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Ramakrishna B, Sarma PVSRN, Ankati S, Bhuvanachandra B, Podile AR. Elicitation of defense response by transglycosylated chitooligosaccharides in rice seedlings. Carbohydr Res 2021; 510:108459. [PMID: 34700217 DOI: 10.1016/j.carres.2021.108459] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2021] [Revised: 10/05/2021] [Accepted: 10/06/2021] [Indexed: 12/31/2022]
Abstract
Long-chain chitooligosaccharides (COS) with degree of polymerization (DP) more than 4 are known to have potential biological activities. A hyper-transglycosylating mutant of an endo-chitinase from Serratia proteamaculans (SpChiD-Y28A) was used to synthesize COS with DP6 and DP7 using COS DP5 as substrate. Purified COS with DP5-7 were tested to elicit the defense response in rice seedlings. Among the COS used, DP7 strongly induced oxidative burst response as well as peroxidase, and phenylalanine ammonia lyase activites. A few selected marker genes in salicylic acid (SA)- and jasmonic acid-dependent pathways were evaluated by real-time PCR. The expression levels of pathogenesis-related (PR) genes PR1a and PR10 and defense response genes (chitinase1, peroxidase and β -1,3-glucanase) were up regulated upon COS treatment in rice seedlings. The DP7 induced Phenylalanine ammonia lyase and Isochorismate synthase 1 genes, with concomitant increase of Mitogen-activated protein kinase 6 and WRKY45 transcription factor genes indicated the possible role of phosphorylation in the transmission of a signal to induce SA-mediated defense response in rice.
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Affiliation(s)
- Bellamkonda Ramakrishna
- Department of Plant Sciences, School of Life Sciences, University of Hyderabad, Gachibowli, Hyderabad, 500046, Telangana, India
| | - P V S R N Sarma
- Department of Plant Sciences, School of Life Sciences, University of Hyderabad, Gachibowli, Hyderabad, 500046, Telangana, India
| | - Sravani Ankati
- Department of Plant Sciences, School of Life Sciences, University of Hyderabad, Gachibowli, Hyderabad, 500046, Telangana, India
| | - Bhoopal Bhuvanachandra
- Department of Plant Sciences, School of Life Sciences, University of Hyderabad, Gachibowli, Hyderabad, 500046, Telangana, India
| | - Appa Rao Podile
- Department of Plant Sciences, School of Life Sciences, University of Hyderabad, Gachibowli, Hyderabad, 500046, Telangana, India.
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Rousseau A, Armand S, Cottaz S, Fort S. Size-Controlled Synthesis of β(1→4)-GlcNAc Oligosaccharides Using an Endo-Glycosynthase. Chemistry 2021; 27:17637-17646. [PMID: 34633724 DOI: 10.1002/chem.202103212] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/03/2021] [Indexed: 11/11/2022]
Abstract
Chitin and peptidoglycan fragments are well recognized as pathogen associated molecular patterns (PAMPs). Long-chain oligosaccharides of β(1→4)-linked N-acetyl-D-glucosamine (GlcNAc) units indeed activate plants and mammals innate immune system. However, the mechanisms underlying PAMPs perception by lysine motif (LysM) domain receptors remain largely unknown because of insufficient availability of high-affinity molecular probes. Here, we report a two-enzyme cascade to synthesize long-chain β(1→4)-linked GlcNAc oligomers. Expression of the D52S mutant of hen egg-white lysozyme (HEWL) in Pichia pastoris at 52 mg L-1 provided a new glycosynthase catalyzing efficient polymerization of α-chitintriosyl fluoride. Selective N-deacetylation at the non-reducing unit of the glycosyl fluoride donor by Sinorhizobium meliloti NodB chitin-N-deacetylase abolished its ability to be polymerized by the glycosynthase but not to be transferred onto an acceptor. Using NodB and D52S HEWL in a one-pot cascade reaction allowed the synthesis on a milligram scale of chitin hexa-, hepta- and octasaccharides with yields up to 65 % and a perfect control over their size.
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Affiliation(s)
| | - Sylvie Armand
- CERMAV, Univ. Grenoble Alpes, CNRS, 38000, Grenoble, France
| | - Sylvain Cottaz
- CERMAV, Univ. Grenoble Alpes, CNRS, 38000, Grenoble, France
| | - Sébastien Fort
- CERMAV, Univ. Grenoble Alpes, CNRS, 38000, Grenoble, France
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3
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Nutritional Improvement of Bean Sprouts by Using Chitooligosaccharide as an Elicitor in Germination of Soybean (Glycine max L.). APPLIED SCIENCES-BASEL 2021. [DOI: 10.3390/app11167695] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Soybean sprouts are among the healthiest foods consumed in most Asian countries. Their nutritional content, especially bioactive compounds, may change according to the conditions of germination. The purpose of this study was to test the effect of chitooligosaccharide with different molecular weight and dosage on nutritional quality and enzymatic and antioxidant activities of soybean sprouts. The chitooligosaccharide elicitor strongly stimulated the accumulation of vitamin C, total phenolics, and total flavonoid. The stimulation effect was correlated with the molecular weight and concentration of chitooligosaccharide. With treatment of 0.01% of 1 kDa chitooligosaccharide, the nine phenolic constituents and six isoflavone compounds were significantly increased. The antioxidant capacity (DPPH radical and hydroxyl radical scavenging activity) and antioxidase activities (catalase and peroxidase) of soybean sprouts were also enhanced after treatment with chitooligosaccharide. The degree of chitooligosaccharide-induced elicitor activity increased as the molecular weight of chitooligosaccharide decreased. These results suggest that soaking soybean seeds in a solution of chitooligosaccharide, especially in 0.01% of 1 kDa chitooligosaccharide, may effectively improve the nutritional value and physiological function of soybean sprouts.
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Abe C, Zhang Y, Takao K, Sasaki K, Ochiai K, Matsui T. Visualization Analysis of Glyceollin Production in Germinating Soybeans by Matrix-Assisted Laser Desorption/Ionization Mass Spectrometric Imaging Technique. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2021; 69:7057-7063. [PMID: 34152141 DOI: 10.1021/acs.jafc.1c02261] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
Apart from the physiological functions of soybean phytoalexins, the production sites in soybeans remain unknown. In this study, the dynamic production of phytoalexins, glyceollins, in germinating soybeans inoculated with Aspergillus oryzae was visually investigated using matrix-assisted laser desorption/ionization mass spectrometry (MALDI-MS) imaging. During a 3-day sensitization using a fungus, glyceollins I-III were produced in germinating soybeans (from 0.03 mg/g for glyceollin III to 0.96 mg/g for glyceollin I). Imaging analysis provided visual evidence that glyceollins were produced only in the regions of seed coat and germinated root of the soybeans, while no production was observed in other regions, including the cotyledons. In contrast, their precursor, isoflavone, was distributed throughout the soybean. The evidence that the inoculation of the inactivated fungi also caused glyceollin production at the seed coat led us to speculate that glyceollins could be produced in the region of soybean attached to the fungus body.
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Affiliation(s)
- Chizumi Abe
- Department of Bioscience and Biotechnology, Faculty of Agriculture, Graduate School of Kyushu University, 744 Motooka, Nishi-ku, Fukuoka 819-0395, Japan
| | - Ye Zhang
- Department of Bioscience and Biotechnology, Faculty of Agriculture, Graduate School of Kyushu University, 744 Motooka, Nishi-ku, Fukuoka 819-0395, Japan
| | - Kazuhiro Takao
- Department of Bioscience and Biotechnology, Faculty of Agriculture, Graduate School of Kyushu University, 744 Motooka, Nishi-ku, Fukuoka 819-0395, Japan
| | - Kuni Sasaki
- DAIZ Inc., 3-14-3 Minami-kumamoto, Chuo-ku, Kumamoto 860-0812, Japan
| | - Koji Ochiai
- DAIZ Inc., 3-14-3 Minami-kumamoto, Chuo-ku, Kumamoto 860-0812, Japan
| | - Toshiro Matsui
- Department of Bioscience and Biotechnology, Faculty of Agriculture, Graduate School of Kyushu University, 744 Motooka, Nishi-ku, Fukuoka 819-0395, Japan
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Optimizing Chitin Depolymerization by Lysozyme to Long-Chain Oligosaccharides. Mar Drugs 2021; 19:md19060320. [PMID: 34072871 PMCID: PMC8229320 DOI: 10.3390/md19060320] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/18/2021] [Revised: 05/27/2021] [Accepted: 05/28/2021] [Indexed: 01/17/2023] Open
Abstract
Chitin oligosaccharides (COs) hold high promise as organic fertilizers in the ongoing agro-ecological transition. Short- and long-chain COs can contribute to the establishment of symbiotic associations between plants and microorganisms, facilitating the uptake of soil nutrients by host plants. Long-chain COs trigger plant innate immunity. A fine investigation of these different signaling pathways requires improving the access to high-purity COs. Here, we used the response surface methodology to optimize the production of COs by enzymatic hydrolysis of water-soluble chitin (WSC) with hen egg-white lysozyme. The influence of WSC concentration, its acetylation degree, and the reaction time course were modelled using a Box–Behnken design. Under optimized conditions, water-soluble COs up to the nonasaccharide were formed in 51% yield and purified to homogeneity. This straightforward approach opens new avenues to determine the complex roles of COs in plants.
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Aitouguinane M, Bouissil S, Mouhoub A, Rchid H, Fendri I, Abdelkafi S, Ould El-Hadj MD, Boual Z, Dubessay P, Gardarin C, Michaud P, El Alaoui-Talibi Z, El Modafar C, Pierre G, Delattre C. Induction of Natural Defenses in Tomato Seedlings by Using Alginate and Oligoalginates Derivatives Extracted from Moroccan Brown Algae. Mar Drugs 2020; 18:E521. [PMID: 33086600 PMCID: PMC7589842 DOI: 10.3390/md18100521] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/07/2020] [Revised: 10/13/2020] [Accepted: 10/14/2020] [Indexed: 12/26/2022] Open
Abstract
Polysaccharides extracted from marine algae have attracted much attention due to their biotechnological applications, including therapeutics, cosmetics, and mainly in agriculture and horticulture as biostimulants, biofertilizers, and stimulators of the natural defenses of plants. This study aimed to evaluate the ability of alginate isolated from Bifurcaria bifurcata from the Moroccan coast and oligoalginates derivatives to stimulate the natural defenses of tomato seedlings. Elicitation was carried out by the internodal injection of bioelicitor solutions. The elicitor capacities were evaluated by monitoring the activity of phenylalanine ammonia-lyase (PAL) as well as polyphenols content in the leaves located above the elicitation site for 5 days. Alginate and oligoalginates treatments triggered plant defense responses, which showed their capacity to significantly induce the PAL activity and phenolic compounds accumulation in the leaves of tomato seedlings. Elicitation by alginates and oligoalginates showed an intensive induction of PAL activity, increasing from 12 h of treatment and remaining at high levels throughout the period of treatment. The amount of polyphenols in the leaves was increased rapidly and strongly from 12 h of elicitation by both saccharide solutions, representing peaks value after 24 h of application. Oligoalginates exhibited an effective elicitor capacity in polyphenols accumulation compared to alginate polymers. The alginate and oligosaccharides derivatives revealed a similar elicitor capacity in PAL activity whereas the accumulation of phenolic compounds showed a differential effect. Polysaccharides extracted from the brown seaweed Bifurcaria bifurcate and oligosaccharides derivatives induced significantly the phenylpropanoid metabolism in tomato seedlings. These results contribute to the valorization of marine biomass as a potential bioresource for plant protection against phytopathogens in the context of eco-sustainable green technology.
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Affiliation(s)
- Meriem Aitouguinane
- Laboratoire Agrobiotechnologie et Bioingénierie, Faculté des Sciences et Techniques Guéliz, Université Cadi Ayyad, Marrakech 40000, Morocco; (M.A.); (S.B.); (A.M.); (Z.E.A.-T.); (C.E.M.)
- CNRS, SIGMA Clermont, Institut Pascal, Université Clermont Auvergne, F-63000 Clermont-Ferrand, France; (P.D.); (C.G.); (P.M.); (G.P.)
| | - Soukaina Bouissil
- Laboratoire Agrobiotechnologie et Bioingénierie, Faculté des Sciences et Techniques Guéliz, Université Cadi Ayyad, Marrakech 40000, Morocco; (M.A.); (S.B.); (A.M.); (Z.E.A.-T.); (C.E.M.)
- CNRS, SIGMA Clermont, Institut Pascal, Université Clermont Auvergne, F-63000 Clermont-Ferrand, France; (P.D.); (C.G.); (P.M.); (G.P.)
| | - Anouar Mouhoub
- Laboratoire Agrobiotechnologie et Bioingénierie, Faculté des Sciences et Techniques Guéliz, Université Cadi Ayyad, Marrakech 40000, Morocco; (M.A.); (S.B.); (A.M.); (Z.E.A.-T.); (C.E.M.)
| | - Halima Rchid
- Laboratoire de Biotechnologies et Valorisation des Ressources Végétales, Faculté des Sciences, Université Chouaib Doukkali, El Jadida 24000, Morocco;
| | - Imen Fendri
- Laboratoire de Biotechnologies des Plantes Appliquées à l’Amélioration des Plantes, Faculté des Sciences, Université de Sfax, Sfax 3038, Tunisia;
| | - Slim Abdelkafi
- Laboratoire de Génie Enzymatique et Microbiologie, Equipe de Biotechnologie des Algues, Ecole Nationale d’Ingénieurs de Sfax, Université de Sfax, Sfax 3038, Tunisia;
| | - Mohamed Didi Ould El-Hadj
- Laboratoire de Protection des Ecosystèmes en Zones arides et Semi-Arides, Ouargla Université, Université Kasdi Merbah, Ouargla 30000, Algeria; (M.D.O.E.-H.); (Z.B.)
| | - Zakaria Boual
- Laboratoire de Protection des Ecosystèmes en Zones arides et Semi-Arides, Ouargla Université, Université Kasdi Merbah, Ouargla 30000, Algeria; (M.D.O.E.-H.); (Z.B.)
| | - Pascal Dubessay
- CNRS, SIGMA Clermont, Institut Pascal, Université Clermont Auvergne, F-63000 Clermont-Ferrand, France; (P.D.); (C.G.); (P.M.); (G.P.)
| | - Christine Gardarin
- CNRS, SIGMA Clermont, Institut Pascal, Université Clermont Auvergne, F-63000 Clermont-Ferrand, France; (P.D.); (C.G.); (P.M.); (G.P.)
| | - Philippe Michaud
- CNRS, SIGMA Clermont, Institut Pascal, Université Clermont Auvergne, F-63000 Clermont-Ferrand, France; (P.D.); (C.G.); (P.M.); (G.P.)
| | - Zainab El Alaoui-Talibi
- Laboratoire Agrobiotechnologie et Bioingénierie, Faculté des Sciences et Techniques Guéliz, Université Cadi Ayyad, Marrakech 40000, Morocco; (M.A.); (S.B.); (A.M.); (Z.E.A.-T.); (C.E.M.)
| | - Cherkaoui El Modafar
- Laboratoire Agrobiotechnologie et Bioingénierie, Faculté des Sciences et Techniques Guéliz, Université Cadi Ayyad, Marrakech 40000, Morocco; (M.A.); (S.B.); (A.M.); (Z.E.A.-T.); (C.E.M.)
| | - Guillaume Pierre
- CNRS, SIGMA Clermont, Institut Pascal, Université Clermont Auvergne, F-63000 Clermont-Ferrand, France; (P.D.); (C.G.); (P.M.); (G.P.)
| | - Cédric Delattre
- CNRS, SIGMA Clermont, Institut Pascal, Université Clermont Auvergne, F-63000 Clermont-Ferrand, France; (P.D.); (C.G.); (P.M.); (G.P.)
- Institut Universitaire de France (IUF), 1 rue Descartes, 75005 Paris, France
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Narula K, Elagamey E, Abdellatef MAE, Sinha A, Ghosh S, Chakraborty N, Chakraborty S. Chitosan-triggered immunity to Fusarium in chickpea is associated with changes in the plant extracellular matrix architecture, stomatal closure and remodeling of the plant metabolome and proteome. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2020; 103:561-583. [PMID: 32170889 DOI: 10.1111/tpj.14750] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/18/2018] [Revised: 10/29/2019] [Accepted: 11/05/2019] [Indexed: 06/10/2023]
Abstract
Pathogen-/microbe-associated molecular patterns (PAMPs/MAMPs) initiate complex defense responses by reorganizing the biomolecular dynamics of the host cellular machinery. The extracellular matrix (ECM) acts as a physical scaffold that prevents recognition and entry of phytopathogens, while guard cells perceive and integrate signals metabolically. Although chitosan is a known MAMP implicated in plant defense, the precise mechanism of chitosan-triggered immunity (CTI) remains unknown. Here, we show how chitosan imparts immunity against fungal disease. Morpho-histological examination revealed stomatal closure accompanied by reductions in stomatal conductance and transpiration rate as early responses in chitosan-treated seedlings upon vascular fusariosis. Electron microscopy and Raman spectroscopy showed ECM fortification leading to oligosaccharide signaling, as documented by increased galactose, pectin and associated secondary metabolites. Multiomics approach using quantitative ECM proteomics and metabolomics identified 325 chitosan-triggered immune-responsive proteins (CTIRPs), notably novel ECM structural proteins, LYM2 and receptor-like kinases, and 65 chitosan-triggered immune-responsive metabolites (CTIRMs), including sugars, sugar alcohols, fatty alcohols, organic and amino acids. Identified proteins and metabolites are linked to reactive oxygen species (ROS) production, stomatal movement, root nodule development and root architecture coupled with oligosaccharide signaling that leads to Fusarium resistance. The cumulative data demonstrate that ROS, NO and eATP govern CTI, in addition to induction of PR proteins, CAZymes and PAL activities, besides accumulation of phenolic compounds downstream of CTI. The immune-related correlation network identified functional hubs in the CTI pathway. Altogether, these shifts led to the discovery of chitosan-responsive networks that cause significant ECM and guard cell remodeling, and translate ECM cues into cell fate decisions during fusariosis.
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Affiliation(s)
- Kanika Narula
- National Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi, 110067, India
| | - Eman Elagamey
- National Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi, 110067, India
- Plant Pathology Research Institute, Agricultural Research Center (ARC), 9 Gamaa St, Giza, 12619, Egypt
| | - Magdi A E Abdellatef
- National Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi, 110067, India
- Plant Pathology Research Institute, Agricultural Research Center (ARC), 9 Gamaa St, Giza, 12619, Egypt
| | - Arunima Sinha
- National Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi, 110067, India
| | - Sudip Ghosh
- National Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi, 110067, India
| | - Niranjan Chakraborty
- National Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi, 110067, India
| | - Subhra Chakraborty
- National Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi, 110067, India
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Elicitor and Receptor Molecules: Orchestrators of Plant Defense and Immunity. Int J Mol Sci 2020; 21:ijms21030963. [PMID: 32024003 PMCID: PMC7037962 DOI: 10.3390/ijms21030963] [Citation(s) in RCA: 128] [Impact Index Per Article: 32.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/26/2019] [Revised: 01/11/2020] [Accepted: 01/13/2020] [Indexed: 02/07/2023] Open
Abstract
Pathogen-associated molecular patterns (PAMPs), microbe-associated molecular patterns (MAMPs), herbivore-associated molecular patterns (HAMPs), and damage-associated molecular patterns (DAMPs) are molecules produced by microorganisms and insects in the event of infection, microbial priming, and insect predation. These molecules are then recognized by receptor molecules on or within the plant, which activates the defense signaling pathways, resulting in plant’s ability to overcome pathogenic invasion, induce systemic resistance, and protect against insect predation and damage. These small molecular motifs are conserved in all organisms. Fungi, bacteria, and insects have their own specific molecular patterns that induce defenses in plants. Most of the molecular patterns are either present as part of the pathogen’s structure or exudates (in bacteria and fungi), or insect saliva and honeydew. Since biotic stresses such as pathogens and insects can impair crop yield and production, understanding the interaction between these organisms and the host via the elicitor–receptor interaction is essential to equip us with the knowledge necessary to design durable resistance in plants. In addition, it is also important to look into the role played by beneficial microbes and synthetic elicitors in activating plants’ defense and protection against disease and predation. This review addresses receptors, elicitors, and the receptor–elicitor interactions where these components in fungi, bacteria, and insects will be elaborated, giving special emphasis to the molecules, responses, and mechanisms at play, variations between organisms where applicable, and applications and prospects.
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Feng F, Sun J, Radhakrishnan GV, Lee T, Bozsóki Z, Fort S, Gavrin A, Gysel K, Thygesen MB, Andersen KR, Radutoiu S, Stougaard J, Oldroyd GED. A combination of chitooligosaccharide and lipochitooligosaccharide recognition promotes arbuscular mycorrhizal associations in Medicago truncatula. Nat Commun 2019; 10:5047. [PMID: 31695035 PMCID: PMC6834629 DOI: 10.1038/s41467-019-12999-5] [Citation(s) in RCA: 94] [Impact Index Per Article: 18.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2019] [Accepted: 10/03/2019] [Indexed: 12/02/2022] Open
Abstract
Plants associate with beneficial arbuscular mycorrhizal fungi facilitating nutrient acquisition. Arbuscular mycorrhizal fungi produce chitooligosaccharides (COs) and lipo-chitooligosaccharides (LCOs), that promote symbiosis signalling with resultant oscillations in nuclear-associated calcium. The activation of symbiosis signalling must be balanced with activation of immunity signalling, which in fungal interactions is promoted by COs resulting from the chitinaceous fungal cell wall. Here we demonstrate that COs ranging from CO4-CO8 can induce symbiosis signalling in Medicago truncatula. CO perception is a function of the receptor-like kinases MtCERK1 and LYR4, that activate both immunity and symbiosis signalling. A combination of LCOs and COs act synergistically to enhance symbiosis signalling and suppress immunity signalling and receptors involved in both CO and LCO perception are necessary for mycorrhizal establishment. We conclude that LCOs, when present in a mix with COs, drive a symbiotic outcome and this mix of signals is essential for arbuscular mycorrhizal establishment.
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Affiliation(s)
- Feng Feng
- Sainsbury Laboratory, University of Cambridge, 47 Bateman Street, Cambridge, CB2 1LR, UK
| | - Jongho Sun
- Sainsbury Laboratory, University of Cambridge, 47 Bateman Street, Cambridge, CB2 1LR, UK
| | - Guru V Radhakrishnan
- Department of Cell and Developmental Biology, John Innes Centre, Norwich, NR4 7UH, UK
| | - Tak Lee
- Sainsbury Laboratory, University of Cambridge, 47 Bateman Street, Cambridge, CB2 1LR, UK
| | - Zoltán Bozsóki
- Department of Molecular Biology and Genetics, Aarhus University, Aarhus, 8000 C, Denmark
| | - Sébastien Fort
- Université de Grenoble Alpes, CNRS, CERMAV, 38000, Grenoble, France
| | - Aleksander Gavrin
- Sainsbury Laboratory, University of Cambridge, 47 Bateman Street, Cambridge, CB2 1LR, UK
| | - Kira Gysel
- Department of Molecular Biology and Genetics, Aarhus University, Aarhus, 8000 C, Denmark
| | - Mikkel B Thygesen
- Department of Chemistry, University of Copenhagen, Frederiksberg, 1871 C, Denmark
| | | | - Simona Radutoiu
- Department of Molecular Biology and Genetics, Aarhus University, Aarhus, 8000 C, Denmark
| | - Jens Stougaard
- Department of Molecular Biology and Genetics, Aarhus University, Aarhus, 8000 C, Denmark
| | - Giles E D Oldroyd
- Sainsbury Laboratory, University of Cambridge, 47 Bateman Street, Cambridge, CB2 1LR, UK.
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Cao J, Tan X. Comprehensive Analysis of the Chitinase Family Genes in Tomato ( Solanum lycopersicum). PLANTS 2019; 8:plants8030052. [PMID: 30823433 PMCID: PMC6473868 DOI: 10.3390/plants8030052] [Citation(s) in RCA: 20] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/26/2019] [Revised: 02/22/2019] [Accepted: 02/22/2019] [Indexed: 12/19/2022]
Abstract
Chitinase catalyzes the hydrolysis of chitin β-1,4 linkages. However, plants cannot produce chitin, suggesting that plant chitinases do not have the same function as animals. This study investigated the chitinase gene family in tomato and divided into eight groups via phylogenetic analyses with Arabidopsis and rice members. Conserved gene structures and motif arrangements indicated their functional relevance with each group. These genes were nonrandomly distributed across the tomato chromosomes, and tandem duplication contributed to the expansion of this gene family. Synteny analysis also established orthology relationships and functional linkages between Arabidopsis and tomato chitinase genes. Several positive selection sites were identified, which may contribute to the functional divergence of the protein family in evolution. In addition, differential expression profiles of the tomato chitinase genes were also investigated at some developmental stages, or under different biotic and abiotic stresses. Finally, functional network analysis found 124 physical or functional interactions, implying the diversity of physiological functions of the family proteins. These results provide a foundation for the exploration of the chitinase genes in plants and will offer some insights for further functional studies.
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Affiliation(s)
- Jun Cao
- Institute of Life Sciences, Jiangsu University, Xuefu Road 301, Zhenjiang 212013, China.
| | - Xiaona Tan
- Institute of Life Sciences, Jiangsu University, Xuefu Road 301, Zhenjiang 212013, China.
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Bömer M, O’Brien JA, Pérez-Salamó I, Krasauskas J, Finch P, Briones A, Daudi A, Souda P, Tsui TL, Whitelegge JP, Paul Bolwell G, Devoto A. COI1-dependent jasmonate signalling affects growth, metabolite production and cell wall protein composition in arabidopsis. ANNALS OF BOTANY 2018; 122:1117-1129. [PMID: 29924303 PMCID: PMC6324744 DOI: 10.1093/aob/mcy109] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/09/2018] [Accepted: 05/31/2018] [Indexed: 05/07/2023]
Abstract
BACKGROUND AND AIMS Cultured cell suspensions have been the preferred model to study the apoplast as well as to monitor metabolic and cell cycle-related changes. Previous work showed that methyl jasmonate (MeJA) inhibits leaf growth in a CORONATINE INSENSITIVE 1 (COI1)-dependent manner, with COI1 being the jasmonate (JA) receptor. Here, the effect of COI1 overexpression on the growth of stably transformed arabidopsis cell cultures is described. METHODS Time-course experiments were carried out to analyse gene expression, and protein and metabolite levels. KEY RESULTS Both MeJA treatment and the overexpression of COI1 modify growth, by altering cell proliferation and expansion. DNA content as well as transcript patterns of cell cycle and cell wall remodelling markers were altered. COI1 overexpression also increases the protein levels of OLIGOGALACTURONIDE OXIDASE 1, BETA-GLUCOSIDASE/ENDOGLUCANASES and POLYGALACTURONASE INHIBITING PROTEIN2, reinforcing the role of COI1 in mediating defence responses and highlighting a link between cell wall loosening and growth regulation. Moreover, changes in the levels of the primary metabolites alanine, serine and succinic acid of MeJA-treated Arabidopsis cell cultures were observed. In addition, COI1 overexpression positively affects the availability of metabolites such as β-alanine, threonic acid, putrescine, glucose and myo-inositol, thereby providing a connection between JA-inhibited growth and stress responses. CONCLUSIONS This study contributes to the understanding of the regulation of growth and the production of metabolic resources by JAs and COI1. This will have important implications in dissecting the complex relationships between hormonal and cell wall signalling in plants. The work also provides tools to uncover novel mechanisms co-ordinating cell division and post-mitotic cell expansion in the absence of organ developmental control.
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Affiliation(s)
- Moritz Bömer
- Plant Molecular Science and Centre of Systems and Synthetic Biology, School of Biological Sciences, Royal Holloway University of London, Egham, Surrey, UK
- Present address: Natural Resources Institute, University of Greenwich, Central Avenue, Chatham Maritime, Kent ME4 4TB, UK
| | - José A O’Brien
- Departamento de Genética Molecular y Microbiología, Departamento de Fruticultura y Enología, Pontificia Universidad Católica de Chile, Santiago, Chile
| | - Imma Pérez-Salamó
- Plant Molecular Science and Centre of Systems and Synthetic Biology, School of Biological Sciences, Royal Holloway University of London, Egham, Surrey, UK
| | - Jovaras Krasauskas
- Plant Molecular Science and Centre of Systems and Synthetic Biology, School of Biological Sciences, Royal Holloway University of London, Egham, Surrey, UK
| | - Paul Finch
- Plant Molecular Science and Centre of Systems and Synthetic Biology, School of Biological Sciences, Royal Holloway University of London, Egham, Surrey, UK
| | - Andrea Briones
- Plant Molecular Science and Centre of Systems and Synthetic Biology, School of Biological Sciences, Royal Holloway University of London, Egham, Surrey, UK
- Present address: Biometrology, National Physical Laboratory, Hampton Road, Teddington, Middlesex, TW11 0LW, UK
| | - Arsalan Daudi
- Plant Molecular Science and Centre of Systems and Synthetic Biology, School of Biological Sciences, Royal Holloway University of London, Egham, Surrey, UK
- Present address: Bio-Protocol LLC, PO Box 2073, Sunnyvale, CA 94087-0073, USA
| | - Puneet Souda
- Departamento de Genética Molecular y Microbiología, Departamento de Fruticultura y Enología, Pontificia Universidad Católica de Chile, Santiago, Chile
| | - Tjir-Li Tsui
- Plant Molecular Science and Centre of Systems and Synthetic Biology, School of Biological Sciences, Royal Holloway University of London, Egham, Surrey, UK
| | - Julian P Whitelegge
- Pasarow Mass Spectrometry Laboratory, Department of Psychiatry and Biobehavioral Sciences, David Geffen School of Medicine, University of California, Los Angeles, CA, USA
| | - G Paul Bolwell
- Plant Molecular Science and Centre of Systems and Synthetic Biology, School of Biological Sciences, Royal Holloway University of London, Egham, Surrey, UK
| | - Alessandra Devoto
- Plant Molecular Science and Centre of Systems and Synthetic Biology, School of Biological Sciences, Royal Holloway University of London, Egham, Surrey, UK
- For correspondence. E-mail
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Yarullina LG, Sorokan AV, Burkhanova GF, Cherepanova EA, Maksimov IV. Influence of Chitooligosaccharides with Different Acetylation Degrees on the H2O2 Content and the Activity of Pathogenesis-Related Proteins in Potato Plants Infected with Phytophthora infestans. APPL BIOCHEM MICRO+ 2018. [DOI: 10.1134/s0003683818050174] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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13
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Chalfoun NR, Durman SB, González-Montaner J, Reznikov S, De Lisi V, González V, Moretti ER, Devani MR, Ploper LD, Castagnaro AP, Welin B. Elicitor-Based Biostimulant PSP1 Protects Soybean Against Late Season Diseases in Field Trials. FRONTIERS IN PLANT SCIENCE 2018; 9:763. [PMID: 29946326 PMCID: PMC6006009 DOI: 10.3389/fpls.2018.00763] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/13/2017] [Accepted: 05/17/2018] [Indexed: 05/14/2023]
Abstract
Currently, fungicide application in soybean production accounts for an important amount of global pesticide use, and it is therefore most desirable to find new healthier and more environmental friendly alternatives for the phytosanitary management in this crop. In this study, we present convincing evidence for effective induction of disease protection by the agricultural biostimulant PSP1, a formulation based on the plant-defense eliciting activity of the fungal protease AsES (Acremonium strictum elicitor subtilisin), in multiple field trials in Argentina. PSP1 was shown to combine well with commercial spray adjuvants, an insecticide, a herbicide and fungicides used in Argentinian soybean production without losing any defense-inducing activity, indicating an easy and efficient adaptability to conventional soybean production and disease management in the region. Results from multiple soybean field trials conducted with different elite genotypes at several locations during two consecutive growing seasons, showed that PSP1 is able to induce an enhanced pathogen defense which effectively reduced late season disease (LSD) development in field-grown soybean. This defense response seems to be broad-range as disease development was clearly reduced for at least three different fungi causing LSDs in soybean (Septoria glycines, Cercospora kikuchii and Cercospora sojina). It was noteworthy that application of PSP1 in soybean alone gave a similar protection against fungal diseases as compared to the commercial fungicides included in the field trials and that PSP1 applied together with a fungicide at reproductive stages enhanced disease protection and significantly increased grain yields. PSP1 is the first example of an elicitor-based strategy in order to efficiently control multiple fungal diseases under field conditions in the soybean crop. These results show the feasibility of using induced resistance products as complements or even full-good replacements to currently used chemical pesticides, fulfilling a role as important components of a more sustainable crop disease management system.
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Affiliation(s)
- Nadia R. Chalfoun
- Instituto de Tecnología Agroindustrial del Noroeste Argentino – Consejo Nacional de Investigaciones Científicas y Técnicas–Estación Experimental Agroindustrial Obispo Colombres, Las Talitas, Argentina
| | - Sandra B. Durman
- Bayer S.A., Argentina – Crop Science LATAM 2, Crop Science Research, Buenos Aires, Argentina
| | - Jorge González-Montaner
- Asociación Argentina de Consorcios Regionales de Experimentación Agrícola, Buenos Aires, Argentina
| | - Sebastián Reznikov
- Estación Experimental Agroindustrial Obispo Colombres, Las Talitas, Argentina
| | - Vicente De Lisi
- Estación Experimental Agroindustrial Obispo Colombres, Las Talitas, Argentina
| | - Victoria González
- Estación Experimental Agroindustrial Obispo Colombres, Las Talitas, Argentina
| | | | - Mario R. Devani
- Instituto de Tecnología Agroindustrial del Noroeste Argentino – Consejo Nacional de Investigaciones Científicas y Técnicas–Estación Experimental Agroindustrial Obispo Colombres, Las Talitas, Argentina
- Estación Experimental Agroindustrial Obispo Colombres, Las Talitas, Argentina
| | - L. Daniel Ploper
- Instituto de Tecnología Agroindustrial del Noroeste Argentino – Consejo Nacional de Investigaciones Científicas y Técnicas–Estación Experimental Agroindustrial Obispo Colombres, Las Talitas, Argentina
- Estación Experimental Agroindustrial Obispo Colombres, Las Talitas, Argentina
| | - Atilio P. Castagnaro
- Instituto de Tecnología Agroindustrial del Noroeste Argentino – Consejo Nacional de Investigaciones Científicas y Técnicas–Estación Experimental Agroindustrial Obispo Colombres, Las Talitas, Argentina
- Estación Experimental Agroindustrial Obispo Colombres, Las Talitas, Argentina
| | - Björn Welin
- Instituto de Tecnología Agroindustrial del Noroeste Argentino – Consejo Nacional de Investigaciones Científicas y Técnicas–Estación Experimental Agroindustrial Obispo Colombres, Las Talitas, Argentina
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Zhang X, Li K, Xing R, Liu S, Chen X, Yang H, Li P. miRNA and mRNA Expression Profiles Reveal Insight into Chitosan-Mediated Regulation of Plant Growth. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2018; 66:3810-3822. [PMID: 29584426 DOI: 10.1021/acs.jafc.7b06081] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
Abstract
Chitosan has been numerously studied as a plant growth regulator and stress tolerance inducer. To investigate the roles of chitosan as bioregulator on plant and unravel its possible metabolic responses mechanisms, we simultaneously investigated mRNAs and microRNAs (miRNAs) expression profiles of wheat seedlings in response to chitosan heptamer. We found 400 chitosan-responsive differentially expressed genes, including 268 up-regulated and 132 down-regulated mRNAs, many of which were related to photosynthesis, primary carbon and nitrogen metabolism, defense responses, and transcription factors. Moreover, miRNAs also participate in chitosan-mediated regulation on plant growth. We identified 87 known and 21 novel miRNAs, among which 56 miRNAs were induced or repressed by chitosan heptamer, such as miRNA156, miRNA159a, miRNA164, miRNA171a, miRNA319, and miRNA1127. The integrative analysis of miRNA and mRNA expression profiles in this case provides fundamental information for further investigation of regulation mechanisms of chitosan on plant growth and will facilitate its application in agriculture.
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Affiliation(s)
- Xiaoqian Zhang
- Key Laborotory of Experimental Marine Biology , Institute of Oceanology, Chinese Academy of Sciences , Qingdao 266071 , China
- University of Chinese Academy of Sciences, Beijing 100049 , China
| | - Kecheng Li
- Key Laborotory of Experimental Marine Biology , Institute of Oceanology, Chinese Academy of Sciences , Qingdao 266071 , China
- Laboratory for Marine Drugs and Bioproducts , Qingdao National Laboratory for Marine Science and Technology , Qingdao 266237 , China
| | - Ronge Xing
- Key Laborotory of Experimental Marine Biology , Institute of Oceanology, Chinese Academy of Sciences , Qingdao 266071 , China
- Laboratory for Marine Drugs and Bioproducts , Qingdao National Laboratory for Marine Science and Technology , Qingdao 266237 , China
| | - Song Liu
- Key Laborotory of Experimental Marine Biology , Institute of Oceanology, Chinese Academy of Sciences , Qingdao 266071 , China
- Laboratory for Marine Drugs and Bioproducts , Qingdao National Laboratory for Marine Science and Technology , Qingdao 266237 , China
| | - Xiaolin Chen
- Key Laborotory of Experimental Marine Biology , Institute of Oceanology, Chinese Academy of Sciences , Qingdao 266071 , China
- Laboratory for Marine Drugs and Bioproducts , Qingdao National Laboratory for Marine Science and Technology , Qingdao 266237 , China
| | - Haoyue Yang
- Key Laborotory of Experimental Marine Biology , Institute of Oceanology, Chinese Academy of Sciences , Qingdao 266071 , China
- Laboratory for Marine Drugs and Bioproducts , Qingdao National Laboratory for Marine Science and Technology , Qingdao 266237 , China
| | - Pengcheng Li
- Key Laborotory of Experimental Marine Biology , Institute of Oceanology, Chinese Academy of Sciences , Qingdao 266071 , China
- Laboratory for Marine Drugs and Bioproducts , Qingdao National Laboratory for Marine Science and Technology , Qingdao 266237 , China
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Xu J, Wang G, Wang J, Li Y, Tian L, Wang X, Guo W. The lysin motif-containing proteins, Lyp1, Lyk7 and LysMe3, play important roles in chitin perception and defense against Verticillium dahliae in cotton. BMC PLANT BIOLOGY 2017; 17:148. [PMID: 28870172 PMCID: PMC5583995 DOI: 10.1186/s12870-017-1096-1] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/19/2016] [Accepted: 08/23/2017] [Indexed: 05/06/2023]
Abstract
BACKGROUND Lysin motif (LysM)-containing proteins are important pattern recognition receptors (PRRs) in plants, which function in the perception of microbe-associated molecular patterns (MAMPs) and in the defense against pathogenic attack. To date, the LysM genes have not been systematically analyzed in cotton or effectively utilized for disease resistance. RESULTS Here, we identified 29, 30, 60, and 56 LysM genes in the four sequenced cotton species, diploid Gossypium raimondii, diploid G. arboreum, tetraploid G. hirsutum acc. TM-1, and G. barbadense acc. 3-79, respectively. These LysM genes were classified into four groups with different structural characteristics and a variety of expression patterns in different organs and tissues when induced by chitin or Verticillium dahliae. We further characterized three genes, Lyp1, Lyk7 and LysMe3, which showed significant increase in expression in response to chitin signals, V. dahliae challenge and several stress-related signaling compounds. Lyp1, Lyk7 and LysMe3 proteins were localized to the plasma membrane, and silencing of their expression in cotton drastically impaired salicylic acid, jasmonic acid, and reactive oxygen species generation, impaired defense gene activation, and compromised resistance to V. dahliae. CONCLUSION Our results indicate that Lyp1, Lyk7, and LysMe3 are important PRRs that function in the recognition of chitin signals to activate the downstream defense processes and induce cotton defense mechanisms against V. dahliae.
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Affiliation(s)
- Jun Xu
- State Key Laboratory of Crop Genetics & Germplasm Enhancement, Nanjing Agricultural University, Nanjing, 210095 Jiangsu Province People’s Republic of China
| | - Guilin Wang
- State Key Laboratory of Crop Genetics & Germplasm Enhancement, Nanjing Agricultural University, Nanjing, 210095 Jiangsu Province People’s Republic of China
| | - Jing Wang
- State Key Laboratory of Crop Genetics & Germplasm Enhancement, Nanjing Agricultural University, Nanjing, 210095 Jiangsu Province People’s Republic of China
| | - Yongqing Li
- State Key Laboratory of Crop Genetics & Germplasm Enhancement, Nanjing Agricultural University, Nanjing, 210095 Jiangsu Province People’s Republic of China
| | - Liangliang Tian
- State Key Laboratory of Crop Genetics & Germplasm Enhancement, Nanjing Agricultural University, Nanjing, 210095 Jiangsu Province People’s Republic of China
| | - Xinyu Wang
- College of Life Sciences, Nanjing Agricultural University, Nanjing, 210095 Jiangsu Province People’s Republic of China
| | - Wangzhen Guo
- State Key Laboratory of Crop Genetics & Germplasm Enhancement, Nanjing Agricultural University, Nanjing, 210095 Jiangsu Province People’s Republic of China
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Cao Y, Halane MK, Gassmann W, Stacey G. The Role of Plant Innate Immunity in the Legume-Rhizobium Symbiosis. ANNUAL REVIEW OF PLANT BIOLOGY 2017; 68:535-561. [PMID: 28142283 DOI: 10.1146/annurev-arplant-042916-041030] [Citation(s) in RCA: 93] [Impact Index Per Article: 13.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/06/2023]
Abstract
A classic view of the evolution of mutualism is that it derives from a pathogenic relationship that attenuated over time to a situation in which both partners can benefit. If this is the case for rhizobia, then one might uncover features of the symbiosis that reflect this earlier pathogenic state. For example, as with plant pathogens, it is now generally assumed that rhizobia actively suppress the host immune response to allow infection and symbiosis establishment. Likewise, the host has retained mechanisms to control the nutrient supply to the symbionts and the number of nodules so that they do not become too burdensome. The open question is whether such events are strictly ancillary to the central symbiotic nodulation factor signaling pathway or are essential for rhizobial host infection. Subsequent to these early infection events, plant immune responses can also be induced inside nodules and likely play a role in, for example, nodule senescence. Thus, a balanced regulation of innate immunity is likely required throughout rhizobial infection, symbiotic establishment, and maintenance. In this review, we discuss the significance of plant immune responses in the regulation of symbiotic associations with rhizobia, as well as rhizobial evasion of the host immune system.
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Affiliation(s)
- Yangrong Cao
- State Key Laboratory of Agricultural Microbiology, College of Life Science and Technology, Huazhong Agricultural University, Wuhan 430070, China
| | - Morgan K Halane
- Division of Plant Sciences, C.S. Bond Life Sciences Center, and Interdisciplinary Plant Group, University of Missouri, Columbia, Missouri 65211
| | - Walter Gassmann
- Division of Plant Sciences, C.S. Bond Life Sciences Center, and Interdisciplinary Plant Group, University of Missouri, Columbia, Missouri 65211
| | - Gary Stacey
- Division of Plant Sciences, C.S. Bond Life Sciences Center, and Interdisciplinary Plant Group, University of Missouri, Columbia, Missouri 65211
- Division of Biochemistry, University of Missouri, Columbia, Missouri 65211;
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17
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Winkler AJ, Dominguez-Nuñez JA, Aranaz I, Poza-Carrión C, Ramonell K, Somerville S, Berrocal-Lobo M. Short-Chain Chitin Oligomers: Promoters of Plant Growth. Mar Drugs 2017; 15:md15020040. [PMID: 28212295 PMCID: PMC5334620 DOI: 10.3390/md15020040] [Citation(s) in RCA: 46] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2016] [Revised: 01/16/2017] [Accepted: 02/06/2017] [Indexed: 01/10/2023] Open
Abstract
Chitin is the second most abundant biopolymer in nature after cellulose, and it forms an integral part of insect exoskeletons, crustacean shells, krill and the cell walls of fungal spores, where it is present as a high-molecular-weight molecule. In this study, we showed that a chitin oligosaccharide of lower molecular weight (tetramer) induced genes in Arabidopsis that are principally related to vegetative growth, development and carbon and nitrogen metabolism. Based on plant responses to this chitin tetramer, a low-molecular-weight chitin mix (CHL) enriched to 92% with dimers (2mer), trimers (3mer) and tetramers (4mer) was produced for potential use in biotechnological processes. Compared with untreated plants, CHL-treated plants had increased in vitro fresh weight (10%), radicle length (25%) and total carbon and nitrogen content (6% and 8%, respectively). Our data show that low-molecular-weight forms of chitin might play a role in nature as bio-stimulators of plant growth, and they are also a known direct source of carbon and nitrogen for soil biomass. The biochemical properties of the CHL mix might make it useful as a non-contaminating bio-stimulant of plant growth and a soil restorer for greenhouses and fields.
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Affiliation(s)
- Alexander J Winkler
- Department of Systems and Natural Resources, MONTES (School of Forest Engineering and Natural Environment), Universidad Politécnica de Madrid, Ciudad Universitaria s/n, 28040 Madrid, Spain.
- Department for Wood Biology, Centre for Wood Science and Technology, Universität Hamburg, Leuschnerstr. 91d, D-2103 Hamburg, Germany.
| | - Jose Alfonso Dominguez-Nuñez
- Department of Systems and Natural Resources, MONTES (School of Forest Engineering and Natural Environment), Universidad Politécnica de Madrid, Ciudad Universitaria s/n, 28040 Madrid, Spain.
| | - Inmaculada Aranaz
- Departamento de Físico-Química, Instituto de Estudios Bifuncionales, Facultad de Farmacia, Universidad Complutense, Paseo Juan XXIII, 1, 28040 Madrid, Spain.
| | | | - Katrina Ramonell
- Department of Biological Sciences, P.O. Box 870344, University of Alabama, Tuscaloosa, AL 35487, USA.
| | - Shauna Somerville
- Plant Biology, Carnegie Institution of Science, 260 Panama St., Stanford, CA 94305, USA.
| | - Marta Berrocal-Lobo
- Department of Systems and Natural Resources, MONTES (School of Forest Engineering and Natural Environment), Universidad Politécnica de Madrid, Ciudad Universitaria s/n, 28040 Madrid, Spain.
- Centro de Biotecnología y Genómica de Plantas, Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA), Campus Montegancedo UPM, Universidad Politécnica de Madrid (UPM), 28223 Pozuelo de Alarcón (Madrid), Spain.
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18
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Wang X, Komatsu S. Plant subcellular proteomics: Application for exploring optimal cell function in soybean. J Proteomics 2016; 143:45-56. [PMID: 26808589 DOI: 10.1016/j.jprot.2016.01.011] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/29/2015] [Revised: 01/06/2016] [Accepted: 01/13/2016] [Indexed: 01/11/2023]
Abstract
UNLABELLED Plants have evolved complicated responses to developmental changes and stressful environmental conditions. Subcellular proteomics has the potential to elucidate localized cellular responses and investigate communications among subcellular compartments during plant development and in response to biotic and abiotic stresses. Soybean, which is a valuable legume crop rich in protein and vegetable oil, can grow in several climatic zones; however, the growth and yield of soybean are markedly decreased under stresses. To date, numerous proteomic studies have been performed in soybean to examine the specific protein profiles of cell wall, plasma membrane, nucleus, mitochondrion, chloroplast, and endoplasmic reticulum. In this review, methods for the purification and purity assessment of subcellular organelles from soybean are summarized. In addition, the findings from subcellular proteomic analyses of soybean during development and under stresses, particularly flooding stress, are presented and the proteins regulated among subcellular compartments are discussed. Continued advances in subcellular proteomics are expected to greatly contribute to the understanding of the responses and interactions that occur within and among subcellular compartments during development and under stressful environmental conditions. BIOLOGICAL SIGNIFICANCE Subcellular proteomics has the potential to investigate the cellular events and interactions among subcellular compartments in response to development and stresses in plants. Soybean could grow in several climatic zones; however, the growth and yield of soybean are markedly decreased under stresses. Numerous proteomics of cell wall, plasma membrane, nucleus, mitochondrion, chloroplast, and endoplasmic reticulum was carried out to investigate the respecting proteins and their functions in soybean during development or under stresses. In this review, methods of subcellular-organelle enrichment and purity assessment are summarized. In addition, previous findings of subcellular proteomics are presented, and functional proteins regulated among different subcellular are discussed. Subcellular proteomics contributes greatly to uncovering responses and interactions among subcellular compartments during development and under stressful environmental conditions in soybean.
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Affiliation(s)
- Xin Wang
- Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan; National Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan
| | - Setsuko Komatsu
- Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan; National Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan.
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Yin H, Du Y, Dong Z. Chitin Oligosaccharide and Chitosan Oligosaccharide: Two Similar but Different Plant Elicitors. FRONTIERS IN PLANT SCIENCE 2016; 7:522. [PMID: 27148339 PMCID: PMC4840203 DOI: 10.3389/fpls.2016.00522] [Citation(s) in RCA: 37] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/27/2015] [Accepted: 04/04/2016] [Indexed: 05/18/2023]
Affiliation(s)
- Heng Yin
- Department of Biotechnology, Dalian Institute of Chemical Physics, Chinese Academy of SciencesDalian, China
- *Correspondence: Heng Yin
| | - Yuguang Du
- Department of Biotechnology, Dalian Institute of Chemical Physics, Chinese Academy of SciencesDalian, China
- National Key Laboratory of Biochemical Engineering, Institute of Process Engineering, Chinese Academy of SciencesBeijing, China
- Yuguang Du
| | - Zhongmin Dong
- Department of Biology, Saint Mary's UniversityHalifax, NS, Canada
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Iriti M, Varoni EM. Chitosan-induced antiviral activity and innate immunity in plants. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2015; 22:2935-44. [PMID: 25226839 DOI: 10.1007/s11356-014-3571-7] [Citation(s) in RCA: 69] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/15/2014] [Accepted: 09/05/2014] [Indexed: 05/23/2023]
Abstract
Immunity represents a trait common to all living organisms, and animals and plants share some similarities. Therefore, in susceptible host plants, complex defence machinery may be stimulated by elicitors. Among these, chitosan deserves particular attention because of its proved efficacy. This survey deals with the antiviral activity of chitosan, focusing on its perception by the plant cell and mechanism of action. Emphasis has been paid to benefits and limitations of this strategy in crop protection, as well as to the potential of chitosan as a promising agent in virus disease control.
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Affiliation(s)
- Marcello Iriti
- Department of Agricultural and Environmental Sciences, Milan State University, Via G. Celoria 2, 20133, Milan, Italy,
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Tóth K, Stacey G. Does plant immunity play a critical role during initiation of the legume-rhizobium symbiosis? FRONTIERS IN PLANT SCIENCE 2015; 6:401. [PMID: 26082790 PMCID: PMC4451252 DOI: 10.3389/fpls.2015.00401] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/03/2015] [Accepted: 05/19/2015] [Indexed: 05/22/2023]
Abstract
Plants are exposed to many different microbes in their habitats. These microbes may be benign or pathogenic, but in some cases they are beneficial for the host. The rhizosphere provides an especially rich palette for colonization by beneficial (associative and symbiotic) microorganisms, which raises the question as to how roots can distinguish such 'friends' from possible 'foes' (i.e., pathogens). Plants possess an innate immune system that can recognize pathogens, through an arsenal of protein receptors, including receptor-like kinases (RLKs) and receptor-like proteins (RLPs) located at the plasma membrane. In addition, the plant host has intracellular receptors (so called NBS-LRR proteins or R proteins) that directly or indirectly recognize molecules released by microbes into the plant cell. A successful cooperation between legume plants and rhizobia leads to beneficial symbiotic interaction. The key rhizobial, symbiotic signaling molecules [lipo-chitooligosaccharide Nod factors (NF)] are perceived by the host legume plant using lysin motif-domain containing RLKs. Perception of the symbiotic NFs trigger signaling cascades leading to bacterial infection and accommodation of the symbiont in a newly formed root organ, the nodule, resulting in a nitrogen-fixing root nodule symbiosis. The net result of this symbiosis is the intracellular colonization of the plant with thousands of bacteria; a process that seems to occur in spite of the immune ability of plants to prevent pathogen infection. In this review, we discuss the potential of the invading rhizobial symbiont to actively avoid this innate immune response, as well as specific examples of where the plant immune response may modulate rhizobial infection and host range.
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Affiliation(s)
| | - Gary Stacey
- *Correspondence: Gary Stacey, Division of Plant Sciences and Biochemistry, Christopher S. Bond Life Sciences Center, National Center for Soybean Biotechnology, University of Missouri-Columbia, Columbia, MO 65211, USA
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Liang Y, Tóth K, Cao Y, Tanaka K, Espinoza C, Stacey G. Lipochitooligosaccharide recognition: an ancient story. THE NEW PHYTOLOGIST 2014; 204:289-96. [PMID: 25453133 DOI: 10.1111/nph.12898] [Citation(s) in RCA: 48] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/18/2023]
Abstract
Chitin is the second most abundant polysaccharide in nature, found in crustacean shells, insect exoskeletons and fungal cell walls. The action of chitin and chitin derivatives on plants has become a very interesting story of late. Chitin is a b1-4-linked polymer of N-acetyl-Dglucosamine(GlcNAc). In this unmodified form, chitooligosaccharides (degree of polymerization(dp) = 6–8)) are strong inducers of plant innate immunity. By contrast, when these chitooligosaccharides are acylated (so-called lipochitooligosaccharides, LCOs) and further modified, they can act as Nod factors, the key signaling molecules that play an important role in the initiation of the legume–rhizobium symbiosis. In a similar form, these molecules can also act as Myc factors, the key signaling molecules involved in the arbuscular mycorrhizal (AM)symbiosis. It has been proposed that Nod factor perception might have evolved from the more ancient AM symbiosis. Increasing evidence now suggests that LCO perception might have evolved from plant innate immunity signaling. In this review, we will discuss the evolutionary origin of symbiotic LCO recognition.
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Affiliation(s)
- Yan Liang
- Divisions of Plant Science and Biochemistry, National Center for Soybean Biotechnology, Christopher S. Bond Life Sciences Center, University of Missouri, Columbia, MO 65211, USA
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Dahmen JL, Yang Y, Greenlief CM, Stacey G, Hunt HK. Interfacing Whispering Gallery Mode Optical Microresonator Biosensors with the Plant Defense Elicitor Chitin. Colloids Surf B Biointerfaces 2014; 122:241-249. [DOI: 10.1016/j.colsurfb.2014.06.067] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/27/2014] [Revised: 06/25/2014] [Accepted: 06/30/2014] [Indexed: 01/06/2023]
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Yarullina LG, Kasimova RI, Akhatova AR. Activity of protective proteins in wheat plants treated with chitooligosaccharides with different degrees of acetylation and infection with Bipolaris sorokiniana. APPL BIOCHEM MICRO+ 2014. [DOI: 10.1134/s0003683814050135] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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A Review of the Applications of Chitin and Its Derivatives in Agriculture to Modify Plant-Microbial Interactions and Improve Crop Yields. AGRONOMY-BASEL 2013. [DOI: 10.3390/agronomy3040757] [Citation(s) in RCA: 136] [Impact Index Per Article: 12.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
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26
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Das SN, Madhuprakash J, Sarma PVSRN, Purushotham P, Suma K, Manjeet K, Rambabu S, Gueddari NEE, Moerschbacher BM, Podile AR. Biotechnological approaches for field applications of chitooligosaccharides (COS) to induce innate immunity in plants. Crit Rev Biotechnol 2013; 35:29-43. [PMID: 24020506 DOI: 10.3109/07388551.2013.798255] [Citation(s) in RCA: 77] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
Abstract
Plants have evolved mechanisms to recognize a wide range of pathogen-derived molecules and to express induced resistance against pathogen attack. Exploitation of induced resistance, by application of novel bioactive elicitors, is an attractive alternative for crop protection. Chitooligosaccharide (COS) elicitors, released during plant fungal interactions, induce plant defenses upon recognition. Detailed analyses of structure/function relationships of bioactive chitosans as well as recent progress towards understanding the mechanism of COS sensing in plants through the identification and characterization of their cognate receptors have generated fresh impetus for approaches that would induce innate immunity in plants. These progresses combined with the application of chitin/chitosan/COS in disease management are reviewed here. In considering the field application of COS, however, efficient and large-scale production of desired COS is a challenging task. The available methods, including chemical or enzymatic hydrolysis and chemical or biotechnological synthesis to produce COS, are also reviewed.
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Affiliation(s)
- Subha Narayan Das
- Department of Plant Sciences, School of Life Sciences, University of Hyderabad , Hyderabad , India and
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Rey T, Nars A, Bonhomme M, Bottin A, Huguet S, Balzergue S, Jardinaud MF, Bono JJ, Cullimore J, Dumas B, Gough C, Jacquet C. NFP, a LysM protein controlling Nod factor perception, also intervenes in Medicago truncatula resistance to pathogens. THE NEW PHYTOLOGIST 2013; 198:875-886. [PMID: 23432463 DOI: 10.1111/nph.12198] [Citation(s) in RCA: 91] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/21/2012] [Accepted: 01/17/2013] [Indexed: 05/03/2023]
Abstract
Plant LysM proteins control the perception of microbial-derived N-acetylglucosamine compounds for the establishment of symbiosis or activation of plant immunity. This raises questions about how plants, and notably legumes, can differentiate friends and foes using similar molecular actors and whether any receptors can intervene in both symbiosis and resistance. To study this question, nfp and lyk3 LysM-receptor like kinase mutants of Medicago truncatula that are affected in the early steps of nodulation, were analysed following inoculation with Aphanomyces euteiches, a root oomycete. The role of NFP in this interaction was further analysed by overexpression of NFP and by transcriptome analyses. nfp, but not lyk3, mutants were significantly more susceptible than wildtype plants to A. euteiches, whereas NFP overexpression increased resistance. Transcriptome analyses on A. euteiches inoculation showed that mutation in the NFP gene led to significant changes in the expression of c. 500 genes, notably involved in cell dynamic processes previously associated with resistance to pathogen penetration. nfp mutants also showed an increased susceptibility to the fungus Colletotrichum trifolii. These results demonstrate that NFP intervenes in M. truncatula immunity, suggesting an unsuspected role for NFP in the perception of pathogenic signals.
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Affiliation(s)
- Thomas Rey
- Université de Toulouse, UPS, UMR 5546, Laboratoire de Recherche en Sciences Végétales, BP42617, Auzeville, F-31326, Castanet-Tolosan, France
- CNRS, UMR 5546, Laboratoire de Recherche en Sciences Végétales, BP42617, Auzeville, F-31326, Castanet-Tolosan, France
| | - Amaury Nars
- Université de Toulouse, UPS, UMR 5546, Laboratoire de Recherche en Sciences Végétales, BP42617, Auzeville, F-31326, Castanet-Tolosan, France
- CNRS, UMR 5546, Laboratoire de Recherche en Sciences Végétales, BP42617, Auzeville, F-31326, Castanet-Tolosan, France
| | - Maxime Bonhomme
- Université de Toulouse, UPS, UMR 5546, Laboratoire de Recherche en Sciences Végétales, BP42617, Auzeville, F-31326, Castanet-Tolosan, France
- CNRS, UMR 5546, Laboratoire de Recherche en Sciences Végétales, BP42617, Auzeville, F-31326, Castanet-Tolosan, France
| | - Arnaud Bottin
- Université de Toulouse, UPS, UMR 5546, Laboratoire de Recherche en Sciences Végétales, BP42617, Auzeville, F-31326, Castanet-Tolosan, France
- CNRS, UMR 5546, Laboratoire de Recherche en Sciences Végétales, BP42617, Auzeville, F-31326, Castanet-Tolosan, France
| | - Stéphanie Huguet
- Unité de Recherche en Génomique Végétale (URGV), UMR INRA 1165, Université d'Evry Val d'Essonne, ERL CNRS 8196, CP 5708, F-91057, Evry Cedex, France
| | - Sandrine Balzergue
- Unité de Recherche en Génomique Végétale (URGV), UMR INRA 1165, Université d'Evry Val d'Essonne, ERL CNRS 8196, CP 5708, F-91057, Evry Cedex, France
| | - Marie-Françoise Jardinaud
- INRA, Laboratoire des Interactions Plantes-Microorganismes (LIPM), UMR441, F-31326, Castanet-Tolosan, France
| | - Jean-Jacques Bono
- INRA, Laboratoire des Interactions Plantes-Microorganismes (LIPM), UMR441, F-31326, Castanet-Tolosan, France
- CNRS, Laboratoire des Interactions Plantes-Microorganismes (LIPM), UMR2594, F-31326, Castanet-Tolosan, France
| | - Julie Cullimore
- INRA, Laboratoire des Interactions Plantes-Microorganismes (LIPM), UMR441, F-31326, Castanet-Tolosan, France
- CNRS, Laboratoire des Interactions Plantes-Microorganismes (LIPM), UMR2594, F-31326, Castanet-Tolosan, France
| | - Bernard Dumas
- Université de Toulouse, UPS, UMR 5546, Laboratoire de Recherche en Sciences Végétales, BP42617, Auzeville, F-31326, Castanet-Tolosan, France
- CNRS, UMR 5546, Laboratoire de Recherche en Sciences Végétales, BP42617, Auzeville, F-31326, Castanet-Tolosan, France
| | - Clare Gough
- INRA, Laboratoire des Interactions Plantes-Microorganismes (LIPM), UMR441, F-31326, Castanet-Tolosan, France
- CNRS, Laboratoire des Interactions Plantes-Microorganismes (LIPM), UMR2594, F-31326, Castanet-Tolosan, France
| | - Christophe Jacquet
- Université de Toulouse, UPS, UMR 5546, Laboratoire de Recherche en Sciences Végétales, BP42617, Auzeville, F-31326, Castanet-Tolosan, France
- CNRS, UMR 5546, Laboratoire de Recherche en Sciences Végétales, BP42617, Auzeville, F-31326, Castanet-Tolosan, France
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Nars A, Rey T, Lafitte C, Vergnes S, Amatya S, Jacquet C, Dumas B, Thibaudeau C, Heux L, Bottin A, Fliegmann J. An experimental system to study responses of Medicago truncatula roots to chitin oligomers of high degree of polymerization and other microbial elicitors. PLANT CELL REPORTS 2013; 32:489-502. [PMID: 23314495 DOI: 10.1007/s00299-012-1380-3] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/05/2012] [Revised: 12/06/2012] [Accepted: 12/12/2012] [Indexed: 05/18/2023]
Abstract
A fully acetylated, soluble CO preparation of mean DP of ca. 7 was perceived with high sensitivity by M. truncatula in a newly designed versatile root elicitation assay. The root system of legume plants interacts with a large variety of microorganisms, either pathogenic or symbiotic. Understanding how legumes recognize and respond specifically to pathogen-associated or symbiotic signals requires the development of standardized bioassays using well-defined preparations of the corresponding signals. Here we describe the preparation of chitin oligosaccharide (CO) fractions from commercial chitin and their characterization by a combination of liquid-state and solid-state nuclear magnetic resonance spectroscopy. We show that the CO fraction with highest degree of polymerization (DP) became essentially insoluble after lyophilization. However, a fully soluble, fully acetylated fraction with a mean DP of ca. 7 was recovered and validated by showing its CERK1-dependent activity in Arabidopsis thaliana. In parallel, we developed a versatile root elicitation bioassay in the model legume Medicago truncatula, using a hydroponic culture system and the Phytophthora β-glucan elicitor as a control elicitor. We then showed that M. truncatula responded with high sensitivity to the CO elicitor, which caused the production of extracellular reactive oxygen species and the transient induction of a variety of defense-associated genes. In addition, the bioassay allowed detection of elicitor activity in culture filtrates of the oomycete Aphanomyces euteiches, opening the way to the analysis of recognition of this important legume root pathogen by M. truncatula.
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Affiliation(s)
- A Nars
- Université de Toulouse, UPS, UMR5546, Laboratoire de Recherche en Sciences Végétales (LRSV), BP 42617, 31326, Castanet-Tolosan, France
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Gust AA, Willmann R, Desaki Y, Grabherr HM, Nürnberger T. Plant LysM proteins: modules mediating symbiosis and immunity. TRENDS IN PLANT SCIENCE 2012; 17:495-502. [PMID: 22578284 DOI: 10.1016/j.tplants.2012.04.003] [Citation(s) in RCA: 138] [Impact Index Per Article: 11.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/10/2012] [Revised: 04/05/2012] [Accepted: 04/11/2012] [Indexed: 05/18/2023]
Abstract
Microbial glycans, such as bacterial peptidoglycans, fungal chitin or rhizobacterial Nod factors (NFs), are important signatures for plant immune activation or for the establishment of beneficial symbioses. Plant lysin motif (LysM) domain proteins serve as modules mediating recognition of these different N-acetylglucosamine (GlcNAc)-containing ligands, suggesting that this class of proteins evolved from an ancient sensor for GlcNAc. During early plant evolution, these glycans probably served as immunogenic patterns activating LysM protein receptor-mediated plant immunity and stopping microbial infection. The biochemical potential of plant LysM proteins for sensing microbial GlcNAc-containing glycans has probably since favored the evolution of receptors facilitating microbial infection and symbiosis.
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Affiliation(s)
- Andrea A Gust
- Department of Plant Biochemistry, ZMBP, University of Tübingen, 72076 Tübingen, Germany.
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30
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Ligands of RLKs and RLPs Involved in Defense and Symbiosis. SIGNALING AND COMMUNICATION IN PLANTS 2012. [DOI: 10.1007/978-3-642-23044-8_10] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
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31
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Davydova VN, Nagorskaya VP, Gorbach VI, Kalitnik AA, Reunov AV, Solov’eva TF, Ermak IM. Chitosan antiviral activity: Dependence on structure and depolymerization method. APPL BIOCHEM MICRO+ 2011. [DOI: 10.1134/s0003683811010042] [Citation(s) in RCA: 54] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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32
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Hamel LP, Beaudoin N. Chitooligosaccharide sensing and downstream signaling: contrasted outcomes in pathogenic and beneficial plant-microbe interactions. PLANTA 2010; 232:787-806. [PMID: 20635098 DOI: 10.1007/s00425-010-1215-9] [Citation(s) in RCA: 73] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/09/2010] [Accepted: 06/14/2010] [Indexed: 05/29/2023]
Abstract
In plants, short chitin oligosaccharides and chitosan fragments (collectively referred to as chitooligosaccharides) are well-known elicitors that trigger defense gene expression, synthesis of antimicrobial compounds, and cell wall strengthening. Recent findings have shed new light on chitin-sensing mechanisms and downstream activation of intracellular signaling networks that mediate plant defense responses. Interestingly, chitin receptors possess several lysin motif domains that are also found in several legume Nod factor receptors. Nod factors are chitin-related molecules produced by nitrogen-fixing rhizobia to induce root nodulation. The fact that chitin and Nod factor receptors share structural similarity suggests an evolutionary conserved relationship between mechanisms enabling recognition of both deleterious and beneficial microorganisms. Here, we will present an update on molecular events involved in chitooligosaccharide sensing and downstream signaling pathways in plants and will discuss how structurally related signals may lead to such contrasted outcomes during plant-microbe interactions.
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Affiliation(s)
- Louis-Philippe Hamel
- Faculté des Sciences, Département de Biologie, Université de Sherbrooke, Sherbrooke, QC, Canada
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Morando M, Yao Y, Martín-Santamaría S, Zhu Z, Xu T, Cañada FJ, Zhang Y, Jiménez-Barbero J. Mimicking chitin: chemical synthesis, conformational analysis, and molecular recognition of the beta(1-->3) N-acetylchitopentaose analogue. Chemistry 2010; 16:4239-49. [PMID: 20229531 DOI: 10.1002/chem.200902860] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
Mimicking Nature by using synthetic molecules that resemble natural products may open avenues to key knowledge that is difficult to access by using substances from natural sources. In this context, a novel N-acetylchitooligosaccharide analogue, beta-1,3-N-acetamido-gluco-pentasaccharide, has been designed and synthesized by using aminoglucose as the starting material. A phthalic group has been employed as the protecting group of the amine moiety, whereas a thioalkyl was used as the leaving group on the reducing end. The conformational properties of this new molecule have been explored and compared to those of the its chito analogue, with the beta-1,3 linkages, by a combined NMR spectroscopic/molecular modeling approach. Furthermore, the study of its molecular recognition properties towards two proteins, a lectin (wheat germ agglutinin) and one enzyme (a chitinase) have also been performed by using NMR spectroscopy and docking protocols. There are subtle differences in the conformational behavior of the mimetic versus the natural chitooligosaccharide, whereas this mimetic is still recognized by these two proteins and can act as a moderate inhibitor of chitin hydrolysis.
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Affiliation(s)
- Maria Morando
- Chemical and Physical Biology, Centro de Investigacione, Biológicas, CSIC, Ramiro de Maeztu 9, 28040 Madrid, Spain
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Khoushab F, Yamabhai M. Chitin research revisited. Mar Drugs 2010; 8:1988-2012. [PMID: 20714419 PMCID: PMC2920538 DOI: 10.3390/md8071988] [Citation(s) in RCA: 216] [Impact Index Per Article: 15.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2010] [Revised: 05/24/2010] [Accepted: 05/08/2010] [Indexed: 12/22/2022] Open
Abstract
Two centuries after the discovery of chitin, it is widely accepted that this biopolymer is an important biomaterial in many aspects. Numerous studies on chitin have focused on its biomedical applications. In this review, various aspects of chitin research including sources, structure, biosynthesis, chitinolytic enzyme, chitin binding protein, genetic engineering approach to produce chitin, chitin and evolution, and a wide range of applications in bio- and nanotechnology will be dealt with.
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Affiliation(s)
- Feisal Khoushab
- School of Biotechnology, Suranaree University of Technology, Nakhon Ratchasima, 30000, Thailand; E-Mail:
| | - Montarop Yamabhai
- School of Biotechnology, Suranaree University of Technology, Nakhon Ratchasima, 30000, Thailand; E-Mail:
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Knepper C, Day B. From perception to activation: the molecular-genetic and biochemical landscape of disease resistance signaling in plants. THE ARABIDOPSIS BOOK 2010; 8:e012. [PMID: 22303251 PMCID: PMC3244959 DOI: 10.1199/tab.0124] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
More than 60 years ago, H.H. Flor proposed the "Gene-for-Gene" hypothesis, which described the genetic relationship between host plants and pathogens. In the decades that followed Flor's seminal work, our understanding of the plant-pathogen interaction has evolved into a sophisticated model, detailing the molecular genetic and biochemical processes that control host-range, disease resistance signaling and susceptibility. The interaction between plants and microbes is an intimate exchange of signals that has evolved for millennia, resulting in the modification and adaptation of pathogen virulence strategies and host recognition elements. In total, plants have evolved mechanisms to combat the ever-changing landscape of biotic interactions bombarding their environment, while in parallel, plant pathogens have co-evolved mechanisms to sense and adapt to these changes. On average, the typical plant is susceptible to attack by dozens of microbial pathogens, yet in most cases, remains resistant to many of these challenges. The sum of research in our field has revealed that these interactions are regulated by multiple layers of intimately linked signaling networks. As an evolved model of Flor's initial observations, the current paradigm in host-pathogen interactions is that pathogen effector molecules, in large part, drive the recognition, activation and subsequent physiological responses in plants that give rise to resistance and susceptibility. In this Chapter, we will discuss our current understanding of the association between plants and microbial pathogens, detailing the pressures placed on both host and microbe to either maintain disease resistance, or induce susceptibility and disease. From recognition to transcriptional reprogramming, we will review current data and literature that has advanced the classical model of the Gene-for-Gene hypothesis to our current understanding of basal and effector triggered immunity.
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Affiliation(s)
- Caleb Knepper
- Michigan State University. Program in Genetics. East Lansing, MI 48824. USA
- Michigan State University. Department of Energy Plant Research Laboratory. East Lansing, MI 48824. USA
| | - Brad Day
- Michigan State University. Program in Genetics. East Lansing, MI 48824. USA
- Michigan State University. Department of Plant Pathology. East Lansing, MI 48824. USA
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Kiselevsky DB, Kuznetsova YE, Vasil'ev LA, Lobysheva NV, Zinovkin RA, Nesov AV, Shestak AA, Samuilov VD. Effect of Ca2+ on programmed death of guard and epidermal cells of pea leaves. BIOCHEMISTRY. BIOKHIMIIA 2010; 75:614-22. [PMID: 20632941 DOI: 10.1134/s0006297910050111] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/16/2023]
Abstract
The effect of Ca2+ on programmed death of guard cells (GC) and epidermal cells (EC) determined from destruction of the cell nucleus was investigated in epidermis of pea leaves. Ca2+ at concentrations of 1-100 microM increased and at a concentration of 1 mM prevented the CN(-)-induced destruction of the nucleus in GC, disrupting the permeability barrier of GC plasma membrane for propidium iodide (PI). Ca2+ at concentrations of 0.1-1 mM enhanced drastically the number of EC nuclei stained by PI in epidermis treated with chitosan, an inducer of programmed cell death. The internucleosomal DNA fragmentation caused by CN(-) was suppressed by 2 mM Ca2+ on 6 h incubation, but fragmentation was stimulated on more prolonged treatment (16 h). Presumably, the disruption of the permeability barrier of plasma membrane for PI is not a sign of necrosis in plant cells. Quinacrine and diphenylene iodonium at 50 microM concentration prevented GC death induced by CN(-) or CN(-) + 0.1 mM Ca2+ but had no influence on respiration and photosynthetic O2 evolution in pea leaf slices. The generation of reactive oxygen species determined from 2',7'-dichlorofluorescein fluorescence was promoted by Ca2+ in epidermal peels from pea leaves.
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Affiliation(s)
- D B Kiselevsky
- Faculty of Biology, Lomonosov Moscow State University, Moscow, 119991, Russia
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Iizasa E, Mitsutomi M, Nagano Y. Direct binding of a plant LysM receptor-like kinase, LysM RLK1/CERK1, to chitin in vitro. J Biol Chem 2010; 285:2996-3004. [PMID: 19951949 PMCID: PMC2823440 DOI: 10.1074/jbc.m109.027540] [Citation(s) in RCA: 152] [Impact Index Per Article: 10.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/29/2009] [Revised: 11/19/2009] [Indexed: 11/06/2022] Open
Abstract
Plants induce immune responses against fungal pathogens by recognition of chitin, which is a component of the fungal cell wall. Recent studies have revealed that LysM receptor-like kinase 1/chitin elicitor receptor kinase 1 (LysM RLK1/CERK1) is a critical component for the immune responses to chitin in Arabidopsis thaliana. However, the molecular mechanism of the chitin recognition by LysM RLK1 still remains unknown. Here, we present the first evidence for direct binding of LysM RLK1 to chitin. We expressed LysM RLK1 fused with yeast-enhanced green fluorescent protein (LysM RLK1-yEGFP) in yeast cells. Binding studies using the solubilized LysM RLK1-yEGFP and several insoluble polysaccharides having similar structures showed that LysM RLK1-yEGFP specifically binds to chitin. Subsequently, the fluorescence microscopic observation of the solubilized LysM RLK1-yEGFP binding to chitin beads revealed that the binding was saturable and had a high affinity, with a K(d) of approximately 82 nm. This binding was competed by the addition of soluble glycol chitin or high concentration of chitin oligosaccharides having 4-8 residues of N-acetyl glucosamine. However, the competition of these chitin oligosaccharides is weaker than that of glycol chitin. These data suggest that LysM RLK1 has a higher affinity for chitin having a longer residue of N-acetyl glucosamine. We also found that LysM RLK1-yEGFP was autophosphorylated in vitro and that chitin does not affect the phosphorylation of LysM RLK1-yEGFP. Our results provide a new dimension to chitin elicitor perception in plants.
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Affiliation(s)
- Ei'ichi Iizasa
- From the Analytical Research Center for Experimental Sciences and
- the United Graduate School of Agricultural Sciences, Kagoshima University, Kagoshima 890-0065, Japan
| | - Masaru Mitsutomi
- the Department of Applied Biochemistry and Food Science, Saga University, 1 Honjo-machi, Saga 840-8502 and
- the United Graduate School of Agricultural Sciences, Kagoshima University, Kagoshima 890-0065, Japan
| | - Yukio Nagano
- From the Analytical Research Center for Experimental Sciences and
- the United Graduate School of Agricultural Sciences, Kagoshima University, Kagoshima 890-0065, Japan
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Silipo A, Erbs G, Shinya T, Dow JM, Parrilli M, Lanzetta R, Shibuya N, Newman MA, Molinaro A. Glyco-conjugates as elicitors or suppressors of plant innate immunity. Glycobiology 2009; 20:406-19. [DOI: 10.1093/glycob/cwp201] [Citation(s) in RCA: 141] [Impact Index Per Article: 9.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023] Open
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40
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Vasil'ev LA, Dzyubinskaya EV, Zinovkin RA, Kiselevsky DB, Lobysheva NV, Samuilov VD. Chitosan-induced programmed cell death in plants. BIOCHEMISTRY. BIOKHIMIIA 2009; 74:1035-43. [PMID: 19916915 DOI: 10.1134/s0006297909090120] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/16/2023]
Abstract
Chitosan, CN(-), or H(2)O(2) caused the death of epidermal cells (EC) in the epidermis of pea leaves that was detected by monitoring the destruction of cell nuclei; chitosan induced chromatin condensation and marginalization followed by the destruction of EC nuclei and subsequent internucleosomal DNA fragmentation. Chitosan did not affect stoma guard cells (GC). Anaerobic conditions prevented the chitosan-induced destruction of EC nuclei. The antioxidants nitroblue tetrazolium or mannitol suppressed the effects of chitosan, H(2)O(2), or chitosan + H(2)O(2) on EC. H(2)O(2) formation in EC and GC mitochondria that was determined from 2',7'-dichlorofluorescein fluorescence was inhibited by CN(-) and the protonophoric uncoupler carbonyl cyanide m-chlorophenylhydrazone but was stimulated by these agents in GC chloroplasts. The alternative oxidase inhibitors propyl gallate and salicylhydroxamate prevented chitosan- but not CN(-)-induced destruction of EC nuclei; the plasma membrane NADPH oxidase inhibitors diphenylene iodonium and quinacrine abolished chitosan- but not CN(-)-induced destruction of EC nuclei. The mitochondrial protein synthesis inhibitor lincomycin removed the destructive effect of chitosan or H(2)O(2) on EC nuclei. The effect of cycloheximide, an inhibitor of protein synthesis in the cytoplasm, was insignificant; however, it was enhanced if cycloheximide was added in combination with lincomycin. The autophagy inhibitor 3-methyladenine removed the chitosan effect but exerted no influence on the effect of H(2)O(2) as an inducer of EC death. The internucleosome DNA fragmentation in conjunction with the data on the 3-methyladenine effect provides evidence that chitosan induces programmed cell death that follows a combined scenario including apoptosis and autophagy. Based on the results of an inhibitor assay, chitosan-induced EC death involves reactive oxygen species generated by the NADPH oxidase of the plasma membrane.
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Affiliation(s)
- L A Vasil'ev
- Biological Faculty, Lomonosov Moscow State University, Moscow, 119991, Russia
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dos Santos ALW, El Gueddari NE, Trombotto S, Moerschbacher BM. Partially Acetylated Chitosan Oligo- and Polymers Induce an Oxidative Burst in Suspension Cultured Cells of the Gymnosperm Araucaria angustifolia. Biomacromolecules 2008; 9:3411-5. [DOI: 10.1021/bm801025g] [Citation(s) in RCA: 36] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- André Luis Wendt dos Santos
- Institute of Plant Biochemistry and Biotechnology, University of Muenster, D-48143 Muenster, Germany, and Laboratoire des Matériaux Polymères et des Biomatériaux, UMR CNRS 5223 Ingénierie des Matériaux Polymères, Université Claude Bernard Lyon 1, F-69622 Villeurbanne Cedex, France
| | - Nour Eddine El Gueddari
- Institute of Plant Biochemistry and Biotechnology, University of Muenster, D-48143 Muenster, Germany, and Laboratoire des Matériaux Polymères et des Biomatériaux, UMR CNRS 5223 Ingénierie des Matériaux Polymères, Université Claude Bernard Lyon 1, F-69622 Villeurbanne Cedex, France
| | - Stéphane Trombotto
- Institute of Plant Biochemistry and Biotechnology, University of Muenster, D-48143 Muenster, Germany, and Laboratoire des Matériaux Polymères et des Biomatériaux, UMR CNRS 5223 Ingénierie des Matériaux Polymères, Université Claude Bernard Lyon 1, F-69622 Villeurbanne Cedex, France
| | - Bruno Maria Moerschbacher
- Institute of Plant Biochemistry and Biotechnology, University of Muenster, D-48143 Muenster, Germany, and Laboratoire des Matériaux Polymères et des Biomatériaux, UMR CNRS 5223 Ingénierie des Matériaux Polymères, Université Claude Bernard Lyon 1, F-69622 Villeurbanne Cedex, France
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Wan J, Zhang XC, Stacey G. Chitin signaling and plant disease resistance. PLANT SIGNALING & BEHAVIOR 2008; 3:831-3. [PMID: 19704513 PMCID: PMC2634388 DOI: 10.4161/psb.3.10.5916] [Citation(s) in RCA: 78] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/14/2008] [Accepted: 03/17/2008] [Indexed: 05/18/2023]
Abstract
Chitin, a polymer of N-acetyl-D-glucosamine, is a component of the fungal cell wall and is not found in plants. Plant cells are equipped with chitin degrading enzymes to digest fungal cell walls and are capable of perceiving chitin fragments (chitooligosaccharides) released from fungal cell walls during fungal infection. Chitin recognition results in the activation of defense signaling pathways. Although chitin is a well recognized pathogen-associated molecular pattern (PAMP), little is known about the molecular mechanism of chitin signaling. Recent studies identified a number of critical components in the chitin-elicited signaling pathway including a potential receptor, MAPK cascade and transcription factor network. Interestingly, the chitin signaling pathway overlaps with the phytobacterial flagellin-and EF-Tu-elicited signaling pathways, suggesting that plant cells may perceive different PAMPs from various pathogens via specialized receptors and then utilize a conserved, common downstream pathway to mediate disease resistance. Given the fact that fungal pathogens are major problems in many agricultural systems, research on chitin signaling could have significance to sustainable agriculture and biofuel and biomaterial production.
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Affiliation(s)
- Jinrong Wan
- Division of Plant Sciences; University of Missouri-Columbia; Columbia, Missouri USA
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Wan J, Zhang XC, Neece D, Ramonell KM, Clough S, Kim SY, Stacey MG, Stacey G. A LysM receptor-like kinase plays a critical role in chitin signaling and fungal resistance in Arabidopsis. THE PLANT CELL 2008; 20:471-81. [PMID: 18263776 PMCID: PMC2276435 DOI: 10.1105/tpc.107.056754] [Citation(s) in RCA: 527] [Impact Index Per Article: 32.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/13/2007] [Revised: 01/10/2008] [Accepted: 01/21/2008] [Indexed: 05/18/2023]
Abstract
Chitin, a polymer of N-acetyl-d-glucosamine, is found in fungal cell walls but not in plants. Plant cells can perceive chitin fragments (chitooligosaccharides) leading to gene induction and defense responses. We identified a LysM receptor-like protein (LysM RLK1) required for chitin signaling in Arabidopsis thaliana. The mutation in this gene blocked the induction of almost all chitooligosaccharide-responsive genes and led to more susceptibility to fungal pathogens but had no effect on infection by a bacterial pathogen. Additionally, exogenously applied chitooligosaccharides enhanced resistance against both fungal and bacterial pathogens in the wild-type plants but not in the mutant. Together, our data indicate that LysM RLK1 is essential for chitin signaling in plants (likely as part of the receptor complex) and is involved in chitin-mediated plant innate immunity. The LysM RLK1-mediated chitin signaling pathway is unique, but it may share a conserved downstream pathway with the FLS2/flagellin- and EFR/EF-Tu-mediated signaling pathways. Additionally, our work suggests a possible evolutionary relationship between the chitin and Nod factor perception mechanisms due to the similarities between their potential receptors and between the signal molecules perceived by them.
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Affiliation(s)
- Jinrong Wan
- Division of Plant Sciences, National Center for Soybean Biotechnology, Christopher S. Bond Life Sciences Center, University of Missouri, Columbia, Missouri 65211, USA
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Libault M, Wan J, Czechowski T, Udvardi M, Stacey G. Identification of 118 Arabidopsis transcription factor and 30 ubiquitin-ligase genes responding to chitin, a plant-defense elicitor. MOLECULAR PLANT-MICROBE INTERACTIONS : MPMI 2007; 20:900-11. [PMID: 17722694 DOI: 10.1094/mpmi-20-8-0900] [Citation(s) in RCA: 163] [Impact Index Per Article: 9.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/16/2023]
Abstract
Chitin, found in the cell walls of true fungi and the exoskeleton of insects and nematodes, is a well-established elicitor of plant defense responses. In this study, we analyzed the expression patterns of Arabidopsis thaliana transcription factor (TF) and ubiquitin-ligase genes in response to purified chitooctaose at different treatment times (15, 30, 60, 90, and 120 min after treatment), using both quantitative polymerase chain reaction and the Affymetrix Arabidopsis whole-genome array. A total of 118 TF genes and 30 ubiquitin-ligase genes were responsive to the chitin treatment. Among these genes, members from the following four TF families were overrepresented: APETALA2/ethylene-reponsive element binding proteins (27), C2H2 zinc finger proteins (14), MYB domain-containing proteins (11), and WRKY domain transcription factors (14). Transcript variants from a few of these genes were found to respond differentially to chitin, suggesting transcript-specific regulation of these TF genes.
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Affiliation(s)
- Marc Libault
- National Center for Soybean Biotechnology, Division of Plant Science, Department of Molecular Microbiology and Immunology, Christopher S. Bond Life Sciences Center, University of Missouri, Columbia, MO 65211, USA.
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van't Slot KAE, Gierlich A, Knogge W. A single binding site mediates resistance- and disease-associated activities of the effector protein NIP1 from the barley pathogen Rhynchosporium secalis. PLANT PHYSIOLOGY 2007; 144:1654-66. [PMID: 17478637 PMCID: PMC1914146 DOI: 10.1104/pp.106.094912] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/15/2023]
Abstract
The effector protein NIP1 from the barley (Hordeum vulgare) pathogen Rhynchosporium secalis specifically induces the synthesis of defense-related proteins in cultivars of barley expressing the complementary resistance gene, Rrs1. In addition, it stimulates the activity of the barley plasma membrane H(+)-ATPase in a genotype-unspecific manner and it induces necrotic lesions in leaf tissues of barley and other cereal plant species. NIP1 variants type I and II, which display quantitative differences in their activities as elicitor and H(+)-ATPase stimulator, and the inactive mutant variants type III* and type IV*, were produced in Escherichia coli. Binding studies using (125)I-NIP1 type I revealed a single class of binding sites with identical binding characteristics in microsomes from near-isogenic resistant (Rrs1) and susceptible (rrs1) barley. Binding was specific, reversible, and saturable, and saturation ligand-binding experiments yielded a K(d) of 5.6 nm. A binding site was also found in rye (Secale cereale) and the nonhost species wheat (Triticum aestivum), oat (Avena sativa), and maize (Zea mays), but not in Arabidopsis (Arabidopsis thaliana). For NIP1 types I and II, equilibrium competition-binding experiments revealed a correlation between the difference in their affinities to the binding site and the differences in their elicitor activity and H(+)-ATPase stimulation, indicating a single target molecule to mediate both activities. In contrast, the inactive proteins type III* and type IV* are both characterized by high affinities similar to type I, suggesting that binding of NIP1 to this target is not sufficient for its activities.
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Affiliation(s)
- Klaas A E van't Slot
- Department of Stress and Developmental Biology, Leibniz Institute of Plant Biochemistry, D-06210 Halle, Germany
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Bussink AP, van Eijk M, Renkema GH, Aerts JM, Boot RG. The biology of the Gaucher cell: the cradle of human chitinases. ACTA ACUST UNITED AC 2007; 252:71-128. [PMID: 16984816 DOI: 10.1016/s0074-7696(06)52001-7] [Citation(s) in RCA: 71] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
Gaucher disease (GD) is the most common lysosomal storage disorder and is caused by inherited deficiencies of glucocerebrosidase, the enzyme responsible for the lysosomal breakdown of the lipid glucosylceramide. GD is characterized by the accumulation of pathological, lipid laden macrophages, so-called Gaucher cells. Following the development of enzyme replacement therapy for GD, the search for suitable surrogate disease markers resulted in the identification of a thousand-fold increased chitinase activity in plasma from symptomatic Gaucher patients and that decreases upon successful therapeutic intervention. Biochemical investigations identified a single enzyme, named chitotriosidase, to be responsible for this activity. Chitotriosidase was found to be an excellent marker for lipid laden macrophages in Gaucher patients and is now widely used to assist clinical management of patients. In the wake of the identification of chitotriosidase, the presence of other members of the chitinase family in mammals was discovered. Amongst these is AMCase, an enzyme recently implicated in the pathogenesis of asthma. Chitinases are omnipresent throughout nature and are also produced by vertebrates in which they play important roles in defence against chitin-containing pathogens and in food processing.
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Affiliation(s)
- Anton P Bussink
- Department of Medical Biochemistry, Academic Medical Center, University of Amsterdam, 1105 AZ Amsterdam, The Netherlands
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van den Burg HA, Harrison SJ, Joosten MHAJ, Vervoort J, de Wit PJGM. Cladosporium fulvum Avr4 protects fungal cell walls against hydrolysis by plant chitinases accumulating during infection. MOLECULAR PLANT-MICROBE INTERACTIONS : MPMI 2006; 19:1420-30. [PMID: 17153926 DOI: 10.1094/mpmi-19-1420] [Citation(s) in RCA: 150] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/12/2023]
Abstract
Resistance against the leaf mold fungus Cladosporium fulvum is mediated by the tomato Cf proteins which belong to the class of receptor-like proteins and indirectly recognize extracellular avirulence proteins (Avrs) of the fungus. Apart from triggering disease resistance, Avrs are believed to play a role in pathogenicity or virulence of C. fulvum. Here, we report on the avirulence protein Avr4, which is a chitin-binding lectin containing an invertebrate chitin-binding domain (CBM14). This domain is found in many eukaryotes, but has not yet been described in fungal or plant genomes. We found that interaction of Avr4 with chitin is specific, because it does not interact with other cell wall polysaccharides. Avr4 binds to chitin oligomers with a minimal length of three N-acetyl glucosamine residues. In vitro, Avr4 protects chitin against hydrolysis by plant chitinases. Avr4 also binds to chitin in cell walls of the fungi Trichoderma viride and Fusarium solani f. sp. phaseoli and protects these fungi against normally deleterious concentrations of plant chitinases. In situ fluorescence studies showed that Avr4 also binds to cell walls of C. fulvum during infection of tomato, where it most likely protects the fungus against tomato chitinases, suggesting that Avr4 is a counter-defensive virulence factor.
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Affiliation(s)
- Harrold A van den Burg
- Laboratory of Biochemistry, Wageningen University, Dreijenlaan 3, NL-6703 HA Wageningen, The Netherlands
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Aziz A, Trotel-Aziz P, Dhuicq L, Jeandet P, Couderchet M, Vernet G. Chitosan oligomers and copper sulfate induce grapevine defense reactions and resistance to gray mold and downy mildew. PHYTOPATHOLOGY 2006; 96:1188-94. [PMID: 18943955 DOI: 10.1094/phyto-96-1188] [Citation(s) in RCA: 103] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/20/2023]
Abstract
ABSTRACT Chitosan (CHN), a deacetylated derivative of chitin, was shown to be efficient in promoting plant defense reactions. CHN oligomers of different molecular weight (MW) and degree of acetylation (DA) triggered an accumulation of phytoalexins, trans- and cis-resveratrol and their derivatives epsilon-viniferin and piceid, in grapevine leaves. Highest phytoalexin production was achieved within 48 h of incubation with CHN at 200 mug/ml with an MW of 1,500 and a DA of 20% (CHN1.5/20), while oligomers with greater MW were less efficient, indicating that a specific MW threshold could be required for phytoalexin response. Treatment of grapevine leaves by highly active CHN1.5/20 also led to marked induction of chitinase and beta-1,3-glucanase activities. CHN1.5/20 applied together with copper sulfate (CuSO(4)) strongly induced phytoalexin accumulation. CuSO(4) alone, especially at low concentrations also elicited a substantial production of phytoalexins in grapevine leaves. Evidence is also provided that CHN1.5/20 significantly reduced the infection of grapevine leaves by Botrytis cinerea and Plasmopara viticola, and in combination with CuSO(4) conferred protection against both pathogens.
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Feng B, Chen Y, Zhao C, Zhao X, Bai X, Du Y. Isolation of a novel Ser/Thr protein kinase gene from oligochitosan-induced tobacco and its role in resistance against tobacco mosaic virus. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2006; 44:596-603. [PMID: 17071097 DOI: 10.1016/j.plaphy.2006.10.003] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/04/2006] [Accepted: 10/04/2006] [Indexed: 05/12/2023]
Abstract
Oligochitosan induces defense responses to pathogenic microbes in a wide variety of plants by acting as an elicitor. In the present study, mRNA differential display was used to investigate oligochitosan-induced transcriptional activation of defense-related genes. Accordingly, a novel Ser/Thr protein kinase gene was isolated and designated as oligochitosan-induced protein kinase (oipk). Molecular cloning showed that oipk contains six introns interrupted by seven exons. The open reading frame (ORF) of the gene is 1848 bp, which encodes a putative protein of 615 amino acids with the predicted molecular mass of 70.96 kDa and a pI of 6.32. A plant oipk antisense expression vector was constructed and transformed into tobacco by Agrobacterium tumefaciens. Decreased phenylalanine ammonia-lyase (PAL, EC 4.3.1.5) activity and decreased resistance to tobacco mosaic virus (TMV) were observed in transgenic tobacco. RT-PCR analysis revealed that oipk was expressed at high levels after oligochitosan induction in wild-type tobacco, but not in transgenic tobacco. These results indicated that oipk is involved in the signal pathway of oligochitosan-induced resistance in tobacco.
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Affiliation(s)
- B Feng
- Dalian Institute of Chemical Physics, Chinese Academy of Sciences, 457 Zhongshan Road, 116023 Dalian, China.
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50
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Kaku H, Nishizawa Y, Ishii-Minami N, Akimoto-Tomiyama C, Dohmae N, Takio K, Minami E, Shibuya N. Plant cells recognize chitin fragments for defense signaling through a plasma membrane receptor. Proc Natl Acad Sci U S A 2006; 103:11086-91. [PMID: 16829581 PMCID: PMC1636686 DOI: 10.1073/pnas.0508882103] [Citation(s) in RCA: 715] [Impact Index Per Article: 39.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2005] [Indexed: 11/18/2022] Open
Abstract
Chitin is a major component of fungal cell walls and serves as a molecular pattern for the recognition of potential pathogens in the innate immune systems of both plants and animals. In plants, chitin oligosaccharides have been known to induce various defense responses in a wide range of plant cells including both monocots and dicots. To clarify the molecular machinery involved in the perception and transduction of chitin oligosaccharide elicitor, a high-affinity binding protein for this elicitor was isolated from the plasma membrane of suspension-cultured rice cells. Characterization of the purified protein, CEBiP, as well as the cloning of the corresponding gene revealed that CEBiP is actually a glycoprotein consisting of 328 amino acid residues and glycan chains. CEBiP was predicted to have a short membrane spanning domain at the C terminus. Knockdown of CEBiP gene by RNA interference resulted in the suppression of the elicitor-induced oxidative burst as well as the gene responses, showing that CEBiP plays a key role in the perception and transduction of chitin oligosaccharide elicitor in the rice cells. Structural analysis of CEBiP also indicated the presence of two LysM motifs in the extracellular portion of CEBiP. As the LysM motif has been known to exist in the putative Nod-factor receptor kinases involved in the symbiotic signaling between leguminous plants and rhizobial bacteria, the result indicates the involvement of partially homologous plasma membrane proteins both in defense and symbiotic signaling in plant cells.
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Affiliation(s)
- Hanae Kaku
- Department of Biochemistry, National Institute of Agrobiological Sciences, 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan.
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