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Lu Y, Cheng K, Tang H, Li J, Zhang C, Zhu H. The role of Rab GTPase in Plant development and stress. J Plant Physiol 2024; 296:154239. [PMID: 38574493 DOI: 10.1016/j.jplph.2024.154239] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/21/2024] [Revised: 03/26/2024] [Accepted: 03/26/2024] [Indexed: 04/06/2024]
Abstract
Small GTPase is a type of crucial regulator in eukaryotes. It acts as a molecular switch by binding with GTP and GDP in cytoplasm, affecting various cellular processes. Small GTPase were divided into five subfamilies based on sequence, structure and function: Ras, Rho, Rab, Arf/Sar and Ran, with Rab being the largest subfamily. Members of the Rab subfamily play an important role in regulating complex vesicle transport and microtubule system activity. Plant cells are composed of various membrane-bound organelles, and vesicle trafficking is fundamental to the existence of plants. At present, the function of some Rab members, such as RabA1a, RabD2b/c and RabF2, has been well characterized in plants. This review summarizes the role of Rab GTPase in regulating plant tip growth, morphogenesis, fruit ripening and stress response, and briefly describes the regulatory mechanisms involved. It provides a reference for further alleviating environmental stress, improving plant resistance and even improving fruit quality.
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Affiliation(s)
- Yao Lu
- The College of Food Science and Nutritional Engineering, China Agricultural University, Beijing, 100083, China.
| | - Ke Cheng
- The College of Food Science and Nutritional Engineering, China Agricultural University, Beijing, 100083, China.
| | - Hui Tang
- The College of Food Science and Nutritional Engineering, China Agricultural University, Beijing, 100083, China.
| | - Jinyan Li
- The College of Food Science and Nutritional Engineering, China Agricultural University, Beijing, 100083, China.
| | - Chunjiao Zhang
- Supervision, Inspection & Testing Center of Agricultural Products Quality, Ministry of Agriculture and Rural Affairs, Beijing, 100083, China.
| | - Hongliang Zhu
- The College of Food Science and Nutritional Engineering, China Agricultural University, Beijing, 100083, China.
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2
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Chocano-Coralla EJ, Vidali L. Myosin XI, a model of its conserved role in plant cell tip growth. Biochem Soc Trans 2024; 52:505-515. [PMID: 38629612 DOI: 10.1042/bst20220783] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2023] [Revised: 03/21/2024] [Accepted: 03/26/2024] [Indexed: 04/25/2024]
Abstract
In eukaryotic cells, organelle and vesicle transport, positioning, and interactions play crucial roles in cytoplasmic organization and function. These processes are governed by intracellular trafficking mechanisms. At the core of that trafficking, the cytoskeleton and directional transport by motor proteins stand out as its key regulators. Plant cell tip growth is a well-studied example of cytoplasm organization by polarization. This polarization, essential for the cell's function, is driven by the cytoskeleton and its associated motors. This review will focus on myosin XI, a molecular motor critical for vesicle trafficking and polarized plant cell growth. We will center our discussion on recent data from the moss Physcomitrium patens and the liverwort Marchantia polymorpha. The biochemical properties and structure of myosin XI in various plant species are discussed, highlighting functional conservation across species. We further explore this conservation of myosin XI function in the process of vesicle transport in tip-growing cells. Existing evidence indicates that myosin XI actively organizes actin filaments in tip-growing cells by a mechanism based on vesicle clustering at their tips. A hypothetical model is presented to explain the essential function of myosin XI in polarized plant cell growth based on vesicle clustering at the tip. The review also provides insight into the in vivo localization and dynamics of myosin XI, emphasizing its role in cytosolic calcium regulation, which influences the polymerization of F-actin. Lastly, we touch upon the need for additional research to elucidate the regulation of myosin function.
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Affiliation(s)
| | - Luis Vidali
- Department of Biology and Biotechnology, Worcester Polytechnic Institute, Worcester, MA, U.S.A
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3
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Ochiai KK, Hanawa D, Ogawa HA, Tanaka H, Uesaka K, Edzuka T, Shirae-Kurabayashi M, Toyoda A, Itoh T, Goshima G. Genome sequence and cell biological toolbox of the highly regenerative, coenocytic green feather alga Bryopsis. Plant J 2024. [PMID: 38642374 DOI: 10.1111/tpj.16764] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/11/2023] [Revised: 02/10/2024] [Accepted: 03/27/2024] [Indexed: 04/22/2024]
Abstract
Green feather algae (Bryopsidales) undergo a unique life cycle in which a single cell repeatedly executes nuclear division without cytokinesis, resulting in the development of a thallus (>100 mm) with characteristic morphology called coenocyte. Bryopsis is a representative coenocytic alga that has exceptionally high regeneration ability: extruded cytoplasm aggregates rapidly in seawater, leading to the formation of protoplasts. However, the genetic basis of the unique cell biology of Bryopsis remains poorly understood. Here, we present a high-quality assembly and annotation of the nuclear genome of Bryopsis sp. (90.7 Mbp, 27 contigs, N50 = 6.7 Mbp, 14 034 protein-coding genes). Comparative genomic analyses indicate that the genes encoding BPL-1/Bryohealin, the aggregation-promoting lectin, are heavily duplicated in Bryopsis, whereas homologous genes are absent in other ulvophyceans, suggesting the basis of regeneration capability of Bryopsis. Bryopsis sp. possesses >30 kinesins but only a single myosin, which differs from other green algae that have multiple types of myosin genes. Consistent with this biased motor toolkit, we observed that the bidirectional motility of chloroplasts in the cytoplasm was dependent on microtubules but not actin in Bryopsis sp. Most genes required for cytokinesis in plants are present in Bryopsis, including those in the SNARE or kinesin superfamily. Nevertheless, a kinesin crucial for cytokinesis initiation in plants (NACK/Kinesin-7II) is hardly expressed in the coenocytic part of the thallus, possibly underlying the lack of cytokinesis in this portion. The present genome sequence lays the foundation for experimental biology in coenocytic macroalgae.
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Affiliation(s)
- Kanta K Ochiai
- Sugashima Marine Biological Laboratory, Graduate School of Science, Nagoya University, Toba, 517-0004, Japan
| | - Daiki Hanawa
- School of Life Science and Technology, Tokyo Institute of Technology, Meguro-ku, Tokyo, 152-8550, Japan
| | - Harumi A Ogawa
- Sugashima Marine Biological Laboratory, Graduate School of Science, Nagoya University, Toba, 517-0004, Japan
| | - Hiroyuki Tanaka
- School of Life Science and Technology, Tokyo Institute of Technology, Meguro-ku, Tokyo, 152-8550, Japan
| | - Kazuma Uesaka
- Centre for Gene Research, Nagoya University, Nagoya, 464-8602, Japan
| | - Tomoya Edzuka
- Sugashima Marine Biological Laboratory, Graduate School of Science, Nagoya University, Toba, 517-0004, Japan
| | - Maki Shirae-Kurabayashi
- Sugashima Marine Biological Laboratory, Graduate School of Science, Nagoya University, Toba, 517-0004, Japan
| | - Atsushi Toyoda
- Comparative Genomics Laboratory, National Institute of Genetics, Mishima, Shizuoka, 411-8540, Japan
- Advanced Genomics Center, National Institute of Genetics, Mishima, Shizuoka, 411-8540, Japan
| | - Takehiko Itoh
- School of Life Science and Technology, Tokyo Institute of Technology, Meguro-ku, Tokyo, 152-8550, Japan
| | - Gohta Goshima
- Sugashima Marine Biological Laboratory, Graduate School of Science, Nagoya University, Toba, 517-0004, Japan
- Department of Biological Science, Graduate School of Science, Nagoya University, Nagoya, 464-8602, Japan
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Qian D, Li T, Zheng C, Niu Y, Niu Y, Li C, Wang M, Yang Y, An L, Xiang Y. Actin-depolymerizing factors 8 and 11 promote root hair elongation at high pH. Plant Commun 2024; 5:100787. [PMID: 38158655 PMCID: PMC10943588 DOI: 10.1016/j.xplc.2023.100787] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/10/2023] [Revised: 12/26/2023] [Accepted: 12/26/2023] [Indexed: 01/03/2024]
Abstract
A root hair is a polarly elongated single-celled structure that derives from a root epidermal cell and functions in uptake of water and nutrients from the surrounding environment. Previous reports have demonstrated that short periods of high pH inhibit root hair extension; but the effects of long-term high-pH treatment on root hair growth are still unclear. Here, we report that the duration of root hair elongation is significantly prolonged with increasing external pH, which counteracts the effect of decreasing root hair elongation rate and ultimately produces longer root hairs, whereas loss of actin-depolymerizing factor 8 and 11 (ADF8/11) function causes shortening of root hair length at high pH (pH 7.4). Accumulation of ADF8/11 at the tips of root hairs is inhibited by high pH, and increasing environmental pH affects the actin filament (F-actin) meshwork at the root hair tip. At high pH, the tip-focused F-actin meshwork is absent in root hairs of the adf8/11 mutant, actin filaments are disordered at the adf8/11 root hair tips, and actin turnover is attenuated. Secretory and recycling vesicles do not aggregate in the apical region of adf8/11 root hairs at high pH. Together, our results suggest that, under long-term exposure to high extracellular pH, ADF8/11 may establish and maintain the tip-focused F-actin meshwork to regulate polar trafficking of secretory/recycling vesicles at the root hair tips, thereby promoting root hair elongation.
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Affiliation(s)
- Dong Qian
- Ministry of Education Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, Lanzhou 730000, China
| | - Tian Li
- Ministry of Education Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, Lanzhou 730000, China
| | - Chen Zheng
- Ministry of Education Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, Lanzhou 730000, China
| | - Yue Niu
- Ministry of Education Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, Lanzhou 730000, China
| | - Yingzhi Niu
- Ministry of Education Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, Lanzhou 730000, China
| | - Chengying Li
- Ministry of Education Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, Lanzhou 730000, China
| | - Muxuan Wang
- Ministry of Education Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, Lanzhou 730000, China
| | - Yang Yang
- Ministry of Education Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, Lanzhou 730000, China
| | - Lizhe An
- Ministry of Education Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, Lanzhou 730000, China
| | - Yun Xiang
- Ministry of Education Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, Lanzhou 730000, China.
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Zhang R, Xu Y, Yi R, Shen J, Huang S. Actin cytoskeleton in the control of vesicle transport, cytoplasmic organization, and pollen tube tip growth. Plant Physiol 2023; 193:9-25. [PMID: 37002825 DOI: 10.1093/plphys/kiad203] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/04/2023] [Revised: 03/08/2023] [Accepted: 03/17/2023] [Indexed: 06/19/2023]
Abstract
Pollen tubes extend rapidly via tip growth. This process depends on a dynamic actin cytoskeleton, which has been implicated in controlling organelle movements, cytoplasmic streaming, vesicle trafficking, and cytoplasm organization in pollen tubes. In this update review, we describe the progress in understanding the organization and regulation of the actin cytoskeleton and the function of the actin cytoskeleton in controlling vesicle traffic and cytoplasmic organization in pollen tubes. We also discuss the interplay between ion gradients and the actin cytoskeleton that regulates the spatial arrangement and dynamics of actin filaments and the organization of the cytoplasm in pollen tubes. Finally, we describe several signaling components that regulate actin dynamics in pollen tubes.
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Affiliation(s)
- Ruihui Zhang
- National Key Laboratory of Crop Genetic Improvement, College of Life Science and Technology, Huazhong Agricultural University, Wuhan 430070, China
| | - Yanan Xu
- Center for Plant Biology, School of Life Sciences, Tsinghua University, Beijing 100084, China
| | - Ran Yi
- Center for Plant Biology, School of Life Sciences, Tsinghua University, Beijing 100084, China
| | - Jiangfeng Shen
- Center for Plant Biology, School of Life Sciences, Tsinghua University, Beijing 100084, China
| | - Shanjin Huang
- Center for Plant Biology, School of Life Sciences, Tsinghua University, Beijing 100084, China
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Nan Q, Liang H, Mendoza J, Liu L, Fulzele A, Wright A, Bennett EJ, Rasmussen CG, Facette MR. The OPAQUE1/DISCORDIA2 myosin XI is required for phragmoplast guidance during asymmetric cell division in maize. Plant Cell 2023; 35:2678-2693. [PMID: 37017144 PMCID: PMC10291028 DOI: 10.1093/plcell/koad099] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/08/2022] [Revised: 02/23/2023] [Accepted: 02/28/2023] [Indexed: 06/19/2023]
Abstract
Formative asymmetric divisions produce cells with different fates and are critical for development. We show the maize (Zea mays) myosin XI protein, OPAQUE1 (O1), is necessary for asymmetric divisions during maize stomatal development. We analyzed stomatal precursor cells before and during asymmetric division to determine why o1 mutants have abnormal division planes. Cell polarization and nuclear positioning occur normally in the o1 mutant, and the future site of division is correctly specified. The defect in o1 becomes apparent during late cytokinesis, when the phragmoplast forms the nascent cell plate. Initial phragmoplast guidance in o1 is normal; however, as phragmoplast expansion continues o1 phragmoplasts become misguided. To understand how O1 contributes to phragmoplast guidance, we identified O1-interacting proteins. Maize kinesins related to the Arabidopsis thaliana division site markers PHRAGMOPLAST ORIENTING KINESINs (POKs), which are also required for correct phragmoplast guidance, physically interact with O1. We propose that different myosins are important at multiple steps of phragmoplast expansion, and the O1 actin motor and POK-like microtubule motors work together to ensure correct late-stage phragmoplast guidance.
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Affiliation(s)
- Qiong Nan
- Department of Biology, University of Massachusetts, Amherst, MA 01003, USA
| | - Hong Liang
- Department of Botany and Plant Sciences, University of California, Riverside, CA 92521, USA
| | - Janette Mendoza
- Department of Botany, University of New Mexico, Albuquerque, NM 87131, USA
| | - Le Liu
- Department of Biology, University of Massachusetts, Amherst, MA 01003, USA
| | - Amit Fulzele
- Division of Biological Sciences, University of California, Riverside, CA 92093, USA
| | - Amanda Wright
- Department of Biological Sciences, University of North Texas, Denton, TX 76203, USA
| | - Eric J Bennett
- Division of Biological Sciences, University of California, Riverside, CA 92093, USA
| | - Carolyn G Rasmussen
- Department of Botany and Plant Sciences, University of California, Riverside, CA 92521, USA
| | - Michelle R Facette
- Department of Biology, University of Massachusetts, Amherst, MA 01003, USA
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Uyehara AN, Rasmussen CG. Redundant mechanisms in division plane positioning. Eur J Cell Biol 2023; 102:151308. [PMID: 36921356 DOI: 10.1016/j.ejcb.2023.151308] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/26/2023] [Revised: 03/05/2023] [Accepted: 03/11/2023] [Indexed: 03/18/2023] Open
Abstract
Redundancies in plant cell division contribute to the maintenance of proper division plane orientation. Here we highlight three types of redundancy: 1) Temporal redundancy, or correction of earlier defects that results in proper final positioning, 2) Genetic redundancy, or functional compensation by homologous genes, and 3) Synthetic redundancy, or redundancy within or between pathways that contribute to proper division plane orientation. Understanding the types of redundant mechanisms involved provides insight into current models of division plane orientation and opens up new avenues for exploration.
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Affiliation(s)
- Aimee N Uyehara
- Department of Botany and Plant Sciences, Center for Plant Cell Biology, University of California, Riverside, USA
| | - Carolyn G Rasmussen
- Department of Botany and Plant Sciences, Center for Plant Cell Biology, University of California, Riverside, USA.
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Yoshida MW, Kozgunova E. Microfluidic Device for High-Resolution Cytoskeleton Imaging and Washout Assays in Physcomitrium (Physcomitrella) patens. Methods Mol Biol 2023; 2604:143-158. [PMID: 36773231 DOI: 10.1007/978-1-0716-2867-6_11] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/12/2023]
Abstract
Visualizing cytoskeleton dynamics at high spatiotemporal resolution provides valuable insights into the way the dynamics change as well as its interactions with multiple proteins in order to maintain cellular function. Oblique illumination fluorescent microscopy is a popular technique to image cellular events localized near the plasma membrane. In this chapter, we provide detailed protocols for high-resolution cytoskeleton imaging using protonema and gametophore cells of the moss Physcomitrella (Physcomitrium patens) in the microfluidic device. These include preparation of the polydimethylsiloxane (PDMS) device, culture of moss cells, and both short- and long-term oblique illumination fluorescent microscopy. We also describe how to introduce to, and wash out from, the device chemical compounds, such as microtubule-disrupting drugs, during live-cell imaging.
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Affiliation(s)
- Mari W Yoshida
- Division of Biological Science, Graduate School of Science, Nagoya University, Nagoya, Aichi, Japan
| | - Elena Kozgunova
- Division of Biological Science, Graduate School of Science, Nagoya University, Nagoya, Aichi, Japan. .,Institute for Advanced Research, Nagoya University, Nagoya, Japan.
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Kawamoto N, Morita MT. Gravity sensing and responses in the coordination of the shoot gravitropic setpoint angle. New Phytol 2022; 236:1637-1654. [PMID: 36089891 PMCID: PMC9828789 DOI: 10.1111/nph.18474] [Citation(s) in RCA: 13] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/27/2022] [Accepted: 08/13/2022] [Indexed: 06/15/2023]
Abstract
Gravity is one of the fundamental environmental cues that affect plant development. Indeed, the plant architecture in the shoots and roots is modulated by gravity. Stems grow vertically upward, whereas lateral organs, such as the lateral branches in shoots, tend to grow at a specific angle according to a gravity vector known as the gravitropic setpoint angle (GSA). During this process, gravity is sensed in specialised gravity-sensing cells named statocytes, which convert gravity information into biochemical signals, leading to asymmetric auxin distribution and driving asymmetric cell division/expansion in the organs to achieve gravitropism. As a hypothetical offset mechanism against gravitropism to determine the GSA, the anti-gravitropic offset (AGO) has been proposed. According to this concept, the GSA is a balance of two antagonistic growth components, that is gravitropism and the AGO. Although the nature of the AGO has not been clarified, studies have suggested that gravitropism and the AGO share a common gravity-sensing mechanism in statocytes. This review discusses the molecular mechanisms underlying gravitropism as well as the hypothetical AGO in the control of the GSA.
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Affiliation(s)
- Nozomi Kawamoto
- Division of Plant Environmental ResponsesNational Institute for Basic BiologyMyodaijiOkazaki444‐8556Japan
| | - Miyo Terao Morita
- Division of Plant Environmental ResponsesNational Institute for Basic BiologyMyodaijiOkazaki444‐8556Japan
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Hajibarat Z, Saidi A, Gorji AM, Zeinalabedini M, Ghaffari MR, Hajibarat Z, Nasrollahi A. Identification of myosin genes and their expression in response to biotic (PVY, PVX, PVS, and PVA) and abiotic (Drought, Heat, Cold, and High-light) stress conditions in potato. Mol Biol Rep 2022; 49:11983-11996. [PMID: 36271979 DOI: 10.1007/s11033-022-08007-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2022] [Accepted: 10/04/2022] [Indexed: 10/24/2022]
Abstract
BACKGROUND Plant organelles are highly motile where their movement is significant for fast distribution of material around the cell, facilitation of the plant's ability to respond to abiotic and biotic signals, and for appropriate growth. Abiotic and biotic stresses are among the major factors limiting crop yields, and biological membranes are the first target of these stresses. Plants utilize adaptive mechanisms namely myosin to repair injured membranes following exposure to abiotic and biotic stresses. OBJECTIVE Due to the economic importance and cultivation of potato grown under abiotic and biotic stress prone areas, identification and characterization of myosin family members in potato were performed in the present research. METHODS To identify the myosin genes in potato, we performed genome-wide analysis of myosin genes in the S. tuberosum genome using the phytozome. All putative sequences were approved with the interproscan. Bioinformatics analysis was conducted using phylogenetic tree, gene structure, cis-regulatory elements, protein-protein interaction, and gene expression. RESULT The majority of the cell machinery contain actin cytoskeleton and myosins, where motility of organelles are dependent on them. Homology-based analysis was applied to determine seven myosin genes in the potato genome. The members of myosin could be categorized into two groups (XI and VIII). Some of myosin proteins were sub-cellularly located in the nucleus containing 71.5% of myosin proteins and other myosin proteins were localized in the mitochondria, plasma-membrane, and cytoplasm. Determination of co-expressed network, promoter analysis, and gene structure were also performed and gene expression pattern of each gene was surveyed. Number of introns in the gene family members varied from 1 to 39. Gene expression analysis demonstrated that StMyoXI-B and StMyoVIII-2 had the highest transcripts, induced by biotic and abiotic stresses in all three tissues of stem, root, and leaves, respectively. Overall, different cis-elements including abiotic and biotic responsive, hormonal responsive, light responsive, defense responsive elements were found in the myosin promoter sequences. Among the cis-elements, the MYB, G-box, ABRE, JA, and SA contributed the most in the plant growth and development, and in response to abiotic and biotic stress conditions. CONCLUSION Our results showed that myosin genes can be utilized in breeding programs and genetic engineering of plants with the aim of increasing tolerance to abiotic and biotic stresses, especially to viral stresses such as PVY, PVX, PVA, PVS, high light, drought, cold and heat.
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Affiliation(s)
- Zahra Hajibarat
- Department of Plant Sciences and Biotechnology, Faculty of Life Sciences and Biotechnology, Shahid Beheshti University, Tehran, Iran
| | - Abbas Saidi
- Department of Plant Sciences and Biotechnology, Faculty of Life Sciences and Biotechnology, Shahid Beheshti University, Tehran, Iran.
| | - Ahmad Mosuapour Gorji
- Department of Vegetable Research, Seed and Plant Improvement Institute (SPII), Agricultural Research, Education and Extension Organization (AREEO), Karaj, Iran
| | - Mehrshad Zeinalabedini
- Agricultural Biotechnology Research Institute of Iran, Agricultural Research, Education and Extension Organization (AREEO), Karaj, Iran
| | - Mohammad Reza Ghaffari
- Agricultural Biotechnology Research Institute of Iran, Agricultural Research, Education and Extension Organization (AREEO), Karaj, Iran
| | - Zohreh Hajibarat
- Department of Plant Sciences and Biotechnology, Faculty of Life Sciences and Biotechnology, Shahid Beheshti University, Tehran, Iran
| | - Ali Nasrollahi
- Department of Vegetable Research, Seed and Plant Improvement Institute (SPII), Agricultural Research, Education and Extension Organization (AREEO), Karaj, Iran
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Dai L, Wang B, Wang T, Meyer EH, Kettel V, Hoffmann N, McFarlane HE, Li S, Wu X, Picard KL, Giavalisco P, Persson S, Zhang Y. The TOR complex controls ATP levels to regulate actin cytoskeleton dynamics in Arabidopsis. Proc Natl Acad Sci U S A 2022; 119:e2122969119. [PMID: 36095209 DOI: 10.1073/pnas.2122969119] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Cells must overcome energy shortage, and the ability to do so determines their fate. The ability of cells to coordinate their cellular activities and energy status is therefore important for all living organisms. One of the major energy drains in eukaryotic cells is the constant turnover of the actin cytoskeleton, which consumes ATP during the cycle of polymerization and depolymerization. We report that the TOR complex, a master regulatory hub that integrates cellular energy information to coordinate cell growth and metabolism, controls cellular ATP levels in plant cells. We further elucidate that low ATP levels cause reduced actin dynamics in plant cells. These findings provide insight into how plant cells handle low energy situations. Energy is essential for all cellular functions in a living organism. How cells coordinate their physiological processes with energy status and availability is thus an important question. The turnover of actin cytoskeleton between its monomeric and filamentous forms is a major energy drain in eukaryotic cells. However, how actin dynamics are regulated by ATP levels remain largely unknown in plant cells. Here, we observed that seedlings with impaired functions of target of rapamycin complex 1 (TORC1), either by mutation of the key component, RAPTOR1B, or inhibition of TOR activity by specific inhibitors, displayed reduced sensitivity to actin cytoskeleton disruptors compared to their controls. Consistently, actin filament dynamics, but not organization, were suppressed in TORC1-impaired cells. Subcellular localization analysis and quantification of ATP concentration demonstrated that RAPTOR1B localized at cytoplasm and mitochondria and that ATP levels were significantly reduced in TORC1-impaired plants. Further pharmacologic experiments showed that the inhibition of mitochondrial functions led to phenotypes mimicking those observed in raptor1b mutants at the level of both plant growth and actin dynamics. Exogenous feeding of adenine could partially restore ATP levels and actin dynamics in TORC1-deficient plants. Thus, these data support an important role for TORC1 in coordinating ATP homeostasis and actin dynamics in plant cells.
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Ginanjar EF, Teh OK, Fujita T. Characterisation of rapid alkalinisation factors in Physcomitrium patens reveals functional conservation in tip growth. New Phytol 2022; 233:2442-2457. [PMID: 34954833 DOI: 10.1111/nph.17942] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/15/2021] [Accepted: 12/17/2021] [Indexed: 06/14/2023]
Abstract
Small signalling peptides are key molecules for cell-to-cell communications in plants. The cysteine-rich signalling peptide, rapid alkalinisation factors (RALFs) family are involved in diverse developmental and stress responses and have expanded considerably during land plant evolution, implying neofunctionalisations in the RALF family. However, the ancestral roles of RALFs when land plant first acquired them remain unknown. Here, we functionally characterised two of the three RALFs in bryophyte Physcomitrium patens using loss-of-function mutants, overexpressors, as well as fluorescent proteins tagged reporter lines. We showed that PpRALF1 and PpRALF2 have overlapping functions in promoting protonema tip growth and elongation, showing a homologous function as the Arabidopsis RALF1 in promoting root hair tip growth. Although both PpRALFs are secreted to the plasma membrane on which PpRALF1 symmetrically localised, PpRALF2 showed a polarised localisation at the growing tip. Notably, proteolytic cleavage of PpRALF1 is necessary for its function. Our data reveal a possible evolutionary origin of the RALF functions and suggest that functional divergence of RALFs is essential to drive complex morphogenesis and to facilitate other novel processes in land plants.
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Affiliation(s)
| | - Ooi-Kock Teh
- Faculty of Science, Hokkaido University, Hokkaido, 060-0810, Japan
- Institute for the Advancement of Higher Education, Hokkaihdo University, Sapporo, 060-0817, Japan
- Institute of Plant and Microbial Biology, Academia Sinica, 128 Sec.2, Academia Rd, Nankang, Taipei, Taiwan
| | - Tomomichi Fujita
- Faculty of Science, Hokkaido University, Hokkaido, 060-0810, Japan
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Naramoto S, Hata Y, Fujita T, Kyozuka J. The bryophytes Physcomitrium patens and Marchantia polymorpha as model systems for studying evolutionary cell and developmental biology in plants. Plant Cell 2022; 34:228-246. [PMID: 34459922 PMCID: PMC8773975 DOI: 10.1093/plcell/koab218] [Citation(s) in RCA: 19] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/02/2021] [Accepted: 08/25/2021] [Indexed: 05/03/2023]
Abstract
Bryophytes are nonvascular spore-forming plants. Unlike in flowering plants, the gametophyte (haploid) generation of bryophytes dominates the sporophyte (diploid) generation. A comparison of bryophytes with flowering plants allows us to answer some fundamental questions raised in evolutionary cell and developmental biology. The moss Physcomitrium patens was the first bryophyte with a sequenced genome. Many cell and developmental studies have been conducted in this species using gene targeting by homologous recombination. The liverwort Marchantia polymorpha has recently emerged as an excellent model system with low genomic redundancy in most of its regulatory pathways. With the development of molecular genetic tools such as efficient genome editing, both P. patens and M. polymorpha have provided many valuable insights. Here, we review these advances with a special focus on polarity formation at the cell and tissue levels. We examine current knowledge regarding the cellular mechanisms of polarized cell elongation and cell division, including symmetric and asymmetric cell division. We also examine the role of polar auxin transport in mosses and liverworts. Finally, we discuss the future of evolutionary cell and developmental biological studies in plants.
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Affiliation(s)
| | - Yuki Hata
- Graduate School of Life Sciences, Tohoku University, Aoba-ku, Sendai 980-8577, Japan
| | - Tomomichi Fujita
- Department of Biological Sciences, Faculty of Science, Hokkaido University, Sapporo, Hokkaido 060-0810, Japan
| | - Junko Kyozuka
- Graduate School of Life Sciences, Tohoku University, Aoba-ku, Sendai 980-8577, Japan
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14
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Galotto G, Wisanpitayakorn P, Bibeau JP, Liu YC, Furt F, Pierce EC, Simpson PJ, Tüzel E, Vidali L. Myosin XI drives polarized growth by vesicle focusing and local enrichment of F-actin in Physcomitrium patens. Plant Physiol 2021; 187:2509-2529. [PMID: 34890463 PMCID: PMC8932395 DOI: 10.1093/plphys/kiab435] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/24/2021] [Accepted: 08/13/2021] [Indexed: 05/22/2023]
Abstract
In tip-growing plant cells, growth results from myosin XI and F-actin-mediated deposition of cell wall polysaccharides contained in secretory vesicles. Previous evidence showed that myosin XI anticipates F-actin accumulation at the cell's tip, suggesting a mechanism where vesicle clustering via myosin XI increases F-actin polymerization. To evaluate this model, we used a conditional loss-of-function strategy by generating moss (Physcomitrium patens) plants harboring a myosin XI temperature-sensitive allele. We found that loss of myosin XI function alters tip cell morphology, vacuolar homeostasis, and cell viability but not following F-actin depolymerization. Importantly, our conditional loss-of-function analysis shows that myosin XI focuses and directs vesicles at the tip of the cell, which induces formin-dependent F-actin polymerization, increasing F-actin's local concentration. Our findings support the role of myosin XI in vesicle focusing, possibly via clustering and F-actin organization, necessary for tip growth, and deepen our understanding of additional myosin XI functions.
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Affiliation(s)
- Giulia Galotto
- Department of Biology and Biotechnology, Worcester Polytechnic Institute, Worcester, Massachusetts 01609, USA
| | | | - Jeffrey P Bibeau
- Department of Biology and Biotechnology, Worcester Polytechnic Institute, Worcester, Massachusetts 01609, USA
| | - Yen-Chun Liu
- Department of Biology and Biotechnology, Worcester Polytechnic Institute, Worcester, Massachusetts 01609, USA
| | - Fabienne Furt
- Department of Biology and Biotechnology, Worcester Polytechnic Institute, Worcester, Massachusetts 01609, USA
| | - Ellen C Pierce
- Department of Biology and Biotechnology, Worcester Polytechnic Institute, Worcester, Massachusetts 01609, USA
| | - Parker J Simpson
- Bioinformatics and Computational Biology Program, Worcester Polytechnic Institute, Worcester, Massachusetts 01609, USA
| | - Erkan Tüzel
- Bioengineering Department, Temple University, Philadelphia, Pennsylvania 19122, USA
| | - Luis Vidali
- Department of Biology and Biotechnology, Worcester Polytechnic Institute, Worcester, Massachusetts 01609, USA
- Bioinformatics and Computational Biology Program, Worcester Polytechnic Institute, Worcester, Massachusetts 01609, USA
- Author for communication:
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15
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Zou M, Guo M, Zhou Z, Wang B, Pan Q, Li J, Zhou JM, Li J. MPK3- and MPK6-mediated VLN3 phosphorylation regulates actin dynamics during stomatal immunity in Arabidopsis. Nat Commun 2021; 12:6474. [PMID: 34753953 DOI: 10.1038/s41467-021-26827-2] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/03/2021] [Accepted: 10/22/2021] [Indexed: 12/28/2022] Open
Abstract
Upon perception of pathogens, plants can rapidly close their stomata to restrict pathogen entry into internal tissue, leading to stomatal immunity as one aspect of innate immune responses. The actin cytoskeleton is required for plant defense against microbial invaders. However, the precise functions of host actin during plant immunity remain largely unknown. Here, we report that Arabidopsis villin3 (VLN3) is critical for plant resistance to bacteria by regulating stomatal immunity. Our in vitro and in vivo phosphorylation assays show that VLN3 is a physiological substrate of two pathogen-responsive mitogen-activated protein kinases, MPK3/6. Quantitative analyses of actin dynamics and genetic studies reveal that VLN3 phosphorylation by MPK3/6 modulates actin remodeling to activate stomatal defense in Arabidopsis. Plants can rapidly close stomata to restrict pathogen entry into leaves. Here the authors show that phosphorylation of villin3 by mitogen-activated protein kinases modulates actin remodeling to activate stomatal defense in Arabidopsis.
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16
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Bibeau JP, Galotto G, Wu M, Tüzel E, Vidali L. Quantitative cell biology of tip growth in moss. Plant Mol Biol 2021; 107:227-244. [PMID: 33825083 PMCID: PMC8492783 DOI: 10.1007/s11103-021-01147-7] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/30/2020] [Accepted: 03/25/2021] [Indexed: 05/16/2023]
Abstract
KEY MESSAGE Here we review, from a quantitative point of view, the cell biology of protonemal tip growth in the model moss Physcomitrium patens. We focus on the role of the cytoskeleton, vesicle trafficking, and cell wall mechanics, including reviewing some of the existing mathematical models of tip growth. We provide a primer for existing cell biological tools that can be applied to the future study of tip growth in moss. Polarized cell growth is a ubiquitous process throughout the plant kingdom in which the cell elongates in a self-similar manner. This process is important for nutrient uptake by root hairs, fertilization by pollen, and gametophyte development by the protonemata of bryophytes and ferns. In this review, we will focus on the tip growth of moss cells, emphasizing the role of cytoskeletal organization, cytoplasmic zonation, vesicle trafficking, cell wall composition, and dynamics. We compare some of the existing knowledge on tip growth in protonemata against what is known in pollen tubes and root hairs, which are better-studied tip growing cells. To fully understand how plant cells grow requires that we deepen our knowledge in a variety of forms of plant cell growth. We focus this review on the model plant Physcomitrium patens, which uses tip growth as the dominant form of growth at its protonemal stage. Because mosses and vascular plants shared a common ancestor more than 450 million years ago, we anticipate that both similarities and differences between tip growing plant cells will provide mechanistic information of tip growth as well as of plant cell growth in general. Towards this mechanistic understanding, we will also review some of the existing mathematical models of plant tip growth and their applicability to investigate protonemal morphogenesis. We attempt to integrate the conclusions and data across cell biology and physical modeling to our current state of knowledge of polarized cell growth in P. patens and highlight future directions in the field.
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Affiliation(s)
- Jeffrey P Bibeau
- Department of Biology and Biotechnology, Worcester Polytechnic Institute, Worcester, MA, USA
| | - Giulia Galotto
- Department of Biology and Biotechnology, Worcester Polytechnic Institute, Worcester, MA, USA
| | - Min Wu
- Department of Mathematical Sciences, Worcester Polytechnic Institute, Worcester, MA, USA
- Bioinformatics and Computational Biology Program, Worcester Polytechnic Institute, Worcester, MA, USA
| | - Erkan Tüzel
- Bioengineering Department, Temple University, Philadelphia, PA, USA
| | - Luis Vidali
- Department of Biology and Biotechnology, Worcester Polytechnic Institute, Worcester, MA, USA.
- Bioinformatics and Computational Biology Program, Worcester Polytechnic Institute, Worcester, MA, USA.
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17
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Tian X, Wang X, Li Y. Myosin XI-B is involved in the transport of vesicles and organelles in pollen tubes of Arabidopsis thaliana. Plant J 2021; 108:1145-1161. [PMID: 34559914 DOI: 10.1111/tpj.15505] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/12/2021] [Revised: 09/09/2021] [Accepted: 09/14/2021] [Indexed: 06/13/2023]
Abstract
The movement of organelles and vesicles in pollen tubes depends on F-actin. However, the molecular mechanism through which plant myosin XI drives the movement of organelles is still controversial, and the relationship between myosin XI and vesicle movement in pollen tubes is also unclear. In this study, we found that the siliques of the myosin xi-b/e mutant were obviously shorter than those of the wild-type (WT) and that the seed set of the mutant was severely deficient. The pollen tube growth of myosin xi-b/e was significantly inhibited both in vitro and in vivo. Fluorescence recovery after photobleaching showed that the velocity of vesicle movement in the pollen tube tip of the myosin xi-b/e mutant was lower than that of the WT. It was also found that peroxisome movement was significantly inhibited in the pollen tubes of the myosin xi-b/e mutant, while the velocities of the Golgi stack and mitochondrial movement decreased relatively less in the pollen tubes of the mutant. The endoplasmic reticulum streaming in the pollen tube shanks was not significantly different between the WT and the myosin xi-b/e mutant. In addition, we found that myosin XI-B-GFP colocalized obviously with vesicles and peroxisomes in the pollen tubes of Arabidopsis. Taken together, these results indicate that myosin XI-B may bind mainly to vesicles and peroxisomes, and drive their movement in pollen tubes. These results also suggest that the mechanism by which myosin XI drives organelle movement in plant cells may be evolutionarily conserved compared with other eukaryotic cells.
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Affiliation(s)
- Xiulin Tian
- State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University, Beijing, 100193, China
| | - Xingjuan Wang
- State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University, Beijing, 100193, China
| | - Yan Li
- State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University, Beijing, 100193, China
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18
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Chin S, Kwon T, Khan BR, Sparks JA, Mallery EL, Szymanski DB, Blancaflor EB. Spatial and temporal localization of SPIRRIG and WAVE/SCAR reveal roles for these proteins in actin-mediated root hair development. Plant Cell 2021; 33:2131-2148. [PMID: 33881536 PMCID: PMC8364238 DOI: 10.1093/plcell/koab115] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Accepted: 04/15/2021] [Indexed: 05/31/2023]
Abstract
Root hairs are single-cell protrusions that enable roots to optimize nutrient and water acquisition. These structures attain their tubular shapes by confining growth to the cell apex, a process called tip growth. The actin cytoskeleton and endomembrane systems are essential for tip growth; however, little is known about how these cellular components coordinate their activities during this process. Here, we show that SPIRRIG (SPI), a beige and Chediak Higashi domain-containing protein involved in membrane trafficking, and BRK1 and SCAR2, subunits of the WAVE/SCAR (W/SC) actin nucleating promoting complex, display polarized localizations in Arabidopsis thaliana root hairs during distinct developmental stages. SPI accumulates at the root hair apex via post-Golgi compartments and positively regulates tip growth by maintaining tip-focused vesicle secretion and filamentous-actin integrity. BRK1 and SCAR2 on the other hand, mark the root hair initiation domain to specify the position of root hair emergence. Consistent with the localization data, tip growth was reduced in spi and the position of root hair emergence was disrupted in brk1 and scar1234. BRK1 depletion coincided with SPI accumulation as root hairs transitioned from initiation to tip growth. Taken together, our work uncovers a role for SPI in facilitating actin-dependent root hair development in Arabidopsis through pathways that might intersect with W/SC.
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Affiliation(s)
- Sabrina Chin
- Noble Research Institute LLC, 2510 Sam Noble Parkway, Ardmore, Oklahoma 73401, USA
| | - Taegun Kwon
- Noble Research Institute LLC, 2510 Sam Noble Parkway, Ardmore, Oklahoma 73401, USA
| | - Bibi Rafeiza Khan
- Noble Research Institute LLC, 2510 Sam Noble Parkway, Ardmore, Oklahoma 73401, USA
| | - J. Alan Sparks
- Noble Research Institute LLC, 2510 Sam Noble Parkway, Ardmore, Oklahoma 73401, USA
| | - Eileen L. Mallery
- Department of Botany and Plant Pathology, Purdue University, West Lafayette, Indiana 47907, USA
| | - Daniel B. Szymanski
- Department of Botany and Plant Pathology, Purdue University, West Lafayette, Indiana 47907, USA
- Department of Biological Sciences, Purdue University, West Lafayette, Indiana 47907, USA
| | - Elison B. Blancaflor
- Noble Research Institute LLC, 2510 Sam Noble Parkway, Ardmore, Oklahoma 73401, USA
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19
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Abstract
Kinesins constitute a superfamily of ATP-driven microtubule motor enzymes that convert the chemical energy of ATP hydrolysis into mechanical work along microtubule tracks. Kinesins are found in all eukaryotic organisms and are essential to all eukaryotic cells, involved in diverse cellular functions such as microtubule dynamics and morphogenesis, chromosome segregation, spindle formation and elongation and transport of organelles. In this review, we explore recently reported functions of kinesins in eukaryotes and compare their specific cargoes in both plant and animal kingdoms to understand the possible roles of uncharacterized motors in a kingdom based on their reported functions in other kingdoms.
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Affiliation(s)
- Iftikhar Ali
- State Key Laboratory of Molecular Developmental Biology, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences , Beijing, China
| | - Wei-Cai Yang
- State Key Laboratory of Molecular Developmental Biology, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences , Beijing, China.,The College of Advanced Agricultural Science, The University of Chinese Academy of Sciences , Beijing, China
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20
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Abstract
The plant cell wall is an extracellular matrix that envelopes cells, gives them structure and shape, constitutes the interface with symbionts, and defends plants against external biotic and abiotic stress factors. The assembly of this matrix is regulated and mediated by the cytoskeleton. Cytoskeletal elements define where new cell wall material is added and how fibrillar macromolecules are oriented in the wall. Inversely, the cytoskeleton is also key in the perception of mechanical cues generated by structural changes in the cell wall as well as the mediation of intracellular responses. We review the delivery processes of the cell wall precursors that are required for the cell wall assembly process and the structural continuity between the inside and the outside of the cell. We provide an overview of the different morphogenetic processes for which cell wall assembly is a crucial element and elaborate on relevant feedback mechanisms.
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21
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Jaeger R, Moody LA. A fundamental developmental transition in Physcomitrium patens is regulated by evolutionarily conserved mechanisms. Evol Dev 2021; 23:123-136. [PMID: 33822471 DOI: 10.1111/ede.12376] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/05/2020] [Revised: 03/09/2021] [Accepted: 03/11/2021] [Indexed: 01/15/2023]
Abstract
One of the most defining moments in history was the colonization of land by plants approximately 470 million years ago. The transition from water to land was accompanied by significant changes in the plant body plan, from those than resembled filamentous representatives of the charophytes, the sister group to land plants, to those that were morphologically complex and capable of colonizing harsher habitats. The moss Physcomitrium patens (also known as Physcomitrella patens) is an extant representative of the bryophytes, the earliest land plant lineage. The protonema of P. patens emerges from spores from a chloronemal initial cell, which can divide to self-renew to produce filaments of chloronemal cells. A chloronemal initial cell can differentiate into a caulonemal initial cell, which can divide and self-renew to produce filaments of caulonemal cells, which branch extensively and give rise to three-dimensional shoots. The process by which a chloronemal initial cell differentiates into a caulonemal initial cell is tightly regulated by auxin-induced remodeling of the actin cytoskeleton. Studies have revealed that the genetic mechanisms underpinning this transition also regulate tip growth and differentiation in diverse plant taxa. This review summarizes the known cellular and molecular mechanisms underpinning the chloronema to caulonema transition in P. patens.
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Affiliation(s)
- Richard Jaeger
- Department of Plant Sciences, University of Oxford, Oxford, UK
| | - Laura A Moody
- Department of Plant Sciences, University of Oxford, Oxford, UK
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22
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Cheng X, Bezanilla M. SABRE populates ER domains essential for cell plate maturation and cell expansion influencing cell and tissue patterning. eLife 2021; 10:65166. [PMID: 33687329 PMCID: PMC7987345 DOI: 10.7554/elife.65166] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/25/2020] [Accepted: 03/04/2021] [Indexed: 12/12/2022] Open
Abstract
SABRE, which is found throughout eukaryotes and was originally identified in plants, mediates cell expansion, division plane orientation, and planar polarity in plants. How and where SABRE mediates these processes remain open questions. We deleted SABRE in Physcomitrium patens, an excellent model for cell biology. SABRE null mutants were stunted, similar to phenotypes in seed plants. Additionally, polarized growing cells were delayed in cytokinesis, sometimes resulting in catastrophic failures. A functional SABRE fluorescent fusion protein localized to dynamic puncta on regions of the endoplasmic reticulum (ER) during interphase and at the cell plate during cell division. Without SABRE, cells accumulated ER aggregates and the ER abnormally buckled along the developing cell plate. Notably, callose deposition was delayed in ∆sabre, and in cells that failed to divide, abnormal callose accumulations formed at the cell plate. Our findings revealed a surprising and fundamental role for the ER in cell plate maturation.
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Affiliation(s)
- Xiaohang Cheng
- Department of Biological Sciences, Dartmouth College, Hanover, United States
| | - Magdalena Bezanilla
- Department of Biological Sciences, Dartmouth College, Hanover, United States
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23
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Orr RG, Furt F, Warner EL, Agar EM, Garbarino JM, Cabral SE, Dubuke ML, Butt AM, Munson M, Vidali L. Rab-E and its interaction with myosin XI are essential for polarised cell growth. New Phytol 2021; 229:1924-1936. [PMID: 33098085 PMCID: PMC8168425 DOI: 10.1111/nph.17023] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/02/2020] [Accepted: 10/12/2020] [Indexed: 05/07/2023]
Abstract
The fundamental process of polarised exocytosis requires the interconnected activity of molecular motors trafficking vesicular cargo within a dynamic cytoskeletal network. In plants, few mechanistic details are known about how molecular motors, such as myosin XI, associate with their secretory cargo to support the ubiquitous processes of polarised growth and cell division. Live-cell imaging coupled with targeted gene knockouts and a high-throughput RNAi assay enabled the first characterisation of the loss of Rab-E function. Yeast two-hybrid and subsequent in silico structural prediction uncovered a specific interaction between Rab-E and myosin XI that is conserved between P. patens and A. thaliana. Rab-E co-localises with myosin XI at sites of active exocytosis, and at the growing tip both proteins are spatiotemporally coupled. Rab-E is required for normal plant growth in P. patens and the rab-E and myosin XI phenotypes are rescued by A. thaliana's Rab-E1c and myosin XI-K/E, respectively. Both PpMyoXI and AtMyoXI-K interact with PpRabE14, and the interaction is specifically mediated by PpMyoXI residue V1422. This interaction is required for polarised growth. Our results suggest that the interaction of Rab-E and myosin XI is a conserved feature of polarised growth in plants.
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Affiliation(s)
- Robert G Orr
- Department of Biology and Biotechnology, Worcester Polytechnic Institute, Worcester, MA, 01609, USA
| | - Fabienne Furt
- Department of Biology and Biotechnology, Worcester Polytechnic Institute, Worcester, MA, 01609, USA
| | - Erin L Warner
- Department of Biology and Biotechnology, Worcester Polytechnic Institute, Worcester, MA, 01609, USA
| | - Erin M Agar
- Department of Biology and Biotechnology, Worcester Polytechnic Institute, Worcester, MA, 01609, USA
| | - Jennifer M Garbarino
- Department of Biology and Biotechnology, Worcester Polytechnic Institute, Worcester, MA, 01609, USA
| | - Sarah E Cabral
- Department of Biology and Biotechnology, Worcester Polytechnic Institute, Worcester, MA, 01609, USA
| | - Michelle L Dubuke
- Department of Biochemistry and Molecular Pharmacology, University of Massachusetts Medical School, Worcester, MA, 01605, USA
| | - Allison M Butt
- Department of Biology and Biotechnology, Worcester Polytechnic Institute, Worcester, MA, 01609, USA
| | - Mary Munson
- Department of Biochemistry and Molecular Pharmacology, University of Massachusetts Medical School, Worcester, MA, 01605, USA
| | - Luis Vidali
- Department of Biology and Biotechnology, Worcester Polytechnic Institute, Worcester, MA, 01609, USA
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24
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Abstract
The evaluation of cytoskeletal bundling is a fundamental experimental method in the field of cell biology. Although the skewness of the pixel intensity distribution derived from fluorescently-labeled cytoskeletons has been widely used as a metric to evaluate the degree of bundling in digital microscopy images, its versatility has not been fully validated. Here, we applied the coefficient of variation (CV) of intensity values as an alternative metric, and compared its performance with skewness. In synthetic images representing extremely bundled conditions, the CV successfully detected degrees of bundling that could not be distinguished by skewness. On actual microscopy images, CV was better than skewness, especially on variable-angle epifluorescence microscopic images or stimulated emission depletion and confocal microscopy images of very small areas of around 1 μm2. When blur or noise was added to synthetic images, CV was found to be robust to blur but deleteriously affected by noise, whereas skewness was robust to noise but deleteriously affected by blur. For confocal images, CV and skewness showed similar sensitivity to noise, possibly because optical blurring is often present in microscopy images. Therefore, in practical use with actual microscopy images, CV may be more appropriate than skewness, unless the image is extremely noisy.
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Affiliation(s)
- Takumi Higaki
- International Research Organization for Advanced Science and Technology, Kumamoto University, 2-39-1 Kurokami, Chuo-ku, Kumamoto, Japan.
| | - Kae Akita
- Department of Chemical Biological Science, Faculty of Science, Japan Women's University, 2-8-1 Mejirodai, Bunkyo-ku, Tokyo, Japan
| | - Kaoru Katoh
- Biomedical Research Institute, National Institute of Advanced Industrial Science and Technology (AIST), Tsukuba, Japan
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25
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Wang X, Sheng X, Tian X, Zhang Y, Li Y. Organelle movement and apical accumulation of secretory vesicles in pollen tubes of Arabidopsis thaliana depend on class XI myosins. Plant J 2020; 104:1685-1697. [PMID: 33067901 DOI: 10.1111/tpj.15030] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/08/2019] [Revised: 09/12/2020] [Accepted: 09/18/2020] [Indexed: 06/11/2023]
Abstract
F-actin and myosin XI play important roles in plant organelle movement. A few myosin XI genes in the genome of Arabidopsis are mainly expressed in mature pollen, which suggests that they may play a crucial role in pollen germination and pollen tube tip growth. In this study, a genetic complementation assay was conducted in a myosin xi-c (myo11c1) myosin xi-e (myo11c2) double mutant, and fluorescence labeling combined with microscopic observation was applied. We found that myosin XI-E (Myo11C2)-green fluorescent protein (GFP) restored the slow pollen tube growth and seed deficiency phenotypes of the myo11c1 myo11c2 double mutant and Myo11C2-GFP partially colocalized with mitochondria, peroxisomes and Golgi stacks. Furthermore, decreased mitochondrial movement and subapical accumulation were detected in myo11c1 myo11c2 double mutant pollen tubes. Fluorescence recovery after photobleaching experiments showed that the fluorescence recoveries of GFP-RabA4d and AtPRK1-GFP at the pollen tube tip of the myo11c1 myo11c2 double mutant were lower than those of the wild type were after photobleaching. These results suggest that Myo11C2 may be associated with mitochondria, peroxisomes and Golgi stacks, and play a crucial role in organelle movement and apical accumulation of secretory vesicles in pollen tubes of Arabidopsis thaliana.
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Affiliation(s)
- Xingjuan Wang
- State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University, Beijing, 100193, China
| | - Xiaojing Sheng
- State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University, Beijing, 100193, China
| | - Xiulin Tian
- State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University, Beijing, 100193, China
| | - Yu Zhang
- State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University, Beijing, 100193, China
| | - Yan Li
- State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University, Beijing, 100193, China
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26
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Duan Z, Tanaka M, Kanazawa T, Haraguchi T, Takyu A, Era A, Ueda T, Ito K, Tominaga M. Characterization of ancestral myosin XI from Marchantia polymorpha by heterologous expression in Arabidopsis thaliana. Plant J 2020; 104:460-473. [PMID: 32717107 PMCID: PMC7689712 DOI: 10.1111/tpj.14937] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/31/2019] [Accepted: 07/16/2020] [Indexed: 05/30/2023]
Abstract
Previous studies have revealed duplications and diversification of myosin XI genes between angiosperms and bryophytes; however, the functional differentiation and conservation of myosin XI between them remain unclear. Here, we identified a single myosin XI gene from the liverwort Marchantia polymorpha (Mp). The molecular properties of Mp myosin XI are similar to those of Arabidopsis myosin XIs responsible for cytoplasmic streaming, suggesting that the motor function of myosin XI is able to generate cytoplasmic streaming. In cultured Arabidopsis cells, transiently expressed green fluorescent protein (GFP)-fused Mp myosin XI was observed as some intracellular structures moving along the F-actin. These intracellular structures were co-localized with motile endoplasmic reticulum (ER) strands, suggesting that Mp myosin XI binds to the ER and generates intracellular transport in Arabidopsis cells. The tail domain of Mp myosin XI was co-localized with that of Arabidopsis myosin XI-2 and XI-K, suggesting that all these myosin XIs bind to common cargoes. Furthermore, expression of GFP-fused Mp myosin XI rescued the defects of growth, cytoplasmic streaming and actin organization in Arabidopsis multiple myosin XI knockout mutants. The heterologous expression experiments demonstrated the cellular and physiological competence of Mp myosin XI in Arabidopsis. However, the average velocity of organelle transport in Marchantia rhizoids was 0.04 ± 0.01 μm s-1 , which is approximately one-hundredth of that in Arabidopsis cells. Taken together, our results suggest that the molecular properties of myosin XI are conserved, but myosin XI-driven intracellular transport in vivo would be differentiated from bryophytes to angiosperms.
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Affiliation(s)
- Zhongrui Duan
- Faculty of Education and Integrated Arts and SciencesWaseda University2‐2 Wakamatsu‐cho, Shinjuku‐kuTokyo162‐8480Japan
| | - Misato Tanaka
- Graduate School of Science and EngineeringWaseda University2‐2 Wakamatsu‐cho, Shinjuku‐kuTokyo162‐8480Japan
| | - Takehiko Kanazawa
- Division of Cellular DynamicsNational Institute for Basic BiologyNishigonaka 38, MyodaijiOkazakiAichi444‐8585Japan
- Department of Basic BiologySOKENDAINishigonaka 38, MyodaijiOkazakiAichi444‐8585Japan
| | - Takeshi Haraguchi
- Department of BiologyGraduate School of ScienceChiba UniversityInage‐kuChiba263‐8522Japan
| | - Akiko Takyu
- Department of BiologyGraduate School of ScienceChiba UniversityInage‐kuChiba263‐8522Japan
| | - Atsuko Era
- Department of Biological SciencesGraduate School of ScienceThe University of TokyoBunkyo‐kuTokyo113‐0033Japan
| | - Takashi Ueda
- Division of Cellular DynamicsNational Institute for Basic BiologyNishigonaka 38, MyodaijiOkazakiAichi444‐8585Japan
- Department of Basic BiologySOKENDAINishigonaka 38, MyodaijiOkazakiAichi444‐8585Japan
| | - Kohji Ito
- Department of BiologyGraduate School of ScienceChiba UniversityInage‐kuChiba263‐8522Japan
| | - Motoki Tominaga
- Faculty of Education and Integrated Arts and SciencesWaseda University2‐2 Wakamatsu‐cho, Shinjuku‐kuTokyo162‐8480Japan
- Graduate School of Science and EngineeringWaseda University2‐2 Wakamatsu‐cho, Shinjuku‐kuTokyo162‐8480Japan
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27
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Orr RG, Foley SJ, Sherman C, Abreu I, Galotto G, Liu B, González-Guerrero M, Vidali L. Robust Survival-Based RNA Interference of Gene Families Using in Tandem Silencing of Adenine Phosphoribosyltransferase. Plant Physiol 2020; 184:607-619. [PMID: 32764132 PMCID: PMC7536682 DOI: 10.1104/pp.20.00865] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/30/2020] [Accepted: 07/15/2020] [Indexed: 05/07/2023]
Abstract
RNA interference (RNAi) enables flexible and dynamic interrogation of entire gene families or essential genes without the need for exogenous proteins, unlike CRISPR-Cas technology. Unfortunately, isolation of plants undergoing potent gene silencing requires laborious design, visual screening, and physical separation for downstream characterization. Here, we developed an adenine phosphoribosyltransferase (APT)-based RNAi technology (APTi) in Physcomitrella patens that improves upon the multiple limitations of current RNAi techniques. APTi exploits the prosurvival output of transiently silencing APT in the presence of 2-fluoroadenine, thereby establishing survival itself as a reporter of RNAi. To maximize the silencing efficacy of gene targets, we created vectors that facilitate insertion of any gene target sequence in tandem with the APT silencing motif. We tested the efficacy of APTi with two gene families, the actin-dependent motor, myosin XI (a,b), and the putative chitin receptor Lyk5 (a,b,c). The APTi approach resulted in a homogenous population of transient P. patens mutants specific for our gene targets with zero surviving background plants within 8 d. The observed mutants directly corresponded to a maximal 93% reduction of myosin XI protein and complete loss of chitin-induced calcium spiking in the Lyk5-RNAi background. The positive selection nature of APTi represents a fundamental improvement in RNAi technology and will contribute to the growing demand for technologies amenable to high-throughput phenotyping.
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Affiliation(s)
- Robert G Orr
- Department of Biology and Biotechnology, Worcester Polytechnic Institute, Worcester, Massachusetts 01609
| | - Stephen J Foley
- Department of Chemistry and Biochemistry, Worcester Polytechnic Institute, Worcester, Massachusetts 01609
| | - Catherine Sherman
- Department of Biology and Biotechnology, Worcester Polytechnic Institute, Worcester, Massachusetts 01609
- Bioinformatics and Computational Biology Program, Worcester Polytechnic Institute, Worcester, Massachusetts 01605
| | - Isidro Abreu
- Centro de Biotecnología y Genómica de Plantas (UPM-INIA), Universidad Politécnica de Madrid, Madrid 28223, Spain
| | - Giulia Galotto
- Department of Biology and Biotechnology, Worcester Polytechnic Institute, Worcester, Massachusetts 01609
| | - Boyuan Liu
- Department of Biology and Biotechnology, Worcester Polytechnic Institute, Worcester, Massachusetts 01609
| | - Manuel González-Guerrero
- Centro de Biotecnología y Genómica de Plantas (UPM-INIA), Universidad Politécnica de Madrid, Madrid 28223, Spain
| | - Luis Vidali
- Department of Biology and Biotechnology, Worcester Polytechnic Institute, Worcester, Massachusetts 01609
- Department of Chemistry and Biochemistry, Worcester Polytechnic Institute, Worcester, Massachusetts 01609
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28
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Gavrin A, Rey T, Torode TA, Toulotte J, Chatterjee A, Kaplan JL, Evangelisti E, Takagi H, Charoensawan V, Rengel D, Journet EP, Debellé F, de Carvalho-Niebel F, Terauchi R, Braybrook S, Schornack S. Developmental Modulation of Root Cell Wall Architecture Confers Resistance to an Oomycete Pathogen. Curr Biol 2020; 30:4165-4176.e5. [PMID: 32888486 PMCID: PMC7658807 DOI: 10.1016/j.cub.2020.08.011] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/28/2020] [Revised: 07/08/2020] [Accepted: 08/04/2020] [Indexed: 11/26/2022]
Abstract
The cell wall is the primary interface between plant cells and their immediate environment and must balance multiple functionalities, including the regulation of growth, the entry of beneficial microbes, and protection against pathogens. Here, we demonstrate how API, a SCAR2 protein component of the SCAR/WAVE complex, controls the root cell wall architecture important for pathogenic oomycete and symbiotic bacterial interactions in legumes. A mutation in API results in root resistance to the pathogen Phytophthora palmivora and colonization defects by symbiotic rhizobia. Although api mutant plants do not exhibit significant overall growth and development defects, their root cells display delayed actin and endomembrane trafficking dynamics and selectively secrete less of the cell wall polysaccharide xyloglucan. Changes associated with a loss of API establish a cell wall architecture with altered biochemical properties that hinder P. palmivora infection progress. Thus, developmental stage-dependent modifications of the cell wall, driven by SCAR/WAVE, are important in balancing cell wall developmental functions and microbial invasion. The SCAR protein API controls actin and endomembrane trafficking dynamics SCAR proteins of several plant species can support symbiosis and pathogen infection A mutation in API affects specific biochemical properties of plant cell walls An altered wall architecture results in root resistance to Phytophthora palmivora
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Affiliation(s)
- Aleksandr Gavrin
- Sainsbury Laboratory (SLCU), University of Cambridge, 47 Bateman Street, Cambridge CB2 1LR, UK
| | - Thomas Rey
- Sainsbury Laboratory (SLCU), University of Cambridge, 47 Bateman Street, Cambridge CB2 1LR, UK
| | - Thomas A Torode
- Sainsbury Laboratory (SLCU), University of Cambridge, 47 Bateman Street, Cambridge CB2 1LR, UK
| | - Justine Toulotte
- Sainsbury Laboratory (SLCU), University of Cambridge, 47 Bateman Street, Cambridge CB2 1LR, UK
| | - Abhishek Chatterjee
- Sainsbury Laboratory (SLCU), University of Cambridge, 47 Bateman Street, Cambridge CB2 1LR, UK
| | - Jonathan Louis Kaplan
- Sainsbury Laboratory (SLCU), University of Cambridge, 47 Bateman Street, Cambridge CB2 1LR, UK
| | - Edouard Evangelisti
- Sainsbury Laboratory (SLCU), University of Cambridge, 47 Bateman Street, Cambridge CB2 1LR, UK
| | - Hiroki Takagi
- Iwate Biotechnology Institute, 22-174-4 Narita, Kitakami, Iwate 024-0003, Japan
| | - Varodom Charoensawan
- Sainsbury Laboratory (SLCU), University of Cambridge, 47 Bateman Street, Cambridge CB2 1LR, UK; Department of Biochemistry, Faculty of Science, and Integrative Computational BioScience (ICBS) Center, Mahidol University, Bangkok 10400, Thailand
| | - David Rengel
- LIPM, Université de Toulouse, INRA, CNRS, Castanet-Tolosan 31326, France; GeT-PlaGe, Genotoul, INRA US1426, Castanet-Tolosan Cedex, France
| | - Etienne-Pascal Journet
- LIPM, Université de Toulouse, INRA, CNRS, Castanet-Tolosan 31326, France; AGIR, Université de Toulouse, INRA, ENSFEA, Castanet-Tolosan 31326, France
| | - Frédéric Debellé
- LIPM, Université de Toulouse, INRA, CNRS, Castanet-Tolosan 31326, France
| | | | - Ryohei Terauchi
- Iwate Biotechnology Institute, 22-174-4 Narita, Kitakami, Iwate 024-0003, Japan
| | - Siobhan Braybrook
- Sainsbury Laboratory (SLCU), University of Cambridge, 47 Bateman Street, Cambridge CB2 1LR, UK; Department of Molecular, Cell, and Developmental Biology, 610 Charles E Young Drive South, University of California, Los Angeles, Los Angeles, CA 90095, USA; Molecular Biology Institute, University of California, Los Angeles, Los Angeles, CA 90095, USA; Eli and Edythe Broad Center of Regenerative Medicine and Stem Cell Research, University of California, Los Angeles, Los Angeles, CA 90095, USA
| | - Sebastian Schornack
- Sainsbury Laboratory (SLCU), University of Cambridge, 47 Bateman Street, Cambridge CB2 1LR, UK.
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29
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Rensing SA, Goffinet B, Meyberg R, Wu SZ, Bezanilla M. The Moss Physcomitrium ( Physcomitrella) patens: A Model Organism for Non-Seed Plants. Plant Cell 2020; 32:1361-1376. [PMID: 32152187 PMCID: PMC7203925 DOI: 10.1105/tpc.19.00828] [Citation(s) in RCA: 131] [Impact Index Per Article: 32.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/24/2019] [Revised: 02/17/2020] [Accepted: 03/05/2020] [Indexed: 05/06/2023]
Abstract
Since the discovery two decades ago that transgenes are efficiently integrated into the genome of Physcomitrella patens by homologous recombination, this moss has been a premier model system to study evolutionary developmental biology questions, stem cell reprogramming, and the biology of nonvascular plants. P patens was the first non-seed plant to have its genome sequenced. With this level of genomic information, together with increasing molecular genetic tools, a large number of reverse genetic studies have propelled the use of this model system. A number of technological advances have recently opened the door to forward genetics as well as extremely efficient and precise genome editing in P patens Additionally, careful phylogenetic studies with increased resolution have suggested that P patens emerged from within Physcomitrium Thus, rather than Physcomitrella patens, the species should be named Physcomitrium patens Here we review these advances and describe the areas where P patens has had the most impact on plant biology.
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Affiliation(s)
- Stefan A Rensing
- Faculty of Biology, Plant Cell Biology, Philipps University of Marburg, 35037 Marburg an der Lahn, Hesse, Germany
| | - Bernard Goffinet
- Department of Ecology and Evolutionary Biology, University of Connecticut, Storrs, Connecticut 06269
| | - Rabea Meyberg
- Faculty of Biology, Plant Cell Biology, Philipps University of Marburg, 35037 Marburg an der Lahn, Hesse, Germany
| | - Shu-Zon Wu
- Department of Biological Sciences, Dartmouth College, Hanover, New Hampshire 03755
| | - Magdalena Bezanilla
- Department of Biological Sciences, Dartmouth College, Hanover, New Hampshire 03755
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30
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Abstract
The actin cytoskeleton is required for cell expansion and implicated in cellular responses to the phytohormone auxin. However, the mechanisms that coordinate auxin signaling, cytoskeletal remodeling and cell expansion are poorly understood. Previous studies examined long-term actin cytoskeleton responses to auxin, but plants respond to auxin within minutes. Before this work, an extracellular auxin receptor - rather than the auxin transporter AUXIN RESISTANT 1 (AUX1) - was considered to precede auxin-induced cytoskeleton reorganization. In order to correlate actin array organization and dynamics with degree of cell expansion, quantitative imaging tools established baseline actin organization and illuminated individual filament behaviors in root epidermal cells under control conditions and after indole-3-acetic acid (IAA) application. We evaluated aux1 mutant actin organization responses to IAA and the membrane-permeable auxin 1-naphthylacetic acid (NAA). Cell length predicted actin organization and dynamics in control roots; short-term IAA treatments stimulated denser and more parallel, longitudinal arrays by inducing filament unbundling within minutes. Although AUX1 is necessary for full actin rearrangements in response to auxin, cytoplasmic auxin (i.e. NAA) stimulated a lesser response. Actin filaments became more 'organized' after IAA stopped elongation, refuting the hypothesis that 'more organized' actin arrays universally correlate with rapid growth. Short-term actin cytoskeleton response to auxin requires AUX1 and/or cytoplasmic auxin.
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Affiliation(s)
- Ruthie S. Arieti
- Department of Biological SciencesPurdue UniversityWest LafayetteIN47907‐2064USA
- Purdue University Interdisciplinary Life Sciences Graduate Program (PULSe)Purdue UniversityWest LafayetteIN47907USA
- Center for Plant BiologyPurdue UniversityWest LafayetteIN47907USA
| | - Christopher J. Staiger
- Department of Biological SciencesPurdue UniversityWest LafayetteIN47907‐2064USA
- Center for Plant BiologyPurdue UniversityWest LafayetteIN47907USA
- Department of Botany and Plant PathologyPurdue UniversityWest LafayetteIN47907USA
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31
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Abstract
This protocol describes the automated imaging and a quantitative analysis of the morphology of small plants from the moss Physcomitrella patens. This method can be used for the analysis of growth phenotypes produced by transient RNA interference or for the analysis of stable mutant plants. Furthermore, we describe how to acquire higher resolution images via the acquisition of a collection of multiple overlapping tiles from the same image. Information is presented to guide the investigator in the choice of vectors and basic conditions to perform transient RNA interference in moss. Detailed directions and examples for fluorescence image acquisition of small regenerating moss plants are provided. Instructions for stitching image tiles and for using an ImageJ-based macro for the quantitative morphological analysis of moss plants are also provided.
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Affiliation(s)
- Giulia Galotto
- Department of Biology and Biotechnology, Worcester Polytechnic Institute, Worcester, MA, USA
| | - Jeffrey P Bibeau
- Department of Biology and Biotechnology, Worcester Polytechnic Institute, Worcester, MA, USA
| | - Luis Vidali
- Department of Biology and Biotechnology, Worcester Polytechnic Institute, Worcester, MA, USA.
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32
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Bibeau JP, Furt F, Mousavi SI, Kingsley JL, Levine MF, Tüzel E, Vidali L. In vivo interactions between myosin XI, vesicles and filamentous actin are fast and transient in Physcomitrella patens. J Cell Sci 2020; 133:jcs.234682. [PMID: 31964706 DOI: 10.1242/jcs.234682] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2019] [Accepted: 01/07/2020] [Indexed: 12/25/2022] Open
Abstract
The actin cytoskeleton and active membrane trafficking machinery are essential for polarized cell growth. To understand the interactions between myosin XI, vesicles and actin filaments in vivo, we performed fluorescence recovery after photobleaching and showed that the dynamics of myosin XIa at the tip of the spreading earthmoss Physcomitrella patens caulonemal cells are actin-dependent and that 50% of myosin XI is bound to vesicles. To obtain single-particle information, we used variable-angle epifluorescence microscopy in protoplasts to demonstrate that protein myosin XIa and VAMP72-labeled vesicles localize in time and space over periods lasting only a few seconds. By tracking data with Hidden Markov modeling, we showed that myosin XIa and VAMP72-labeled vesicles exhibit short runs of actin-dependent directed transport. We also found that the interaction of myosin XI with vesicles is short-lived. Together, this vesicle-bound fraction, fast off-rate and short average distance traveled seem be crucial for the dynamic oscillations observed at the tip, and might be vital for regulation and recycling of the exocytosis machinery, while simultaneously promoting vesicle focusing and vesicle secretion at the tip, necessary for cell wall expansion.
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Affiliation(s)
- Jeffrey P Bibeau
- Department of Biology and Biotechnology, Worcester Polytechnic Institute, Worcester, MA 01609, USA
| | - Fabienne Furt
- Department of Biology and Biotechnology, Worcester Polytechnic Institute, Worcester, MA 01609, USA
| | - S Iman Mousavi
- Department of Physics, Worcester Polytechnic Institute, Worcester, MA 01609, USA
| | - James L Kingsley
- Department of Physics, Worcester Polytechnic Institute, Worcester, MA 01609, USA
| | - Max F Levine
- Bioinformatics and Computational Biology Program, Worcester Polytechnic Institute, Worcester, MA 01609, USA
| | - Erkan Tüzel
- Department of Physics, Worcester Polytechnic Institute, Worcester, MA 01609, USA.,Bioinformatics and Computational Biology Program, Worcester Polytechnic Institute, Worcester, MA 01609, USA.,Bioengineering Department, College of Engineering, Temple University, Philadelphia, PA 19122, USA
| | - Luis Vidali
- Department of Biology and Biotechnology, Worcester Polytechnic Institute, Worcester, MA 01609, USA .,Bioinformatics and Computational Biology Program, Worcester Polytechnic Institute, Worcester, MA 01609, USA
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33
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van Gisbergen P, Wu SZ, Cheng X, Pattavina KA, Bezanilla M. In vivo analysis of formin dynamics in the moss P. patens reveals functional class diversification. J Cell Sci 2020; 133:jcs233791. [PMID: 31969472 PMCID: PMC10679510 DOI: 10.1242/jcs.233791] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2019] [Accepted: 01/07/2020] [Indexed: 01/02/2023] Open
Abstract
Formins are actin regulators critical for diverse processes across eukaryotes. With many formins in plants and animals, it has been challenging to determine formin function in vivo We found that the phylogenetically distinct class I integral membrane formins (denoted For1) from the moss P.patens enrich at sites of membrane turnover, with For1D more tightly associated with the plasma membrane than For1A. To probe formin function, we generated formin-null lines with greatly reduced formin complexity. We found that For1A and For1D help to anchor actin near the cell apex, with For1A contributing to formation of cytosolic actin, while For1D contributes to plasma membrane-associated actin. At the cortex, For1A and For1D localized to motile puncta and differentially impacted actin dynamics. We found that class I cortical formin mobility depended on microtubules and only moderately on actin, whereas class II formin (denoted For2) mobility solely depended on actin. Moreover, cortical For2A tightly correlated with the puncta labeled by the endocytic membrane dye FM4-64, and null mutants in class I formins did not affect uptake of a similar dye, FM1-43, suggesting that class I and II formins are involved in distinct membrane trafficking pathways.
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Affiliation(s)
- Peter van Gisbergen
- Plant Biology Graduate Program, University of Massachusetts, Amherst, MA 01003, USA
| | - Shu-Zon Wu
- Department of Biological Sciences, Dartmouth College, Hanover, NH 03755, USA
| | - Xiaohang Cheng
- Department of Biological Sciences, Dartmouth College, Hanover, NH 03755, USA
| | - Kelli A Pattavina
- Molecular and Cellular Biology Graduate Program, University of Massachusetts, Amherst, MA 01003, USA
| | - Magdalena Bezanilla
- Department of Biological Sciences, Dartmouth College, Hanover, NH 03755, USA
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34
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de Bang L, Paez-Garcia A, Cannon AE, Chin S, Kolape J, Liao F, Sparks JA, Jiang Q, Blancaflor EB. Brassinosteroids Inhibit Autotropic Root Straightening by Modifying Filamentous-Actin Organization and Dynamics. Front Plant Sci 2020; 11:5. [PMID: 32117357 PMCID: PMC7010715 DOI: 10.3389/fpls.2020.00005] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/18/2019] [Accepted: 01/06/2020] [Indexed: 05/12/2023]
Abstract
When positioned horizontally, roots grow down toward the direction of gravity. This phenomenon, called gravitropism, is influenced by most of the major plant hormones including brassinosteroids. Epi-brassinolide (eBL) was previously shown to enhance root gravitropism, a phenomenon similar to the response of roots exposed to the actin inhibitor, latrunculin B (LatB). This led us to hypothesize that eBL might enhance root gravitropism through its effects on filamentous-actin (F-actin). This hypothesis was tested by comparing gravitropic responses of maize (Zea mays) roots treated with eBL or LatB. LatB- and eBL-treated roots displayed similar enhanced downward growth compared with controls when vertical roots were oriented horizontally. Moreover, the effects of the two compounds on root growth directionality were more striking on a slowly-rotating two-dimensional clinostat. Both compounds inhibited autotropism, a process in which the root straightened after the initial gravistimulus was withdrawn by clinorotation. Although eBL reduced F-actin density in chemically-fixed Z. mays roots, the impact was not as strong as that of LatB. Modification of F-actin organization after treatment with both compounds was also observed in living roots of barrel medic (Medicago truncatula) seedlings expressing genetically encoded F-actin reporters. Like in fixed Z. mays roots, eBL effects on F-actin in living M. truncatula roots were modest compared with those of LatB. Furthermore, live cell imaging revealed a decrease in global F-actin dynamics in hypocotyls of etiolated M. truncatula seedlings treated with eBL compared to controls. Collectively, our data indicate that eBL-and LatB-induced enhancement of root gravitropism can be explained by inhibited autotropic root straightening, and that eBL affects this process, in part, by modifying F-actin organization and dynamics.
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Affiliation(s)
- Louise de Bang
- Noble Research Institute LLC, Ardmore, OK, United States
- Department of Plant and Environmental Sciences, University of Copenhagen, Copenhagen, Denmark
| | | | - Ashley E. Cannon
- Noble Research Institute LLC, Ardmore, OK, United States
- Department of Biological Sciences, University of North Texas, Denton, TX, United States
| | - Sabrina Chin
- Noble Research Institute LLC, Ardmore, OK, United States
| | - Jaydeep Kolape
- Noble Research Institute LLC, Ardmore, OK, United States
- Center for Biotechnology, University of Nebraska—Lincoln, Lincoln, NE, United States
| | - Fuqi Liao
- Noble Research Institute LLC, Ardmore, OK, United States
| | - J. Alan Sparks
- Noble Research Institute LLC, Ardmore, OK, United States
| | - Qingzhen Jiang
- Noble Research Institute LLC, Ardmore, OK, United States
| | - Elison B. Blancaflor
- Noble Research Institute LLC, Ardmore, OK, United States
- *Correspondence: Elison B. Blancaflor,
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35
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Li X, Speicher TL, Dees D, Mansoori N, McManus JB, Tien M, Trindade LM, Wallace IS, Roberts AW. Convergent evolution of hetero-oligomeric cellulose synthesis complexes in mosses and seed plants. Plant J 2019; 99:862-876. [PMID: 31021018 PMCID: PMC6711812 DOI: 10.1111/tpj.14366] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/07/2018] [Revised: 03/22/2019] [Accepted: 04/15/2019] [Indexed: 05/31/2023]
Abstract
In seed plants, cellulose is synthesized by rosette-shaped cellulose synthesis complexes (CSCs) that are obligate hetero-oligomeric, comprising three non-interchangeable cellulose synthase (CESA) isoforms. The moss Physcomitrella patens has rosette CSCs and seven CESAs, but its common ancestor with seed plants had rosette CSCs and a single CESA gene. Therefore, if P. patens CSCs are hetero-oligomeric, then CSCs of this type evolved convergently in mosses and seed plants. Previous gene knockout and promoter swap experiments showed that PpCESAs from class A (PpCESA3 and PpCESA8) and class B (PpCESA6 and PpCESA7) have non-redundant functions in secondary cell wall cellulose deposition in leaf midribs, whereas the two members of each class are redundant. Based on these observations, we proposed the hypothesis that the secondary class A and class B PpCESAs associate to form hetero-oligomeric CSCs. Here we show that transcription of secondary class A PpCESAs is reduced when secondary class B PpCESAs are knocked out and vice versa, as expected for genes encoding isoforms that occupy distinct positions within the same CSC. The class A and class B isoforms co-accumulate in developing gametophores and co-immunoprecipitate, suggesting that they interact to form a complex in planta. Finally, secondary PpCESAs interact with each other, whereas three of four fail to self-interact when expressed in two different heterologous systems. These results are consistent with the hypothesis that obligate hetero-oligomeric CSCs evolved independently in mosses and seed plants and we propose the constructive neutral evolution hypothesis as a plausible explanation for convergent evolution of hetero-oligomeric CSCs.
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Affiliation(s)
- Xingxing Li
- Department of Biological Sciences, University of Rhode Island, Kingston, Rhode Island 02881, USA
| | - Tori L. Speicher
- Department of Biochemistry and Molecular Biology, University of Nevada, Reno, Nevada 89557, USA
| | - Dianka Dees
- Wageningen UR Plant Breeding, Wageningen University and Research, Droevendaalsesteeg 1, 6708 PB Wageningen, the Netherlands
| | - Nasim Mansoori
- Wageningen UR Plant Breeding, Wageningen University and Research, Droevendaalsesteeg 1, 6708 PB Wageningen, the Netherlands
| | - John B. McManus
- Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, Pennsylvania 16802, USA
| | - Ming Tien
- Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, Pennsylvania 16802, USA
| | - Luisa M. Trindade
- Wageningen UR Plant Breeding, Wageningen University and Research, Droevendaalsesteeg 1, 6708 PB Wageningen, the Netherlands
| | - Ian S. Wallace
- Department of Biochemistry and Molecular Biology, University of Nevada, Reno, Nevada 89557, USA
| | - Alison W. Roberts
- Department of Biological Sciences, University of Rhode Island, Kingston, Rhode Island 02881, USA
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36
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Laggoun F, Dardelle F, Dehors J, Falconet D, Driouich A, Rochais C, Dallemagne P, Lehner A, Mollet JC. A chemical screen identifies two novel small compounds that alter Arabidopsis thaliana pollen tube growth. BMC Plant Biol 2019; 19:152. [PMID: 31010418 PMCID: PMC6475968 DOI: 10.1186/s12870-019-1743-9] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/05/2018] [Accepted: 03/27/2019] [Indexed: 05/23/2023]
Abstract
BACKGROUND During sexual reproduction, pollen grains land on the stigma, rehydrate and produce pollen tubes that grow through the female transmitting-tract tissue allowing the delivery of the two sperm cells to the ovule and the production of healthy seeds. Because pollen tubes are single cells that expand by tip-polarized growth, they represent a good model to study the growth dynamics, cell wall deposition and intracellular machineries. Aiming to understand this complex machinery, we used a low throughput chemical screen approach in order to isolate new tip-growth disruptors. The effect of a chemical inhibitor of monogalactosyldiacylglycerol synthases, galvestine-1, was also investigated. The present work further characterizes their effects on the tip-growth and intracellular dynamics of pollen tubes. RESULTS Two small compounds among 258 were isolated based on their abilities to perturb pollen tube growth. They were found to disrupt in vitro pollen tube growth of tobacco, tomato and Arabidopsis thaliana. We show that these 3 compounds induced abnormal phenotypes (bulging and/or enlarged pollen tubes) and reduced pollen tube length in a dose dependent manner. Pollen germination was significantly reduced after treatment with the two compounds isolated from the screen. They also affected cell wall material deposition in pollen tubes. The compounds decreased anion superoxide accumulation, disorganized actin filaments and RIC4 dynamics suggesting that they may affect vesicular trafficking at the pollen tube tip. CONCLUSION These molecules may alter directly or indirectly ROP1 activity, a key regulator of pollen tube growth and vesicular trafficking and therefore represent good tools to further study cellular dynamics during polarized-cell growth.
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Affiliation(s)
- Ferdousse Laggoun
- Normandie Université, UNIROUEN, Laboratoire Glycobiologie et Matrice Extracellulaire Végétale EA4358, Fédération de Recherche “NORVEGE”- FED 4277, 76000 Rouen, France
| | - Flavien Dardelle
- Normandie Université, UNIROUEN, Laboratoire Glycobiologie et Matrice Extracellulaire Végétale EA4358, Fédération de Recherche “NORVEGE”- FED 4277, 76000 Rouen, France
- Present Address: LPS-BioSciences, Bâtiment 409, Université Paris-Sud, 91400 Orsay, France
| | - Jérémy Dehors
- Normandie Université, UNIROUEN, Laboratoire Glycobiologie et Matrice Extracellulaire Végétale EA4358, Fédération de Recherche “NORVEGE”- FED 4277, 76000 Rouen, France
| | - Denis Falconet
- Laboratoire de Physiologie Cellulaire et Végétale, CNRS, CEA, INRA, Université Grenoble Alpes, Institut de Biosciences et Biotechnologies de Grenoble, CEA Grenoble, 38000 Grenoble, cedex 9 France
| | - Azeddine Driouich
- Normandie Université, UNIROUEN, Laboratoire Glycobiologie et Matrice Extracellulaire Végétale EA4358, Fédération de Recherche “NORVEGE”- FED 4277, 76000 Rouen, France
| | - Christophe Rochais
- Normandie Université, UNICAEN, Centre d’Etudes et de Recherche sur le Médicament de Normandie, CNRS 3038 INC3M, SFR ICORE, 14032, Caen, France
| | - Patrick Dallemagne
- Normandie Université, UNICAEN, Centre d’Etudes et de Recherche sur le Médicament de Normandie, CNRS 3038 INC3M, SFR ICORE, 14032, Caen, France
| | - Arnaud Lehner
- Normandie Université, UNIROUEN, Laboratoire Glycobiologie et Matrice Extracellulaire Végétale EA4358, Fédération de Recherche “NORVEGE”- FED 4277, 76000 Rouen, France
| | - Jean-Claude Mollet
- Normandie Université, UNIROUEN, Laboratoire Glycobiologie et Matrice Extracellulaire Végétale EA4358, Fédération de Recherche “NORVEGE”- FED 4277, 76000 Rouen, France
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Le Bail A, Schulmeister S, Perroud PF, Ntefidou M, Rensing SA, Kost B. Analysis of the Localization of Fluorescent PpROP1 and PpROP-GEF4 Fusion Proteins in Moss Protonemata Based on Genomic "Knock-In" and Estradiol-Titratable Expression. Front Plant Sci 2019; 10:456. [PMID: 31031790 PMCID: PMC6473103 DOI: 10.3389/fpls.2019.00456] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/30/2018] [Accepted: 03/26/2019] [Indexed: 05/26/2023]
Abstract
Tip growth of pollen tubes, root hairs, and apical cells of moss protonemata is controlled by ROP (Rho of plants) GTPases, which were shown to accumulate at the apical plasma membrane of these cells. However, most ROP localization patterns reported in the literature are based on fluorescent protein tagging and need to be interpreted with caution, as ROP fusion proteins were generally overexpressed at undefined levels, in many cases without assessing effects on tip growth. ROP-GEFs, important regulators of ROP activity, were also described to accumulate at the apical plasma membrane during tip growth. However, to date only the localization of fluorescent ROP-GEF fusion proteins strongly overexpressed using highly active promoters have been investigated. Here, the intracellular distributions of fluorescent PpROP1 and PpROP-GEF4 fusion proteins expressed at essentially endogenous levels in apical cells of Physcomitrella patens "knock-in" protonemata were analyzed. Whereas PpROP-GEF4 was found to associate with a small apical plasma membrane domain, PpROP1 expression was below the detection limit. Estradiol-titratable expression of a fluorescent PpROP1 fusion protein at the lowest detectable level, at which plant development was only marginally affected, was therefore employed to show that PpROP1 also accumulates at the apical plasma membrane, although within a substantially larger domain. Interestingly, RNA-Seq data indicated that the majority of all genes active in protonemata are expressed at lower levels than PpROP1, suggesting that estradiol-titratable expression may represent an important alternative to "knock-in" based analysis of the intracellular distribution of fluorescent fusion proteins in protonemal cells.
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Affiliation(s)
- Aude Le Bail
- Cell Biology, Department of Biology, Friedrich–Alexander University Erlangen–Nürnberg, Erlangen, Germany
| | - Sylwia Schulmeister
- Cell Biology, Department of Biology, Friedrich–Alexander University Erlangen–Nürnberg, Erlangen, Germany
| | | | - Maria Ntefidou
- Cell Biology, Department of Biology, Friedrich–Alexander University Erlangen–Nürnberg, Erlangen, Germany
| | - Stefan A. Rensing
- Plant Cell Biology, Faculty of Biology, Philipps University of Marburg, Marburg, Germany
| | - Benedikt Kost
- Cell Biology, Department of Biology, Friedrich–Alexander University Erlangen–Nürnberg, Erlangen, Germany
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Kumar MN, Bau YC, Longkumer T, Verslues PE. Low Water Potential and At14a-Like1 (AFL1) Effects on Endocytosis and Actin Filament Organization. Plant Physiol 2019; 179:1594-1607. [PMID: 30728274 PMCID: PMC6446769 DOI: 10.1104/pp.18.01314] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/18/2018] [Accepted: 01/31/2019] [Indexed: 05/20/2023]
Abstract
At14a-Like1 (AFL1) is a stress-induced protein of unknown function that promotes growth during low water potential stress and drought. Previous analysis indicated that AFL1 may have functions related to endocytosis and regulation of actin filament organization, processes for which the effects of low water potential are little known. We found that low water potential led to a decrease in endocytosis, as measured by uptake of the membrane-impermeable dye FM4-64. Ectopic expression of AFL1 reversed the decrease in FM4-64 uptake seen in wild type, while reduced AFL1 expression led to further inhibition of FM4-64 uptake. Increased AFL1 also made FM4-64 uptake less sensitive to the actin filament disruptor Latrunculin B (LatB). LatB decreased AFL1-Clathrin Light Chain colocalization, further indicating that effects of AFL1 on endocytosis may be related to actin filament organization or stability. Consistent with this hypothesis, ectopic AFL1 expression made actin filaments less sensitive to disruption by LatB or Cytochalasin D and led to increased actin filament skewness and decreased occupancy, indicative of more bundled actin filaments. This latter effect could be partially mimicked by the actin filament stabilizer Jasplakinolide (JASP). However, AFL1 did not substantially inhibit actin filament dynamics, indicating that AFL1 acts via a different mechanism than JASP-induced stabilization. AFL1 partially colocalized with actin filaments but not with microtubules, further indicating actin-filament-related function of AFL1. These data provide insight into endocytosis and actin filament responses to low water potential stress and demonstrate an involvement of AFL1 in these key cellular processes.
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Affiliation(s)
- M Nagaraj Kumar
- Institute of Plant and Microbial Biology, Academia Sinica, Taipei 115, Taiwan
| | - Yu-Chiuan Bau
- Institute of Plant and Microbial Biology, Academia Sinica, Taipei 115, Taiwan
| | | | - Paul E Verslues
- Institute of Plant and Microbial Biology, Academia Sinica, Taipei 115, Taiwan
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39
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Bascom C, Burkart GM, Mallett DR, O’Sullivan JE, Tomaszewski AJ, Walsh K, Bezanilla M. Systematic survey of the function of ROP regulators and effectors during tip growth in the moss Physcomitrella patens. J Exp Bot 2019; 70:447-457. [PMID: 30380098 PMCID: PMC6322563 DOI: 10.1093/jxb/ery376] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/04/2018] [Accepted: 10/18/2018] [Indexed: 05/03/2023]
Abstract
Rho/Rac of plants (ROP) GTPases are plant-specific small GTPases that regulate cell morphology. ROP activity is controlled by several families of regulatory proteins. However, how these diverse regulators contribute to polarized growth remains understudied. In a system-wide approach, we used RNAi to silence each gene family of known ROP regulators in the juvenile tissues of the moss Physcomitrella patens. We found that the GTPase activating proteins, but not the ROP enhancers, are essential for tip growth. The guanine exchange factors (GEFs), which are comprised of ROPGEFs and Spikes, both contribute to growth. However, silencing Spikes results in less-polarized plants as compared to silencing ROPGEFs, suggesting that Spikes contribute more to establishing cell polarity. Silencing the single-gene family of guanine dissociation inhibitors also inhibits growth, resulting in small, unpolarized plants. In contrast, silencing the ROP effector ROP-interactive CRIB-containing (RIC) protein, which is encoded by a single gene, results in plants larger than the controls, suggesting that RIC functions to inhibit tip growth in moss. Taken together, this systematic loss-of-function survey provides insights into the function of ROP regulators during polarized growth.
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Affiliation(s)
- Carlisle Bascom
- Plant Biology Graduate Program, University of Massachusetts, Amherst, USA
- Department of Biological Sciences, Dartmouth College, Hanover NH, USA
| | - Graham M Burkart
- Plant Biology Graduate Program, University of Massachusetts, Amherst, USA
| | - Darren R Mallett
- Department of Biological Sciences, Dartmouth College, Hanover NH, USA
- Biology Department, University of Massachusetts, Amherst, USA
| | | | | | - Katherine Walsh
- Biology Department, University of Massachusetts, Amherst, USA
| | - Magdalena Bezanilla
- Department of Biological Sciences, Dartmouth College, Hanover NH, USA
- Correspondence:
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40
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Wu SZ, Yamada M, Mallett DR, Bezanilla M. Cytoskeletal discoveries in the plant lineage using the moss Physcomitrella patens. Biophys Rev 2018; 10:1683-1693. [PMID: 30382556 DOI: 10.1007/s12551-018-0470-z] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2018] [Accepted: 10/21/2018] [Indexed: 12/16/2022] Open
Abstract
Advances in cell biology have been largely driven by pioneering work in model systems, the majority of which are from one major eukaryotic lineage, the opisthokonts. However, with the explosion of genomic information in many lineages, it has become clear that eukaryotes have incredible diversity in many cellular systems, including the cytoskeleton. By identifying model systems in diverse lineages, it may be possible to begin to understand the evolutionary origins of the eukaryotic cytoskeleton. Within the plant lineage, cell biological studies in the model moss, Physcomitrella patens, have over the past decade provided key insights into how the cytoskeleton drives cell and tissue morphology. Here, we review P. patens attributes that make it such a rich resource for cytoskeletal cell biological inquiry and highlight recent key findings with regard to intracellular transport, microtubule-actin interactions, and gene discovery that promises for many years to provide new cytoskeletal players.
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Affiliation(s)
- Shu-Zon Wu
- Department of Biological Sciences, Dartmouth College, 78 College Street, Hanover, NH, 03755, USA
| | - Moe Yamada
- Department of Biological Sciences, Dartmouth College, 78 College Street, Hanover, NH, 03755, USA
- Division of Biological Science, Graduate School of Science, Nagoya University, Furo-cho, Chikusa-ku, Nagoya, 464-8602, Japan
| | - Darren R Mallett
- Department of Biological Sciences, Dartmouth College, 78 College Street, Hanover, NH, 03755, USA
| | - Magdalena Bezanilla
- Department of Biological Sciences, Dartmouth College, 78 College Street, Hanover, NH, 03755, USA.
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41
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Haraguchi T, Ito K, Duan Z, Rula S, Takahashi K, Shibuya Y, Hagino N, Miyatake Y, Nakano A, Tominaga M. Functional Diversity of Class XI Myosins in Arabidopsis thaliana. Plant Cell Physiol 2018; 59:2268-2277. [PMID: 30398666 PMCID: PMC6217714 DOI: 10.1093/pcp/pcy147] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/11/2018] [Accepted: 07/20/2018] [Indexed: 05/24/2023]
Abstract
Plant myosin XI acts as a motive force for cytoplasmic streaming through interacting with actin filaments within the cell. Arabidopsis thaliana (At) has 13 genes belonging to the myosin XI family. Previous reverse genetic approaches suggest that At myosin XIs are partially redundant, but are functionally diverse for their specific tasks within the plant. However, the tissue-specific expression and enzymatic properties of myosin XIs have to date been poorly understood, primarily because of the difficulty in cloning and expressing large myosin XI genes and proteins. In this study, we cloned full-length cDNAs and promoter regions for all 13 At myosin XIs and identified tissue-specific expression (using promoter-reporter assays) and motile and enzymatic activities (using in vitro assays). In general, myosins belonging to the same class have similar velocities and ATPase activities. However, the velocities and ATPase activities of the 13 At myosin XIs are significantly different and are classified broadly into three groups based on velocity (high group, medium group and low group). Interestingly, the velocity groups appear roughly correlated with the tissue-specific expression patterns. Generally, ubiquitously expressed At myosin XIs belong to the medium-velocity group, pollen-specific At myosin XIs belong to the high-velocity group and only one At myosin XI (XI-I) is classified as belonging to the low-velocity group. In this study, we demonstrated the diversity of the 13 myosin XIs in Arabidopsis at the molecular and tissue levels. Our results indicate that myosin XIs in higher plants have distinct motile and enzymatic activities adapted for their specific roles.
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Affiliation(s)
- Takeshi Haraguchi
- Department of Biology, Graduate School of Science, Chiba University, Inage-ku, Chiba, Japan
| | - Kohji Ito
- Department of Biology, Graduate School of Science, Chiba University, Inage-ku, Chiba, Japan
| | - Zhongrui Duan
- Faculty of Education and Integrated Arts and Sciences, Waseda University, 2-2 Wakamatsu-cho, Shinjuku-ku, Tokyo, Japan
| | - Sa Rula
- Department of Biology, Graduate School of Science, Chiba University, Inage-ku, Chiba, Japan
| | - Kento Takahashi
- Department of Biology, Graduate School of Science, Chiba University, Inage-ku, Chiba, Japan
| | - Yuno Shibuya
- Department of Integrative Bioscience and Biomedical Engineering, Graduate School of Advanced Science and Engineering, Waseda University, 2-2 Wakamatsu-cho, Shinjuku-ku, Tokyo, Japan
| | - Nanako Hagino
- Department of Integrative Bioscience and Biomedical Engineering, Graduate School of Advanced Science and Engineering, Waseda University, 2-2 Wakamatsu-cho, Shinjuku-ku, Tokyo, Japan
| | - Yuko Miyatake
- Department of Integrative Bioscience and Biomedical Engineering, Graduate School of Advanced Science and Engineering, Waseda University, 2-2 Wakamatsu-cho, Shinjuku-ku, Tokyo, Japan
| | - Akihiko Nakano
- Department of Biological Sciences, Graduate School of Science, The University of Tokyo, Bunkyo-ku, Tokyo, Japan
- Live Cell Super-Resolution Imaging Research Team, Extreme Photonics Research Group, RIKEN Center for Advanced Photonics, Wako, Saitama, Japan
| | - Motoki Tominaga
- Faculty of Education and Integrated Arts and Sciences, Waseda University, 2-2 Wakamatsu-cho, Shinjuku-ku, Tokyo, Japan
- Department of Integrative Bioscience and Biomedical Engineering, Graduate School of Advanced Science and Engineering, Waseda University, 2-2 Wakamatsu-cho, Shinjuku-ku, Tokyo, Japan
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42
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Wu SZ, Bezanilla M. Actin and microtubule cross talk mediates persistent polarized growth. J Cell Biol 2018; 217:3531-3544. [PMID: 30061106 PMCID: PMC6168251 DOI: 10.1083/jcb.201802039] [Citation(s) in RCA: 48] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2018] [Revised: 05/08/2018] [Accepted: 07/10/2018] [Indexed: 11/25/2022] Open
Abstract
How the actin and microtubule cytoskeletons work together during diverse cellular functions is unclear. Wu et al. describe an apical actin pool in plant cells organized by a microtubule template at the site of polarized growth. Disconnecting the two cytoskeletons by removing class VIII myosins alters both cytoskeletal structures and impairs polarized growth. Coordination between actin and microtubules is important for numerous cellular processes in diverse eukaryotes. In plants, tip-growing cells require actin for cell expansion and microtubules for orientation of cell expansion, but how the two cytoskeletons are linked is an open question. In tip-growing cells of the moss Physcomitrella patens, we show that an actin cluster near the cell apex dictates the direction of rapid cell expansion. Formation of this structure depends on the convergence of microtubules near the cell tip. We discovered that microtubule convergence requires class VIII myosin function, and actin is necessary for myosin VIII–mediated focusing of microtubules. The loss of myosin VIII function affects both networks, indicating functional connections among the three cytoskeletal components. Our data suggest that microtubules direct localization of formins, actin nucleation factors, that generate actin filaments further focusing microtubules, thereby establishing a positive feedback loop ensuring that actin polymerization and cell expansion occur at a defined site resulting in persistent polarized growth.
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Affiliation(s)
- Shu-Zon Wu
- Department of Biological Sciences, Dartmouth College, Hanover, NH
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43
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Gicking AM, Swentowsky KW, Dawe RK, Qiu W. Functional diversification of the kinesin‐14 family in land plants. FEBS Lett 2018; 592:1918-1928. [DOI: 10.1002/1873-3468.13094] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/02/2018] [Revised: 04/24/2018] [Accepted: 05/05/2018] [Indexed: 01/01/2023]
Affiliation(s)
| | | | - R. Kelly Dawe
- Department of Plant Biology University of Georgia Athens GA USA
- Department of Genetics University of Georgia Athens GA USA
| | - Weihong Qiu
- Department of Physics Oregon State University Corvallis OR USA
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44
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Ding X, Pervere LM, Bascom C, Bibeau JP, Khurana S, Butt AM, Orr RG, Flaherty PJ, Bezanilla M, Vidali L. Conditional genetic screen in Physcomitrella patens reveals a novel microtubule depolymerizing-end-tracking protein. PLoS Genet 2018; 14:e1007221. [PMID: 29746462 PMCID: PMC5944918 DOI: 10.1371/journal.pgen.1007221] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/29/2017] [Accepted: 01/24/2018] [Indexed: 11/19/2022] Open
Abstract
Our ability to identify genes that participate in cell growth and division is limited because their loss often leads to lethality. A solution to this is to isolate conditional mutants where the phenotype is visible under restrictive conditions. Here, we capitalize on the haploid growth-phase of the moss Physcomitrella patens to identify conditional loss-of-growth (CLoG) mutants with impaired growth at high temperature. We used whole-genome sequencing of pooled segregants to pinpoint the lesion of one of these mutants (clog1) and validated the identified mutation by rescuing the conditional phenotype by homologous recombination. We found that CLoG1 is a novel and ancient gene conserved in plants. At the restrictive temperature, clog1 plants have smaller cells but can complete cell division, indicating an important role of CLoG1 in cell growth, but not an essential role in cell division. Fluorescent protein fusions of CLoG1 indicate it is localized to microtubules with a bias towards depolymerizing microtubule ends. Silencing CLoG1 decreases microtubule dynamics, suggesting that CLoG1 plays a critical role in regulating microtubule dynamics. By discovering a novel gene critical for plant growth, our work demonstrates that P. patens is an excellent genetic system to study genes with a fundamental role in plant cell growth.
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Affiliation(s)
- Xinxin Ding
- Department of Biology and Biotechnology, Worcester Polytechnic Institute, Worcester, MA
- Bioinformatics and Computational Biology Program, Worcester Polytechnic Institute, Worcester, MA
| | - Leah M. Pervere
- Department of Biology and Biotechnology, Worcester Polytechnic Institute, Worcester, MA
- Bioinformatics and Computational Biology Program, Worcester Polytechnic Institute, Worcester, MA
| | - Carl Bascom
- Plant Biology Graduate Program, University of Massachusetts, Amherst, MA
- Department of Biological Sciences, Dartmouth College, Hanover, NH
| | - Jeffrey P. Bibeau
- Department of Biology and Biotechnology, Worcester Polytechnic Institute, Worcester, MA
| | - Sakshi Khurana
- Department of Biology and Biotechnology, Worcester Polytechnic Institute, Worcester, MA
| | - Allison M. Butt
- Department of Biology and Biotechnology, Worcester Polytechnic Institute, Worcester, MA
| | - Robert G. Orr
- Department of Biology and Biotechnology, Worcester Polytechnic Institute, Worcester, MA
| | - Patrick J. Flaherty
- Bioinformatics and Computational Biology Program, Worcester Polytechnic Institute, Worcester, MA
- Department of Mathematics and Statistics, University of Massachusetts, Amherst, MA
- Department of Biomedical Engineering, Worcester Polytechnic Institute, Worcester, MA
| | | | - Luis Vidali
- Department of Biology and Biotechnology, Worcester Polytechnic Institute, Worcester, MA
- Bioinformatics and Computational Biology Program, Worcester Polytechnic Institute, Worcester, MA
- * E-mail:
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45
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Abstract
Kinesins and myosins are motor proteins that can move actively along microtubules and actin filaments, respectively. Plants have evolved a unique set of motors that function as regulators and organizers of the cytoskeleton and as drivers of long-distance transport of various cellular components. Recent progress has established the full complement of motors encoded in plant genomes and has revealed valuable insights into the cellular functions of many kinesin and myosin isoforms. Interestingly, several of the motors were found to functionally connect the two cytoskeletal systems and thereby to coordinate their activities. In this review, we discuss the available genetic, cell biological, and biochemical data for each of the plant kinesin and myosin families from the context of their subcellular mechanism of action as well as their physiological function in the whole plant. We particularly emphasize work that illustrates mechanisms by which kinesins and myosins coordinate the activities of the cytoskeletal system.
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Affiliation(s)
- Andreas Nebenführ
- Department of Biochemistry and Cellular and Molecular Biology, University of Tennessee, Knoxville, Tennessee 37996-0840, USA;
| | - Ram Dixit
- Department of Biology and Center for Engineering Mechanobiology, Washington University, St. Louis, Missouri 63130-4899, USA;
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46
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van Gisbergen PAC, Wu SZ, Chang M, Pattavina KA, Bartlett ME, Bezanilla M. An ancient Sec10-formin fusion provides insights into actin-mediated regulation of exocytosis. J Cell Biol 2018; 217:945-957. [PMID: 29374070 PMCID: PMC5839782 DOI: 10.1083/jcb.201705084] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/12/2017] [Revised: 12/21/2017] [Accepted: 01/08/2018] [Indexed: 11/22/2022] Open
Abstract
Interactions between actin nucleators and the exocyst in yeast and mammals control membrane remodeling. van Gisbergen et al. now describe For1F, a fusion of an exocyst subunit (Sec10) and an actin nucleation factor (formin), retained in the moss lineage for more than 170 million years, which provides unique insight into the regulation of exocytosis by actin. Exocytosis, facilitated by the exocyst, is fundamentally important for remodeling cell walls and membranes. Here, we analyzed For1F, a novel gene that encodes a fusion of an exocyst subunit (Sec10) and an actin nucleation factor (formin). We showed that the fusion occurred early in moss evolution and has been retained for more than 170 million years. In Physcomitrella patens, For1F is essential, and the expressed protein is a fusion of Sec10 and formin. Reduction of For1F or actin filaments inhibits exocytosis, and For1F dynamically associates with Sec6, another exocyst subunit, in an actin-dependent manner. Complementation experiments demonstrate that constitutive expression of either half of the gene or the paralogous Sec10b rescues loss of For1F, suggesting that fusion of the two domains is not essential, consistent with findings in yeast, where formin and the exocyst are linked noncovalently. Although not essential, the fusion may have had selective advantages and provides a unique opportunity to probe actin regulation of exocytosis.
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Affiliation(s)
| | - Shu-Zon Wu
- Biological Sciences Department, Dartmouth College, Hanover, NH
| | - Mingqin Chang
- Biological Sciences Department, Dartmouth College, Hanover, NH.,Plant Biology Graduate Program, University of Massachusetts Amherst, Amherst, MA
| | - Kelli A Pattavina
- Molecular and Cellular Biology Graduate Program, University of Massachusetts Amherst, Amherst, MA
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47
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Tran ML, McCarthy TW, Sun H, Wu SZ, Norris JH, Bezanilla M, Vidali L, Anderson CT, Roberts AW. Direct observation of the effects of cellulose synthesis inhibitors using live cell imaging of Cellulose Synthase (CESA) in Physcomitrella patens. Sci Rep 2018; 8:735. [PMID: 29335590 DOI: 10.1038/s41598-017-18994-4] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2017] [Accepted: 12/19/2017] [Indexed: 12/17/2022] Open
Abstract
Results from live cell imaging of fluorescently tagged Cellulose Synthase (CESA) proteins in Cellulose Synthesis Complexes (CSCs) have enhanced our understanding of cellulose biosynthesis, including the mechanisms of action of cellulose synthesis inhibitors. However, this method has been applied only in Arabidopsis thaliana and Brachypodium distachyon thus far. Results from freeze fracture electron microscopy of protonemal filaments of the moss Funaria hygrometrica indicate that a cellulose synthesis inhibitor, 2,6-dichlorobenzonitrile (DCB), fragments CSCs and clears them from the plasma membrane. This differs from Arabidopsis, in which DCB causes CSC accumulation in the plasma membrane and a different cellulose synthesis inhibitor, isoxaben, clears CSCs from the plasma membrane. In this study, live cell imaging of the moss Physcomitrella patens indicated that DCB and isoxaben have little effect on protonemal growth rates, and that only DCB causes tip rupture. Live cell imaging of mEGFP-PpCESA5 and mEGFP-PpCESA8 showed that DCB and isoxaben substantially reduced CSC movement, but had no measureable effect on CSC density in the plasma membrane. These results suggest that DCB and isoxaben have similar effects on CSC movement in P. patens and Arabidopsis, but have different effects on CSC intracellular trafficking, cell growth and cell integrity in these divergent plant lineages.
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48
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Sun H, Furt F, Vidali L. Myosin XI localizes at the mitotic spindle and along the cell plate during plant cell division in Physcomitrella patens. Biochem Biophys Res Commun 2018; 506:409-421. [PMID: 29339158 DOI: 10.1016/j.bbrc.2018.01.082] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2017] [Accepted: 01/11/2018] [Indexed: 01/08/2023]
Abstract
Cell division is a fundamental biological process that has been extensively investigated in different systems. Similar to most eukaryotic cells, plant cells assemble a mitotic spindle to separate replicated chromosomes. In contrast, to complete cell division, plant cells assemble a phragmoplast, which is composed of aligned microtubules and actin filaments. This structure helps transport vesicles containing new cell wall material, which then fuse to form the cell plate; the cell plate will expand to create the new dividing cell wall. Because vesicles are known to be transported by myosin motors during interphase, we hypothesized this could also be the case during cell division and we investigated the localization of the plant homologue of myosin V - myosin XI, in cell division. In this work, we used the protonemal cells of the moss Physcomitrella patens as a model, because of its simple cellular morphology and ease to generate transgenic cell lines expressing fluorescent tagged proteins. Using a fluorescent protein fusion of myosin XI, we found that, during mitosis, this molecule appears to associate with the kinetochores immediately after nuclear envelope breakdown. Following metaphase, myosin XI stays associated with the spindle's midzone during the rest of mitosis, and when the phragmoplast is formed, it concentrates at the cell plate. Using an actin polymerization inhibitor, latrunculin B, we found that the association of myosin XI with the mitotic spindle and the phragmoplast are only partially dependent on the presence of filamentous actin. We also showed that myosin XI on the spindle partially overlaps with a v-SNARE vesicle marker but is not co-localized with the endoplasmic reticulum and a RabA vesicle marker. These observations suggest an actin-dependent and an actin-independent behavior of myosin XI during cell division, and provide novel insights to our understanding of the function of myosin XI during plant cell division.
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Affiliation(s)
- Hao Sun
- Department of Biology and Biotechnology, Worcester Polytechnic Institute, Worcester, MA 01609, USA
| | - Fabienne Furt
- Department of Biology and Biotechnology, Worcester Polytechnic Institute, Worcester, MA 01609, USA
| | - Luis Vidali
- Department of Biology and Biotechnology, Worcester Polytechnic Institute, Worcester, MA 01609, USA.
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49
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Abstract
Actin is one of the three major cytoskeletal components in eukaryotic cells. Myosin XI is an actin-based motor protein in plant cells. Organelles are attached to myosin XI and translocated along the actin filaments. This dynamic actin-myosin XI system plays a major role in subcellular organelle transport and cytoplasmic streaming. Previous studies have revealed that myosin-driven transport and the actin cytoskeleton play essential roles in plant cell growth. Recent data have indicated that the actin-myosin XI cytoskeleton is essential for not only cell growth but also reproductive processes and responses to the environment. In this review, we have summarized previous reports regarding the role of the actin-myosin XI cytoskeleton in cytoplasmic streaming and plant development and recent advances in the understanding of the functions of actin-myosin XI cytoskeleton in Arabidopsis thaliana.
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Affiliation(s)
- Zhongrui Duan
- Faculty of Education and Integrated Arts and Sciences, Waseda University, 2-2 Wakamatsu-cho, Shinjuku-ku, Tokyo, 162-8480, Japan
| | - Motoki Tominaga
- Faculty of Education and Integrated Arts and Sciences, Waseda University, 2-2 Wakamatsu-cho, Shinjuku-ku, Tokyo, 162-8480, Japan; Major in Integrative Bioscience and Biomedical Engineering, Graduate School of Science and Engineering, Waseda University, 2-2 Wakamatsu-cho, Shinjuku-ku, Tokyo, 162-8480, Japan.
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Bibeau JP, Kingsley JL, Furt F, Tüzel E, Vidali L. F-Actin Mediated Focusing of Vesicles at the Cell Tip Is Essential for Polarized Growth. Plant Physiol 2018; 176:352-363. [PMID: 28972078 PMCID: PMC5761772 DOI: 10.1104/pp.17.00753] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/07/2017] [Accepted: 09/26/2017] [Indexed: 05/18/2023]
Abstract
F-actin has been shown to be essential for tip growth in an array of plant models, including Physcomitrella patens One hypothesis is that diffusion can transport secretory vesicles, while actin plays a regulatory role during secretion. Alternatively, it is possible that actin-based transport is necessary to overcome vesicle transport limitations to sustain secretion. Therefore, a quantitative analysis of diffusion, secretion kinetics, and cell geometry is necessary to clarify the role of actin in polarized growth. Using fluorescence recovery after photobleaching analysis, we first show that secretory vesicles move toward and accumulate at the tip in an actin-dependent manner. We then depolymerized F-actin to decouple vesicle diffusion from actin-mediated transport and measured the diffusion coefficient and concentration of vesicles. Using these values, we constructed a theoretical diffusion-based model for growth, demonstrating that with fast-enough vesicle fusion kinetics, diffusion could support normal cell growth rates. We further refined our model to explore how experimentally extrapolated vesicle fusion kinetics and the size of the secretion zone limit diffusion-based growth. This model predicts that diffusion-mediated growth is dependent on the size of the region of exocytosis at the tip and that diffusion-based growth would be significantly slower than normal cell growth. To further explore the size of the secretion zone, we used a cell wall degradation enzyme cocktail and determined that the secretion zone is smaller than 6 μm in diameter at the tip. Taken together, our results highlight the requirement for active transport in polarized growth and provide important insight into vesicle secretion during tip growth.
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Affiliation(s)
- Jeffrey P Bibeau
- Department of Biology and Biotechnology, Worcester Polytechnic Institute, Worcester, Massachusetts 01609
| | - James L Kingsley
- Department of Physics, Worcester Polytechnic Institute, Worcester, Massachusetts 01609
| | - Fabienne Furt
- Department of Biology and Biotechnology, Worcester Polytechnic Institute, Worcester, Massachusetts 01609
| | - Erkan Tüzel
- Department of Physics, Worcester Polytechnic Institute, Worcester, Massachusetts 01609
| | - Luis Vidali
- Department of Biology and Biotechnology, Worcester Polytechnic Institute, Worcester, Massachusetts 01609
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