1
|
Sultana MS, Frazier TP, Millwood RJ, Lenaghan SC, Stewart CN. Development and validation of a novel and robust cell culture system in soybean (Glycine max (L.) Merr.) for promoter screening. PLANT CELL REPORTS 2019; 38:1329-1345. [PMID: 31396683 DOI: 10.1007/s00299-019-02455-5] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/06/2019] [Accepted: 07/29/2019] [Indexed: 05/23/2023]
Abstract
KEY MESSAGE A novel soybean cell culture was developed, establishing a reliable and rapid promoter assay to enable high-throughput automated screening in soybean protoplasts relevant to shoot tissues in whole plants. Transient reporter gene assays can be valuable to rapidly estimate expression characteristics of heterologous promoters. The challenge for maximizing the value of such screens is to combine relevant cells or tissues with methods that can be scaled for high-throughput screening, especially for crop-rather than model species. We developed a robust and novel soybean cell suspension culture derived from leaf-derived callus for protoplast production: a platform for promoter screening. The protoplasts were transfected with promoter-reporter constructs, of which were chosen and validated against known promoter expression profiles from tissue-derived protoplasts (leaves, stems, and immature cotyledons) and gene expression data from plants. The cell culture reliably produced 2.82 ± 0.94 × 108 protoplasts/g fresh culture mass with a transfection efficiency of 31.06 ± 7.69% at 48 h post-incubation. The promoter-reporter gene DNA expression levels of transfected cell culture-derived protoplasts were most similar to that of leaf- and stem-derived protoplasts (correlation coefficient of 0.99 and 0.96, respectively) harboring the same constructs. Cell culture expression was also significantly correlated to endogenous promoter-gene expression in leaf tissues as measured by qRT-PCR (correlation coefficient of 0.80). Using the manual protocols that produced these results, we performed early stage experiments to automate protoplast transformation on a robotic system. After optimizing the protocol, we achieved up to 29% transformation efficiency using our robotic system. We conclude that the soybean cell culture-to-protoplast transformation screen is amenable to automate promoter and gene screens in soybean that could be used to accelerate discoveries relevant for crop improvement. Key features of the system include low-cost, facile protoplast isolation, and transformation for soybean shoot tissue-relevant molecular screening.
Collapse
Affiliation(s)
- Mst Shamira Sultana
- Department of Plant Sciences, University of Tennessee, Knoxville, TN, USA
- Center for Agricultural Synthetic Biology, University of Tennessee Institute of Agriculture, Knoxville, TN, USA
| | - Taylor P Frazier
- Department of Plant Sciences, University of Tennessee, Knoxville, TN, USA
- Center for Agricultural Synthetic Biology, University of Tennessee Institute of Agriculture, Knoxville, TN, USA
- Elo Life Systems, Suite Number 2200, 3054 E Cornwallis Road, Durham, NC, 27709, USA
| | | | - Scott C Lenaghan
- Center for Agricultural Synthetic Biology, University of Tennessee Institute of Agriculture, Knoxville, TN, USA
- Department of Food Science, University of Tennessee, Knoxville, TN, USA
- Department of Mechanical, Aerospace, and Biomedical Engineering, University of Tennessee, Knoxville, TN, USA
| | - C Neal Stewart
- Department of Plant Sciences, University of Tennessee, Knoxville, TN, USA.
- Center for Agricultural Synthetic Biology, University of Tennessee Institute of Agriculture, Knoxville, TN, USA.
| |
Collapse
|
2
|
Abu Zahra H, Kuwamoto S, Uno T, Kanamaru K, Yamagata H. A cis-element responsible for cGMP in the promoter of the soybean chalcone synthase gene. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2014; 74:92-8. [PMID: 24286716 DOI: 10.1016/j.plaphy.2013.10.034] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/20/2013] [Accepted: 10/29/2013] [Indexed: 05/07/2023]
Abstract
The cyclic nucleotides cGMP and cAMP have been reported to play key roles in the regulation of plant processes and responses. We have previously reported that several genes encoding flavonoid biosynthetic enzymes, including chalcone synthase (CHS) in soybean (Glycine max L.), were induced by cGMP but not cAMP. The soybean genome contains nine CHS gene copies (GmCHS1-9). We investigated the responsiveness of several GmCHS genes to cGMP, cAMP, NO, and white light. Quantitative RT-PCR analysis showed that the transcript levels of GmCHS7 and GmCHS8 were increased by 3.6- and 3.8-fold, respectively, with cGMP whereas the transcript levels of GmCHS2 remained constant. Although cAMP had no effect on the transcript levels of the three genes, NO had an activation effect on all three. White light activated the three genes in a transient manner, with GmCHS2, GmCHS7, and GmCHS8 transcript levels increasing 3-fold after 3 h and decreasing to basal levels after 9 h. The GmCHS8 promoter contains several important cis-elements, including the G-box and H-box forming the Unit-I-like sequence and the MYB binding sequence, a target of the GmMYB176 transcription factor regulating the expression of GmCHS8. A transient gene expression assay revealed the activation of the Unit-I-like sequence, but not of the MYB binding sequence, by cGMP. The combination of G-box and H-box was necessary for cGMP responsiveness. Taken together, these results suggest that the Unit-I-like sequence in the promoters of GmCHS7 and GmCHS8 is a cGMP responsive cis-element in these genes and that NO exerts its effect via cis-elements other than the Unit-I-like sequence.
Collapse
Affiliation(s)
- Hamad Abu Zahra
- Laboratory of Biochemistry, Graduate School of Agricultural Science, Kobe University, Rokkodai-cho 1-1, Nada-ku, Kobe 657-8501, Japan
| | - Satoru Kuwamoto
- Laboratory of Biochemistry, Graduate School of Agricultural Science, Kobe University, Rokkodai-cho 1-1, Nada-ku, Kobe 657-8501, Japan
| | - Tomohide Uno
- Laboratory of Biochemistry, Graduate School of Agricultural Science, Kobe University, Rokkodai-cho 1-1, Nada-ku, Kobe 657-8501, Japan
| | - Kengo Kanamaru
- Laboratory of Biochemistry, Graduate School of Agricultural Science, Kobe University, Rokkodai-cho 1-1, Nada-ku, Kobe 657-8501, Japan
| | - Hiroshi Yamagata
- Laboratory of Biochemistry, Graduate School of Agricultural Science, Kobe University, Rokkodai-cho 1-1, Nada-ku, Kobe 657-8501, Japan.
| |
Collapse
|
3
|
Eprintsev AT, Fedorin DN, Igamberdiev AU. Ca²⁺ is involved in phytochrome A-dependent regulation of the succinate dehydrogenase gene sdh1-2 in Arabidopsis. JOURNAL OF PLANT PHYSIOLOGY 2013; 170:1349-1352. [PMID: 23711731 DOI: 10.1016/j.jplph.2013.04.006] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/14/2013] [Revised: 04/21/2013] [Accepted: 04/21/2013] [Indexed: 06/02/2023]
Abstract
The mechanism of transduction of the phytochrome signal regulating the expression of succinate dehydrogenase in Arabidopsis has been investigated. Using the phytochrome mutants of Arabidopsis, it is demonstrated that the inhibition of succinate dehydrogenase in the light may result from the phytochrome A-dependent modulation of Ca²⁺ amount in the nuclear fraction of leaves. This leads to the activation of expression of the gene pif3 encoding the phytochrome-interacting factor PIF3, which binds to the promoter of the gene sdh1-2 encoding the SDHA subunit of succinate dehydrogenase and suppresses its expression. It is concluded that Ca²⁺ ions are involved in the phytochrome A-mediated inhibition of succinate dehydrogenase activity in the light.
Collapse
Affiliation(s)
- Alexander T Eprintsev
- Department of Biochemistry and Cell Physiology, Voronezh State University, 394006 Voronezh, Russia
| | | | | |
Collapse
|
4
|
Zonin E, Moscatiello R, Miuzzo M, Cavallarin N, Di Paolo ML, Sandonà D, Marin O, Brini M, Negro A, Navazio L. TAT-mediated aequorin transduction: an alternative approach for effective calcium measurements in plant cells. PLANT & CELL PHYSIOLOGY 2011; 52:2225-35. [PMID: 22025557 DOI: 10.1093/pcp/pcr145] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/31/2023]
Abstract
Cell-penetrating peptides are short cationic peptides with the property of translocating across the plasma membrane and transferring macromolecules otherwise unable to permeate cell membranes. We investigated the potential ability of the protein transduction domain derived from amino acids 47-57 of the human immunodeficiency virus type 1 (HIV-1) TAT (transactivator of transcription) protein to be used as a nanocarrier for the delivery of aequorin, a Ca(2+)-sensitive photoprotein widely used as a reliable Ca(2+) reporter in cell populations. The TAT peptide, either covalently linked to apoaequorin or ionically bound to plasmids encoding differentially targeted aequorin, was supplied to plant suspension-cultured cells. The TAT-aequorin fusion protein was found to be rapidly and effectively translocated into plant cells. The chimeric molecule was internalized in fully active biological form and at levels suitable to monitor intracellular Ca(2+) concentrations. Plant cells incubated for just 5 min with TAT-aequorin responded to different environmental stimuli with the expected Ca(2+) signatures. On the other hand, TAT-mediated plasmid internalization did not provide the necessary level of transformation efficiency to allow calibration of luminescence signals into Ca(2+) concentration values. These results indicate that TAT-mediated aequorin transduction is a promising alternative to traditional plant transformation methods to monitor intracellular Ca(2+) dynamics rapidly and effectively in plant cells.
Collapse
Affiliation(s)
- Elisabetta Zonin
- Dipartimento di Biologia, Università di Padova, Via U. Bassi 58/B, 35131 Padova, Italy
| | | | | | | | | | | | | | | | | | | |
Collapse
|
5
|
Meunier CF, Rooke JC, Léonard A, Van Cutsem P, Su BL. Design of photochemical materials for carbohydrate production via the immobilisation of whole plant cells into a porous silica matrix. ACTA ACUST UNITED AC 2010. [DOI: 10.1039/b919763j] [Citation(s) in RCA: 33] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
|
6
|
Suita K, Kiryu T, Sawada M, Mitsui M, Nakagawa M, Kanamaru K, Yamagata H. Cyclic GMP acts as a common regulator for the transcriptional activation of the flavonoid biosynthetic pathway in soybean. PLANTA 2009; 229:403-13. [PMID: 18987879 DOI: 10.1007/s00425-008-0839-5] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/23/2008] [Accepted: 10/06/2008] [Indexed: 05/07/2023]
Abstract
Cyclic GMP (cGMP) is an important signaling molecule that controls a range of cellular functions. So far, however, only a few genes have been found to be regulated by cGMP in higher plants. We investigated the cGMP-responsiveness of several genes encoding flavonoid-biosynthetic enzymes in soybean (Glycine max L.) involved in legume-specific isoflavone, phytoalexin and anthocyanin biosynthesis, such as phenylalanine ammonia-lyase, cinnamate 4-hydroxylase, 4-coumarate:CoA ligase, chalcone synthase, chalcone reductase, chalcone isomerase, 2-hydroxyisoflavanone synthase, 2-hydroxyisoflavanone dehydratase, anthocyanidin synthase, UDP-glucose:isoflavone 7-O-glucosyltransferase, and isoflavone reductase, and found that the majority of these genes were induced by cGMP but not by cAMP. All cGMP-induced genes were also stimulated by sodium nitroprusside (SNP), a nitric oxide (NO) donor, and illumination of cultured cells with white light. The NO-dependent induction of these genes was blocked by 6-anilino-5,8-quinolinedione, an inhibitor of guanylyl cyclase. Moreover, cGMP levels in cultured cells were transiently increased by SNP. Consistent with the increases of these transcripts, the accumulation of anthocyanin in response to cGMP, NO, and white light was observed. The treatment of soybean cotyledons with SNP resulted in a high accumulation of isoflavones such as daidzein and genistein. Loss- and gain-of-function experiments with the promoter of chalcone reductase gene indicated the Unit I-independent activation of gene expression by cGMP. Together, these results suggest that cGMP acts as a second messenger to activate the expression of genes for enzymes involved in the flavonoid biosynthetic pathway in soybean.
Collapse
Affiliation(s)
- Kenji Suita
- Laboratory of Biochemistry, Graduate School of Agricultural Science, Kobe University, Rokkodai-cho 1-1, Nada-ku, Kobe, 657-8501, Japan
| | | | | | | | | | | | | |
Collapse
|
7
|
Navazio L, Moscatiello R, Genre A, Novero M, Baldan B, Bonfante P, Mariani P. A diffusible signal from arbuscular mycorrhizal fungi elicits a transient cytosolic calcium elevation in host plant cells. PLANT PHYSIOLOGY 2007; 144:673-81. [PMID: 17142489 PMCID: PMC1914206 DOI: 10.1104/pp.106.086959] [Citation(s) in RCA: 91] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/20/2006] [Accepted: 11/21/2006] [Indexed: 05/12/2023]
Abstract
The implication of calcium as intracellular messenger in the arbuscular mycorrhizal (AM) symbiosis has not yet been directly demonstrated, although often envisaged. We used soybean (Glycine max) cell cultures stably expressing the bioluminescent Ca(2+) indicator aequorin to detect intracellular Ca(2+) changes in response to the culture medium of spores of Gigaspora margarita germinating in the absence of the plant partner. Rapid and transient elevations in cytosolic free Ca(2+) were recorded, indicating that diffusible molecules released by the mycorrhizal fungus are perceived by host plant cells through a Ca(2+)-mediated signaling. Similar responses were also triggered by two Glomus isolates. The fungal molecules active in generating the Ca(2+) transient were constitutively released in the medium, and the induced Ca(2+) signature was not modified by the coculture of germinating spores with plant cells. Even ungerminated spores were able to generate the signaling molecules, as proven when the germination was blocked by a low temperature. The fungal molecules were found to be stable to heat treatment, of small molecular mass (<3 kD), and, on the basis of extraction with an organic solvent, partially lipophilic. Evidence for the specificity of such an early fungal signal to the AM symbiosis is suggested by the lack of a Ca(2+) response in cultured cells of the nonhost plant Arabidopsis (Arabidopsis thaliana) and by the up-regulation in soybean cells of genes related to Medicago truncatula DMI1, DMI2, and DMI3 and considered essential for the establishment of the AM symbiosis.
Collapse
Affiliation(s)
- Lorella Navazio
- Dipartimento di Biologia, Università di Padova, 35131 Padova, Italy.
| | | | | | | | | | | | | |
Collapse
|
8
|
Santi L, Huang Z, Mason H. Virus-like particles production in green plants. Methods 2007; 40:66-76. [PMID: 16997715 PMCID: PMC2677071 DOI: 10.1016/j.ymeth.2006.05.020] [Citation(s) in RCA: 63] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/02/2005] [Accepted: 05/03/2006] [Indexed: 12/13/2022] Open
Abstract
Viruses-like particles (VLPs), assembled from capsid structural subunits of several different viruses, have found a number of biomedical applications such as vaccines and novel delivery systems for nucleic acids and small molecules. Production of recombinant proteins in different plant systems has been intensely investigated and improved upon in the last two decades. Plant-derived antibodies, vaccines, and microbicides have received great attention and shown immense promise. In the case of mucosal vaccines, orally delivered plant-produced VLPs require minimal processing of the plant tissue, thus offering an inexpensive and safe alternative to more conventional live attenuated and killed virus vaccines. For other applications which require higher level of purification, recent progress in expression levels using plant viral vectors have shown that plants can compete with traditional fermentation systems. In this review, the different methods used in the production of VLPs in green plants are described. Specific examples of expression, assembly, and immunogenicity of several plant-derived VLPs are presented.
Collapse
Affiliation(s)
- Luca Santi
- Biodesign Institute at Arizona State University, Tempe, 852878-5401, USA
| | | | | |
Collapse
|
9
|
Nishiyama Y, Takechi K, Nanjo Y, Murata N, Hayashi H. Acclimation of photosystem II to high temperature in a suspension culture of soybean (Glycine max) cells requires proteins that are associated with the thylakoid membrane. PHOTOSYNTHESIS RESEARCH 2006; 90:223-32. [PMID: 17286189 DOI: 10.1007/s11120-007-9138-4] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/26/2006] [Accepted: 01/15/2007] [Indexed: 05/13/2023]
Abstract
In a study of the responses of photosystem II (PSII) to high temperature in suspension-cultured cells of soybean (Glycine max L. Merr.), we found that high temperatures inactivated PSII via two distinct pathways. Inactivation of PSII by moderately high temperatures, such as 41 degrees C, was reversed upon transfer of cells to 25 degrees C. The recovery of PSII required light, but not the synthesis of proteins de novo. By contrast, temperatures higher than 45 degrees C inactivated PSII irreversibly. An increase in the growth temperature from 25 to 35 degrees C resulted in an upward shift of 3 degrees C in the profile of the heat-induced inactivation of PSII, which indicated that the thermal stability of PSII had been enhanced. This acclimative response was reflected by the properties of isolated thylakoid membranes: PSII in thylakoid membranes from cells that had been grown at 35 degrees C exhibited greater thermal stability than that from cells grown at 25 degrees C. Disruption of the vesicular structure of thylakoid membranes with 0.05% Triton X-100 decreased the thermal stability of PSII to a similar level in both types of thylakoid membrane. Proteins released by Triton X-100 from thylakoid membranes from cells grown at 35 degrees C were able to increase the thermal stability of Triton-treated thylakoid membranes. These observations suggest that proteins that are associated with thylakoid membranes might be involved in the enhancement of the thermal stability of PSII.
Collapse
Affiliation(s)
- Yoshitaka Nishiyama
- Cell-Free Science and Technology Research Center, Ehime University, Bunkyo-cho, Matsuyama, Ehime, 790-8577, Japan.
| | | | | | | | | |
Collapse
|
10
|
Ahmadabadi M, Ruf S, Bock R. A leaf-based regeneration and transformation system for maize (Zea mays L.). Transgenic Res 2006; 16:437-48. [PMID: 17103238 DOI: 10.1007/s11248-006-9046-y] [Citation(s) in RCA: 41] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/04/2006] [Accepted: 09/21/2006] [Indexed: 11/24/2022]
Abstract
Efficient methods for in vitro propagation, regeneration, and transformation of plants are of pivotal importance to both basic and applied research. While being the world's major food crops, cereals are among the most difficult-to-handle plants in tissue culture which severely limits genetic engineering approaches. In maize, immature zygotic embryos provide the predominantly used material for establishing regeneration-competent cell or callus cultures for genetic transformation experiments. The procedures involved are demanding, laborious and time consuming and depend on greenhouse facilities. We have developed a novel tissue culture and plant regeneration system that uses maize leaf tissue and thus is independent of zygotic embryos and greenhouse facilities. We report here: (i) a protocol for the efficient induction of regeneration-competent callus from maize leaves in the dark, (ii) a protocol for inducing highly regenerable callus in the light, and (iii) the use of leaf-derived callus for the generation of stably transformed maize plants.
Collapse
Affiliation(s)
- Mohammad Ahmadabadi
- Max-Planck-Institut für Molekulare Pflanzenphysiologie, Am Mühlenberg 1, D-14476, Potsdam-Golm, Germany
| | | | | |
Collapse
|
11
|
Nagatome H, Tsutsumi M, Kino-Oka M, Taya M. Development and characterization of a photoautotrophic cell line of pak-bung hairy roots. J Biosci Bioeng 2005; 89:151-6. [PMID: 16232718 DOI: 10.1016/s1389-1723(00)88729-0] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/1999] [Accepted: 11/06/1999] [Indexed: 10/18/2022]
Abstract
A cell line of photoautotrophic pak-bung hairy roots was established from photomixotrophic ones by acclimation cultivations with a stepwise change of sucrose concentration in a medium with 3.0% CO2-enriched air supplied under continuous light irradiation. The derived photoautotrophic hairy roots had high chlorophyll content and activity of 1,5-ribulose-bisphosphate carboxylase/oxygenase, the values of which were 4.1- and 2.0-fold more than those of the parent photomixotroph, respectively. Electron microscopic observation revealed that the photoautotrophic hairy root cells possessed well-developed chloroplasts. The activities of ascorbate peroxidase and guaiacoal peroxidase found in the hairy roots were comparable to those found in the leaves and roots of parent plants of pak-bung, respectively. The elongation rate of growing points of the hairy roots was maximum at 5.0% CO2 concentration in gas phase and an incident light intensity of 10 W/m2 under the photoautotrophic conditions examined. Although light was indispensable for ensuring photoautotrophy of the hairy roots, it was found that exposure of the roots to strong light resulted in the reduction in the number of viable growing points governing the overall growth rate of the hairy roots.
Collapse
Affiliation(s)
- H Nagatome
- Department of Chemical Science and Engineering, Graduate School of Engineering Science, Osaka University, Toyonaka, Osaka 560-8531, Japan
| | | | | | | |
Collapse
|
12
|
Yoo JH, Park CY, Kim JC, Heo WD, Cheong MS, Park HC, Kim MC, Moon BC, Choi MS, Kang YH, Lee JH, Kim HS, Lee SM, Yoon HW, Lim CO, Yun DJ, Lee SY, Chung WS, Cho MJ. Direct interaction of a divergent CaM isoform and the transcription factor, MYB2, enhances salt tolerance in arabidopsis. J Biol Chem 2004; 280:3697-706. [PMID: 15569682 DOI: 10.1074/jbc.m408237200] [Citation(s) in RCA: 153] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022] Open
Abstract
Calmodulin (CaM), a ubiquitous calcium-binding protein, regulates diverse cellular functions by modulating the activity of a variety of enzymes and proteins. Plants express numerous CaM isoforms that exhibit differential activation and/or inhibition of CaM-dependent enzymes in vitro. However, the specific biological functions of plant CaM are not well known. In this study, we isolated a cDNA encoding a CaM binding transcription factor, MYB2, that regulates the expression of salt- and dehydration-responsive genes in Arabidopsis. This was achieved using a salt-inducible CaM isoform (GmCaM4) as a probe from a salt-treated Arabidopsis expression library. Using domain mapping, we identified a Ca2+-dependent CaM binding domain in MYB2. The specific binding of CaM to CaM binding domain was confirmed by site-directed mutagenesis, a gel mobility shift assay, split ubiquitin assay, and a competition assay using a Ca2+/CaM-dependent enzyme. Interestingly, the specific CaM isoform GmCaM4 enhances the DNA binding activity of AtMYB2, whereas this was inhibited by a closely related CaM isoform (GmCaM1). Overexpression of Gm-CaM4 in Arabidopsis up-regulates the transcription rate of AtMYB2-regulated genes, including the proline-synthesizing enzyme P5CS1 (Delta1-pyrroline-5-carboxylate synthetase-1), which confers salt tolerance by facilitating proline accumulation. Therefore, we suggest that a specific CaM isoform mediates salt-induced Ca2+ signaling through the activation of an MYB transcriptional activator, thereby resulting in salt tolerance in plants.
Collapse
Affiliation(s)
- Jae Hyuk Yoo
- Division of Applied Life Science (BK21 Program), Plant Molecular Biology and Biotechnology Research Center, and Environmental Biotechnology National Core Research Center, Gyeongsang National University, Jinju 660-701, Korea
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
Collapse
|
13
|
Ninomiya K, Oogami Y, Kino-Oka M, Taya M. Assessment of herbicidal toxicity based on non-destructive measurement of local chlorophyll content in photoautotrophic hairy roots. J Biosci Bioeng 2003; 95:264-70. [PMID: 16233403 DOI: 10.1016/s1389-1723(03)80027-0] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2002] [Accepted: 11/06/2002] [Indexed: 11/17/2022]
Abstract
Changes in local chlorophyll (Chl) content in photoautotrophic hairy roots of pak-bung (Ipomoea aquatica) were evaluated at incident light intensities of I=11 and 22 W/m2 by non-destructive measurement of the pigment based on color image analysis. Upon addition of 3-(3,4-dichlorophenyl)-1,1-dimethylurea (DCMU), 1-1'-dimethyl-4,4'-bipyridylium dichloride (paraquat) and 2,4-dichlorophenoxyacetic acid (2,4-D) to the medium at the median effective concentrations (0.40, 0.37 and 0.45 micromol/dm3 for DCMU, paraquat and 2,4-D, respectively), the roots showed different Chl pigmentation responses when the Chl content was measured at longitudinal lengths of l0=2.5 mm (Chl accumulation position) and l(0)=35 mm (Chl saturation position) under light irradiation. Chl accumulation index (beta) and Chl degradation index (gamma) were determined from the changes in Chl content at l0=2.5 and 35 mm, respectively, during the cultures for 96 h: beta=0% (DCMU), 93.6% (paraquat) and 93.8% (2,4-D), and gamma=98.4% (DCMU), 282% (paraquat) and 86.5% (2,4-D) at I=22 W/m2. Moreover, the bioassay system with the hairy roots was applied to the evaluation of a model sample of field water. The values of beta and gamma for the field water were determined, respectively, to be 105% and 217% at I=22 W/m2, from which the field water tested was judged to be a "paraquat-like" toxicant against the roots.
Collapse
Affiliation(s)
- Kazuaki Ninomiya
- Department of Chemical Science and Engineering, Graduate School of Engineering Science, Osaka University, 1-3 Machikaneyama-cho, Toyonaka, Osaka 560-8531, Japan
| | | | | | | |
Collapse
|
14
|
Chi-Ham CL, Keaton MA, Cannon GC, Heinhorst S. The DNA-compacting protein DCP68 from soybean chloroplasts is ferredoxin:sulfite reductase and co-localizes with the organellar nucleoid. PLANT MOLECULAR BIOLOGY 2002; 49:621-31. [PMID: 12081370 DOI: 10.1023/a:1015500431421] [Citation(s) in RCA: 29] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
The multiple copies of the chloroplast genome (plastome) are condensed and organized into nucleoids by a set of proteins. One of these, the DNA-binding protein DCP68 from soybean, has previously been shown to compact DNA and to inhibit DNA synthesis in vitro. N-terminal amino acid analysis and the absorption spectrum of the purified protein suggest that DCP68 is the siroheme protein sulfite reductase, a ferredoxin-dependent enzyme that participates in sulfur assimilation for cysteine and methionine biosynthesis. The in vivo association of this protein with chloroplast nucleoids was confirmed by immuno-colocalization with antibodies against sulfite reductase from Arabidopsis thaliana. These results suggest that DCP68 is a bifunctional chloroplast protein that participates in reductive sulfur assimilation and plays a role in organellar nucleoid organization. The fact that dephosphorylation by alkaline phosphatase affects the binding of purified DCP68 to DNA in vitro might be indicative of the way the interaction of the protein with the nucleoid is regulated in vivo.
Collapse
Affiliation(s)
- Cecilia L Chi-Ham
- Department of Chemistry and Biochemistry, University of Southern Mississippi, Hattiesburg 39406-5043, USA
| | | | | | | |
Collapse
|
15
|
Ninomiya K, Oogami Y, Kino-Oka M, Taya M. Elongating responses to herbicides of heterotrophic and photoautotrophic hairy roots derived from pak-bung plant. J Biosci Bioeng 2002; 93:505-8. [PMID: 16233240 DOI: 10.1016/s1389-1723(02)80100-1] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2002] [Accepted: 02/08/2002] [Indexed: 10/27/2022]
Abstract
The heterotrophic (HT) and photoautotrophic (PT) hairy roots of pak-bung were found to exhibit different elongating responses depending on the modes of actions of test herbicides. Treatment with 3-(3,4-dichlorophenyl)-1,1-dimethylurea (DCMU), an inhibitor of photosynthesis, decreased the tip elongation rate of the PT hairy roots, while no adverse effect was observed in the case of the HT hairy roots when DCMU were used at concentrations of 0.001-10 micromol/dm3. The values of the median effective concentration (EC50), defined as the herbicide concentration at which the tip elongation rate is decreased to 50% that of the herbicide-free control, were calculated. For the HT hairy roots: EC50 =1.8 (paraquat) and 1.4 micromol/dm3 (pyributicarb), and for the PT hairy roots: EC50 = 0.45 (DCMU), 0.37 (paraquat) and 1.2 micromol/dm3 (pyributicarb).
Collapse
Affiliation(s)
- Kazuaki Ninomiya
- Department of Chemical Science and Engineering, Graduate School of Engineering Science, Osaka University, 1-3 Machikaneyama-cho, Toyonaka, Osaka 560-8531, Japan
| | | | | | | |
Collapse
|
16
|
Kino-oka M, Nagatome H, Taya M. Characterization and application of plant hairy roots endowed with photosynthetic functions. ADVANCES IN BIOCHEMICAL ENGINEERING/BIOTECHNOLOGY 2002; 72:183-218. [PMID: 11729754 DOI: 10.1007/3-540-45302-4_7] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/22/2023]
Abstract
The scope of this review includes the physiological properties of the hairy roots induced by light irradiation and the kinetic analysis considering the effects of light intensity on hairy root cultures. The cell lines of photomixotrophic and photoautotrophic hairy roots of pak-bung are established from heterotrophic ones by improving the photosynthetic ability of hairy roots through acclimation cultures under light irradiation. Comparisons of physiological properties of derived photoautotrophic cell line with photomixotrophic and heterotrophic ones are also made through histological examination. Moreover, the effect of photosynthesis inhibitor on the photoautotrophic growth of the hairy roots is described. By elucidating the influences of light intensity on growth and chlorophyll formation of photoautotrophic and photomixotrophic hairy roots, a kinetic model was applied to describe the hairy root growth and chlorophyll formation of these cell lines of hairy roots.
Collapse
Affiliation(s)
- M Kino-oka
- Department of Chemical Science and Engineering, Osaka University, Machikaneyama-cho 1-3, Toyonaka, Osaka 560-8531, Japan
| | | | | |
Collapse
|
17
|
Ebel C, Gómez LG, Schmit AC, Neuhaus-Url G, Boller T. Differential mRNA degradation of two beta-tubulin isoforms correlates with cytosolic Ca2+ changes in glucan-elicited soybean cells. PLANT PHYSIOLOGY 2001; 126:87-96. [PMID: 11351073 PMCID: PMC102284 DOI: 10.1104/pp.126.1.87] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/16/2001] [Accepted: 01/18/2001] [Indexed: 05/23/2023]
Abstract
Transgenic soybean (Glycine max) culture cells expressing apoaequorin, a Ca2+ indicator, were exposed to glucan fragments derived from Phytophthora sojae or to chitin oligomers. The effects of these elicitors on cytosolic Ca2+ concentrations and on mRNA levels of two beta-tubulin isoforms, tubB1 and tubB2, were investigated. The glucan elicitors, to which the cells are known to react with a biphasic cytosolic Ca2+ increase, induced a down-regulation of the tubB1 mRNA levels while the tubB2 mRNA level remained constant. The decrease of tubB1 mRNA level was observed after 1 hour of glucan treatment. In contrast, chitin oligomers, known to provoke a monophasic Ca2+ increase of short duration, did not affect the tubB1 mRNA level. Pre-incubation with 10 mM 1,2-bis(o-aminophenoxy)ethane-N,N,N',N'-tetraacetic acid, an extracellular Ca2+ chelator, blocked the cytosolic Ca2+ increase as well as the decrease of tubB1 mRNA levels induced by glucan elicitors. Likewise, pre-incubation with 1 mM neomycin, which reduced only the second glucan-induced Ca2+ peak, blocked the decrease of tubB1 mRNA level. Experiments with cordycepin, a transcription inhibitor, indicated that glucan fragments induced the degradation of tubB1 mRNA. In conclusion, the glucan-induced cytosolic Ca2+ changes are correlated with a strong increase in tubB1 mRNA degradation.
Collapse
Affiliation(s)
- C Ebel
- Friedrich Miescher-Institut, P.O. Box 2543, CH-4002 Basel, Switzerland.
| | | | | | | | | |
Collapse
|
18
|
Yamagata H, Saka K, Tanaka T, Aizono Y. Light activates a 46-kDa MAP kinase-like protein kinase in soybean cell culture. FEBS Lett 2001; 494:24-9. [PMID: 11297728 DOI: 10.1016/s0014-5793(01)02297-9] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
Abstract
Light induced rapid and transient activation of a 46-kDa protein kinase in soybean photomixotrophic cell culture. This kinase was designated as LAP kinase (light signal-activated protein kinase). Activation of LAP kinase in response to light was associated with tyrosine phosphorylation of the kinase, and treatment of the kinase with protein tyrosine phosphatase abolished its activity. The LAP kinase efficiently phosphorylated myelin basic protein and histone, but did not phosphorylate casein. Phospho-amino acid analysis indicated that the LAP kinase was a serine/threonine protein kinase. These results indicated that the LAP kinase is related to the MAP kinase family of protein kinases.
Collapse
Affiliation(s)
- H Yamagata
- Laboratory of Biochemistry, Faculty of Agriculture, Kobe University, Rokkodai-cho 1, Nada-ku, 657-8501, Kobe, Japan.
| | | | | | | |
Collapse
|
19
|
NINOMIYA KAZUAKI, NAGATOME HIROFUMI, KINO-OKA MASAHIRO, TAYA MASAHITO. Elongating Potential of Pak-Bung Hairy Roots under Photoautotrophic Culture Condition. JOURNAL OF CHEMICAL ENGINEERING OF JAPAN 2001. [DOI: 10.1252/jcej.34.1396] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- KAZUAKI NINOMIYA
- Department of Chemical Science and Engineering, Graduate School of Engineering Science, Osaka University
| | - HIROFUMI NAGATOME
- Department of Chemical Science and Engineering, Graduate School of Engineering Science, Osaka University
| | - MASAHIRO KINO-OKA
- Department of Chemical Science and Engineering, Graduate School of Engineering Science, Osaka University
| | - MASAHITO TAYA
- Department of Chemical Science and Engineering, Graduate School of Engineering Science, Osaka University
- Research Center for Solar Energy Chemistry, Osaka University
| |
Collapse
|
20
|
Müller J, Staehelin C, Xie ZP, Neuhaus-Url G, Boller T. Nod factors and chitooligomers elicit an increase in cytosolic calcium in aequorin-expressing soybean cells. PLANT PHYSIOLOGY 2000; 124:733-40. [PMID: 11027722 PMCID: PMC59178 DOI: 10.1104/pp.124.2.733] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/21/2000] [Accepted: 06/05/2000] [Indexed: 05/20/2023]
Abstract
Rhizobial Nod factors (NFs) function as nodulation signals that trigger symbiotic responses of leguminous host plants. NFs consist of a chitin oligomer backbone carrying a fatty acid at the non-reducing end. Depending on the rhizobial strain, NFs carry additional substituents, which may determine host specificity. Transgenic suspension-cultured soybean (Glycine max [L.] Merr.) cells expressing aequorin have been used to record cytosolic [Ca(2+)] changes upon treatment with purified NFs and chitin fragments. Both compounds elicited an increase of cytosolic [Ca(2+)] at nanomolar concentrations. The shape and amplitude of cytosolic [Ca(2+)] changes was similar to the response elicited by un-derivatized chitin oligomers. Cells challenged first with NFs did not respond to a subsequent treatment with chitin oligomers and vice versa. Dose-response experiments showed that un-derivatized chitin oligomers were more active compared with NFs. The capacity of NFs to elicit the calcium response depended on their structure. The presence of reducing end substituents in methylfucosylated NFs from Rhizobium sp. NGR234 and the O-acetyl group at the non-reducing end in NFs from Sinorhizobium meliloti attenuated the activity to cause the calcium changes. The sulfate group in NFs from Rhizobium tropici did not affect the elicitor activity. Pentameric S. meliloti NFs were more active than tetrameric molecules, whereas trimeric or dimeric degradation products were inactive. Substituents in NFs may have the function to avoid stimulation of defense reactions mediated by the perception system for chitin oligomers.
Collapse
Affiliation(s)
- J Müller
- Friedrich-Miescher-Institut, P.O. Box 2543, CH-4002 Basel, Switzerland.
| | | | | | | | | |
Collapse
|
21
|
Chung WS, Lee SH, Kim JC, Heo WD, Kim MC, Park CY, Park HC, Lim CO, Kim WB, Harper JF, Cho MJ. Identification of a calmodulin-regulated soybean Ca(2+)-ATPase (SCA1) that is located in the plasma membrane. THE PLANT CELL 2000; 12:1393-407. [PMID: 10948258 PMCID: PMC149111 DOI: 10.1105/tpc.12.8.1393] [Citation(s) in RCA: 19] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/23/2000] [Accepted: 05/24/2000] [Indexed: 05/17/2023]
Abstract
Ca(2)+-ATPases are key regulators of Ca(2+) ion efflux in all eukaryotes. Animal cells have two distinct families of Ca(2+) pumps, with calmodulin-stimulated pumps (type IIB pumps) found exclusively at the plasma membrane. In plants, no equivalent type IIB pump located at the plasma membrane has been identified at the molecular level, although related isoforms have been identified in non-plasma membrane locations. Here, we identify a plant cDNA, designated SCA1 (for soybean Ca(2+)-ATPase 1), that encodes Ca(2+)-ATPase and is located at the plasma membrane. The plasma membrane localization was determined by sucrose gradient and aqueous two-phase membrane fractionations and was confirmed by the localization of SCA1p tagged with a green fluorescent protein. The Ca(2+)-ATPase activity of the SCA1p was increased approximately sixfold by calmodulin (K(1/2) approximately 10 nM). Two calmodulin binding sequences were identified in the N-terminal domain. An N-terminal truncation mutant that deletes sequence through the two calmodulin binding sites was able to complement a yeast mutant (K616) that was deficient in two endogenous Ca(2+) pumps. Our results indicate that SCA1p is structurally distinct from the plasma membrane-localized Ca(2+) pump in animal cells, belonging instead to a novel family of plant type IIB pumps found in multiple subcellular locations. In plant cells from soybean, expression of this plasma membrane pump was highly and rapidly induced by salt (NaCl) stress and a fungal elicitor but not by osmotic stress.
Collapse
Affiliation(s)
- W S Chung
- Department of Biochemistry, Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Chinju 660-701, Korea
| | | | | | | | | | | | | | | | | | | | | |
Collapse
|
22
|
Lee SH, Kim MC, Heo WD, Kim JC, Chung WS, Park CY, Park HC, Cheong YH, Kim CY, Lee KJ, Bahk JD, Lee SY, Cho MJ. Competitive binding of calmodulin isoforms to calmodulin-binding proteins: implication for the function of calmodulin isoforms in plants. BIOCHIMICA ET BIOPHYSICA ACTA 1999; 1433:56-67. [PMID: 10446359 DOI: 10.1016/s0167-4838(99)00149-1] [Citation(s) in RCA: 40] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
Abstract
In plants, multiple calmodulin (CaM) isoforms exist in an organism which vary in their primary structures in as much as 32 residues out of their 148 amino acids. These CaM isoforms show differences in their expression patterns and/or target enzyme activation ability. To further understand the biological significance of CaM isoforms, we examined whether CaM isoforms act on specific regulatory targets. In gel overlay assays on various soybean tissue extracts, surprisingly, two soybean CaM isoforms (SCaM-1 and SCaM-4) did not show significant differences in their target binding protein profiles, although they exhibited minor differences in their relative target binding affinities. In addition, both SCaM isoforms not only effectively bound five known plant CaMBPs, but also showed competitive binding to these proteins. Finally, immunolocalization experiments with the SCaM proteins in sections of various tissues using specific antibodies revealed similar distribution patterns for the SCaM isoforms except for root tissues, which indicates that the SCaM isoforms are concomitantly expressed in most plant tissues. These results suggest that CaM isoforms may compete for binding to CaMBPs in vivo. This competitive nature of CaM isoforms may allow modulation of Ca(2+)/CaM signaling pathways by virtue of relative abundance and differential target activation potency.
Collapse
Affiliation(s)
- S H Lee
- Department of Biochemistry, Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Chinju 660-701, South Korea
| | | | | | | | | | | | | | | | | | | | | | | | | |
Collapse
|
23
|
Cannon GC, Ward LN, Case CI, Heinhorst S. The 68 kDa DNA compacting nucleoid protein from soybean chloroplasts inhibits DNA synthesis in vitro. PLANT MOLECULAR BIOLOGY 1999; 39:835-45. [PMID: 10350096 DOI: 10.1023/a:1006135615924] [Citation(s) in RCA: 23] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/04/2023]
Abstract
Nucleoids were purified from chloroplasts of dividing soybean cells and their polypeptide composition analyzed by SDS-polyacrylamide gel electrophoresis. Of the 15-20 nucleoid-associated polypeptides, several demonstrated DNA binding activity. Upon disruption of the nucleoids with high concentrations of NaCl, a subset of these proteins and the majority of chloroplast DNA were recovered in the supernatant after centrifugation. Removal of the salt by dialysis resulted in formation of nucleoprotein complexes resembling genuine nucleoids. Purification of these structures revealed three major proteins of 68, 35 and 18 kDa. After purification of the 68 kDa protein to homogeneity, this protein was able to compact purified chloroplast DNA into a nucleoid-like structure in a protein concentration-dependent fashion. Addition of the 68 kDa protein to an in vitro chloroplast DNA replication system resulted in complete inhibition of nucleotide incorporation at concentrations above 300 ng of 68 kDa protein per microg of template DNA. These results led to in situ immunofluorescence studies of chloroplasts replicating DNA which suggested that newly synthesized DNA is not co-localized with nucleoids. Presumably, either the plastid replication machinery has means of removing nucleoid proteins prior to replication or the concentration of nucleoid proteins is tightly regulated and the proteins turned over in order to allow replication to proceed.
Collapse
Affiliation(s)
- G C Cannon
- Department of Chemistry and Biochemistry, The University of Southern Mississippi, Hattiesburg 39406-4043, USA
| | | | | | | |
Collapse
|
24
|
Heo WD, Lee SH, Kim MC, Kim JC, Chung WS, Chun HJ, Lee KJ, Park CY, Park HC, Choi JY, Cho MJ. Involvement of specific calmodulin isoforms in salicylic acid-independent activation of plant disease resistance responses. Proc Natl Acad Sci U S A 1999; 96:766-71. [PMID: 9892708 PMCID: PMC15211 DOI: 10.1073/pnas.96.2.766] [Citation(s) in RCA: 209] [Impact Index Per Article: 8.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/04/1998] [Indexed: 11/18/2022] Open
Abstract
The Ca2+ signal is essential for the activation of plant defense responses, but downstream components of the signaling pathway are still poorly defined. Here we demonstrate that specific calmodulin (CaM) isoforms are activated by infection or pathogen-derived elicitors and participate in Ca2+-mediated induction of plant disease resistance responses. Soybean CaM (SCaM)-4 and SCaM-5 genes, which encode for divergent CaM isoforms, were induced within 30 min by a fungal elicitor or pathogen, whereas other SCaM genes encoding highly conserved CaM isoforms did not show such response. This pathogen-triggered induction of these genes specifically depended on the increase of intracellular Ca2+ level. Constitutive expression of SCaM-4 and SCaM-5 in transgenic tobacco plants triggered spontaneous induction of lesions and induces an array of systemic acquired resistance (SAR)-associated genes. Surprisingly, these transgenic plants have normal levels of endogenous salicylic acid (SA). Furthermore, coexpression of nahG gene did not block the induction of SAR-associated genes in these transgenic plants, indicating that SA is not involved in the SAR gene induction mediated by SCaM-4 or SCaM-5. The transgenic plants exhibit enhanced resistance to a wide spectrum of virulent and avirulent pathogens, including bacteria, fungi, and virus. These results suggest that specific CaM isoforms are components of a SA-independent signal transduction chain leading to disease resistance.
Collapse
Affiliation(s)
- W D Heo
- Department of Biochemistry, Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Chinju 660-701, Korea
| | | | | | | | | | | | | | | | | | | | | |
Collapse
|
25
|
Yamagata H, Nakajima A, Bowler C, Iwasaki T. Molecular cloning and characterization of a cDNA encoding asparagine synthetase from soybean (Glycine max L.) cell cultures. Biosci Biotechnol Biochem 1998; 62:148-50. [PMID: 9501527 DOI: 10.1271/bbb.62.148] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Abstract
A cDNA encoding glutamine-dependent asparagine synthetase was isolated from dark-adapted Glycine max cell culture. The deduced amino acid sequence showed 76-89% identity with other plant sequences. The gene for asparagine synthetase is expressed predominantly in shoots as compared to roots of etiolated plants and the level of expression decreases following light treatment, suggesting that the gene expression is down-regulated by light.
Collapse
Affiliation(s)
- H Yamagata
- Laboratory of Biochemistry, Faculty of Agriculture, Kobe University, Japan
| | | | | | | |
Collapse
|
26
|
Chang CC, Locy RD, Smeda R, Sahi SV, Singh NK. Photoautotrophic tobacco cells adapted to grow at high salinity. PLANT CELL REPORTS 1997; 16:495-502. [PMID: 30727639 DOI: 10.1007/bf01092773] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/01/1996] [Revised: 06/03/1996] [Accepted: 10/14/1996] [Indexed: 06/09/2023]
Abstract
Photoautotrophic tobacco (Nicotiana tabacum var. Wisconsin 38) cell cultures were gradually adapted to grow in media containing the normally inhibitory concentration of 20 g l-1 NaCl. Both salt-adapted cultures maintained in 20 g l-1 NaCl (P20) and salt-unadapted (P0) cultures demonstrated similar chloroplast morphology and similar growth characteristics on a dry weight basis, but P20 cells showed reduced growth on a fresh weight basis compared to P0 cells. Compared to P0 cells, intracellular sucrose levels were significantly higher in P20 cells while starch levels in P0 cells were significantly higher than in P20 cells. Levels of intracellular and extracellular reducing sugars, and chlorophyll accumulated to the same degree in P20 and P0 cells, but accumulation was delayed by approximately 13 days in P20 cells. O2 evolution and14[CO2] fixation was more resistant to inhibition by NaCl in P20 cells than in P0 cells. However, significant changes in the abundance of thylakoid membrane proteins could not be demonstrated between P20 and P0 cells although higher levels of Rubisco on a per milligram chlorophyll basis were observed in P0 compared to P20 chloroplasts.
Collapse
Affiliation(s)
- C -C Chang
- Department of Botany and Microbiology, Auburn University, Room 101, Rouse Life Sciences Building, 36849, Auburn, AL, USA
| | - R D Locy
- Department of Botany and Microbiology, Auburn University, Room 101, Rouse Life Sciences Building, 36849, Auburn, AL, USA
| | - R Smeda
- Department of Botany and Microbiology, Auburn University, Room 101, Rouse Life Sciences Building, 36849, Auburn, AL, USA
| | - S V Sahi
- Department of Botany and Microbiology, Auburn University, Room 101, Rouse Life Sciences Building, 36849, Auburn, AL, USA
| | - N K Singh
- Department of Biology, Alabama State University, 36101, Montgomery, AL, USA
| |
Collapse
|
27
|
Fitzgerald MS, McKnight TD, Shippen DE. Characterization and developmental patterns of telomerase expression in plants. Proc Natl Acad Sci U S A 1996; 93:14422-7. [PMID: 8962067 PMCID: PMC26148 DOI: 10.1073/pnas.93.25.14422] [Citation(s) in RCA: 125] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/1996] [Accepted: 10/14/1996] [Indexed: 02/03/2023] Open
Abstract
Telomerase activity is developmentally regulated in mammals. Here we examine telomerase activity in plants, whose development differs in fundamental ways from that of animals. Using a modified version of the telomere repeat amplification protocol (TRAP) assay, we detected an activity in extracts from carrots, cauliflower, soybean, Arabidopsis, and rice with all the characteristics expected for a telomerase synthesizing the plant telomere repeat sequence TTTAGGG. The activity was dependent on RNA and protein components, required dGTP, dATP, and dTTP, but not dCTP, and generated products with a seven nucleotide periodicity. Telomerase activity was abundant in cauliflower meristematic tissue and undifferentiated cells from Arabidopsis, soybean, and carrot suspension cultures, but was low or not detectable in a sampling of differentiated tissues from mature plants. Telomerase from cauliflower meristematic tissues exhibited relaxed DNA sequence requirements, which might reflect the capacity to form telomeres on broken chromosomes in vivo. The dramatic differences in telomerase expression and their correlation with cellular proliferation capacity mirror changes in human telomerase levels during differentiation and immortalization. Hence, telomerase activation appears to be a conserved mechanism involved in conferring long-term proliferation capacity.
Collapse
Affiliation(s)
- M S Fitzgerald
- Department of Biochemistry and Biophysics, Texas A&M University, College Station 77843, USA
| | | | | |
Collapse
|
28
|
Lozovaya VV, Zabotina OA, Widholm JM. Synthesis and Turnover of Cell-Wall Polysaccharides and Starch in Photosynthetic Soybean Suspension Cultures. PLANT PHYSIOLOGY 1996; 111:921-929. [PMID: 12226338 PMCID: PMC157911 DOI: 10.1104/pp.111.3.921] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/18/2023]
Abstract
Soybean (Glycine max [L.] Merr.) suspension cultures grown under photoautotrophic and photomixotrophic (1% sucrose) culture conditions were used in 14CO2 pulse-chase experiments to follow cell-wall polysaccharide and starch biosynthesis and turnover. Following a 30-min pulse with 14CO2, about one-fourth of the 14C of the photoautotrophic cells was incorporated into the cell wall; this increased to about 80% during a 96-h chase in unlabeled CO2. Cells early in the cell culture cycle (3 d) incorporated more 14C per sample and also exhibited greater turnover of the pectin and hemicellulose fractions as shown by loss of 14C during the 96-h chase than did 10- and 16-d cells. When the chase occurred in the dark, less 14C was incorporated into the cell wall because of the cessation of growth and higher respiratory loss. The dark effect was much less pronounced with the photomixotrophic cells. Even though the cell starch levels were much lower than in leaves, high 14C incorporation was found during the pulse, especially in older cells. The label was largely lost during the chase, indicating that starch is involved in the short-term storage of photosynthate. Thus, these easily labeled and manipulated photosynthetic cells demonstrated extensive turnover of the cell-wall pectin and hemicellulose fractions and starch during the normal growth process.
Collapse
Affiliation(s)
- V. V. Lozovaya
- University of Illinois, Department of Crop Sciences, Edward R. Madigan Laboratory, 1201 West Gregory, Urbana, Illinois 61801 (V.V.L., J.M.W.)
| | | | | |
Collapse
|
29
|
Suzuki G, Ohta H, Kato T, Igarashi T, Sakai F, Shibata D, Takano A, Masuda T, Shioi Y, Takamiya K. Induction of a novel cytochrome P450 (CYP93 family) by methyl jasmonate in soybean suspension-cultured cells. FEBS Lett 1996; 383:83-6. [PMID: 8612798 DOI: 10.1016/0014-5793(96)00229-3] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023]
Abstract
We isolated a cDNA encoding a novel cytochrome P450 (CYP93A1) from soybean suspension-cultured cells that had been treated with methyl jasmonate (MeJA). The amino acid sequence of the gene product had 30-40% identity with those of other plant P450s. The protein contained the heme-binding domain which is highly conserved among plant P450s. Transcription of the cytochrome P450 gene in soybean cells was induced by 30 microM MeJA even in the presence of cycloheximide, and reached maximum level 6 h after MeJA treatment. This is the first report of a plant cytochrome P450 gene whose transcription is induced by MeJA even without protein synthesis.
Collapse
Affiliation(s)
- G Suzuki
- Department of Biological Sciences, Faculty of Bioscience and Biotechnology, Yokohama, Japan
| | | | | | | | | | | | | | | | | | | |
Collapse
|
30
|
Cannon GC, Hedrick LA, Heinhorst S. Repair mechanisms of UV-induced DNA damage in soybean chloroplasts. PLANT MOLECULAR BIOLOGY 1995; 29:1267-77. [PMID: 8616223 DOI: 10.1007/bf00020467] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/22/2023]
Abstract
In order to better understand the biochemical mechanisms of DNA metabolism in chloroplasts, repair of UV induced plastome damage in vivo was determined by exposure of soybean suspension cells to UV light and subsequent quantitation of the damage remaining in nuclear and chloroplast encoded genes with time by quantitative polymerase chain reaction (QPCR). The kinetics of damage repair in the nuclear rbcS gene suggest that photoreactivation and dark mechanisms are active, while for the plastome encoded psbA gene only a light-dependent repair process was detected which is considerably slower than would be expected for photolyase-mediated photoreactivation.
Collapse
Affiliation(s)
- G C Cannon
- Department of Chemistry and Biochemistry, University of Southern Mississippi, Hattiesburg 39406-5043, USA
| | | | | |
Collapse
|
31
|
Abstract
We have previously used single-cell assays in a phytochrome-deficient tomato mutant to demonstrate that phytochrome signaling involves heterotrimeric G proteins, calcium, and calmodulin. While G protein activation could stimulate full chloroplast development and anthocyanin pigment biosynthesis, calcium and calmodulin could not induce anthocyanins and were only able to stimulate the development of immature chloroplasts lacking cytochrome b6f and photosystem I core components. We now report that cyclic GMP is able to trigger the production of anthocyanins, and that a combination of cyclic GMP with calcium can induce the development of fully mature chloroplasts containing all the photosynthetic machinery. Furthermore, using reporter genes for these different pathways (cab-gus, chs-gus, and fnr-gus) we demonstrate that cGMP and calcium act primarily by modulating gene expression.
Collapse
Affiliation(s)
- C Bowler
- Laboratory of Plant Molecular Biology, Rockefeller University, New York, New York 10021-6399
| | | | | | | |
Collapse
|
32
|
Hedrick LA, Heinhorst S, White MA, Cannon GC. Analysis of soybean chloroplast DNA replication by two-dimensional gel electrophoresis. PLANT MOLECULAR BIOLOGY 1993; 23:779-92. [PMID: 8251631 DOI: 10.1007/bf00021533] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/22/2023]
Abstract
Chloroplast DNA replication was studied in the green, autotrophic suspension culture line SB-1 of Glycine max. Three regions (restriction fragments Sac I 14.5, Pvu II 4.1 and Pvu II 14.8) on the plastome were identified that displayed significantly higher template activity in in vitro DNA replication assays than all other cloned restriction fragments of the organelle genome, suggesting that these clones contain sequences that are able to direct initiation of DNA replication in vitro. In order to confirm that the potential in vitro origin sites are functional in vivo as well, replication intermediates were analyzed by two-dimensional gel electrophoresis using cloned restriction fragments as probes. The two Pvu II fragments that supported deoxynucleotide incorporation in vitro apparently do not contain a functional in vivo replication origin since replication intermediates from these areas of the plastome represent only fork structures. The Sac I 14.5 chloroplast DNA fragment, on the other hand, showed intermediates consistent with a replication bubble originating within its borders, which is indicative of an active in vivo origin. Closer examination of cloned Sac I 14.5 sub-fragments confirmed high template activity in vitro for two, S/B 5 and S/B 3, which also seem to contain origin sites utilized in vivo as determined by two-dimensional gel electrophoresis. The types of replication intermediate patterns obtained for these sub-fragments are consistent with the double D-loop model for chloroplast DNA replication with both origins being located in the large unique region of the plastome [17, 18]. This is the first report of a chloroplast DNA replication origin in higher plants that has been directly tested for in vivo function.
Collapse
Affiliation(s)
- L A Hedrick
- Department of Chemistry and Biochemistry, University of Southern Mississippi, Hattiesburg 39406-5043
| | | | | | | |
Collapse
|
33
|
Che FS, Sato F, Hyeon SB, Isogai A, Yamada Y, Suzuki A. Stimulation of photosynthesis and growth of photoautotrophically cultured plant cells by choline and its analogs. PLANT CELL REPORTS 1993; 12:691-697. [PMID: 24201966 DOI: 10.1007/bf00233421] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/13/1993] [Revised: 07/27/1993] [Indexed: 06/02/2023]
Abstract
The effects of choline and its analogs, allylcholine and benzylcholine, on the photosynthesis and on the cell growth were examined using photoautotrophically, photomixotrophically and heterotrophically cultured cells. The addition of choline and its analogs stimulated the cellular photosynthetic activity and enhanced the dry weight increase in both photoautotrophic and photomixotrophic cells. However, the growth of heterotrophic cells did not increase by the addition of choline and choline analogs. The photosynthetic electron transport activity in thylakoid membrane was enhanced when cells were treated with choline and choline analogs, suggesting that thylakoid membranes are the initial site of the stimulation of cellular photosynthesis. The stimulatory effect of choline and choline analogs was sustained even after 3 week-culture. Among the choline analogs tested, benzylcholine showed the most quick effect and was effective at a lower concentration (1 mg/l) than choline (10 mg/l).
Collapse
Affiliation(s)
- F S Che
- Department of Agricultural Chemistry, The University of Tokyo, Bunkyo-ku, 113, Tokyo, Japan
| | | | | | | | | | | |
Collapse
|
34
|
Properties and Uses of Photoautotrophic Plant Cell Cultures. INTERNATIONAL REVIEW OF CYTOLOGY 1992. [DOI: 10.1016/s0074-7696(08)62455-9] [Citation(s) in RCA: 34] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/03/2022]
|
35
|
Gillott MA, Erdös G, Buetow DE. Light-Induced Chloroplast Differentiation in Soybean Cells in Suspension Culture : Ultrastructural Changes during the Bleaching and Greening Cycles. PLANT PHYSIOLOGY 1991; 96:962-70. [PMID: 16668282 PMCID: PMC1080872 DOI: 10.1104/pp.96.3.962] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/07/2023]
Abstract
Suspension cultures of SB-P cells of soybean (Glycine max) provide a novel, reproducible, and readily manipulable greening system useful for inducing chloroplast differentiation. The cells are subcultured and grown heterotrophically (3% sucrose) in the dark for at least three successive 14-day periods, subcultured and grown in the dark for 7 days more, and finally placed under white light and grown photoautotrophically. Chlorophyll begins to accumulate by 1 hour of light and continues up to 12 days. The chlorophyll a:chlorophyll b ratio is 3:1. Dark-grown cells contain a small amount of total carotenoids which increase 10-fold during greening. Chloroplast differentiation is strictly light dependent, with photosynthetic pigments accumulating in the light and being lost from cells returned to the dark. In the dark, the chloroplasts dedifferentiate to amyloplasts as the organized thylakoid network is lost and starch accumulates. Under continuous light, the amyloplasts differentiate into mature chloroplasts as the organelle elongates, becomes spanned by several bands of thylakoids, and undergoes grana formation. Chloroplast differentiation in SB-P cells is similar to that in intact angiosperms developing under normal light-dark cycles.
Collapse
Affiliation(s)
- M A Gillott
- Center for Electron Microscopy, University of Illinois, Urbana, Illinois 61801
| | | | | |
Collapse
|
36
|
Goldstein CS, Widholm JM. Photosynthetic characterization of photoautotrophic cells cultured in a minimal medium. PLANT PHYSIOLOGY 1990; 94:1641-6. [PMID: 16667897 PMCID: PMC1077432 DOI: 10.1104/pp.94.4.1641] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/09/2023]
Abstract
Photosynthetic properties of photoautotrophic suspensions cultured in a minimal growth medium have been evaluated to determine whether changes have occurred in ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) activity, phosphoenol-pyruvate (PEP) carboxylase activity, chlorophyll content, or culture growth. Five photoautotrophic lines Amaranthus powellii, Datura innoxia, Glycine max, Gossypium hirsutum, and a Nicotiana tabacum-Nicotiana glutinosa fusion hybrid were grown in a medium without organic carbon other than phytohormones, and without vitamins. These photoautotrophic lines had total Rubisco activities ranging from 85 to 266 micromoles CO(2) fixed per milligram chlorophyll hour(-1), with percent activation of Rubisco ranging from 16 to 53%. Inclusion of protease inhibitors in the homogenization buffer did not result in higher Rubisco activity. PEP carboxylase activity for cells cultured in minimal medium was found to range from 16 to 146 micromoles CO(2) per milligram chlorophyll hour(-1), with no higher activity in the C(4)Amaranthus cells compared with PEP carboxylase activity in the C(3) species assayed. Rubisco-to-PEP carboxylase ratios ranged from 2.2 to 1 up to 9.4 to 1. Chlorophyll contents increased in all but the Nicotiana cell line, and all of the photoautotrophic culture lines were capable of growth in vitamin-free medium with the exception of SB-P, which requires thiamine.
Collapse
Affiliation(s)
- C S Goldstein
- University of Illinois, Urbana-Champaign, Turner Hall, Urbana Illinois 61801
| | | |
Collapse
|
37
|
Norman MA, Liebl RA, Widholm JM. Site of clomazone action in tolerant-soybean and susceptible-cotton photomixotrophic cell suspension cultures. PLANT PHYSIOLOGY 1990; 94:704-9. [PMID: 16667768 PMCID: PMC1077288 DOI: 10.1104/pp.94.2.704] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/09/2023]
Abstract
Studies were conducted to determine the herbicidal site of clomazone action in tolerant-soybean (Glycine max [L.] Merr. cv Corsoy) (SB-M) and susceptible-cotton (Gossypium hirsutum [L.] cv Stoneville 825) (COT-M) photomixotrophic cell suspension cultures. Although a 10 micromolar clomazone treatment did not significantly reduce the terpene or mixed terpenoid content (microgram per gram fresh weight) of the SB-M cell line, there was over a 70% reduction in the chlorophyll (Chl), carotenoid (CAR), and plastoquinone (PQ) content of the COT-M cell line. The tocopherol (TOC) content was reduced only 35.6%. Reductions in the levels of Chl, CAR, TOC, and PQ indicate that the site of clomazone action in COT-M cells is prior to geranylgeranyl pyrophosphate (GGPP). The clomazone treatment did not significantly reduce the flow of [(14)C]mevalonate ([(14)C]MEV) (nanocuries per gram fresh weight) into CAR and the three mixed terpenoid compounds of SB-M cells. Conversely, [(14)C]MEV incorporation into CAR and the terpene moieties of Chl, PQ, and TOC in COT-M cells was reduced at least 73%, indicating that the site of clomazone action must be after MEV. Sequestration of clomazone away from the chloroplast cannot account for soybean tolerance to clomazone since chloroplasts isolated from both cell lines incubated with [(14)C]clomazone contained a similar amount of radioactivity (disintegrations per minute per microgram of Chl). The possible site(s) of clomazone inhibition include mevalonate kinase, phosphomevalonate kinase, pyrophosphomevalonate decarboxylase, isopentenyl pyrophosphate isomerase, and/or a prenyl transferase.
Collapse
Affiliation(s)
- M A Norman
- Department of Agronomy, University of Illinois, Urbana, Illinois 61801
| | | | | |
Collapse
|
38
|
Cannon GC, Heinhorst S. Partial purification and characterization of a DNA helicase from chloroplasts of Glycine max. PLANT MOLECULAR BIOLOGY 1990; 15:457-64. [PMID: 1966489 DOI: 10.1007/bf00019162] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/16/2023]
Abstract
A DNA helicase activity was detected in extracts of purified chloroplasts from the SB-1 cell line of Glycine max and partially purified by column chromatography on DEAE cellulose, phosphocellulose, and single-stranded DNA cellulose. The chloroplast helicase has a DNA-dependent ATPase activity, and its strand displacement activity is strictly dependent upon the presence of a nucleoside triphosphate and Mg2+ or Mn2+. Strand displacement activity does not require a free unannealed single-strand or replication fork-like structure.
Collapse
Affiliation(s)
- G C Cannon
- Department of Chemistry and Biochemistry, University of Southern Mississippi, Hattiesburg 39406
| | | |
Collapse
|
39
|
Mason HS, Mullet JE. Expression of two soybean vegetative storage protein genes during development and in response to water deficit, wounding, and jasmonic acid. THE PLANT CELL 1990; 2:569-79. [PMID: 2152178 PMCID: PMC159912 DOI: 10.1105/tpc.2.6.569] [Citation(s) in RCA: 120] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/19/2023]
Abstract
The expression of vspA and vspB genes encoding soybean vegetative storage proteins was studied during seedling development and in response to water deficit, tissue wounding, and jasmonic acid treatment. vspA and vspB encode VSP-alpha and VSP-beta, 28-kilodalton and 31-kilodalton vacuole-localized polypeptides that are 80% homologous. vspA and vspB mRNAs could be distinguished on RNA blots using 3'-end probes. vspA mRNA was threefold to sevenfold more abundant than vspB mRNA in leaves, about equal expression was observed in stems, and vspB mRNA exceeded vspA in roots. Transcripts were not detected in dry seeds but appeared in intact or excised seedling axes between 12 hr and 24 hr after initiation of imbibition. Both transcripts were highly abundant in the meristematic region of seedling stems and in developing leaves but were rare in mature stems, leaves, and roots. In situ localization showed that vsp transcripts were found throughout the hypocotyl hook but were concentrated in cells associated with the epidermis and vascular bundles. Water deficit caused increased vsp mRNA levels in leaves and stems, which suggests that inhibition of growth necessitates temporary storage of amino acids. Wounding induced primarily vspB mRNA in etiolated seedlings, whereas both vspA and vspB mRNA levels increased in wounded leaves. Jasmonic acid and methyl jasmonate were potent inducers of vsp gene expression in cell cultures, developing axes, leaves, and roots. We hypothesize that jasmonic acid levels modulate vsp mRNA abundance in vivo.
Collapse
Affiliation(s)
- H S Mason
- Department of Biochemistry and Biophysics, Texas A&M University, College Station 77843
| | | |
Collapse
|
40
|
Heinhorst S, Cannon GC, Weissbach A. Chloroplast and mitochondrial DNA polymerases from cultured soybean cells. PLANT PHYSIOLOGY 1990; 92:939-45. [PMID: 16667409 PMCID: PMC1062399 DOI: 10.1104/pp.92.4.939] [Citation(s) in RCA: 23] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/09/2023]
Abstract
DNA polymerases were purified from chloroplasts and mitochondria of cultured Glycine max cells. The chloroplast enzyme exists in two forms which are indistinguishable from each other biochemically. All three organellar enzymes have an estimated molecular weight of 85,000 to 90,000 and prefer poly(rA)dT(12-18) over activated DNA as a template in vitro. Maximum activity of the chloroplast and mitochondrial DNA polymerases requires KCl and a reducing agent, and the enzymes are completely resistant to inhibitors of DNA polymerase alpha. Taken together, these properties classify the soybean organellar enzymes as DNA polymerases gamma. A unique feature that distinguishes the plant enzymes from their animal counterparts is their resistance to dideoxyribonucleotides.
Collapse
Affiliation(s)
- S Heinhorst
- Department of Chemistry, University of Southern Mississippi, Hattiesburg, Mississippi 39406
| | | | | |
Collapse
|
41
|
|
42
|
Norman MA, Liebl RA, Widholm JM. Uptake and metabolism of clomazone in tolerant-soybean and susceptible-cotton photomixotrophic cell suspension cultures. PLANT PHYSIOLOGY 1990; 92:777-84. [PMID: 16667349 PMCID: PMC1062368 DOI: 10.1104/pp.92.3.777] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/09/2023]
Abstract
Studies were conducted to determine the uptake and metabolism of the pigment synthesis inhibiting herbicide clomazone in tolerant-soybean (Glycine max [L.] Merr. cv Corsoy) and susceptible-cotton (Gossypium hirsutum [L.] cv Stoneville 825) photomixotrophic cell suspensions. Soybean and cotton on a whole plant level are tolerant and susceptible to clomazone, respectively. Preliminary studies indicated that I(50) values for growth, chlorophyll (Chl), beta-carotene, and lutein were, respectively, >22, 14, 19, and 23 times greater for the soybean cell line (SB-M) 8 days after treatment (DAT) compared to the cotton cell line (COT-M) 16 DAT. Differences in [(14)C]clomazone uptake cannot account for selectivity since there were significantly greater levels of clomazone absorbed by the SB-M cells compared to the COT-M cells for each treatment. The percentage of absorbed clomazone converted to more polar metabolite(s) was significantly greater by the SB-M cells relative to COT-M cells at 6 and 24 hours after treatment, however, only small differences existed between the cell lines by 48 hours after treatment. Nearly identical levels of parental clomazone was recovered from both cell lines for all treatments. A pooled metabolite fraction isolated from SB-M cells had no effect on the leaf pigment content of susceptible velvetleaf (Abutilon theophrasti Medic.) or soybean seedlings. Conversely, a pooled metabolite fraction from COT-M cells reduced the leaf Chl content of velvetleaf. Soybean tolerance to clomazone appears to be due to differential metabolism (bioactivation) and/or differences at the site of action.
Collapse
Affiliation(s)
- M A Norman
- Department of Agronomy, University of Illinois, Urbana, Illinois 61801
| | | | | |
Collapse
|
43
|
Characterization of phytochrome-regulated gene expression in a photoautotrophic cell suspension: possible role for calmodulin. Mol Cell Biol 1990. [PMID: 2689868 DOI: 10.1128/mcb.9.11.4819] [Citation(s) in RCA: 36] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
A photoautotrophic suspension culture of soybeans was found to exhibit light-dependent expression of the genes encoding the major chlorophyll a- and b-binding protein (CAB). The expression was mediated by phytochrome, since it was induced by red light and reversed by far-red light. The maximal level as well as the kinetics of the induction were comparable between the suspension culture and soybean seedlings. Using this cell culture, we addressed the question of whether a calcium- and/or calmodulin-mediated step is involved in the signal transduction process between phytochrome and CAB expression. We found that W-7, a potent calmodulin antagonist, severely attenuated the induction of CAB mRNA by light, whereas W-5, a weak calmodulin antagonist, had little effect. Control experiments demonstrated that W-7 treatment did not block the induction of hsp-75 by heat shock. The addition of ionomycin, a calcium ionophore, induced a low level of CAB mRNA accumulation in the dark which could be further enhanced by light treatment. We propose that calmodulin activation by light is necessary but not sufficient to induce maximal CAB expression.
Collapse
|
44
|
Roeske CA, Widholm JM, Ogren WL. Photosynthetic Carbon Metabolism in Photoautotrophic Cell Suspension Cultures Grown at Low and High CO(2). PLANT PHYSIOLOGY 1989; 91:1512-9. [PMID: 16667210 PMCID: PMC1062215 DOI: 10.1104/pp.91.4.1512] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/09/2023]
Abstract
Photosynthetic carbon metabolism was characterized in four photoautotrophic cell suspension cultures. There was no apparent difference between two soybean (Glycine max) and one cotton (Gossypium hirsutum) cell line which required 5% CO(2) for growth, and a unique cotton cell line that grows at ambient CO(2) (660 microliters per liter). Photosynthetic characteristics in all four lines were more like C(3) mesophyll leaf cells than the cell suspension cultures previously studied. The pattern of (14)C-labeling reflected the high ratio of ribulosebisphosphate carboxylase to phosphoenolpyruvate carboxylase activity and showed that CO(2) fixation occurred primarily by the C(3) pathway. Photorespiration occurred at 330 microliters per liter CO(2), 21% O(2) as indicated by the synthesis of high levels of (14)C-labeled glycine and serine in a pulse-chase experiment and by oxygen inhibition of CO(2) fixation. Short-term CO(2) fixation in the presence and absence of carbonic anhydrase showed CO(2), not HCO(3) (-), to be the main source of inorganic carbon taken up by the low CO(2)-requiring cotton cells. The cells did not have a CO(2)-concentrating mechanism as indicated by silicone oil centrifugation experiments. Carbonic anhydrase was absent in the low CO(2)-requiring cotton cells, present in the high CO(2)-requiring soybean cell lines, and absent in other high CO(2) cell lines examined. Thus, the presence of carbonic anhydrase is not an essential requirement for photoautotrophy in cell suspension cultures which grow at either high or low CO(2) concentrations.
Collapse
Affiliation(s)
- C A Roeske
- Department of Plant Biology, University of Illinois at Urbana-Champaign, Illinois 61801
| | | | | |
Collapse
|
45
|
Lam E, Benedyk M, Chua NH. Characterization of phytochrome-regulated gene expression in a photoautotrophic cell suspension: possible role for calmodulin. Mol Cell Biol 1989; 9:4819-23. [PMID: 2689868 PMCID: PMC363631 DOI: 10.1128/mcb.9.11.4819-4823.1989] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023] Open
Abstract
A photoautotrophic suspension culture of soybeans was found to exhibit light-dependent expression of the genes encoding the major chlorophyll a- and b-binding protein (CAB). The expression was mediated by phytochrome, since it was induced by red light and reversed by far-red light. The maximal level as well as the kinetics of the induction were comparable between the suspension culture and soybean seedlings. Using this cell culture, we addressed the question of whether a calcium- and/or calmodulin-mediated step is involved in the signal transduction process between phytochrome and CAB expression. We found that W-7, a potent calmodulin antagonist, severely attenuated the induction of CAB mRNA by light, whereas W-5, a weak calmodulin antagonist, had little effect. Control experiments demonstrated that W-7 treatment did not block the induction of hsp-75 by heat shock. The addition of ionomycin, a calcium ionophore, induced a low level of CAB mRNA accumulation in the dark which could be further enhanced by light treatment. We propose that calmodulin activation by light is necessary but not sufficient to induce maximal CAB expression.
Collapse
Affiliation(s)
- E Lam
- Laboratory of Plant Molecular Biology, Rockefeller University, New York, New York 10021
| | | | | |
Collapse
|
46
|
Carrier P, Chagvardieff P, Tapie P. Comparison of the Oxygen Exchange between Photosynthetic Cell Suspensions and Detached Leaves of Euphorbia characias L. PLANT PHYSIOLOGY 1989; 91:1075-9. [PMID: 16667114 PMCID: PMC1062121 DOI: 10.1104/pp.91.3.1075] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/09/2023]
Abstract
Using a mass-spectrometric (16)O(2)/(18)O(2)-isotope technique, we compared the nature and the relative importance of oxygen exchange in photomixotrophic (PM) and photoautotrophic (PA) suspensions of Euphorbia characias L. with those in intact leaves of the same species. Young and mature leaves, dividing and nondividing cell suspensions were characterized in short-term experiments. On chlorophyll basis, the gross photosynthetic activities at CO(2) saturating concentration of PA and PM suspensions varied little from those of leaves. On dry weight basis, gross photosynthesis of PA suspensions was equal to that of leaves because of their similar chlorophyll content. This was not the case in PM suspensions where gross photosynthesis was lower and largely varied during the growth cycle. The CO(2) compensation point of PA cells (155-265 parts per million) was much higher than that of leaves (50-80 ppm). Oxygen uptakes were analyzed in terms of mitochondrial respiration, photorespiration and light stimulation of oxygen uptake (LSOU), often identified to Mehlertype reactions. In PA and PM suspensions, mitochondrial respiration rates were higher than in leaves by a factor of 1.5 to 4.5. In PM suspensions, photorespiration and LSOU were observed only in nondividing cells. Photorespiration and LSOU rates were comparable in PA suspensions and leaves. Our results demonstrate that photorespiration of PA suspensions has not been affected by the 2% CO(2) concentration imposed during 2 years of culture.
Collapse
Affiliation(s)
- P Carrier
- Association pour la Recherche en Bioénergie Solaire, C.E.N. Cadarache, 13108 Saint-Paul lez Durance, Cedex, France
| | | | | |
Collapse
|
47
|
Xu C, Rogers SM, Goldstein C, Widholm JM. Fluorescence characteristics of photoautotrophic soybean cells. PHOTOSYNTHESIS RESEARCH 1989; 21:93-106. [PMID: 24424528 DOI: 10.1007/bf00033363] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/03/1988] [Accepted: 10/10/1988] [Indexed: 06/03/2023]
Abstract
We report here the first measurements on chlorophyll (Chl) a fluorescence characteristics of photoautotrophic soybean cells (cell lines SB-P and SBI-P). The cell fluorescence is free from severe distortion problems encountered in higher plant leaves. Chl a fluorescence spectra at 77 K show, after correction for the spectral sensitivity of the photomultiplier and the emission monochromator, peaks at 688, 696 and 745 nm, representing antenna systems of photosystem II-CP43 and CP47, and photosystem I, respectively. Calculations, based on the complementary area over the Chl a fluorescence induction curve, indicated a ratio of 6 of the mobile plastoquinone (including QB) to the primary stable electron acceptor, the bound plastoquinone QA. A ratio of one between the secondary stable electron acceptor, bound plastoquinone QB, and its reduced form QB (-) was obtained by using a double flash technique. Owing to this ratio, the flash number dependence of the Chl a fluorescence showed a distinct period of four, implying a close relationship to the 'S' state of the oxygen evolution mechanism. Analysis of the QA (-) reoxidation kinetics showed (1) the halftime of each of the major decay components (∼ 300 μs fast and ∼ 30 ms slow) increases with the increase of diuron and atrazine concentrations; and (2) the amplitudes of the fast and the slow components change in a complementary fashion, the fast component disappearing at high concentrations of the inhibitors. This implies that the inhibitors used are able to totally displace QB. In intact soybean cells, the relative amplitude of the 30 ms to 300 μs component is higher (40:60) than that in spinach chloroplasts (30:70), implying a larger contribution of the centers with unbound QB. SB-P and SBI-P soybean cells display a slightly different sensitivity of QA (-) decay to inhibitors.
Collapse
Affiliation(s)
- C Xu
- Department of Physiology and Biophysics, University of Illinois at Urbana-Champaign, 61801, IL, USA
| | | | | | | |
Collapse
|
48
|
Xu C, Blair LC, Rogers SM, Widholm JM. Characteristics of Five New Photoautotrophic Suspension Cultures Including Two Amaranthus Species and a Cotton Strain Growing on Ambient CO(2) Levels. PLANT PHYSIOLOGY 1988; 88:1297-302. [PMID: 16666458 PMCID: PMC1055756 DOI: 10.1104/pp.88.4.1297] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/09/2023]
Abstract
Suspension cultures of cotton (Gossypium hirsutum), Amaranthus cruentus, A. powellii, Datura innoxia, and a Nicotiana tabacum-N. glutinosa fusion hybrid were adapted to grow photoautotrophically under continuous light. The cotton strain grew with an atmosphere of ambient CO(2) (about 0.06 to 0.07% in the culture room) while the other strains required elevated CO(2) levels (5%). Photoautotrophy was indicated by the requirement for CO(2) and for light for growth. The strains grew with doubling times near 14 days and had from 50 to 600 micrograms of chlorophyll per gram of fresh weight. The cells grew in small to moderate sized clumps with cell sizes from 40 to 70 micrometers (diameter). Like most photoautotrophic cultures described so far the ribulose 1,5-bisphosphate carboxylase (RuBPcase) activity levels were well below those of mature leaves. The phosphoenolpyruvate carboxylase levels were not elevated in the C(4)Amaranthus species. The cells showed high dark respiration rates and had lower net CO(2) fixation under high O(2) conditions. Dark CO(2) fixation rates ranged from near 10 to 30% of that in light. Fluorescence emission spectra measurements show that the cell antenna pigments systems of the four strains examined are similar to that of chloroplasts of green plants. The cotton strain which was capable of growth under ambient CO(2) conditions showed the unique properties of a high RuBPcase activation level in ambient CO(2) and a stable ability to show net CO(2) fixation in 21% O(2) conditions.
Collapse
Affiliation(s)
- C Xu
- Department of Physiology and Biophysics and Plant Biology, University of Illinois, Urbana, Illinois 61801
| | | | | | | |
Collapse
|
49
|
Spilatro SR, Anderson JM. Carbohydrate Metabolism and Activity of Pyrophosphate: Fructose-6-Phosphate Phosphotransferase in Photosynthetic Soybean (Glycine max, Merr.) Suspension Cells. PLANT PHYSIOLOGY 1988; 88:862-8. [PMID: 16666398 PMCID: PMC1055675 DOI: 10.1104/pp.88.3.862] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/09/2023]
Abstract
Activity of pyrophosphate:fructose-6-phosphate phosphotransferase (PFP) was investigated in relation to carbohydrate metabolism and physiological growth stage in mixotrophic soybean (Glycine max Merr.) suspension cells. In the presence of exogenous sugars, log phase growth occurred and the cells displayed mixotrophic metabolism. During this stage, photosynthetic oxygen evolution was depressed and sugars were assimilated from the medium. Upon depletion of medium sugar, oxygen evolution and chlorophyll content increased, and cells entered stationary phase. Activities of various enzymes of glycolysis and sucrose metabolism, including PFP, sucrose synthase, fructokinase, glucokinase, UDP-glucose pyrophosphorylase, and fructose-1,6-bisphosphatase, changed as the cells went from log to stationary phases of growth. The largest change occurred in the activity of PFP, which was three-fold higher in log phase cells. PFP activity increased in cells grown on media initially containing sucrose, glucose, or fructose and began to decline when sugar in the medium was depleted. Western blots probed with antibody specific to the -subunit of potato PFP revealed a single 56 kilodalton immunoreactive band that changed in intensity during the growth cycle in association with changes in total PFP activity. The level of fructose-2,6-bisphosphate, an activator of the soybean PFP, increased during the first 24 hours after cell transfer and returned to the stationary phase level prior to the increase in PFP activity. Throughout the growth cycle, the calculated in vivo cytosolic concentration of fructose-2,6-bisphosphate exceeded by more than two orders of magnitude the previously reported activation coefficient (K(a)) for soybean PFP. These results indicate that metabolism of exogenously supplied sugars by these cells involves a PFP-dependent step that is not coupled directly to sucrose utilization. Activity of this pathway appears to be controlled by changes in the level of PFP, rather than changes in the total cytosolic level of fructose-2,6-bisphosphate.
Collapse
Affiliation(s)
- S R Spilatro
- United States Department of Agriculture, Agriculture Research Service, North Carolina State University, North Carolina 27695-7631
| | | |
Collapse
|
50
|
Blair LC, Chastain CJ, Widholm JM. Initiation and characterization of a cotton (Gossypium hirsutum L.) photoautotrophic cell suspension culture. PLANT CELL REPORTS 1988; 7:266-269. [PMID: 24241763 DOI: 10.1007/bf00272539] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/15/1988] [Revised: 04/27/1988] [Indexed: 06/02/2023]
Abstract
A heterotrophic cotton (Gossypium hirsutum L. cv. Stoneville 825) cell suspension culture was adapted to grow photoautotrophically. After two years in continuous photoautotrophic culture at 5% CO2 (balance air), the maximum growth rate of the photoautotrophic cell line was a 400% fresh weight increase in eight days. The Chl concentration was approximately 500 μg per g fresh weight.Elevated CO2 (1%-5%) was required for culture growth, while the ambient air of the culture room (600 to 700 ul CO2 1(-1)) or darkness were lethal. The cell line had no net photosynthesis at 350 ul 1(-1) CO2, 2% O2, and dark respiration ranged from 29 to 44 μmol CO2 mg(-1) Chl h(-1). Photosynthesis was inhibited by O2. The approximate 1:1 ratio of ribulose 1,5-bisphosphate carboxylase (RuBPcase) to phosphoenolpyruvate carboxylase (PEPcase) (normally about 6:1 in mature leaves of C3 plants) was due to low RuBPcase activity relative to that of C3 leaves, not to high PEPcase activity. The PEPcase activity per unit Chl in the cell line was identical to that of spinach leaves, while the RuBPcase activity was only 15% of the spinach leaf RuBPcase activity. RuBPcase activity in the photoautotrophic cells was not limited by a lack of activation in vivo, since the enzyme in a rapidly prepared cell extract was 73% activated. No evidence of enzyme inactivation by secondary compounds in the cells was found as can be found with cotton leaves. Low RuBPcase activity and high respiration rates are most likely important factors in the low photosynthetic efficiency of the cells at ambient CO2.
Collapse
Affiliation(s)
- L C Blair
- Department of Agronomy, University of Illinois, 1102 South Goodwin, 61801, Urbana, IL, USA
| | | | | |
Collapse
|