tianjin University of Traditional Chinese Medicine, 301617, Tianjin, China
| | - Yuefei Wang
- State Key Laboratory of Component-based Chinese Medicine, Tianjin University of Traditional Chinese Medicine, 301617, Tianjin, China.
- Haihe Laboratory of Modern Chinese Medicine, 301617, Tianjin, China.
| | - Yuefei Wang
- State Key Laboratory of Chemical Engineering, School of Chemical Engineering and Technology, Tianjin University, 300072, Tianjin, P. R. China.
- Tianjin Key Laboratory of Membrane Science and Desalination Technology, 300072, Tianjin, P. R. China.
- Key Laboratory of Polymeric Materials Design and Synthesis for Biomedical Function, Soochow University, 215123, Suzhou, China.
| | - Wei Qi
- State Key Laboratory of Chemical Engineering, School of Chemical Engineering and Technology, Tianjin University, 300072, Tianjin, P. R. China.
- Tianjin Key Laboratory of Membrane Science and Desalination Technology, 300072, Tianjin, P. R. China.
- Collaborative Innovation Center of Chemical Science and Engineering (Tianjin), 300072, Tianjin, P. R. China.
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6
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Terranova ML. Prominent Roles and Conflicted Attitudes of Eumelanin in the Living World. Int J Mol Sci 2023; 24:ijms24097783. [PMID: 37175490 PMCID: PMC10178024 DOI: 10.3390/ijms24097783] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/26/2023] [Revised: 04/17/2023] [Accepted: 04/22/2023] [Indexed: 05/15/2023] Open
Abstract
Eumelanin, a macromolecule widespread in all the living world and long appreciated for its protective action against harmful UV radiation, is considered the beneficial component of the melanin family (ευ means good in ancient Greek). This initially limited picture has been rather recently extended and now includes a variety of key functions performed by eumelanin in order to support life also under extreme conditions. A lot of still unexplained aspects characterize this molecule that, in an evolutionary context, survived natural selection. This paper aims to emphasize the unique characteristics and the consequent unusual behaviors of a molecule that still holds the main chemical/physical features detected in fossils dating to the late Carboniferous. In this context, attention is drawn to the duality of roles played by eumelanin, which occasionally reverses its functional processes, switching from an anti-oxidant to a pro-oxidant behavior and implementing therefore harmful effects.
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Affiliation(s)
- Maria Letizia Terranova
- Dipartimento Scienze e Tecnologie Chimiche, Università degli Studi di Roma "Tor Vergata", Via della Ricerca Scientifica, 00133 Roma, Italy
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7
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Petran A, Filip C, Bogdan D, Zimmerer C, Beck S, Radu T, Liebscher J. Oxidative Polymerization of 3,4-Dihydroxybenzylamine─The Lower Homolog of Dopamine. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2023; 39:5610-5620. [PMID: 37022985 DOI: 10.1021/acs.langmuir.3c00604] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/19/2023]
Abstract
Polydopamine (PDA) formed by oxidative polymerization of dopamine has attracted wide interest because of its unique properties, in particular its strong adhesion to almost all types of surfaces. 3,4-Dihydroxybenzylamine (DHBA) as the lower homolog of PDA also contains a catechol unit and an amino group and thus can be expected to exhibit a similar adhesion and reaction behavior. In fact, autoxidation of DHBA with air in 2-amino-2-hydroxymethyl-propane-1,3-diol (Tris) buffer gives rise to deeply colored oligomer/polymer products (poly(3,4-dihydroxybenzylamine) (PDHBA)) that strongly adhere to several surfaces. Here, the material is characterized by solid-state NMR spectroscopy, Fourier transform infrared (FTIR) spectroscopy, X-ray photoelectron spectroscopy (XPS), electron spin resonance (ESR) spectroscopy, mass spectrometry, and atomic force microscopy (AFM). Reaction pathways were rationalized taking into consideration the analytical results that show similarity to PDA chemistry, but also considering differences, leading to a more complex reaction behavior and thus to new structures not found in PDA.
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Affiliation(s)
- Anca Petran
- National Institute for Research and Development of Isotopic and Molecular Technologies, 67-103 Donat Street, 400293 Cluj-Napoca, Romania
| | - Claudiu Filip
- National Institute for Research and Development of Isotopic and Molecular Technologies, 67-103 Donat Street, 400293 Cluj-Napoca, Romania
| | - Diana Bogdan
- National Institute for Research and Development of Isotopic and Molecular Technologies, 67-103 Donat Street, 400293 Cluj-Napoca, Romania
| | - Cordelia Zimmerer
- Leibniz-Institut für Polymerforschung Dresden e.V., Hohe Str. 6, 01056 Dresden, Germany
| | - Sebastian Beck
- Department of Chemistry, Humboldt-Universität zu Berlin, Brook-Taylor-Str. 2, 12489 Berlin, Germany
| | - Teodora Radu
- National Institute for Research and Development of Isotopic and Molecular Technologies, 67-103 Donat Street, 400293 Cluj-Napoca, Romania
| | - Jürgen Liebscher
- National Institute for Research and Development of Isotopic and Molecular Technologies, 67-103 Donat Street, 400293 Cluj-Napoca, Romania
- Department of Chemistry, Humboldt-Universität zu Berlin, Brook-Taylor-Str. 2, 12489 Berlin, Germany
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Brash DE, Goncalves LCP. Chemiexcitation: Mammalian Photochemistry in the Dark †. Photochem Photobiol 2023; 99:251-276. [PMID: 36681894 PMCID: PMC10065968 DOI: 10.1111/php.13781] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/07/2022] [Accepted: 01/18/2023] [Indexed: 01/23/2023]
Abstract
Light is one way to excite an electron in biology. Another is chemiexcitation, birthing a reaction product in an electronically excited state rather than exciting from the ground state. Chemiexcited molecules, as in bioluminescence, can release more energy than ATP. Excited states also allow bond rearrangements forbidden in ground states. Molecules with low-lying unoccupied orbitals, abundant in biology, are particularly susceptible. In mammals, chemiexcitation was discovered to transfer energy from excited melanin, neurotransmitters, or hormones to DNA, creating the lethal and carcinogenic cyclobutane pyrimidine dimer. That process was initiated by nitric oxide and superoxide, radicals triggered by ultraviolet light or inflammation. Several poorly understood chronic diseases share two properties: inflammation generates those radicals across the tissue, and cells that die are those containing melanin or neuromelanin. Chemiexcitation may therefore be a pathogenic event in noise- and drug-induced deafness, Parkinson's disease, and Alzheimer's; it may prevent macular degeneration early in life but turn pathogenic later. Beneficial evolutionary selection for excitable biomolecules may thus have conferred an Achilles heel. This review of recent findings on chemiexcitation in mammalian cells also describes the underlying physics, biochemistry, and potential pathogenesis, with the goal of making this interdisciplinary phenomenon accessible to researchers within each field.
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Affiliation(s)
- Douglas E. Brash
- Department of Therapeutic Radiology, Yale School of Medicine, New Haven, CT 06520-8040, USA
- Yale Cancer Center, Yale School of Medicine, New Haven, CT 06520-8028, USA
| | - Leticia C. P. Goncalves
- Department of Therapeutic Radiology, Yale School of Medicine, New Haven, CT 06520-8040, USA
- Institut de Chimie de Nice CNRS UMR7272, Université Côte d’Azur, 28 Avenue Valrose 06108 Nice, France
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Král M, Dendisová M, Matějka P, Svoboda J, Pop-Georgievski O. Infrared imaging of surface confluent polydopamine (PDA) films at the nanoscale. Colloids Surf B Biointerfaces 2023; 221:112954. [DOI: 10.1016/j.colsurfb.2022.112954] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/02/2022] [Revised: 10/13/2022] [Accepted: 10/18/2022] [Indexed: 11/06/2022]
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10
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Structural Investigation of DHICA Eumelanin Using Density Functional Theory and Classical Molecular Dynamics Simulations. MOLECULES (BASEL, SWITZERLAND) 2022; 27:molecules27238417. [PMID: 36500509 PMCID: PMC9738096 DOI: 10.3390/molecules27238417] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/28/2022] [Revised: 11/21/2022] [Accepted: 11/22/2022] [Indexed: 12/05/2022]
Abstract
Eumelanin is an important pigment, for example, in skin, hair, eyes, and the inner ear. It is a highly heterogeneous polymer with 5,6-dihydroxyindole-2-carboxylic acid (DHICA) and 5,6-dihydroxyindole (DHI) building blocks, of which DHICA is reported as the more abundant in natural eumelanin. The DHICA-eumelanin protomolecule consists of three building blocks, indole-2-carboxylic acid-5,6-quinone (ICAQ), DHICA and pyrrole-2,3,5-tricarboxylic acid (PTCA). Here, we focus on the self-assembly of DHICA-eumelanin using multi-microsecond molecular dynamics (MD) simulations at various concentrations in aqueous solutions. The molecule was first parameterized using density functional theory (DFT) calculations. Three types of systems were studied: (1) uncharged DHICA-eumelanin, (2) charged DHICA-eumelanin corresponding to physiological pH, and (3) a binary mixture of both of the above protomolecules. In the case of uncharged DHICA-eumelanin, spontaneous aggregation occurred and water molecules were present inside the aggregates. In the systems corresponding to physiological pH, all the carboxyl groups are negatively charged and the DHICA-eumelanin model has a net charge of -4. The effect of K+ ions as counterions was investigated. The results show high probability of binding to the deprotonated oxygens of the carboxylate anions in the PTCA moiety. Furthermore, the K+ counterions increased the solubility of DHICA-eumelanin in its charged form. A possible explanation is that the charged protomolecules favor binding to the K+ ions rather than aggregating and binding to other protomolecules. The binary mixtures show aggregation of uncharged DHICA-eumelanins; unlike the charged systems with no aggregation, a few charged DHICA-eumelanins are present on the surface of the uncharged aggregation, binding to the K+ ions.
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11
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Beilinson Y, Rassabina A, Lunev I, Faizullin D, Greenbaum A, Salnikov V, Zuev Y, Minibayeva F, Feldman Y. The dielectric response of hydrated water as a structural signature of nanoconfined lichen melanins. Phys Chem Chem Phys 2022; 24:22624-22633. [PMID: 36102934 DOI: 10.1039/d2cp01383e] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Lichens are unique symbiotic organisms from a mutually beneficial alliance of fungi and algae/cyanobacteria that successfully survive extreme temperatures and drought conditions. Most probably such extraordinary vitality of lichens is underlain by melanins, one of the main structural and chemical lichen components, and their mutual relationship with residual water. In this paper, we propose mechanisms, which allow lichens to store up the extra water in their structure. Melanins that are constituents of the cortical lichen layer and presumably contribute to unique water-lichen interactions are chosen for physical experiments in a wide temperature domain. Two melanin pigments extracted from different lichens are studied here - eumelanin from Lobaria pulmonaria and allomelanin from Cetraria islandica. To investigate the inner melanin structure and water-melanin interactions, FTIR and BDS techniques are applied. The BDS technique was used in a wide temperature region of 123-293 K for melanins with various hydration levels. The relaxation processes related to the confinement of supercooled water - in melanins are observed and discussed in details. At medium and high hydration levels, the relaxation process in two melanins of different chemical compositions and supramolecular structures exhibits a well-known crossover that was already observed in many types of confinements. The analysis of FTIR and BDS results helps to clarify the lichen-water interaction processes.
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Affiliation(s)
- Yael Beilinson
- Department of Applied Physics, Soft Condensed Matter Laboratory, The Hebrew University of Jerusalem, Edmond J. Safra Campus, Jerusalem, 9190401, Israel.
| | - Anna Rassabina
- Kazan Institute of Biochemistry and Biophysics, FRC Kazan Scientific Center of RAS, Lobachevsky str. 2/31, Kazan, 420111, Russian Federation.
| | - Ivan Lunev
- Kazan Federal University, Institute of Physics, Kremlevskaya str.18, Kazan, 420008, Russian Federation
| | - Dzhigangir Faizullin
- Kazan Institute of Biochemistry and Biophysics, FRC Kazan Scientific Center of RAS, Lobachevsky str. 2/31, Kazan, 420111, Russian Federation.
| | - Anna Greenbaum
- Department of Applied Physics, Soft Condensed Matter Laboratory, The Hebrew University of Jerusalem, Edmond J. Safra Campus, Jerusalem, 9190401, Israel. .,Racah Institute of Physics, The Hebrew University of Jerusalem, Edmond J. Safra Campus, Jerusalem, 9190401, Israel
| | - Vadim Salnikov
- Kazan Institute of Biochemistry and Biophysics, FRC Kazan Scientific Center of RAS, Lobachevsky str. 2/31, Kazan, 420111, Russian Federation.
| | - Yuriy Zuev
- Kazan Institute of Biochemistry and Biophysics, FRC Kazan Scientific Center of RAS, Lobachevsky str. 2/31, Kazan, 420111, Russian Federation.
| | - Farida Minibayeva
- Kazan Institute of Biochemistry and Biophysics, FRC Kazan Scientific Center of RAS, Lobachevsky str. 2/31, Kazan, 420111, Russian Federation.
| | - Yuri Feldman
- Department of Applied Physics, Soft Condensed Matter Laboratory, The Hebrew University of Jerusalem, Edmond J. Safra Campus, Jerusalem, 9190401, Israel.
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12
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Altındağ F, Boğokşayan S, Bayram S. Eumelanin protects the liver against diethylnitrosamine-induced liver injury. Toxicology 2022; 480:153311. [PMID: 36113623 DOI: 10.1016/j.tox.2022.153311] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2022] [Revised: 08/30/2022] [Accepted: 09/02/2022] [Indexed: 11/26/2022]
Abstract
This study aims to evaluate in vivo protective effects of eumelanin (EU) on diethylnitrosamine (DEN)-induced liver injury. Wistar albino male rats were divided into 6 groups (n = 6), Control, DMSO, DEN, DEN + EU10, DEN + EU15, and DEN + EU20. Animals in the DEN group were injected i.p a single dose of 200 mg/kg DEN, DEN + EU10 group was given 10 mg/kg EU, DEN + EU15 group was given 15 mg/kg, DEN + EU20 group was given 20 mg/kg EU for a week. The results showed that there was no significant difference in vessel volume density between the groups. Inflammatory cell infiltration, hydropic degeneration, and necrotic cells were observed in the DEN group, and these histopathological changes were significantly reduced in all treatment groups. Although there was a low intensity of PAS-positive staining in the DEN groups, moderate staining was observed in the treatment groups. While Caspase-3, PCNA, TNF-α, and IL-6 expressions increased in the DEN group, their expressions decreased in the EU-treated groups. DEN increased AST, ALT, and MDA levels and decreased CAT levels. In particular, the EU10 dose significantly improved these parameters. The present study revealed that eumelanin has protective effects against DEN-induced liver injury.
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Affiliation(s)
- Fikret Altındağ
- Department of Histology and Embryology, Van Yüzüncü Yıl University Faculty of Medicine, Van, Turkey.
| | - Seda Boğokşayan
- Department of Histology and Embryology, Van Yüzüncü Yıl University Faculty of Medicine, Van, Turkey
| | - Sinan Bayram
- Department of Medical Services and Techniques, Vocational School of Health Services, Bayburt University, Bayburt, Turkey
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13
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Li Z, Hu K, Feng X. Co-depositing polyvinylamine and dopamine to enhance membrane performance for concentration of KAc solutions via sweeping air pervaporation. J Memb Sci 2022. [DOI: 10.1016/j.memsci.2022.120664] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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14
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Soltani S, Sowlati-Hashjin S, Tetsassi Feugmo CG, Karttunen M. Free Energy and Stacking of Eumelanin Nanoaggregates. J Phys Chem B 2022; 126:1805-1818. [PMID: 35175060 DOI: 10.1021/acs.jpcb.1c07884] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Eumelanin, a member of the melanin family, is a black-brown insoluble pigment. It possesses a broad range of properties such as antioxidation, free radical scavenging, photoprotection, and charge carrier transportation. Surprisingly, the exact molecular structure of eumelanin remains undefined. It is, however, generally considered to consist of two main building blocks, 5,6-dihydroxyindole (DHI) and 5,6- dihydroxyindole carboxylic acid (DHICA). We focus on DHI and report, for the first time, a computational investigation of the structural properties of DHI-eumelanin aggregates in aqueous solutions. First, multimicrosecond molecular dynamics (MD) simulations at different concentrations were performed to investigate the aggregation and ordering of tetrameric DHI-eumelanin protomolecules. This was followed by umbrella sampling (US) and density functional theory (DFT) calculations to study the physical mechanisms of stacking. Aggregation occurs through formation of nanoscale stacks and was observed in all systems. Further analyses showed that aggregation and coarsening of the domains is due to a decrease in hydrogen bonds between the eumelanins and water; while domains exist, there is no long-range order. The results show noncovalent stacks with the interlayer distance between eumelanin protomolecules being less than 3.5 Å. This is in good agreement with transmission electron microscopy data. Both free energy calculations and DFT revealed strong stacking interactions. The electrostatic potential map provides an explanation and a rationale for the slightly sheared relative orientations and, consequently, for the curved shapes of the nanoscale domains.
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Affiliation(s)
- Sepideh Soltani
- Department of Physics and Astronomy, The University of Western Ontario, 1151 Richmond Street, London, Ontario N6A 3K7, Canada.,The Centre of Advanced Materials and Biomaterials Research, The University of Western Ontario, 1151 Richmond Street, London, Ontario N6A 5B7, Canada
| | - Shahin Sowlati-Hashjin
- Institute of Biomedical Engineering, University of Toronto, Toronto, Ontario M5S 3G9, Canada
| | - Conrard Giresse Tetsassi Feugmo
- National Research Council Canada, Energy Mining and Environment, Mississauga, Ontario L5K 1B1, Canada.,Department of Chemistry, The University of Western Ontario, 1151 Richmond Street, London, Ontario N6A 5B7, Canada
| | - Mikko Karttunen
- The Centre of Advanced Materials and Biomaterials Research, The University of Western Ontario, 1151 Richmond Street, London, Ontario N6A 5B7, Canada.,Department of Physics and Astronomy, The University of Western Ontario, 1151 Richmond Street, London, Ontario N6A 3K7, Canada.,Department of Chemistry, The University of Western Ontario, 1151 Richmond Street, London, Ontario N6A 5B7, Canada
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15
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Szukowska M, Popenda Ł, Coy E, Filip C, Grajewski J, Kempiński M, Kim Y, Mrówczyński R. Replacing amine by azide: Dopamine azide polymerization triggered by sodium periodate. Polym Chem 2022. [DOI: 10.1039/d2py00293k] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Polydopamine (PDA) have been widely described for a range of biomedical and surface engineering applications. However the structure of PDA remains elusive due to the insoluble nature of the polymer....
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16
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Assis Oliveira LB, Fonseca TL, Cabral BJC, Coutinho K, Canuto S. Preferential solvation and optical properties of eumelanin building blocks in binary mixture of methanol and water. J Chem Phys 2021; 155:174504. [PMID: 34742206 DOI: 10.1063/5.0065723] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Abstract
Employing a sequential quantum mechanical/molecular mechanical approach for polar protic solvents, we study the absorption spectrum of eumelanin building blocks including monomers, dimers, and tetramers in pure water and methanol and three water-methanol binary mixtures having water molar fractions (Xw = 0.25, 0.50, and 0.75). The binary mixture of solvents is a common situation in experiments, but theoretical studies are limited to the use of continuum models. Here, we use explicit solvent molecules, and specific solute-solvent interaction is analyzed and seen to play an important role. Effects of the electronic polarization of solute by the environment were included using a reliable iterative scheme. The results illustrate that the monomers, dimers, and tetramers are preferably solvated by methanol, but the composition of the mixture in the vicinity of the solute molecules is different from the bulk composition with a preferential microsolvation (hydrogen bonds) in water for most species considered. It is observed that the short-range electrostatic polarization effects of the hydrogen bonds lead to a slight blue shift of the excitation energies when the concentration of water in the mixture is enhanced. For the same species, there is an enhancement of the higher-energy absorption intensity caused by long-range electrostatic interactions with the environment and that the behavior of the experimental spectrum, which is characterized by a nearly monotonic decay from the ultraviolet to the infrared, is qualitatively reproduced by the superposition of the absorption spectra of monomers, dimers, and tetramers in the liquid phase.
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Affiliation(s)
| | - Tertius L Fonseca
- Instituto de Física da Universidade Federal de Goiás, 74690-900 Goiânia, GO, Brazil
| | - Benedito J C Cabral
- BioISI-Biosystems and Integrative Sciences Institute, Faculty of Sciences, University of Lisboa, 1749-016 Lisboa, Portugal
| | - Kaline Coutinho
- Instituto de Física da Universidade de São Paulo, Rua do Matão 1371, 05508-090 São Paulo, SP, Brazil
| | - Sylvio Canuto
- Instituto de Física da Universidade de São Paulo, Rua do Matão 1371, 05508-090 São Paulo, SP, Brazil
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17
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Wang J, Blancafort L. Stability and Optical Absorption of a Comprehensive Virtual Library of Minimal Eumelanin Oligomer Models**. Angew Chem Int Ed Engl 2021. [DOI: 10.1002/ange.202106289] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Jun Wang
- Jiangsu Key Laboratory for Chemistry of Low-Dimensional Materials Jiangsu Engineering Laboratory for Environment Functional Materials School of Chemistry and Chemical Engineering Huaiyin Normal University No.111 West Changjiang Road Huaian 223300 Jiangsu Province P. R. China
- Institut de Química Computacional i Catàlisi and Departament de Química Universitat de Girona, Facultat de Ciències C/M. A. Capmany 69 17003 Girona Spain
| | - Lluís Blancafort
- Institut de Química Computacional i Catàlisi and Departament de Química Universitat de Girona, Facultat de Ciències C/M. A. Capmany 69 17003 Girona Spain
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18
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Understanding the way eumelanin works: A unique example of properties and skills driven by molecular heterogeneity. POLYMER 2021. [DOI: 10.1016/j.polymer.2021.123952] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
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19
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Wang J, Blancafort L. Stability and Optical Absorption of a Comprehensive Virtual Library of Minimal Eumelanin Oligomer Models*. Angew Chem Int Ed Engl 2021; 60:18800-18809. [PMID: 34114313 PMCID: PMC8457142 DOI: 10.1002/anie.202106289] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2021] [Revised: 06/09/2021] [Indexed: 12/11/2022]
Abstract
Eumelanin is responsible for photoprotection in living organisms. It is made of 5,6‐dihydroxyindole (DHI) oligomers. However, lack of detailed structural knowledge limits understanding its function and exploiting its potential in material science. To uncover the relationship between structural stability and optical properties, we have studied a virtual library of 830 DHI dimers. We find a preference for oxidized, polycyclic structures which speaks in favor of graphite‐like structures for the larger oligomers, and propose an electrocyclic formation mechanism. Besides widely considered quinone oxidation patterns, also structures with interfragment double bonds and zwitterionic resonance structures are stable. Future theoretical melanine models will have to cover this diversity, and we introduce a new representative set of 49 stable dimers. Some stable oxidized dimers have absorption energies as low as 1.3 eV. They may be present as substructures in the naturally found oligomers and contribute to the absorption spectrum of the biopolymer.
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Affiliation(s)
- Jun Wang
- Jiangsu Key Laboratory for Chemistry of Low-Dimensional Materials, Jiangsu Engineering Laboratory for Environment Functional Materials, School of Chemistry and Chemical Engineering, Huaiyin Normal University, No.111 West Changjiang Road, Huaian, 223300, Jiangsu Province, P. R. China.,Institut de Química Computacional i Catàlisi and Departament de Química, Universitat de Girona, Facultat de Ciències, C/M. A. Capmany 69, 17003, Girona, Spain
| | - Lluís Blancafort
- Institut de Química Computacional i Catàlisi and Departament de Química, Universitat de Girona, Facultat de Ciències, C/M. A. Capmany 69, 17003, Girona, Spain
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20
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Mostert AB. Melanin, the What, the Why and the How: An Introductory Review for Materials Scientists Interested in Flexible and Versatile Polymers. Polymers (Basel) 2021; 13:1670. [PMID: 34065580 PMCID: PMC8161012 DOI: 10.3390/polym13101670] [Citation(s) in RCA: 19] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/25/2021] [Revised: 05/18/2021] [Accepted: 05/18/2021] [Indexed: 01/13/2023] Open
Abstract
Today, western society is facing challenges to create new medical technologies to service an aging population as well as the ever-increasing e-waste of electronic devices and sensors. A key solution to these challenges will be the use of biomaterials and biomimetic systems. One material that has been receiving serious attention for its biomedical and device applications is eumelanin. Eumelanin, or commonly known as melanin, is nature's brown-black pigment and is a poly-indolequinone biopolymer, which possess unique physical and chemical properties for material applications. Presented here is a review, aimed at polymer and other materials scientists, to introduce eumelanin as a potential material for research. Covered here are the chemical and physical structures of melanin, an overview of its unique physical and chemical properties, as well as a wide array of applications, but with an emphasis on device and sensing applications. The review is then finished by introducing interested readers to novel synthetic protocols and post synthesis fabrication techniques to enable a starting point for polymer research in this intriguing and complex material.
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Affiliation(s)
- A Bernardus Mostert
- Department of Chemistry, Swansea University, Singleton Park, Wales SA2 8PP, UK
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21
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Figon F, Casas J. The integrative biology of pigment organelles, a quantum chemical approach. Integr Comp Biol 2021; 61:1490-1501. [PMID: 33940609 DOI: 10.1093/icb/icab045] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022] Open
Abstract
Coloration is a complex phenotypic trait involving both physical and chemical processes at a multiscale level, from molecules to tissues. Pigments, whose main property is to absorb specific wavelengths of visible light, are usually deposited in specialized organelles or complex matrices comprising proteins, metals, ions and redox compounds, among others. By modulating electronic properties and stability, interactions between pigments and these molecular actors can lead to color tuning. Furthermore, pigments are not only important for visual effects but also provide other critical functions, such as detoxification and antiradical activity. Hence, integrative studies of pigment organelles are required to understand how pigments interact with their cellular environment. In this review, we show how quantum chemistry, a computational method that models the molecular and optical properties of pigments, has provided key insights into the mechanisms by which pigment properties, from color to reactivity, are modulated by their organellar environment. These results allow to rationalize and to predict the way pigments behave in supramolecular complexes, up to the complete modelling of pigment organelles. We also discuss the main limitations of quantum chemistry, emphasizing the need for carrying experimental work with identical vigor. We finally suggest that taking into account the ecology of pigments (i.e. how they interact with these various other cellular components and at higher organizational levels) will lead to a greater understanding of how and why animals are vividly and variably colored, two fundamental questions in organismal biology.
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Affiliation(s)
- Florent Figon
- Institut de Recherche sur la Biologie de l'Insecte, UMR 7261, CNRS-Université de Tours, 37200 Tours, France
| | - Jérôme Casas
- Institut de Recherche sur la Biologie de l'Insecte, UMR 7261, CNRS-Université de Tours, 37200 Tours, France
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22
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Cao W, Zhou X, McCallum NC, Hu Z, Ni QZ, Kapoor U, Heil CM, Cay KS, Zand T, Mantanona AJ, Jayaraman A, Dhinojwala A, Deheyn DD, Shawkey MD, Burkart MD, Rinehart JD, Gianneschi NC. Unraveling the Structure and Function of Melanin through Synthesis. J Am Chem Soc 2021; 143:2622-2637. [PMID: 33560127 DOI: 10.1021/jacs.0c12322] [Citation(s) in RCA: 120] [Impact Index Per Article: 40.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
Abstract
Melanin is ubiquitous in living organisms across different biological kingdoms of life, making it an important, natural biomaterial. Its presence in nature from microorganisms to higher animals and plants is attributed to the many functions of melanin, including pigmentation, radical scavenging, radiation protection, and thermal regulation. Generally, melanin is classified into five types-eumelanin, pheomelanin, neuromelanin, allomelanin, and pyomelanin-based on the various chemical precursors used in their biosynthesis. Despite its long history of study, the exact chemical makeup of melanin remains unclear, and it moreover has an inherent diversity and complexity of chemical structure, likely including many functions and properties that remain to be identified. Synthetic mimics have begun to play a broader role in unraveling structure and function relationships of natural melanins. In the past decade, polydopamine, which has served as the conventional form of synthetic eumelanin, has dominated the literature on melanin-based materials, while the synthetic analogues of other melanins have received far less attention. In this perspective, we will discuss the synthesis of melanin materials with a special focus beyond polydopamine. We will emphasize efforts to elucidate biosynthetic pathways and structural characterization approaches that can be harnessed to interrogate specific structure-function relationships, including electron paramagnetic resonance (EPR) and solid-state nuclear magnetic resonance (ssNMR) spectroscopy. We believe that this timely Perspective will introduce this class of biopolymer to the broader chemistry community, where we hope to stimulate new opportunities in novel, melanin-based poly-functional synthetic materials.
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Affiliation(s)
| | | | | | | | - Qing Zhe Ni
- Department of Chemistry & Biochemistry, University of California, San Diego, La Jolla, California 92093, United States
| | - Utkarsh Kapoor
- Department of Chemical and Biomolecular Engineering, Colburn Laboratory, University of Delaware, Newark, Delaware 19716, United States
| | - Christian M Heil
- Department of Chemical and Biomolecular Engineering, Colburn Laboratory, University of Delaware, Newark, Delaware 19716, United States
| | - Kristine S Cay
- Department of Chemistry & Biochemistry, University of California, San Diego, La Jolla, California 92093, United States
| | - Tara Zand
- Department of Chemistry & Biochemistry, University of California, San Diego, La Jolla, California 92093, United States
| | - Alex J Mantanona
- Department of Chemistry & Biochemistry, University of California, San Diego, La Jolla, California 92093, United States
| | - Arthi Jayaraman
- Department of Chemical and Biomolecular Engineering, Colburn Laboratory, Department of Materials Science and Engineering, University of Delaware, Newark, Delaware 19716, United States
| | - Ali Dhinojwala
- Department of Polymer Science, The University of Akron, Akron, Ohio 44325, United States
| | - Dimitri D Deheyn
- Marine Biology Research Division, Scripps Institution of Oceanography, La Jolla, California 92093-0202, United States
| | - Matthew D Shawkey
- Evolution and Optics of Nanostructures Group, Department of Biology, The University of Ghent, 9000 Ghent, Belgium
| | - Michael D Burkart
- Department of Chemistry & Biochemistry, University of California, San Diego, La Jolla, California 92093, United States
| | - Jeffrey D Rinehart
- Department of Chemistry & Biochemistry, University of California, San Diego, La Jolla, California 92093, United States
| | - Nathan C Gianneschi
- Department of Chemistry & Biochemistry, University of California, San Diego, La Jolla, California 92093, United States
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23
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Ghosh P, Ghosh D. Effect of Dimerization on the Nonradiative Processes of Eumelanin Monomer. J Phys Chem B 2021; 125:547-556. [PMID: 33410319 DOI: 10.1021/acs.jpcb.0c10555] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Eumelanin is a polymeric structure made of dihydroxyindole (DHI) as the basic motif. Since the oxidative polymerization of DHI forms the core of eumelanin, understanding the effect of polymerization on its optical and photoprotective properties is crucial to elucidate the structure-function relationship of eumelanin. In this work, we investigate the effect of dimerization of DHI on the photoprocesses of eumelanin. We observe that there are several low-energy conical intersections and energetically favorable pathways for deactivation of photoexcited dimeric DHI species. While the original deactivation modes of the monomers are still important, in dimers the intermonomer dihedral angles seem to play a central role.
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Affiliation(s)
- Paulami Ghosh
- School of Chemical Sciences, Indian Association for the Cultivation of Science, Kolkata 700032, India
| | - Debashree Ghosh
- School of Chemical Sciences, Indian Association for the Cultivation of Science, Kolkata 700032, India
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24
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Hiroto S. Development of synthetic protocols for porphyrins and their analogs based on distorted structures — a SPP/JPP Young Investigator Award paper. J PORPHYR PHTHALOCYA 2020. [DOI: 10.1142/s1088424620500376] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
Creation of novel [Formula: see text]-conjugated molecules is an important research topic. I describe in this account an approach to this aim that is based on the use of the distorted conformation of porphyrins. Planarization of distorted molecules enables the synthesis of heteroatom-containing porphyrin derivatives. Furthermore, dearomatization reaction proves effective to construct distorted conformations from planar [Formula: see text]-conjugated molecules under mild reaction conditions. According to this protocol, we have succeeded in the synthesis of heteroatom-containing curved-[Formula: see text] conjugated molecules that had never been achieved by conventional protocols. In particular, a nitrogen-embedded buckybowl is the first example of a buckybowl having a heteroatom in its central position, which exhibits unique properties due to the incorporation of the heteroatom in its curved [Formula: see text]-surface.
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Affiliation(s)
- Satoru Hiroto
- Graduate School of Human and Environmental Studies, Kyoto University, Nihonmatsu-cho, Yoshida, Sakyo-ku, Kyoto 606-8501, Japan
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25
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Ghosh D. Computational aspects towards understanding the photoprocesses in eumelanin. WILEY INTERDISCIPLINARY REVIEWS-COMPUTATIONAL MOLECULAR SCIENCE 2020. [DOI: 10.1002/wcms.1505] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Debashree Ghosh
- School of Chemical Sciences Indian Association for the Cultivation of Science Kolkata India
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26
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Chen YC, Kendall T, Yip P, Davy A, Sefcik J, Sutter JU. Influence of Ions and pH on the Formation of Solid- and Liquid-like Melanin. ACS OMEGA 2020; 5:25059-25068. [PMID: 33043184 PMCID: PMC7542583 DOI: 10.1021/acsomega.0c01953] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/28/2020] [Accepted: 09/09/2020] [Indexed: 06/11/2023]
Abstract
Melanin is a natural pigment with broadband absorption and effective ability to dissipate the energy absorbed. The macromolecular structure of melanin shows a delicate balance between short-range ordered and disordered structures without being a random aggregate. The presence of ions or the variation in pH or ionic strength can alter the self-assembly process which subsequently changes the structure of melanin. To understand these relationships, this study investigates the influence of ions and pH in melanin formation. The types of ions present and pH have a profound influence on the formation and structure of melanin particles, while only minor changes are observed in the absorption and excitation-emission analysis. In some conditions, the formation of discernible particles with significant refractive index contrast is avoided while retaining the spectroscopic characteristics of melanin, leading to liquid-like melanin. These findings identify potential pathways which can be used to manipulate the melanin macromolecular structure while providing the desired spectral properties to enable novel bio-engineering applications.
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Affiliation(s)
- Yi-chieh Chen
- Department of Chemical and Process Engineering, University of Strathclyde, James Weir Building, 75 Montrose Street, Glasgow G1 1XJ, U.K.
| | - Thomas Kendall
- Department of Chemical and Process Engineering, University of Strathclyde, James Weir Building, 75 Montrose Street, Glasgow G1 1XJ, U.K.
| | - Philip Yip
- Horiba IBH Ltd., 133 Finnieston Street, Glasgow G3 8HB, Scotland, U.K.
- Photophysics Group, Centre for Molecular Nanometrology, Department
of Physics, The Scottish Universities Physics Alliance, University of Strathclyde, John Anderson Building, 107 Rottenrow, Glasgow G4 0NG, U.K.
| | - Alastair Davy
- Photophysics Group, Centre for Molecular Nanometrology, Department
of Physics, The Scottish Universities Physics Alliance, University of Strathclyde, John Anderson Building, 107 Rottenrow, Glasgow G4 0NG, U.K.
| | - Jan Sefcik
- Department of Chemical and Process Engineering, University of Strathclyde, James Weir Building, 75 Montrose Street, Glasgow G1 1XJ, U.K.
| | - Jens U. Sutter
- Photophysics Group, Centre for Molecular Nanometrology, Department
of Physics, The Scottish Universities Physics Alliance, University of Strathclyde, John Anderson Building, 107 Rottenrow, Glasgow G4 0NG, U.K.
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27
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15N NMR Shifts of Eumelanin Building Blocks in Water: A Combined Quantum Mechanics/Statistical Mechanics Approach. Molecules 2020; 25:molecules25163616. [PMID: 32784827 PMCID: PMC7465604 DOI: 10.3390/molecules25163616] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2020] [Revised: 08/03/2020] [Accepted: 08/04/2020] [Indexed: 02/05/2023] Open
Abstract
Theoretical results for the magnetic shielding of protonated and unprotonated nitrogens of eumelanin building blocks including monomers, dimers, and tetramers in gas phase and water are presented. The magnetic property in water was determined by carrying out Monte Carlo statistical mechanics sampling combined with quantum mechanics calculations based on the gauge-including atomic orbitals approach. The results show that the environment polarization can have a marked effect on nitrogen magnetic shieldings, especially for the unprotonated nitrogens. Large contrasts of the oligomerization effect on magnetic shielding show a clear distinction between eumelanin building blocks in solution, which could be detected in nuclear magnetic resonance experiments. Calculations for a π-stacked structure defined by the dimer of a tetrameric building block indicate that unprotonated N atoms are significantly deshielded upon π stacking, whereas protonated N atoms are slightly shielded. The results stress the interest of NMR experiments for a better understanding of the eumelanin complex structure.
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28
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Al Khatib M, Costa J, Baratto MC, Basosi R, Pogni R. Paramagnetism and Relaxation Dynamics in Melanin Biomaterials. J Phys Chem B 2020; 124:2110-2115. [PMID: 32105072 DOI: 10.1021/acs.jpcb.9b11785] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Abstract
Spectroscopical characterization of melanins is a prior requirement for the efficient tailoring of their radical scavenging, ultraviolet-visible radiation absorption, metal chelation, and natural pigment properties. Electron paramagnetic resonance (EPR), exploiting the common persistent paramagnetism of melanins, represents the elective standard for the structural and dynamical characterization of their constituting radical species. Although melanins are mainly investigated using X-band (9.5 GHz) continuous wave (CW)-EPR, an integration with the application of Q-band (34 GHz) in CW and pulse EPR for the discrimination of melanin pigments of different compositions is presented here. The longitudinal relaxation times measured highlight faster relaxation rates for cysteinyldopa melanin, compared to those of the most common dopa melanin pigment, suggesting pulse EPR spin-lattice relaxation time measurements as a complementary tool for characterization of pigments of interest for biomimetic materials engineering.
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Affiliation(s)
- Maher Al Khatib
- Department of Biotechnology, Chemistry and Pharmacy, Università degli Studi di Siena, Via A. Moro 2, 53100 Siena, Italy
| | - Jessica Costa
- Department of Biotechnology, Chemistry and Pharmacy, Università degli Studi di Siena, Via A. Moro 2, 53100 Siena, Italy
| | - Maria Camilla Baratto
- Department of Biotechnology, Chemistry and Pharmacy, Università degli Studi di Siena, Via A. Moro 2, 53100 Siena, Italy
| | - Riccardo Basosi
- Department of Biotechnology, Chemistry and Pharmacy, Università degli Studi di Siena, Via A. Moro 2, 53100 Siena, Italy
| | - Rebecca Pogni
- Department of Biotechnology, Chemistry and Pharmacy, Università degli Studi di Siena, Via A. Moro 2, 53100 Siena, Italy
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29
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Kohl FR, Grieco C, Kohler B. Ultrafast spectral hole burning reveals the distinct chromophores in eumelanin and their common photoresponse. Chem Sci 2019; 11:1248-1259. [PMID: 34123249 PMCID: PMC8148383 DOI: 10.1039/c9sc04527a] [Citation(s) in RCA: 28] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023] Open
Abstract
Eumelanin, the brown-black pigment found in organisms from bacteria to humans, dissipates solar energy and prevents photochemical damage. While the structure of eumelanin is unclear, it is thought to consist of an extremely heterogeneous collection of chromophores that absorb from the UV to the infrared, additively producing its remarkably broad absorption spectrum. However, the chromophores responsible for absorption by eumelanin and their excited state decay pathways remain highly uncertain. Using femtosecond broadband transient absorption spectroscopy, we address the excited state behavior of chromophore subsets that make up a synthetic eumelanin, DOPA melanin, and probe the heterogeneity of its chromophores. Tuning the excitation light over more than an octave from the UV to the visible and probing with the broadest spectral window used to study any form of melanin to date enable the detection of spectral holes with a linewidth of 0.6 eV that track the excitation wavelength. Transient spectral hole burning is a manifestation of extreme chemical heterogeneity, yet exciting these diverse chromophores unexpectedly produces a common photoinduced absorption spectrum and similar kinetics. This common photoresponse is assigned to the ultrafast formation of immobile charge transfer excitons that decay locally and that are formed among graphene-like chromophores in less than 200 fs. Raman spectroscopy reveals that chromophore heterogeneity in DOPA melanin arises from different sized domains of sp2-hybridized carbon and nitrogen atoms. Furthermore, we identify for the first time striking parallels between the excited state dynamics of eumelanin and disordered carbon nanomaterials, suggesting that they share common structural attributes. Seeing the colors in black: ultrafast transient hole burning spectroscopy reveals the absorption properties of discrete chromophores and their interactions in the skin pigment eumelanin.![]()
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Affiliation(s)
- Forrest R Kohl
- Department of Chemistry and Biochemistry, The Ohio State University 100 West 18th Avenue Columbus Ohio 43210 USA +1-614-688-2635
| | - Christopher Grieco
- Department of Chemistry and Biochemistry, The Ohio State University 100 West 18th Avenue Columbus Ohio 43210 USA +1-614-688-2635
| | - Bern Kohler
- Department of Chemistry and Biochemistry, The Ohio State University 100 West 18th Avenue Columbus Ohio 43210 USA +1-614-688-2635
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30
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El Yakhlifi S, Ball V. Polydopamine as a stable and functional nanomaterial. Colloids Surf B Biointerfaces 2019; 186:110719. [PMID: 31846893 DOI: 10.1016/j.colsurfb.2019.110719] [Citation(s) in RCA: 45] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2019] [Revised: 11/12/2019] [Accepted: 12/09/2019] [Indexed: 01/31/2023]
Abstract
The mussel inspired chemistry of dopamine leading to versatile coatings on the surface of all kinds of materials in a one pot process was considered as the unique aspect of catecholamine for a long time. Only recently, research has been undertaken to valorize the simultaneous oxidation and colloid formation in dopamine solutions in the presence of an oxidant. This mini review summarizes the synthesis methods allowing to get controlled nanomaterials, either nanoparticles, hollow capsules or nanotubes and even chiral nanomaterials from dopamine solutions. Finally the applications of those nanomaterials will be described.
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Affiliation(s)
- Salima El Yakhlifi
- Université de Strasbourg, Faculté de Chirurgie Dentaire, 8 Rue Sainte Elisabeth, 67000, Strasbourg, France; Institut National de la Santé et de la Recherche Médicale, Unité mixte de recherche 1121, 11 Rue Humann, 67085, Strasbourg Cedex, France
| | - Vincent Ball
- Université de Strasbourg, Faculté de Chirurgie Dentaire, 8 Rue Sainte Elisabeth, 67000, Strasbourg, France; Institut National de la Santé et de la Recherche Médicale, Unité mixte de recherche 1121, 11 Rue Humann, 67085, Strasbourg Cedex, France.
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31
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Park J, Moon H, Hong S. Recent advances in melanin-like nanomaterials in biomedical applications: a mini review. Biomater Res 2019; 23:24. [PMID: 31827881 PMCID: PMC6889561 DOI: 10.1186/s40824-019-0175-9] [Citation(s) in RCA: 34] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/03/2019] [Accepted: 11/25/2019] [Indexed: 12/17/2022] Open
Abstract
BACKGROUND Melanins are a group of biopigments in microorganisms that generate a wide range of colorants. Due to their multifunctionality, including ultraviolet protection, radical scavenging, and photothermal conversion, in addition to their intrinsic biocompatibility, natural melanins and synthetic melanin-like nanomaterials have been suggested as novel nano-bio platforms in biomedical applications. MAIN BODY Recent approaches in the synthesis of melanin-like nanomaterials and their biomedical applications have briefly been reviewed. Melanin-like nanomaterials have been suggested as endogenous chromophores for photoacoustic imaging and radical scavengers for the treatment of inflammatory diseases. The photothermal conversion ability of these materials under near-infrared irradiation allows hyperthermia-mediated cancer treatments, and their intrinsic fluorescence can be an indicator in biosensing applications. Furthermore, catechol-rich melanin and melanin-like nanomaterials possess a versatile affinity for various functional organic and inorganic additives, allowing the design of multifunctional hybrid nanomaterials that expand their range of applications in bioimaging, therapy, theranostics, and biosensing. CONCLUSION Melanin-like natural and synthetic nanomaterials have emerged; however, the under-elucidated chemical structures of these materials are still a major obstacle to the construction of novel nanomaterials through bottom-up approaches and tuning the material properties at the molecular level. Further advancements in melanin-based medical applications can be achieved with the incorporation of next-generation chemical and molecular analytical tools.
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Affiliation(s)
- Jihyo Park
- Department of Emerging Materials Science, DGIST, Daegu, 42988 South Korea
| | - Haeram Moon
- Department of Emerging Materials Science, DGIST, Daegu, 42988 South Korea
| | - Seonki Hong
- Department of Emerging Materials Science, DGIST, Daegu, 42988 South Korea
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32
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Li W, Wang Z, Xiao M, Miyoshi T, Yang X, Hu Z, Liu C, Chuang SSC, Shawkey MD, Gianneschi NC, Dhinojwala A. Mechanism of UVA Degradation of Synthetic Eumelanin. Biomacromolecules 2019; 20:4593-4601. [DOI: 10.1021/acs.biomac.9b01433] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
Affiliation(s)
- Weiyao Li
- Department of Polymer Science, The University of Akron, Akron, Ohio 44325, United States
| | - Zhao Wang
- Department of Chemistry & Biochemistry, University of California, San Diego, La Jolla, California 92093, United States
| | - Ming Xiao
- Department of Polymer Science, The University of Akron, Akron, Ohio 44325, United States
| | - Toshikazu Miyoshi
- Department of Polymer Science, The University of Akron, Akron, Ohio 44325, United States
| | - Xiaozhou Yang
- Department of Polymer Science, The University of Akron, Akron, Ohio 44325, United States
| | | | - Cheng Liu
- Department of Polymer Science, The University of Akron, Akron, Ohio 44325, United States
| | - Steven S. C. Chuang
- Department of Polymer Science, The University of Akron, Akron, Ohio 44325, United States
| | - Matthew D. Shawkey
- Department of Biology, Evolution and Optics of Nanostructures Group, University of Ghent, Ledeganckstraat 35, Ghent 9000, Belgium
| | - Nathan C. Gianneschi
- Department of Chemistry & Biochemistry, University of California, San Diego, La Jolla, California 92093, United States
| | - Ali Dhinojwala
- Department of Polymer Science, The University of Akron, Akron, Ohio 44325, United States
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33
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Träg J, Duchstein P, Hennemann M, Clark T, Guldi DM, Zahn D. Size-Dependent Local Ordering in Melanin Aggregates and Its Implication on Optical Properties. J Phys Chem A 2019; 123:9403-9412. [PMID: 31600441 DOI: 10.1021/acs.jpca.9b08722] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
We present atomic scale models of differently sized eumelanin nanoaggregates from molecular dynamics simulations combined with a simulated annealing procedure. The analysis reveals the formation of secondary structures due to π-stacking on one hand, but on the other hand a broad distribution of stack geometries in terms of stack size, horizontal displacement angles, and relative torsion angles. The displacement angle distribution, which is a measure of the occurrence of zigzag and linear stacking motives, respectively, strongly depends on the aggregate size-and is hence controlled by the interplay of surface and bulk energy terms. Semiempirical spectra calculations of small stacks (up to five protomolecules) reveal a strong dependence on the precise stack structure and allow for a direct structure-property correlation. The observed spectral shifts result in an overall spectral broadening and, hence, further support the geometric disorder model, which complements the chemical disorder model in the interpretation of eumelanin's monotonically increasing broad-band absorption.
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Affiliation(s)
- Johannes Träg
- Lehrstuhl für Theoretische Chemie/Computer Chemie Centrum Friedrich-Alexander Universität Erlangen-Nürnberg Nägelsbachstraße 25 , 91052 Erlangen , Germany.,Lehrstuhl für Physikalische Chemie 1 Friedrich-Alexander Universität Erlangen-Nürnberg Egerlandstraße 3 , 91058 Erlangen , Germany
| | - Patrick Duchstein
- Lehrstuhl für Theoretische Chemie/Computer Chemie Centrum Friedrich-Alexander Universität Erlangen-Nürnberg Nägelsbachstraße 25 , 91052 Erlangen , Germany
| | - Matthias Hennemann
- Lehrstuhl für Theoretische Chemie/Computer Chemie Centrum Friedrich-Alexander Universität Erlangen-Nürnberg Nägelsbachstraße 25 , 91052 Erlangen , Germany
| | - Timothy Clark
- Lehrstuhl für Theoretische Chemie/Computer Chemie Centrum Friedrich-Alexander Universität Erlangen-Nürnberg Nägelsbachstraße 25 , 91052 Erlangen , Germany
| | - Dirk M Guldi
- Lehrstuhl für Physikalische Chemie 1 Friedrich-Alexander Universität Erlangen-Nürnberg Egerlandstraße 3 , 91058 Erlangen , Germany
| | - Dirk Zahn
- Lehrstuhl für Theoretische Chemie/Computer Chemie Centrum Friedrich-Alexander Universität Erlangen-Nürnberg Nägelsbachstraße 25 , 91052 Erlangen , Germany
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34
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Tian Z, Hwang W, Kim YJ. Mechanistic understanding of monovalent cation transport in eumelanin pigments. J Mater Chem B 2019; 7:6355-6361. [PMID: 31465076 DOI: 10.1039/c9tb01211g] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Abstract
Recent research advances in charge-conducting materials have enabled the transformation of the naturally-occurring materials into crucial components in many technologies, including renewable energy storage devices or bioelectronics. Among various candidates, eumelanins are promising charge storage materials, exhibiting hybrid electronic ionic conductivity in a hydrated environment. The chemical and electrochemical properties of eumelanins are relatively well studied; however, the structure-property relationship is still elusive up to date. Herein, we reported the mesoscale structure of eumelanins and its impact on the charge transport. X-ray scattering suggests that eumelanin pigments exhibit the semi-crystalline structure with ordered d-spacings. These unique mesoscale structures further influence the charge transport mechanism with the cations of various sizes. Understanding the structures with consequent electrochemical properties suggest that eumelanins can further be tuned to serve as high-performance naturally-occurring charge storage materials.
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Affiliation(s)
- Zhen Tian
- Department of Chemical Engineering, University of New Hampshire, Durham, NH 03824, USA.
| | - Wonseok Hwang
- Department of Chemistry and Biochemistry, University of Maryland, College Park, College Park, MD 20740, USA
| | - Young Jo Kim
- Department of Chemical Engineering, University of New Hampshire, Durham, NH 03824, USA.
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35
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Turner MAP, Turner RJ, Horbury MD, Hine NDM, Stavros VG. Examining solvent effects on the ultrafast dynamics of catechol. J Chem Phys 2019; 151:084305. [PMID: 31470726 DOI: 10.1063/1.5116312] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Abstract
We consider the effect of a polar, hydrogen bond accepting, solvent environment on the excited state decay of catechol following excitation to its first excited singlet state (S1). A comparison of Fourier transform infrared spectroscopy and explicit-solvent ab initio frequency prediction suggests that 5 mM catechol in acetonitrile is both nonaggregated and in its "closed" conformation, contrary to what has been previously proposed. Using ultrafast transient absorption spectroscopy, we then demonstrate the effects of aggregation on the photoexcited S1 lifetime: at 5 mM catechol (nonaggregated) in acetonitrile, the S1 lifetime is 713 ps. In contrast at 75 mM catechol in acetonitrile, the S1 lifetime increases to 1700 ps. We attribute this difference to aggregation effects on the excited-state landscape. This work has shown that explicit-solvent methodology is key when calculating the vibrational frequencies of molecules in a strongly interacting solvent. Combining this with highly complementary steady-state and transient absorption spectroscopy enables us to gain key dynamical insights into how a prominent eumelanin building block behaves when in polar, hydrogen bond accepting solvents both as a monomer and as an aggregated species.
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Affiliation(s)
- M A P Turner
- Department of Physics, University of Warwick, Coventry, CV47AL, United Kingdom
| | - R J Turner
- Department of Chemistry, University of Warwick, Coventry, CV47AL, United Kingdom
| | - M D Horbury
- Department of Chemistry, University of Warwick, Coventry, CV47AL, United Kingdom
| | - N D M Hine
- Department of Physics, University of Warwick, Coventry, CV47AL, United Kingdom
| | - V G Stavros
- Department of Chemistry, University of Warwick, Coventry, CV47AL, United Kingdom
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36
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Harvey S, Raabe M, Ermakova A, Wu Y, Zapata T, Chen C, Lu H, Jelezko F, Ng DYW, Weil T. Transferrin‐Coated Nanodiamond–Drug Conjugates for Milliwatt Photothermal Applications. ADVANCED THERAPEUTICS 2019. [DOI: 10.1002/adtp.201900067] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Affiliation(s)
- Sean Harvey
- Max Planck Institute for Polymer Research Ackermannweg 10 55128 Mainz Germany
- Institute of Inorganic Chemistry IUlm University Albert‐Einstein‐Allee 11 89081 Ulm Germany
| | - Marco Raabe
- Max Planck Institute for Polymer Research Ackermannweg 10 55128 Mainz Germany
- Institute of Inorganic Chemistry IUlm University Albert‐Einstein‐Allee 11 89081 Ulm Germany
| | - Anna Ermakova
- Max Planck Institute for Polymer Research Ackermannweg 10 55128 Mainz Germany
| | - Yingke Wu
- Max Planck Institute for Polymer Research Ackermannweg 10 55128 Mainz Germany
| | - Todd Zapata
- Max Planck Institute for Polymer Research Ackermannweg 10 55128 Mainz Germany
| | - Chaojian Chen
- Max Planck Institute for Polymer Research Ackermannweg 10 55128 Mainz Germany
- Institute of Inorganic Chemistry IUlm University Albert‐Einstein‐Allee 11 89081 Ulm Germany
| | - Hao Lu
- Max Planck Institute for Polymer Research Ackermannweg 10 55128 Mainz Germany
| | - Fedor Jelezko
- Institute for Quantum OpticsUlm University Albert‐Einstein‐Allee 11 89081 Ulm Germany
| | - David Y. W. Ng
- Max Planck Institute for Polymer Research Ackermannweg 10 55128 Mainz Germany
| | - Tanja Weil
- Max Planck Institute for Polymer Research Ackermannweg 10 55128 Mainz Germany
- Institute of Inorganic Chemistry IUlm University Albert‐Einstein‐Allee 11 89081 Ulm Germany
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37
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Xiao M, Chen W, Li W, Zhao J, Hong YL, Nishiyama Y, Miyoshi T, Shawkey MD, Dhinojwala A. Elucidation of the hierarchical structure of natural eumelanins. J R Soc Interface 2019. [PMID: 29514988 DOI: 10.1098/rsif.2018.0045] [Citation(s) in RCA: 33] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
Eumelanin is one of the most ubiquitous pigments in living organisms and plays an important role in coloration and UV protection. Because eumelanin is highly cross-linked and insoluble in solvents, the chemical structure is still not completely known. In this study, we used atomic force microscopy, X-ray photoelectron spectroscopy and solid-state nuclear magnetic resonance (NMR) to compare intact eumelanosomes (pigment granules mostly made of eumelanin) from four phylogentically distant species: cuttlefish (Sepia officinalis) inks, black fish crow (Corvus ossifragus) feathers, iridescent wild turkey (Melleagris gallopavo) feathers and black human hair. We found that eumelanosomes from all four species are composed of subunit nanoparticles with a length of 10-60 nm, consistent with earlier observations in eumelanosomes from the sepia ink and human hair. The solid-state NMR results indicate the presence of quinone methide tautomers in all four eumelanins. We also found clear differences in the UV absorbance, the ratio of 5,6-dihydroxyindole-2-carboxylic acid/5,6-dihydroxyindole and protonated aryl carbon ratios in sepia eumelanin relative to the other three. This comparison of natural eumelanin across a phylogenetically broad group of organisms provides insights into the change in the eumelanin structure over the evolutionary history and enables the production of synthetic eumelanin with properties that are similar to natural eumelanin.
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Affiliation(s)
- Ming Xiao
- Department of Polymer Science, The University of Akron, Akron, OH 44325, USA
| | - Wei Chen
- State Key Lab of Pollution Control and Resource Reuse Study, College of Environmental Science and Engineering, Tongji University, Shanghai 200092, People's Republic of China
| | - Weiyao Li
- Department of Polymer Science, The University of Akron, Akron, OH 44325, USA
| | - Jiuzhou Zhao
- Department of Polymer Science, The University of Akron, Akron, OH 44325, USA
| | - You-Lee Hong
- Department of Polymer Science, The University of Akron, Akron, OH 44325, USA.,RIKEN CLST-JEOL Collaboration Center, RIKEN, Yokohama 230-0045, Japan
| | - Yusuke Nishiyama
- RIKEN CLST-JEOL Collaboration Center, RIKEN, Yokohama 230-0045, Japan.,JEOL RESONANCE Inc., Tokyo 196-8558, Japan
| | - Toshikazu Miyoshi
- Department of Polymer Science, The University of Akron, Akron, OH 44325, USA
| | - Matthew D Shawkey
- Evolution and Optics of Nanostructures Group, Department of Biology, University of Ghent, Ghent 9000, Belgium
| | - Ali Dhinojwala
- Department of Polymer Science, The University of Akron, Akron, OH 44325, USA
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38
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Lyu Q, Hsueh N, Chai CLL. Direct Evidence for the Critical Role of 5,6-Dihydroxyindole in Polydopamine Deposition and Aggregation. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2019; 35:5191-5201. [PMID: 30916980 DOI: 10.1021/acs.langmuir.9b00392] [Citation(s) in RCA: 22] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
The definitive role of the intermediate 5,6-dihydroxyindole (DHI) in the formation of polydopamine (PDA) coatings from aqueous dopamine (DA) has not been clearly elucidated and remains highly controversial. Our foray into this debate as reported in this study agrees with some reported assertions that DHI-based coatings are not synonymous with PDA coatings. Our conclusion arises from a systematic comparison of the components and properties of DHI-based coatings and PDA coatings. In addition, through careful copolymerization studies of DA and DHI, our studies reported herein unequivocally suggest that both DA and DHI are partial building blocks for PDA formation. Our results also provide additional evidence of the critical role of DHI in controlling the thickness of PDA coatings, through competitive events between PDA aggregation in solutions and deposition onto substrates. These findings highlight the complex interplay between both DHI and uncyclized DA moieties in the formation of adhesive catechol/amine materials.
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Affiliation(s)
- Qinghua Lyu
- Department of Pharmacy , National University of Singapore , 18 Science Drive 4 , Singapore 117543
| | - Nathanael Hsueh
- Department of Pharmacy , National University of Singapore , 18 Science Drive 4 , Singapore 117543
| | - Christina L L Chai
- Department of Pharmacy , National University of Singapore , 18 Science Drive 4 , Singapore 117543
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39
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Intermolecular association of some selected melanin monomers and their optical absorption. COMPUT THEOR CHEM 2019. [DOI: 10.1016/j.comptc.2019.02.001] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
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40
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Do thermal treatments influence the ultrafast opto-thermal processes of eumelanin? EUROPEAN BIOPHYSICS JOURNAL: EBJ 2019; 48:153-160. [DOI: 10.1007/s00249-018-1342-y] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/05/2018] [Revised: 09/12/2018] [Accepted: 12/10/2018] [Indexed: 10/27/2022]
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41
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Ghosh P, Ghosh D. Non-radiative decay of an eumelanin monomer: to be or not to be planar. Phys Chem Chem Phys 2019; 21:6635-6642. [DOI: 10.1039/c9cp00246d] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The planar and nonplanar non-radiative decay channels of eumelanin monomer.
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Affiliation(s)
- Paulami Ghosh
- School of Mathematical and Computational Sciences
- Indian Association for the Cultivation of Science
- Kolkata 700032
- India
| | - Debashree Ghosh
- School of Mathematical and Computational Sciences
- Indian Association for the Cultivation of Science
- Kolkata 700032
- India
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42
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Wang X, Chen Z, Yang P, Hu J, Wang Z, Li Y. Size control synthesis of melanin-like polydopamine nanoparticles by tuning radicals. Polym Chem 2019. [DOI: 10.1039/c9py00517j] [Citation(s) in RCA: 58] [Impact Index Per Article: 11.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
Abstract
We report the first effort to control the size of polydopamine nanoparticles via adding either strong free radical scavengers (i.e. edaravone) or stable free radicals (i.e. PTIO˙) during the polymerization.
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Affiliation(s)
- Xianheng Wang
- College of Polymer Science and Engineering
- State Key Laboratory of Polymer Materials Engineering
- Sichuan University
- Chengdu
- China
| | - Zhan Chen
- College of Polymer Science and Engineering
- State Key Laboratory of Polymer Materials Engineering
- Sichuan University
- Chengdu
- China
| | - Peng Yang
- College of Polymer Science and Engineering
- State Key Laboratory of Polymer Materials Engineering
- Sichuan University
- Chengdu
- China
| | - Junfei Hu
- College of Polymer Science and Engineering
- State Key Laboratory of Polymer Materials Engineering
- Sichuan University
- Chengdu
- China
| | - Zhao Wang
- Institute for Molecular Engineering
- University of Chicago
- Chicago
- USA
| | - Yiwen Li
- College of Polymer Science and Engineering
- State Key Laboratory of Polymer Materials Engineering
- Sichuan University
- Chengdu
- China
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43
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Ghosh P, Ghosh D. Effect of microsolvation on the non-radiative decay of the eumelanin monomer. Phys Chem Chem Phys 2019; 21:26123-26132. [DOI: 10.1039/c9cp05166j] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023]
Abstract
A plethora of various low energy accessible deactivation modes of DHI were explored.
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Affiliation(s)
- Paulami Ghosh
- School of Chemical Sciences
- Indian Association for the Cultivation of Science
- Kolkata 700032
- India
| | - Debashree Ghosh
- School of Chemical Sciences
- Indian Association for the Cultivation of Science
- Kolkata 700032
- India
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44
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Vahidzadeh E, Kalra AP, Shankar K. Melanin-based electronics: From proton conductors to photovoltaics and beyond. Biosens Bioelectron 2018; 122:127-139. [DOI: 10.1016/j.bios.2018.09.026] [Citation(s) in RCA: 36] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2018] [Revised: 09/05/2018] [Accepted: 09/06/2018] [Indexed: 01/04/2023]
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45
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Hong S, Wang Y, Park SY, Lee H. Progressive fuzzy cation-π assembly of biological catecholamines. SCIENCE ADVANCES 2018; 4:eaat7457. [PMID: 30202784 PMCID: PMC6128673 DOI: 10.1126/sciadv.aat7457] [Citation(s) in RCA: 140] [Impact Index Per Article: 23.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/30/2018] [Accepted: 07/30/2018] [Indexed: 05/21/2023]
Abstract
Biological functions depend on biomolecular assembly processes. Assemblies of lipid bilayers, actins, microtubules, or chromosomes are indispensable for cellular functions. These hierarchical assembly processes are reasonably predictable by understanding chemical structures of the defined building blocks and their interactions. However, biopigment assembly is rather fuzzy and unpredictable because a series of covalently coupled intermediates from catecholamine oxidation pathways progressively form a higher-level hierarchy. This study reports a different yet unexplored type of assembly process named "cation-π progressive assembly." We demonstrated for the first time that the cation-π is the primary mechanism for intermolecular assembly in dopamine-melanin biopigment. We also found that the self-assembled products physically grow and chemically gain new functions "progressively" over time in which cation-π plays important roles. The progressive assembly explains how biological systems produce wide spectra of pigment colors and broad wavelength absorption through energy-efficient processes. Furthermore, we also demonstrate surface-independent wettability control using cation-π progressive assembly.
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Affiliation(s)
- Seonki Hong
- Department of Emerging Materials Science, Daegu Gyeongbuk Institute of Science and Technology, 333 Techno Jungang-daero, Hyeonpung-myeon, Dalseong-gun, Daegu 42988, Republic of Korea
- Corresponding author. (H.L.); (S.H.)
| | - Younseon Wang
- Department of Chemistry, Korea Advanced Institute of Science and Technology, 291 Daehak-ro, Yuseong-gu, Daejeon 34141, Republic of Korea
| | - Sung Young Park
- Department of Chemical and Biological Engineering, Korea National University of Transportation, Chungju 380-702, Republic of Korea
| | - Haeshin Lee
- Department of Chemistry, Korea Advanced Institute of Science and Technology, 291 Daehak-ro, Yuseong-gu, Daejeon 34141, Republic of Korea
- Corresponding author. (H.L.); (S.H.)
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46
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Panzella L, Ebato A, Napolitano A, Koike K. The Late Stages of Melanogenesis: Exploring the Chemical Facets and the Application Opportunities. Int J Mol Sci 2018; 19:E1753. [PMID: 29899264 PMCID: PMC6032422 DOI: 10.3390/ijms19061753] [Citation(s) in RCA: 36] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/21/2018] [Revised: 06/08/2018] [Accepted: 06/08/2018] [Indexed: 11/16/2022] Open
Abstract
In the last decade, the late stages of melanin biosynthesis involving the oxidative polymerization of 5,6-dihydroxyindole (DHI) and 5,6-dihydroxyindole-2-carboxylic acid (DHICA) have been extensively investigated. Most of the information derived from a biomimetic approach in which the oxidation of melanogenic indoles was carried out under conditions mimicking those occurring in the biological environment. Characterization of the early oligomers allowed for drawing a structural picture of DHI and DHICA melanins, providing also an interpretative basis for the different properties exhibited by these pigments, e.g., the chromophore and the antioxidant ability. The improved knowledge has opened new perspectives toward the exploitation of the unique chemistry of melanins and its precursors in cosmetic and health care applications. A noticeable example is the development of an innovative hair dyeing system that is based on the marked ease of DHI to give rise to black melanin on air oxidation under slightly alkaline conditions. The advantage of this method for a step-wise coverage of gray hair with a natural shade pigmentation on repeated treatment with a DHI-based formulation with respect to traditional dyes is presented. A variant of DHICA melanin combining solubility in water-miscible organic solvents, an intense chromophore in the UltraViolet-A UV-A region, and a marked antioxidant potency was evaluated as an ingredient for cosmetic formulations.
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Affiliation(s)
- Lucia Panzella
- Department of Chemical Sciences, University of Naples "Federico II", I-80126 Naples, Italy.
| | - Atsuko Ebato
- Hair Care Products Research Laboratories, Kao Corporation, Tokyo 131-8501, Japan.
| | - Alessandra Napolitano
- Department of Chemical Sciences, University of Naples "Federico II", I-80126 Naples, Italy.
| | - Kenzo Koike
- Hair Care Products Research Laboratories, Kao Corporation, Tokyo 131-8501, Japan.
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Hiroto S. Innovative Synthesis and Functions of Curved π-Conjugated Molecules. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 2018. [DOI: 10.1246/bcsj.20170435] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
Affiliation(s)
- Satoru Hiroto
- Graduate School of Engineering, Nagoya University, Furo-cho, Chikusa-ku, Nagoya, Aichi 464-8603, Japan
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Alfieri ML, Micillo R, Panzella L, Crescenzi O, Oscurato SL, Maddalena P, Napolitano A, Ball V, d'Ischia M. Structural Basis of Polydopamine Film Formation: Probing 5,6-Dihydroxyindole-Based Eumelanin Type Units and the Porphyrin Issue. ACS APPLIED MATERIALS & INTERFACES 2018; 10:7670-7680. [PMID: 28937213 DOI: 10.1021/acsami.7b09662] [Citation(s) in RCA: 70] [Impact Index Per Article: 11.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Abstract
The role of 5,6-dihydroxyindole (DHI)-based oligomers, including porphyrin-like tetramers, in polydopamine (PDA) film formation was addressed by a comparative structural investigation against model polymers from DHI and its 2,7'-dimer. MALDI-MS data showed that (a) PDA is structurally different from DHI melanin and does not contain species compatible with DHI-based oligomers as primary building blocks; (b) PDA films and precipitate display a single main peak at m/ z 402 in common; (c) no species matching the range of m/ z values expected for cyclic porphyrin-type tetramers was detected in DHI melanin produced in the presence or in the absence of folic acid (FA) as templating agent, nor by oxidation of the 2,7'-dimer of DHI as putative precursor. 15N NMR resonances and Raman spectra predicted by extensive DFT calculations on porphyrin-type structures at various oxidation levels did not match spectral data for PDA or DHI melanin. Notably, unlike PDA, which gave structurally homogeneous films on quartz on atomic force microscopy (AFM) and micro-Raman spectroscopy, DHI melanin did not form any adhesive deposit after as long as 24 h. It is concluded that PDA film deposition involves structural components unrelated to DHI-based oligomers or porphyrin-type tetramers, which, on mechanism-based analysis, may arise by quinone-amine conjugation leading to polycyclic systems with extensive chain breakdown.
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Affiliation(s)
| | | | | | | | | | | | | | - Vincent Ball
- Université de Strasbourg , Faculté de Chirurgie Dentaire , 8 rue Sainte Elisabeth , 67000 Strasbourg , France
- Institut National de la Santé et de la Recherche Médicale , Unité Mixte de Recherche 1121, 11 rue Humann , 67085 Strasbourg Cedex , France
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Mondal S, Thampi A, Puranik M. Kinetics of Melanin Polymerization during Enzymatic and Nonenzymatic Oxidation. J Phys Chem B 2018; 122:2047-2063. [PMID: 29364665 DOI: 10.1021/acs.jpcb.7b07941] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Melanin is an abundant biopigment in the animal kingdom, but its structure remains poorly understood. This is a substantial impediment to understanding the mechanistic origin of its observed functions. Proposed models of melanin structure include aggregates of both linear and macrocyclic units and noncovalently held monomers. Both models are broadly in agreement with current experimental data. To constrain the structural and kinetic models of melanin, experimental data of high resolution with chemical specificity accompanied by atomistic modeling are required. We have addressed this by obtaining electronic absorption, infrared, and ultraviolet resonance Raman (RR) spectra of melanin at several wavelengths of excitation that are sensitive to small changes in structure. From these experiments, we observed kinetics of the formation of different species en route to melanin polymerization. Exclusive chemical signatures of monomer 3,4-dihydroxyphenylalanine (dopa), intermediate dopachrome (DC), and early-time polymer are established through their vibrational bands at 1292, 1670, and 1616 cm-1 respectively. Direct evidence of reduced heterogeneity of melanin oligomers in tyrosinase-induced formation is provided from experimental measurements of vibrational bandwidths. Models made with density functional theory show that the linear homopolymeric structures of 5,6-dihydroxyindole can account for experimentally observed wavenumbers and broad bandwidth in Raman spectra of dopa-melanin. We capture resonance Raman (RR) signature of DC, the intermediate stabilized by the enzyme tyrosinase, for the first time in an enzyme-assisted melanization reaction using 488 nm excitation wavelength and propose that this wavelength can be used to probe reaction intermediates of melanin formation in solution.
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Affiliation(s)
- Sayan Mondal
- Indian Institute of Science Education and Research , Pune 411008, India
| | - Arya Thampi
- Indian Institute of Science Education and Research , Pune 411008, India
| | - Mrinalini Puranik
- Indian Institute of Science Education and Research , Pune 411008, India
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Sakaeda T, Kobuchi S, Yoshioka R, Haruna M, Takahata N, Ito Y, Sugano A, Fukuzawa K, Hayase T, Hayakawa T, Nakayama H, Takaoka Y, Tohkin M. Susceptibility to serious skin and subcutaneous tissue disorders and skin tissue distribution of sodium-dependent glucose co-transporter type 2 (SGLT2) inhibitors. Int J Med Sci 2018; 15:937-943. [PMID: 30008607 PMCID: PMC6036094 DOI: 10.7150/ijms.22224] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 08/04/2017] [Accepted: 05/27/2018] [Indexed: 12/15/2022] Open
Abstract
Objectives: In Japan, sodium-glucose co-transporter type 2 (SGLT2) inhibitors have been reported to be associated with serious skin and subcutaneous tissue disorders. A post-marketing surveillance (PMS) study suggested that the association was specific for ipragliflozin and, to a lesser extent for dapagliflozin. These studies were performed to confirm the association of 6 SGLT2 inhibitors with serious skin disorders in a clinical setting, to elucidate the role of melanin in serious skin disorders and to understand the underlying mechanisms. Methods: The latest PMS records were retrieved from the Japanese Adverse Drug Event Report (JADER) database, and the associations were analyzed by data mining techniques. In silico 3-D docking simulation of SGLT2 inhibitors with melanin was performed using the MOE software. The skin tissue distribution of SGLT2 inhibitors was evaluated using albino rats after oral administration at clinical doses. Results: The adjusted reporting odds ratio (95% confidential limit) was 1.667 (1.415, 1.963) for ipragliflozin, 0.514 (0.317, 0.835) for dapagliflozin, 0.149 (0.048, 0.465) for tofogliflozin, 0.624 (0.331, 1.177) for luseogliflozin, 0.590 (0.277, 1.257) for canagliflozin and 0.293 (0.073, 1.187) for empagliflozin, when drugs other than the SGLT2 inhibitors were referred, and the association was detected only for ipragliflozin in clinical use. In silico 3-D docking simulation suggested the influence of melanin in ipragliflozin-specific serious skin disorders. The skin tissue-to-plasma concentration ratio of ipragliflozin was 0.45 ± 0.20 (±SD) at 1 hr after administration and increased in a time-dependent manner to 5.82 ± 3.66 at 24 hr (p<0.05), but not in case of other SGLT2 inhibitors. Conclusions: Serious skin disorders were suggested to be specific for ipragliflozin. Interaction with melanin might be implicated in ipragliflozin-specific serious skin disorders. Ipragliflozin was retained in the skin tissue, which suggested its interaction with the skin tissue in serious skin disorders.
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Affiliation(s)
- Toshiyuki Sakaeda
- Department of Pharmacokinetics, Kyoto Pharmaceutical University, Kyoto 607-8414, Japan
| | - Shinji Kobuchi
- Department of Pharmacokinetics, Kyoto Pharmaceutical University, Kyoto 607-8414, Japan
| | - Ryosuke Yoshioka
- Department of Pharmacokinetics, Kyoto Pharmaceutical University, Kyoto 607-8414, Japan
| | - Mariko Haruna
- Department of Pharmacokinetics, Kyoto Pharmaceutical University, Kyoto 607-8414, Japan
| | - Noriko Takahata
- Department of Pharmacokinetics, Kyoto Pharmaceutical University, Kyoto 607-8414, Japan
| | - Yukako Ito
- Department of Pharmacokinetics, Kyoto Pharmaceutical University, Kyoto 607-8414, Japan
| | - Aki Sugano
- Department of Medical Informatics and Bioinformatics, Kobe University Hospital, Kobe 650-0017, Japan
| | - Kazuki Fukuzawa
- Department of Regulatory Science, Nagoya City University Graduate School of Pharmaceutical Sciences, Nagoya 467-8603, Japan
| | - Toshiki Hayase
- Department of Regulatory Science, Nagoya City University Graduate School of Pharmaceutical Sciences, Nagoya 467-8603, Japan
| | - Taro Hayakawa
- Department of Hospital Pharmacy, Otsu City Hospital, Otsu 520-0804, Japan
| | - Hideo Nakayama
- Department of Hospital Pharmacy, Otsu City Hospital, Otsu 520-0804, Japan
| | - Yutaka Takaoka
- Department of Medical Informatics and Bioinformatics, Kobe University Hospital, Kobe 650-0017, Japan
| | - Masahiro Tohkin
- Department of Regulatory Science, Nagoya City University Graduate School of Pharmaceutical Sciences, Nagoya 467-8603, Japan
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