1
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Strauss AT, Hobbie SE, Reich PB, Seabloom EW, Borer ET. The effect of diversity on disease reverses from dilution to amplification in a 22-year biodiversity × N × CO 2 experiment. Sci Rep 2024; 14:10938. [PMID: 38740878 DOI: 10.1038/s41598-024-60725-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2023] [Accepted: 04/26/2024] [Indexed: 05/16/2024] Open
Abstract
Plant disease often increases with N, decreases with CO2, and increases as biodiversity is lost (i.e., the dilution effect). Additionally, all these factors can indirectly alter disease by changing host biomass and hence density-dependent disease transmission. Yet over long periods of time as communities undergo compositional changes, these biomass-mediated pathways might fade, intensify, or even reverse in direction. Using a field experiment that has manipulated N, CO2, and species richness for over 20 years, we compared severity of a specialist rust fungus (Puccinia andropogonis) on its grass host (Andropogon gerardii) shortly after the experiment began (1999) and twenty years later (2019). Between these two sampling periods, two decades apart, we found that disease severity consistently increased with N and decreased with CO2. However, the relationship between diversity and disease reversed from a dilution effect in 1999 (more severe disease in monocultures) to an amplification effect in 2019 (more severe disease in mixtures). The best explanation for this reversal centered on host density (i.e., aboveground biomass), which was initially highest in monoculture, but became highest in mixtures two decades later. Thus, the diversity-disease pattern reversed, but disease consistently increased with host biomass. These results highlight the consistency of N and CO2 as drivers of plant disease in the Anthropocene and emphasize the critical role of host biomass-despite potentially variable effects of diversity-for relationships between biodiversity and disease.
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Affiliation(s)
- Alexander T Strauss
- Department of Ecology, Evolution, and Behavior, University of Minnesota, St. Paul, MN, USA.
- Odum School of Ecology, University of Georgia, Athens, GA, USA.
- Center for the Ecology of Infectious Diseases, University of Georgia, Athens, GA, USA.
| | - Sarah E Hobbie
- Department of Ecology, Evolution, and Behavior, University of Minnesota, St. Paul, MN, USA
| | - Peter B Reich
- Department of Forest Resources, University of Minnesota, St. Paul, MN, USA
- Hawkesbury Institute for the Environment, Western Sydney University, Penrith, NSW, Australia
- Institute for Global Change Biology and School for Environment and Sustainability, University of Michigan, Ann Arbor, MI, USA
| | - Eric W Seabloom
- Department of Ecology, Evolution, and Behavior, University of Minnesota, St. Paul, MN, USA
| | - Elizabeth T Borer
- Department of Ecology, Evolution, and Behavior, University of Minnesota, St. Paul, MN, USA
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2
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Laine AL, Tylianakis JM. The coevolutionary consequences of biodiversity change. Trends Ecol Evol 2024:S0169-5347(24)00084-3. [PMID: 38705768 DOI: 10.1016/j.tree.2024.04.002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/19/2023] [Revised: 04/03/2024] [Accepted: 04/05/2024] [Indexed: 05/07/2024]
Abstract
Coevolutionary selection is a powerful process shaping species interactions and biodiversity. Anthropogenic global environmental change is reshaping planetary biodiversity, including by altering the structure and intensity of interspecific interactions. However, remarkably little is understood of how coevolutionary selection is changing in the process. Here, we outline three interrelated pathways - change in evolutionary potential, change in community composition, and shifts in interaction trait distributions - that are expected to redirect coevolutionary selection under biodiversity change. Assessing how both ecological and evolutionary rules governing species interactions are disrupted under anthropogenic global change is of paramount importance to understand the past, present, and future of Earth's biodiversity.
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Affiliation(s)
- Anna-Liisa Laine
- Organismal and Evolutionary Biology Research Programme, Faculty of Biological and Environmental Sciences, Viikinkaari 1 (PO Box 65), University of Helsinki, FI-00014 Helsinki, Finland.
| | - Jason M Tylianakis
- Bioprotection Aotearoa, University of Canterbury, Private Bag 4800, Christchurch 8140, New Zealand
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3
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Mahon MB, Sack A, Aleuy OA, Barbera C, Brown E, Buelow H, Civitello DJ, Cohen JM, de Wit LA, Forstchen M, Halliday FW, Heffernan P, Knutie SA, Korotasz A, Larson JG, Rumschlag SL, Selland E, Shepack A, Vincent N, Rohr JR. A meta-analysis on global change drivers and the risk of infectious disease. Nature 2024; 629:830-836. [PMID: 38720068 DOI: 10.1038/s41586-024-07380-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2022] [Accepted: 04/03/2024] [Indexed: 05/24/2024]
Abstract
Anthropogenic change is contributing to the rise in emerging infectious diseases, which are significantly correlated with socioeconomic, environmental and ecological factors1. Studies have shown that infectious disease risk is modified by changes to biodiversity2-6, climate change7-11, chemical pollution12-14, landscape transformations15-20 and species introductions21. However, it remains unclear which global change drivers most increase disease and under what contexts. Here we amassed a dataset from the literature that contains 2,938 observations of infectious disease responses to global change drivers across 1,497 host-parasite combinations, including plant, animal and human hosts. We found that biodiversity loss, chemical pollution, climate change and introduced species are associated with increases in disease-related end points or harm, whereas urbanization is associated with decreases in disease end points. Natural biodiversity gradients, deforestation and forest fragmentation are comparatively unimportant or idiosyncratic as drivers of disease. Overall, these results are consistent across human and non-human diseases. Nevertheless, context-dependent effects of the global change drivers on disease were found to be common. The findings uncovered by this meta-analysis should help target disease management and surveillance efforts towards global change drivers that increase disease. Specifically, reducing greenhouse gas emissions, managing ecosystem health, and preventing biological invasions and biodiversity loss could help to reduce the burden of plant, animal and human diseases, especially when coupled with improvements to social and economic determinants of health.
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Affiliation(s)
- Michael B Mahon
- Department of Biological Sciences, University of Notre Dame, Notre Dame, IN, USA
- Environmental Change Initiative, University of Notre Dame, Notre Dame, IN, USA
| | - Alexandra Sack
- Department of Biological Sciences, University of Notre Dame, Notre Dame, IN, USA
- Eck Institute of Global Health, University of Notre Dame, Notre Dame, IN, USA
| | - O Alejandro Aleuy
- Department of Biological Sciences, University of Notre Dame, Notre Dame, IN, USA
| | - Carly Barbera
- Department of Biological Sciences, University of Notre Dame, Notre Dame, IN, USA
| | - Ethan Brown
- Department of Biological Sciences, University of Notre Dame, Notre Dame, IN, USA
| | - Heather Buelow
- Department of Biological Sciences, University of Notre Dame, Notre Dame, IN, USA
| | | | - Jeremy M Cohen
- Department of Ecology and Evolutionary Biology, Yale University, New Haven, CT, USA
| | - Luz A de Wit
- Department of Biological Sciences, University of Notre Dame, Notre Dame, IN, USA
| | - Meghan Forstchen
- Department of Biological Sciences, University of Notre Dame, Notre Dame, IN, USA
- Eck Institute of Global Health, University of Notre Dame, Notre Dame, IN, USA
| | - Fletcher W Halliday
- Department of Botany and Plant Pathology, Oregon State University, Corvallis, OR, USA
| | - Patrick Heffernan
- Department of Biological Sciences, University of Notre Dame, Notre Dame, IN, USA
| | - Sarah A Knutie
- Department of Ecology and Evolutionary Biology, Institute for Systems Genomics, University of Connecticut, Storrs, CT, USA
| | - Alexis Korotasz
- Department of Biological Sciences, University of Notre Dame, Notre Dame, IN, USA
| | - Joanna G Larson
- Department of Biological Sciences, University of Notre Dame, Notre Dame, IN, USA
| | - Samantha L Rumschlag
- Department of Biological Sciences, University of Notre Dame, Notre Dame, IN, USA
- Environmental Change Initiative, University of Notre Dame, Notre Dame, IN, USA
| | - Emily Selland
- Department of Biological Sciences, University of Notre Dame, Notre Dame, IN, USA
- Eck Institute of Global Health, University of Notre Dame, Notre Dame, IN, USA
| | - Alexander Shepack
- Department of Biological Sciences, University of Notre Dame, Notre Dame, IN, USA
| | - Nitin Vincent
- Department of Biological Sciences, University of Notre Dame, Notre Dame, IN, USA
| | - Jason R Rohr
- Department of Biological Sciences, University of Notre Dame, Notre Dame, IN, USA.
- Environmental Change Initiative, University of Notre Dame, Notre Dame, IN, USA.
- Eck Institute of Global Health, University of Notre Dame, Notre Dame, IN, USA.
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4
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Zhang P, Jiang H, Liu X. Diversity inhibits foliar fungal diseases in grasslands: Potential mechanisms and temperature dependence. Ecol Lett 2024; 27:e14435. [PMID: 38735857 DOI: 10.1111/ele.14435] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/15/2024] [Revised: 03/18/2024] [Accepted: 04/22/2024] [Indexed: 05/14/2024]
Abstract
A long-standing debate exists among ecologists as to how diversity regulates infectious diseases (i.e., the nature of diversity-disease relationships); a dilution effect refers to when increasing host diversity inhibits infectious diseases (i.e., negative diversity-disease relationships). However, the generality, strength, and potential mechanisms underlying negative diversity-disease relationships in natural ecosystems remain unclear. To this end, we conducted a large-scale survey of 63 grassland sites across China to explore diversity-disease relationships. We found widespread negative diversity-disease relationships that were temperature-dependent; non-random diversity loss played a fundamental role in driving these patterns. Our study provides field evidence for the generality and temperature dependence of negative diversity-disease relationships in grasslands, becoming stronger in colder regions, while also highlighting the role of non-random diversity loss as a mechanism. These findings have important implications for community ecology, disease ecology, and epidemic control.
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Affiliation(s)
- Peng Zhang
- State Key Laboratory of Herbage Improvement and Grassland Agro-Ecosystems, College of Ecology, Lanzhou University, Lanzhou, P. R. China
| | - Hongying Jiang
- State Key Laboratory of Herbage Improvement and Grassland Agro-Ecosystems, College of Ecology, Lanzhou University, Lanzhou, P. R. China
| | - Xiang Liu
- State Key Laboratory of Herbage Improvement and Grassland Agro-Ecosystems, College of Ecology, Lanzhou University, Lanzhou, P. R. China
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5
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Meyer M, Melville DW, Baldwin HJ, Wilhelm K, Nkrumah EE, Badu EK, Oppong SK, Schwensow N, Stow A, Vallo P, Corman VM, Tschapka M, Drosten C, Sommer S. Bat species assemblage predicts coronavirus prevalence. Nat Commun 2024; 15:2887. [PMID: 38575573 PMCID: PMC10994947 DOI: 10.1038/s41467-024-46979-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/19/2023] [Accepted: 03/15/2024] [Indexed: 04/06/2024] Open
Abstract
Anthropogenic disturbances and the subsequent loss of biodiversity are altering species abundances and communities. Since species vary in their pathogen competence, spatio-temporal changes in host assemblages may lead to changes in disease dynamics. We explore how longitudinal changes in bat species assemblages affect the disease dynamics of coronaviruses (CoVs) in more than 2300 cave-dwelling bats captured over two years from five caves in Ghana. This reveals uneven CoV infection patterns between closely related species, with the alpha-CoV 229E-like and SARS-related beta-CoV 2b emerging as multi-host pathogens. Prevalence and infection likelihood for both phylogenetically distinct CoVs is influenced by the abundance of competent species and naïve subadults. Broadly, bat species vary in CoV competence, and highly competent species are more common in less diverse communities, leading to increased CoV prevalence in less diverse bat assemblages. In line with the One Health framework, our work supports the notion that biodiversity conservation may be the most proactive measure to prevent the spread of pathogens with zoonotic potential.
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Affiliation(s)
- Magdalena Meyer
- Institute of Evolutionary Ecology and Conservation Genomics, Ulm University, Ulm, Germany.
| | - Dominik W Melville
- Institute of Evolutionary Ecology and Conservation Genomics, Ulm University, Ulm, Germany
| | - Heather J Baldwin
- Institute of Evolutionary Ecology and Conservation Genomics, Ulm University, Ulm, Germany
- School of Natural Sciences, Macquarie University, Sydney, New South Wales, Australia
| | - Kerstin Wilhelm
- Institute of Evolutionary Ecology and Conservation Genomics, Ulm University, Ulm, Germany
| | - Evans Ewald Nkrumah
- Department of Wildlife and Range Management, Kwame Nkrumah University of Science and Technology, Kumasi, Ghana
| | - Ebenezer K Badu
- Department of Wildlife and Range Management, Kwame Nkrumah University of Science and Technology, Kumasi, Ghana
| | - Samuel Kingsley Oppong
- Department of Wildlife and Range Management, Kwame Nkrumah University of Science and Technology, Kumasi, Ghana
| | - Nina Schwensow
- Institute of Evolutionary Ecology and Conservation Genomics, Ulm University, Ulm, Germany
| | - Adam Stow
- School of Natural Sciences, Macquarie University, Sydney, New South Wales, Australia
| | - Peter Vallo
- Institute of Evolutionary Ecology and Conservation Genomics, Ulm University, Ulm, Germany
- Institute of Vertebrate Biology, Czech Academy of Sciences, Brno, Czech Republic
| | - Victor M Corman
- Charité - Universitätsmedizin Berlin Institute of Virology, Berlin, Germany
- German Center for Infection Research (DZIF), Berlin, Germany
| | - Marco Tschapka
- Institute of Evolutionary Ecology and Conservation Genomics, Ulm University, Ulm, Germany
| | - Christian Drosten
- Charité - Universitätsmedizin Berlin Institute of Virology, Berlin, Germany
- German Center for Infection Research (DZIF), Berlin, Germany
| | - Simone Sommer
- Institute of Evolutionary Ecology and Conservation Genomics, Ulm University, Ulm, Germany.
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6
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Johnson PTJ, Stewart Merrill TE, Dean AD, Fenton A. Diverging effects of host density and richness across biological scales drive diversity-disease outcomes. Nat Commun 2024; 15:1937. [PMID: 38431719 PMCID: PMC10908850 DOI: 10.1038/s41467-024-46091-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2023] [Accepted: 02/14/2024] [Indexed: 03/05/2024] Open
Abstract
Understanding how biodiversity affects pathogen transmission remains an unresolved question due to the challenges in testing potential mechanisms in natural systems and how these mechanisms vary across biological scales. By quantifying transmission of an entire guild of parasites (larval trematodes) within 902 amphibian host communities, we show that the community-level drivers of infection depend critically on biological scale. At the individual host scale, increases in host richness led to fewer parasites per host for all parasite taxa, with no effect of host or predator densities. At the host community scale, however, the inhibitory effects of richness were counteracted by associated increases in total host density, leading to no overall change in parasite densities. Mechanistically, we find that while average host competence declined with increasing host richness, total community competence remained stable due to additive assembly patterns. These results help reconcile disease-diversity debates by empirically disentangling the roles of alternative ecological drivers of parasite transmission and how such effects depend on biological scale.
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Affiliation(s)
- Pieter T J Johnson
- Ecology and Evolutionary Biology, University of Colorado, Boulder, CO, USA.
| | - Tara E Stewart Merrill
- Ecology and Evolutionary Biology, University of Colorado, Boulder, CO, USA
- Coastal and Marine Laboratory, Florida State University, St. Teresa, FL, USA
| | - Andrew D Dean
- Institute of Infection, Veterinary & Ecological Sciences, University of Liverpool, Liverpool, UK
| | - Andy Fenton
- Institute of Infection, Veterinary & Ecological Sciences, University of Liverpool, Liverpool, UK
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7
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Chen L, Tan Z, Kong P, Zhou Y, Zhou L. Impact of vector richness on the risk of vector-borne disease: The role of vector competence. Ecol Evol 2024; 14:e11082. [PMID: 38435018 PMCID: PMC10905232 DOI: 10.1002/ece3.11082] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/28/2023] [Revised: 12/10/2023] [Accepted: 01/09/2024] [Indexed: 03/05/2024] Open
Abstract
A central goal of disease ecology is to identify the factors that drive the spread of infectious diseases. Changes in vector richness can have complex effects on disease risk, but little is known about the role of vector competence in the relationship between vector richness and disease risk. In this study, we firstly investigated the combined effects of vector competence, interspecific competition, and feeding interference on disease risk through a two-vector, one-host SIR-SI model, and obtained threshold conditions for the occurrence of dilution and amplification effects. Secondly, we extended the above model to the case of N vectors and assumed that all vectors were homogeneous to obtain analytic expressions for disease risk. It was found that in the two-vector model, disease risk declined more rapidly as interspecific competition of the high-competence vector increased. When vector richness increases, the positive effects of adding a high-competence vector species on disease transmission may outweigh the negative effects of feeding interference due to increased vector richness, making an amplification effect more likely to occur. While the addition of a highly competitive vector species may exacerbate the negative effects of feeding interference, making a dilution effect more likely to occur. In the N-vector model, the effect of increased vector richness on disease risk was fully driven by the strength of feeding interference and interspecific competition, and changes in vector competence only quantitatively but not qualitatively altered the vector richness-disease risk relationship. This work clarifies the role of vector competence in the relationship between vector richness and disease risk and provides a new perspective for studying the diversity-disease relationship. It also provides theoretical guidance for vector management and disease prevention strategies.
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Affiliation(s)
- Lifan Chen
- School of Arts and SciencesShanghai University of Medicine and Health SciencesShanghaiChina
| | - Zhiying Tan
- School of Health Science and EngineeringUniversity of Shanghai for Science and TechnologyShanghaiChina
| | - Ping Kong
- School of Arts and SciencesShanghai University of Medicine and Health SciencesShanghaiChina
| | - Yanli Zhou
- School of Arts and SciencesShanghai University of Medicine and Health SciencesShanghaiChina
| | - Liang Zhou
- Collaborative Innovation Center for BiomedicineShanghai University of Medicine and Health SciencesShanghaiChina
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8
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Fleischer R, Eibner GJ, Schwensow NI, Pirzer F, Paraskevopoulou S, Mayer G, Corman VM, Drosten C, Wilhelm K, Heni AC, Sommer S, Schmid DW. Immunogenetic-pathogen networks shrink in Tome's spiny rat, a generalist rodent inhabiting disturbed landscapes. Commun Biol 2024; 7:169. [PMID: 38341501 PMCID: PMC10858909 DOI: 10.1038/s42003-024-05870-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/10/2023] [Accepted: 01/29/2024] [Indexed: 02/12/2024] Open
Abstract
Anthropogenic disturbance may increase the emergence of zoonoses. Especially generalists that cope with disturbance and live in close contact with humans and livestock may become reservoirs of zoonotic pathogens. Yet, whether anthropogenic disturbance modifies host-pathogen co-evolutionary relationships in generalists is unknown. We assessed pathogen diversity, neutral genome-wide diversity (SNPs) and adaptive MHC class II diversity in a rodent generalist inhabiting three lowland rainforest landscapes with varying anthropogenic disturbance, and determined which MHC alleles co-occurred more frequently with 13 gastrointestinal nematodes, blood trypanosomes, and four viruses. Pathogen-specific selection pressures varied between landscapes. Genome-wide diversity declined with the degree of disturbance, while MHC diversity was only reduced in the most disturbed landscape. Furthermore, pristine forest landscapes had more functional important MHC-pathogen associations when compared to disturbed forests. We show co-evolutionary links between host and pathogens impoverished in human-disturbed landscapes. This underscores that parasite-mediated selection might change even in generalist species following human disturbance which in turn may facilitate host switching and the emergence of zoonoses.
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Affiliation(s)
- Ramona Fleischer
- Institute of Evolutionary Ecology and Conservation Genomics, University of Ulm, Ulm, Germany
| | - Georg Joachim Eibner
- Institute of Evolutionary Ecology and Conservation Genomics, University of Ulm, Ulm, Germany
- Smithsonian Tropical Research Institute, Panamá, República de Panamá
- Institute of Virology, Charité-Universitätsmedizin Berlin, Berlin, Germany
| | - Nina Isabell Schwensow
- Institute of Evolutionary Ecology and Conservation Genomics, University of Ulm, Ulm, Germany
| | - Fabian Pirzer
- Institute of Virology, Charité-Universitätsmedizin Berlin, Berlin, Germany
| | | | - Gerd Mayer
- Institute of Evolutionary Ecology and Conservation Genomics, University of Ulm, Ulm, Germany
| | - Victor Max Corman
- Institute of Virology, Charité-Universitätsmedizin Berlin, Berlin, Germany
- Robert Koch Institute, Nordufer 20, Berlin, 13353, Germany
| | - Christian Drosten
- Institute of Virology, Charité-Universitätsmedizin Berlin, Berlin, Germany
- Robert Koch Institute, Nordufer 20, Berlin, 13353, Germany
- German Centre for Infection Research (DZIF), Berlin, Germany
| | - Kerstin Wilhelm
- Institute of Evolutionary Ecology and Conservation Genomics, University of Ulm, Ulm, Germany
| | - Alexander Christoph Heni
- Institute of Evolutionary Ecology and Conservation Genomics, University of Ulm, Ulm, Germany
- Smithsonian Tropical Research Institute, Panamá, República de Panamá
| | - Simone Sommer
- Institute of Evolutionary Ecology and Conservation Genomics, University of Ulm, Ulm, Germany.
| | - Dominik Werner Schmid
- Institute of Evolutionary Ecology and Conservation Genomics, University of Ulm, Ulm, Germany
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9
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Welsh JE, Markovic M, van der Meer J, Thieltges DW. Non-linear effects of non-host diversity on the removal of free-living infective stages of parasites. Oecologia 2024; 204:339-349. [PMID: 38300256 PMCID: PMC10907414 DOI: 10.1007/s00442-023-05462-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/11/2023] [Accepted: 09/26/2023] [Indexed: 02/02/2024]
Abstract
Among the ecological functions and services of biodiversity is the potential buffering of diseases through dilution effects where increased biodiversity results in a reduction in disease risk for humans and wildlife hosts. Whether such effects are a universal phenomenon is still under intense debate and diversity effects are little studied in cases when non-host organisms remove free-living parasite stages during their transmission from one host to the next by consumption or physical obstruction. Here, we investigated non-host diversity effects on the removal of cercarial stages of trematodes, ubiquitous parasites in aquatic ecosystems. In laboratory experiments using response surface designs, varying both diversity and density at same time, we compared three combinations of two non-hosts at four density levels: predatory crabs that actively remove cercariae from the water column via their mouth parts and gills, filter feeding oysters that passively filter cercariae from the water column while not becoming infected themselves, and seaweed which physically obstructs cercariae. The addition of a second non-host did not generally result in increased parasite removal but neutralised, amplified or reduced the parasite removal exerted by the first non-host, depending on the density and non-host combination. These non-linear non-host diversity effects were probably driven by intra- and interspecific interactions and suggest the need to integrate non-host diversity effects in understanding the links between community diversity and infection risk.
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Affiliation(s)
- Jennifer E Welsh
- Department of Coastal Systems, NIOZ Royal Netherlands Institute for Sea Research, PO Box 59, 1790 AB, Den Burg, The Netherlands
| | - Mirjana Markovic
- Department of Coastal Systems, NIOZ Royal Netherlands Institute for Sea Research, PO Box 59, 1790 AB, Den Burg, The Netherlands
| | - Jaap van der Meer
- Wageningen Marine Research, Korringaweg 7, 4401 NT, Yerseke, The Netherlands
- Aquaculture and Fisheries Group, Wageningen University and Research, Wageningen, The Netherlands
| | - David W Thieltges
- Department of Coastal Systems, NIOZ Royal Netherlands Institute for Sea Research, PO Box 59, 1790 AB, Den Burg, The Netherlands.
- Groningen Institute for Evolutionary Life-Sciences, GELIFES, University of Groningen, Nijenborgh 7, 9747 AG, Groningen, The Netherlands.
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10
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Gougherty AV, Davies TJ. Evolutionary history of host trees amplifies the dilution effect of biodiversity on forest pests. PLoS Biol 2024; 22:e3002473. [PMID: 38412281 PMCID: PMC10898760 DOI: 10.1371/journal.pbio.3002473] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/05/2023] [Accepted: 12/14/2023] [Indexed: 02/29/2024] Open
Abstract
Biodiversity appears to strongly suppress pathogens and pests in many plant and animal systems. However, this "dilution effect" is not consistently detected, and when present can vary strikingly in magnitude. Here, we use forest inventory data from over 25,000 plots (>1.1 million sampled trees) to quantify the strength of the dilution effect on dozens of forest pests and clarify why some pests are particularly sensitive to biodiversity. Using Bayesian hierarchical models, we show that pest prevalence is frequently lower in highly diverse forests, but there is considerable variability in the magnitude of this dilution effect among pests. The strength of dilution was not closely associated with host specialization or pest nativity. Instead, pest prevalence was lower in forests where co-occurring tree species were more distantly related to a pest's preferred hosts. Our analyses indicate that host evolutionary history and forest composition are key to understanding how species diversity may dilute the impacts of tree pests, with important implications for predicting how future biodiversity change may affect the spread and distribution of damaging forest pests.
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Affiliation(s)
- Andrew V. Gougherty
- USDA Forest Service, Northern Research Station, Delaware, Ohio, United States of America
- Department of Botany, University of British Columbia, Vancouver, Canada
| | - T. Jonathan Davies
- Department of Botany, University of British Columbia, Vancouver, Canada
- Department of Forest & Conservation Sciences, University of British Columbia, Vancouver, Canada
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11
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Pagenkopp Lohan KM, Gignoux-Wolfsohn SA, Ruiz GM. Biodiversity differentially impacts disease dynamics across marine and terrestrial habitats. Trends Parasitol 2024; 40:106-117. [PMID: 38212198 DOI: 10.1016/j.pt.2023.12.004] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2021] [Revised: 12/07/2023] [Accepted: 12/12/2023] [Indexed: 01/13/2024]
Abstract
The relationship between biodiversity and infectious disease, where increased biodiversity leads to decreased disease risk, originated from research in terrestrial disease systems and remains relatively underexplored in marine systems. Understanding the impacts of biodiversity on disease in marine versus terrestrial systems is key to continued marine ecosystem functioning, sustainable aquaculture, and restoration projects. We compare the biodiversity-disease relationship across terrestrial and marine systems, considering biodiversity at six levels: intraspecific host diversity, host microbiomes, interspecific host diversity, biotic vectors and reservoirs, parasite consumers, and parasites. We highlight gaps in knowledge regarding how these six levels of biodiversity impact diseases in marine systems and propose two model systems, the Perkinsus-oyster and Labyrinthula-seagrass systems, to address these gaps.
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Affiliation(s)
- Katrina M Pagenkopp Lohan
- Coastal Disease Ecology Laboratory, Smithsonian Environmental Research Center, Edgewater, MD 21037, USA.
| | - Sarah A Gignoux-Wolfsohn
- Coastal Disease Ecology Laboratory, Smithsonian Environmental Research Center, Edgewater, MD 21037, USA; Current address: Biological Sciences, University of Massachusetts Lowell, Lowell, MA, USA
| | - Gregory M Ruiz
- Marine Invasions Research Laboratory, Smithsonian Environmental Research Center, Edgewater, MD 21037, USA
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12
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Brian JI, Aldridge DC. Host and parasite identity interact in scale-dependent fashion to determine parasite community structure. Oecologia 2024; 204:199-211. [PMID: 38206416 PMCID: PMC10830602 DOI: 10.1007/s00442-023-05499-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/11/2022] [Accepted: 12/10/2023] [Indexed: 01/12/2024]
Abstract
Understanding the ecological assembly of parasite communities is critical to characterise how changing host and environmental landscapes will alter infection dynamics and outcomes. However, studies frequently assume that (a) closely related parasite species or those with identical life-history strategies are functionally equivalent, and (b) the same factors will drive infection dynamics for a single parasite across multiple host species, oversimplifying community assembly patterns. Here, we challenge these two assumptions using a naturally occurring host-parasite system, with the mussel Anodonta anatina infected by the digenean trematode Echinoparyphium recurvatum, and the snail Viviparus viviparus infected by both E. recurvatum and Echinostoma sp. By analysing the impact of temporal parasite dispersal, host species and size, and the impact of coinfection (moving from broader environmental factors to within-host dynamics), we show that neither assumption holds true, but at different ecological scales. The assumption that closely related parasites can be functionally grouped is challenged when considering dispersal to the host (i.e. larger scales), while the assumption that the same factors will drive infection dynamics for a single parasite across multiple host species is challenged when considering within-host interspecific competition (i.e. smaller scales). Our results demonstrate that host identity, parasite identity and ecological scale require simultaneous consideration in studies of parasite community composition and transmission.
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Affiliation(s)
- Joshua I Brian
- Aquatic Ecology Group, Department of Zoology, University of Cambridge, The David Attenborough Building, Cambridge, CB2 3QZ, UK.
- Department of Geography, Bush House North East, King's College London, London, WC2B 4BG, UK.
| | - David C Aldridge
- Aquatic Ecology Group, Department of Zoology, University of Cambridge, The David Attenborough Building, Cambridge, CB2 3QZ, UK
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13
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Maroli M, Bellomo CM, Coelho RM, Martinez VP, Piña CI, Gómez Villafañe IE. Orthohantavirus Infection in Two Rodent Species that Inhabit Wetlands in Argentina. ECOHEALTH 2023; 20:402-415. [PMID: 38091181 DOI: 10.1007/s10393-023-01661-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/23/2022] [Accepted: 09/30/2023] [Indexed: 02/21/2024]
Abstract
Previous research conducted in central-east region of Argentina recorded potential orthohantavirus host rodents in diverse environments, but no research has focused particularly on islands, the environments that present the greatest risk to humans. For this reason, the aims of this research were to determine the orthohantavirus host in the rodent community focused on islands of Paraná River Delta, central-east region of Argentina, to identify temporal and spatial factors associated with orthohantavirus prevalence variations, to compare the functional traits of seropositive and seronegative rodents, and to explore the association between orthohantavirus prevalence and rodent community characteristics between August 2014 and May 2018. With a trapping effort of 14,600 trap-nights, a total of 348 sigmodontine rodent specimens belonging to seven species were captured 361 times. The overall antibody prevalence was 4.9%. Particularly, 14.9% of Oligoryzomys flavescens and 1.5% of Oxymycterus rufus, mainly reproductively active adult males, had antibodies against orthohantavirus. Even though O. flavescens inhabit all islands, our results suggest spatial heterogeneity in the viral distribution, with two months after periods of low temperature presenting increases in seroprevalence. This could be a response to the increased proportion of adults present in the rodent population. In addition, an association was found between the high seroprevalence and the diversity of the rodent assemblage. We also found 1.5% of O. rufus exposed to orthohantavirus, which shows us that further investigation of the ecology of the virus is needed to answer whether this species act as a spillover or a new competent host.
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Affiliation(s)
- Malena Maroli
- Facultad de Ciencia y Tecnología, Universidad Autónoma de Entre Ríos, 3105, Diamante, Entre Ríos, Argentina
| | - Carla M Bellomo
- Instituto Nacional de Enfermedades Infecciosas Administración Nacional de Laboratorios e Institutos de Salud Dr. Carlos G. Malbrán, Buenos Aires, Argentina
| | - Rocío M Coelho
- Instituto Nacional de Enfermedades Infecciosas Administración Nacional de Laboratorios e Institutos de Salud Dr. Carlos G. Malbrán, Buenos Aires, Argentina
| | - Valeria P Martinez
- Instituto Nacional de Enfermedades Infecciosas Administración Nacional de Laboratorios e Institutos de Salud Dr. Carlos G. Malbrán, Buenos Aires, Argentina
| | - Carlos I Piña
- Centro de Investigación Científica y de Transferencia Tecnológica a la Producción-Consejo Nacional de Investigaciones Científicas y Técnicas, Facultad de Ciencia y Tecnología, Universidad Autónoma de Entre Ríos, 3105, Diamante, Entre Ríos, Argentina
| | - Isabel E Gómez Villafañe
- Instituto de Ecología, Facultad de Ciencias Exactas y Naturales, Genética y Evolución de Buenos Aires (CONICET-UBA), Universidad de Buenos Aires, Intendente Güiraldes 2160, Ciudad Universitaria, C1428EGA, Ciudad Autónoma de Buenos Aires, Argentina.
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14
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Roque FDO, Bellón B, Guerra A, Valente-Neto F, Santos CC, Melo I, Nobre Arcos A, de Oliveira AG, Valle Nunes A, de Araujo Martins C, Souza FL, Herrera H, Tavares LER, Almeida-Gomes M, Pays O, Renaud PC, Gomes Barrios SP, Yon L, Bowsher G, Sullivan R, Johnson M, Grelle CEV, Ochoa-Quintero JM. Incorporating biodiversity responses to land use change scenarios for preventing emerging zoonotic diseases in areas of unknown host-pathogen interactions. Front Vet Sci 2023; 10:1229676. [PMID: 38026639 PMCID: PMC10665965 DOI: 10.3389/fvets.2023.1229676] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2023] [Accepted: 10/16/2023] [Indexed: 12/01/2023] Open
Abstract
The need to reconcile food production, the safeguarding of nature, and the protection of public health is imperative in a world of continuing global change, particularly in the context of risks of emerging zoonotic disease (EZD). In this paper, we explored potential land use strategies to reduce EZD risks using a landscape approach. We focused on strategies for cases where the dynamics of pathogen transmission among species were poorly known and the ideas of "land-use induced spillover" and "landscape immunity" could be used very broadly. We first modeled three different land-use change scenarios in a region of transition between the Cerrado and the Atlantic Forest biodiversity hotspots. The land-use strategies used to build our scenarios reflected different proportions of native vegetation cover, as a proxy of habitat availability. We then evaluated the effects of the proportion of native vegetation cover on the occupancy probability of a group of mammal species and analyzed how the different land-use scenarios might affect the distribution of species in the landscape and thus the risk of EZD. We demonstrate that these approaches can help identify potential future EZD risks, and can thus be used as decision-making tools by stakeholders, with direct implications for improving both environmental and socio-economic outcomes.
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Affiliation(s)
- Fabio de Oliveira Roque
- Instituto de Biociências, Universidade Federal de Mato Grosso do Sul, Cidade Universitária, Campo Grande, Brazil
- Centre for Tropical Environmental and Sustainability Science (TESS) and College of Science and Engineering, James Cook University, Cairns, QLD, Australia
| | - Beatriz Bellón
- BIODIVAG, Univ Angers, Angers, France
- Department of Environmental Science, Rhodes University, Makhanda, South Africa
| | - Angélica Guerra
- Instituto de Biociências, Universidade Federal de Mato Grosso do Sul, Cidade Universitária, Campo Grande, Brazil
| | - Francisco Valente-Neto
- Instituto de Biociências, Universidade Federal de Mato Grosso do Sul, Cidade Universitária, Campo Grande, Brazil
| | - Cyntia C. Santos
- Instituto de Biociências, Universidade Federal de Mato Grosso do Sul, Cidade Universitária, Campo Grande, Brazil
- BIODIVAG, Univ Angers, Angers, France
- Wetlands International Brazil, Campo Grande, Brazil
| | - Isabel Melo
- Instituto de Biociências, Universidade Federal de Mato Grosso do Sul, Cidade Universitária, Campo Grande, Brazil
- Instituto de Investigación de Recursos Biológicos Alexander von Humboldt, Bogotá, Colombia
| | - Adriano Nobre Arcos
- Instituto de Biociências, Universidade Federal de Mato Grosso do Sul, Cidade Universitária, Campo Grande, Brazil
| | | | - André Valle Nunes
- Instituto Nacional de Pesquisa do Pantanal, Programa de Capacitação Institucional, Museu Paraense Emílio Goeldi, Cuiabá, Brazil
| | - Clarissa de Araujo Martins
- Instituto de Biociências, Universidade Federal de Mato Grosso do Sul, Cidade Universitária, Campo Grande, Brazil
- BIODIVAG, Univ Angers, Angers, France
- Wetlands International Brazil, Campo Grande, Brazil
| | - Franco L. Souza
- Instituto de Biociências, Universidade Federal de Mato Grosso do Sul, Cidade Universitária, Campo Grande, Brazil
| | - Heitor Herrera
- Universidade Católica Dom Bosco, Programa de Pós-Graduação em Ciências Ambientais e Sustentabilidade Agropecuária, Campo Grande, Brazil
| | - Luiz Eduardo R. Tavares
- Instituto de Biociências, Universidade Federal de Mato Grosso do Sul, Cidade Universitária, Campo Grande, Brazil
| | - Mauricio Almeida-Gomes
- Instituto de Biociências, Universidade Federal de Mato Grosso do Sul, Cidade Universitária, Campo Grande, Brazil
| | - Olivier Pays
- BIODIVAG, Univ Angers, Angers, France
- REHABS International Research Laboratory, CNRS-Université Lyon 1-Nelson Mandela University, George, South Africa
| | | | | | - Lisa Yon
- School of Veterinary Medicine and Science, University of Nottingham, Nottingham, United Kingdom
| | - Gemma Bowsher
- Centre for Conflict and Health, King’s College, London, United Kingdom
| | - Richard Sullivan
- Centre for Conflict and Health, King’s College, London, United Kingdom
| | - Matthew Johnson
- School of Geography, University of Nottingham, Nottingham, United Kingdom
| | - Carlos E. V. Grelle
- Department of Ecology, Universidade Federal do Rio de Janeiro (UFRJ), Campo Grande, Brazil
| | - Jose Manuel Ochoa-Quintero
- Instituto de Biociências, Universidade Federal de Mato Grosso do Sul, Cidade Universitária, Campo Grande, Brazil
- Instituto de Investigación de Recursos Biológicos Alexander von Humboldt, Bogotá, Colombia
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15
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Hu B, Han S, He H. Effect of epidemic diseases on wild animal conservation. Integr Zool 2023; 18:963-980. [PMID: 37202360 DOI: 10.1111/1749-4877.12720] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/20/2023]
Abstract
Under the background of global species extinction, the impact of epidemic diseases on wild animal protection is increasingly prominent. Here, we review and synthesize the literature on this topic, and discuss the relationship between diseases and biodiversity. Diseases usually reduce species diversity by decreasing or extinction of species populations, but also accelerate species evolution and promote species diversity. At the same time, species diversity can regulate disease outbreaks through dilution or amplification effects. The synergistic effect of human activities and global change is emphasized, which further aggravates the complex relationship between biodiversity and diseases. Finally, we emphasize the importance of active surveillance of wild animal diseases, which can protect wild animals from potential diseases, maintain population size and genetic variation, and reduce the damage of diseases to the balance of the whole ecosystem and human health. Therefore, we suggest that a background survey of wild animal populations and their pathogens should be carried out to assess the impact of potential outbreaks on the population or species level. The mechanism of dilution and amplification effect between species diversity and diseases of wild animals should be further studied to provide a theoretical basis and technical support for human intervention measures to change biodiversity. Most importantly, we should closely combine the protection of wild animals with the establishment of an active surveillance, prevention, and control system for wild animal epidemics, in an effort to achieve a win-win situation between wild animal protection and disease control.
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Affiliation(s)
- Bin Hu
- National Research Center for Wildlife-Borne Diseases, Institute of Zoology, Chinese Academy of Sciences, Beijing, China
- College of Life Sciences, University of Chinese Academy of Sciences, Beijing, China
| | - Shuyi Han
- National Research Center for Wildlife-Borne Diseases, Institute of Zoology, Chinese Academy of Sciences, Beijing, China
- College of Life Sciences, University of Chinese Academy of Sciences, Beijing, China
| | - Hongxuan He
- National Research Center for Wildlife-Borne Diseases, Institute of Zoology, Chinese Academy of Sciences, Beijing, China
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16
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Yin S, Li N, Xu W, Becker DJ, de Boer WF, Xu C, Mundkur T, Fountain-Jones NM, Li C, Han GZ, Wu Q, Prosser DJ, Cui L, Huang ZYX. Functional traits explain waterbirds' host status, subtype richness, and community-level infection risk for avian influenza. Ecol Lett 2023; 26:1780-1791. [PMID: 37586885 DOI: 10.1111/ele.14294] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2023] [Accepted: 07/17/2023] [Indexed: 08/18/2023]
Abstract
Species functional traits can influence pathogen transmission processes, and consequently affect species' host status, pathogen diversity, and community-level infection risk. We here investigated, for 143 European waterbird species, effects of functional traits on host status and pathogen diversity (subtype richness) for avian influenza virus at species level. We then explored the association between functional diversity and HPAI H5Nx occurrence at the community level for 2016/17 and 2021/22 epidemics in Europe. We found that both host status and subtype richness were shaped by several traits, such as diet guild and dispersal ability, and that the community-weighted means of these traits were also correlated with community-level risk of H5Nx occurrence. Moreover, functional divergence was negatively associated with H5Nx occurrence, indicating that functional diversity can reduce infection risk. Our findings highlight the value of integrating trait-based ecology into the framework of diversity-disease relationship, and provide new insights for HPAI prediction and prevention.
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Affiliation(s)
- Shenglai Yin
- College of Life Sciences, Nanjing Normal University, Nanjing, China
| | - Ning Li
- Institute of Applied Ecology, Nanjing Xiaozhuang University, Nanjing, China
| | - Wenjie Xu
- College of Life Sciences, Nanjing Normal University, Nanjing, China
| | - Daniel J Becker
- Department of Biology, University of Oklahoma, Norman, Oklahoma, USA
| | - Willem F de Boer
- Wildlife Ecology and Conservation Group, Wageningen University, Wageningen, The Netherlands
| | - Chi Xu
- School of Life Sciences, Nanjing University, Nanjing, China
| | - Taej Mundkur
- Wetlands International, Ede, The Netherlands
- Good Earth Environmental, Arnhem, The Netherlands
| | | | - Chunlin Li
- School of Resources and Environmental Engineering, Anhui University, Hefei, China
| | - Guan-Zhu Han
- College of Life Sciences, Nanjing Normal University, Nanjing, China
| | - Qiang Wu
- College of Life Sciences, Zhejiang University, Hangzhou, China
| | - Diann J Prosser
- Eastern Ecological Science Center, United States Geological Survey, Laurel, Maryland, USA
| | - Lijuan Cui
- Research Institute of Forestry, Chinese Academy of Forestry, Beijing, China
| | - Zheng Y X Huang
- College of Life Sciences, Nanjing Normal University, Nanjing, China
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17
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Brian JI. Parasites in biodiversity conservation: friend or foe? Trends Parasitol 2023; 39:618-621. [PMID: 37331884 DOI: 10.1016/j.pt.2023.05.005] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/14/2023] [Revised: 05/19/2023] [Accepted: 05/19/2023] [Indexed: 06/20/2023]
Abstract
Parasites stabilise food webs and facilitate species coexistence but can also lead to population- or species-level extinctions. So, in biodiversity conservation, are parasites friends or foes? This question is misleading: it implies that parasites are not part of biodiversity. Greater integration of parasites into global biodiversity and ecosystem conservation efforts is required.
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Affiliation(s)
- Joshua I Brian
- Department of Geography, King's College London, London WC2B 4BG, UK.
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18
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Marie V, Gordon ML. The (Re-)Emergence and Spread of Viral Zoonotic Disease: A Perfect Storm of Human Ingenuity and Stupidity. Viruses 2023; 15:1638. [PMID: 37631981 PMCID: PMC10458268 DOI: 10.3390/v15081638] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/23/2023] [Revised: 07/22/2023] [Accepted: 07/25/2023] [Indexed: 08/27/2023] Open
Abstract
Diseases that are transmitted from vertebrate animals to humans are referred to as zoonotic diseases. Although microbial agents such as bacteria and parasites are linked to zoonotic events, viruses account for a high percentage of zoonotic diseases that have emerged. Worryingly, the 21st century has seen a drastic increase in the emergence and re-emergence of viral zoonotic disease. Even though humans and animals have coexisted for millennia, anthropogenic factors have severely increased interactions between the two populations, thereby increasing the risk of disease spill-over. While drivers such as climate shifts, land exploitation and wildlife trade can directly affect the (re-)emergence of viral zoonotic disease, globalisation, geopolitics and social perceptions can directly facilitate the spread of these (re-)emerging diseases. This opinion paper discusses the "intelligent" nature of viruses and their exploitation of the anthropogenic factors driving the (re-)emergence and spread of viral zoonotic disease in a modernised and connected world.
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Affiliation(s)
- Veronna Marie
- Microbiology Laboratory, Department of Analytical Services, Rand Water, Vereeniging 1939, South Africa
| | - Michelle L. Gordon
- School of Laboratory Medicine and Medical Sciences, College of Health Sciences, University of KwaZulu-Natal, Durban 4001, South Africa;
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19
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Abstract
Plant diseases are strongly influenced by host biodiversity, spatial structure, and abiotic conditions. All of these are undergoing rapid change, as the climate is warming, habitats are being lost, and nitrogen deposition is changing nutrient dynamics of ecosystems with ensuing consequences for biodiversity. Here, I review examples of plant-pathogen associations to demonstrate how our ability to understand, model and predict disease dynamics is becoming increasingly difficult, as both plant and pathogen populations and communities are undergoing extensive change. The extent of this change is influenced via both direct and combined effects of global change drivers, and especially the latter are still poorly understood. Change at one trophic level is expected to drive change also at the other, and hence feedback loops between plants and their pathogens are expected to drive changes in disease risk both through ecological as well as evolutionary mechanisms. Many of the examples discussed here demonstrate an increase in disease risk as a result of ongoing change, suggesting that unless we successfully mitigate global environmental change, plant disease is going to become an increasingly heavy burden on our societies with far-reaching consequences for food security and functioning of ecosystems.
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Affiliation(s)
- Anna-Liisa Laine
- Department of Evolutionary Biology and Environmental Studies, University of Zürich, 8057 Zürich, Switzerland; Research Centre for Ecological Change, Organismal and Evolutionary Biology Research Programme, Faculty of Biological and Environmental Sciences, PO BOX 65 00014, University of Helsinki, Helsinki, Finland.
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20
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Romero-Alvarez D, Escobar LE, Auguste AJ, Del Valle SY, Manore CA. Transmission risk of Oropouche fever across the Americas. Infect Dis Poverty 2023; 12:47. [PMID: 37149619 PMCID: PMC10163756 DOI: 10.1186/s40249-023-01091-2] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2022] [Accepted: 04/04/2023] [Indexed: 05/08/2023] Open
Abstract
BACKGROUND Vector-borne diseases (VBDs) are important contributors to the global burden of infectious diseases due to their epidemic potential, which can result in significant population and economic impacts. Oropouche fever, caused by Oropouche virus (OROV), is an understudied zoonotic VBD febrile illness reported in Central and South America. The epidemic potential and areas of likely OROV spread remain unexplored, limiting capacities to improve epidemiological surveillance. METHODS To better understand the capacity for spread of OROV, we developed spatial epidemiology models using human outbreaks as OROV transmission-locality data, coupled with high-resolution satellite-derived vegetation phenology. Data were integrated using hypervolume modeling to infer likely areas of OROV transmission and emergence across the Americas. RESULTS Models based on one-support vector machine hypervolumes consistently predicted risk areas for OROV transmission across the tropics of Latin America despite the inclusion of different parameters such as different study areas and environmental predictors. Models estimate that up to 5 million people are at risk of exposure to OROV. Nevertheless, the limited epidemiological data available generates uncertainty in projections. For example, some outbreaks have occurred under climatic conditions outside those where most transmission events occur. The distribution models also revealed that landscape variation, expressed as vegetation loss, is linked to OROV outbreaks. CONCLUSIONS Hotspots of OROV transmission risk were detected along the tropics of South America. Vegetation loss might be a driver of Oropouche fever emergence. Modeling based on hypervolumes in spatial epidemiology might be considered an exploratory tool for analyzing data-limited emerging infectious diseases for which little understanding exists on their sylvatic cycles. OROV transmission risk maps can be used to improve surveillance, investigate OROV ecology and epidemiology, and inform early detection.
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Affiliation(s)
- Daniel Romero-Alvarez
- Biodiversity Institute and Department of Ecology & Evolutionary Biology, University of Kansas, Lawrence, KS, 66044, USA.
- Information Systems and Modeling (A-1), Los Alamos National Laboratory, Los Alamos, NM, USA.
- OneHealth Research Group, Facultad de Medicina, Universidad de las Américas, Quito, Ecuador.
| | - Luis E Escobar
- Department of Fish and Wildlife Conservation, Virginia Tech, Blacksburg, VA, 24061, USA
- Center for Emerging, Zoonotic, and Arthropod-Borne Pathogens, Virginia Tech, Blacksburg, VA, 24061, USA
| | - Albert J Auguste
- Center for Emerging, Zoonotic, and Arthropod-Borne Pathogens, Virginia Tech, Blacksburg, VA, 24061, USA
- Department of Entomology, Fralin Life Science Institute, College of Agriculture and Life Sciences, Virginia Tech, Blacksburg, VA, 24061, USA
| | - Sara Y Del Valle
- Information Systems and Modeling (A-1), Los Alamos National Laboratory, Los Alamos, NM, USA
| | - Carrie A Manore
- Theoretical Biology and Biophysics (T-6), Los Alamos National Laboratory, Los Alamos, NM, USA
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21
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Hanthanan Arachchilage K, Hussaini MY, Cogan NG, Cortez MH. Exploring how ecological and epidemiological processes shape multi-host disease dynamics using global sensitivity analysis. J Math Biol 2023; 86:83. [PMID: 37154947 DOI: 10.1007/s00285-023-01912-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/12/2022] [Revised: 12/24/2022] [Accepted: 03/31/2023] [Indexed: 05/10/2023]
Abstract
We use global sensitivity analysis (specifically, Partial Rank Correlation Coefficients) to explore the roles of ecological and epidemiological processes in shaping the temporal dynamics of a parameterized SIR-type model of two host species and an environmentally transmitted pathogen. We compute the sensitivities of disease prevalence in each host species to model parameters. Sensitivity rankings are calculated, interpreted biologically, and contrasted for cases where the pathogen is introduced into a disease-free community and cases where a second host species is introduced into an endemic single-host community. In some cases the magnitudes and dynamics of the sensitivities can be predicted only by knowing the host species' characteristics (i.e., their competitive abilities and disease competence) whereas in other cases they can be predicted by factors independent of the species' characteristics (specifically, intraspecific versus interspecific processes or a species' roles of invader versus resident). For example, when a pathogen is initially introduced into a disease-free community, disease prevalence in both hosts is more sensitive to the burst size of the first host than the second host. In comparison, disease prevalence in each host is more sensitive to its own infection rate than the infection rate of the other host species. In total, this study illustrates that global sensitivity analysis can provide useful insight into how ecological and epidemiological processes shape disease dynamics and how those effects vary across time and system conditions. Our results show that sensitivity analysis can provide quantification and direction when exploring biological hypotheses.
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Affiliation(s)
| | - Mohammed Y Hussaini
- Department of Mathematics, Florida State University, Tallahassee, Fl, 32306, USA
| | - N G Cogan
- Department of Mathematics, Florida State University, Tallahassee, Fl, 32306, USA
| | - Michael H Cortez
- Department of Biological Science, Florida State University, Tallahassee, Fl, 32306, USA.
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22
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Norberg A, Susi H, Sallinen S, Baran P, Clark NJ, Laine AL. Direct and indirect viral associations predict coexistence in wild plant virus communities. Curr Biol 2023; 33:1665-1676.e4. [PMID: 37019108 DOI: 10.1016/j.cub.2023.03.022] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2022] [Revised: 01/17/2023] [Accepted: 03/08/2023] [Indexed: 04/07/2023]
Abstract
Viruses are a vastly underestimated component of biodiversity that occur as diverse communities across hierarchical scales from the landscape level to individual hosts. The integration of community ecology with disease biology is a powerful, novel approach that can yield unprecedented insights into the abiotic and biotic drivers of pathogen community assembly. Here, we sampled wild plant populations to characterize and analyze the diversity and co-occurrence structure of within-host virus communities and their predictors. Our results show that these virus communities are characterized by diverse, non-random coinfections. Using a novel graphical network modeling framework, we demonstrate how environmental heterogeneity influences the network of virus taxa and how the virus co-occurrence patterns can be attributed to non-random, direct statistical virus-virus associations. Moreover, we show that environmental heterogeneity changed virus association networks, especially through their indirect effects. Our results highlight a previously underestimated mechanism of how environmental variability can influence disease risks by changing associations between viruses that are conditional on their environment.
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Affiliation(s)
- Anna Norberg
- Department of Evolutionary Biology and Environmental Studies, University of Zürich, 8057 Zürich, Switzerland; Centre for Biodiversity Dynamics, Department of Biology, Norwegian University of Science and Technology, 7034 Trondheim, Norway.
| | - Hanna Susi
- Organismal and Evolutionary Biology Research Programme, Faculty of Biological and Environmental Sciences, University of Helsinki, PO Box 65 00014, Helsinki, Finland
| | - Suvi Sallinen
- Organismal and Evolutionary Biology Research Programme, Faculty of Biological and Environmental Sciences, University of Helsinki, PO Box 65 00014, Helsinki, Finland
| | - Pezhman Baran
- Organismal and Evolutionary Biology Research Programme, Faculty of Biological and Environmental Sciences, University of Helsinki, PO Box 65 00014, Helsinki, Finland
| | - Nicholas J Clark
- School of Veterinary Science, Faculty of Science, University of Queensland, Gatton, QL 4343, Australia
| | - Anna-Liisa Laine
- Department of Evolutionary Biology and Environmental Studies, University of Zürich, 8057 Zürich, Switzerland; Organismal and Evolutionary Biology Research Programme, Faculty of Biological and Environmental Sciences, University of Helsinki, PO Box 65 00014, Helsinki, Finland
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23
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Halliday FW, Czyżewski S, Laine AL. Intraspecific trait variation and changing life-history strategies explain host community disease risk along a temperature gradient. Philos Trans R Soc Lond B Biol Sci 2023; 378:20220019. [PMID: 36744568 PMCID: PMC9900715 DOI: 10.1098/rstb.2022.0019] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023] Open
Abstract
Predicting how climate change will affect disease risk is complicated by the fact that changing environmental conditions can affect disease through direct and indirect effects. Species with fast-paced life-history strategies often amplify disease, and changing climate can modify life-history composition of communities thereby altering disease risk. However, individuals within a species can also respond to changing conditions with intraspecific trait variation. To test the effect of temperature, as well as inter- and intraspecifc trait variation on community disease risk, we measured foliar disease and specific leaf area (SLA; a proxy for life-history strategy) on more than 2500 host (plant) individuals in 199 communities across a 1101 m elevational gradient in southeastern Switzerland. There was no direct effect of increasing temperature on disease. Instead, increasing temperature favoured species with higher SLA, fast-paced life-history strategies. This effect was balanced by intraspecific variation in SLA: on average, host individuals expressed lower SLA with increasing temperature, and this effect was stronger among species adapted to warmer temperatures and lower latitudes. These results demonstrate how impacts of changing temperature on disease may depend on how temperature combines and interacts with host community structure while indicating that evolutionary constraints can determine how these effects are manifested under global change. This article is part of the theme issue 'Infectious disease ecology and evolution in a changing world'.
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Affiliation(s)
- Fletcher W. Halliday
- Department of Evolutionary Biology and Environmental Studies, University of Zurich, 8057 Zurich, Switzerland
| | - Szymon Czyżewski
- Department of Evolutionary Biology and Environmental Studies, University of Zurich, 8057 Zurich, Switzerland
| | - Anna-Liisa Laine
- Department of Evolutionary Biology and Environmental Studies, University of Zurich, 8057 Zurich, Switzerland,Research Centre for Ecological Change, Organismal & Evolutionary Biology Research Programme, Faculty of Biological and Environmental Sciences, University of Helsinki, PO Box 65, Helsinki FI-00014, Finland
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Heckley AM, Becker DJ. Tropical bat ectoparasitism in continuous versus fragmented forests: A gap analysis and preliminary meta-analysis. Ecol Evol 2023; 13:e9784. [PMID: 36744075 PMCID: PMC9891993 DOI: 10.1002/ece3.9784] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/08/2022] [Revised: 01/06/2023] [Accepted: 01/16/2023] [Indexed: 02/04/2023] Open
Abstract
Tropical regions are experiencing rapid rates of forest fragmentation, which can have several effects on wildlife, including altered parasite dynamics. Bats are a useful host group to consider the effects of fragmentation, because they are abundant in the tropics, serve important ecological roles, and harbor many parasites. Nevertheless, research on the effects of fragmentation on bat ectoparasites is still limited. To help guide ongoing and future research efforts, this study had two objectives: (1) conduct a gap analysis to characterize the state of currently available research on fragmentation effects on bat ectoparasites and (2) conduct a preliminary meta-analysis to identify current trends. We systematically highlighted several research gaps: Studies comparing the effects of fragmented versus continuous forests on ectoparasites are limited and have primarily been conducted in the Neotropics, with a focus on bats in the superfamily Noctilionidea (especially frugivorous phyllostomids). Our preliminary meta-analysis suggested that ectoparasite prevalence (but not the mean or variance in intensity) was higher in fragments than in continuous forests. Moreover, prevalence increased with increasing roost duration, and mean intensity was higher for bats with higher wing aspect ratios. Intensity variance was affected by an interaction between forest type and wing aspect ratio, such that variance increased for bats with high-wing aspect ratios in continuous forests but decreased in fragments. These results suggest that fragmentation can shape aspects of bat ectoparasitism and could have implications for the ecology, health, and conservation of bats in fragmented landscapes. However, existing research gaps could bias our current understanding of habitat change and bat health, and future research should thus investigate these effects in the Paleotropics and with other bat families.
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Affiliation(s)
- Alexis M. Heckley
- Department of Biology and the Redpath MuseumMcGill UniversityMontrealQuebecCanada
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Liu X, Xiao Y, Lin Z, Wang X, Hu K, Liu M, Zhao Y, Qi Y, Zhou S. Spatial scale-dependent dilution effects of biodiversity on plant diseases in grasslands. Ecology 2023; 104:e3944. [PMID: 36477908 DOI: 10.1002/ecy.3944] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 04/19/2022] [Revised: 11/03/2022] [Accepted: 11/07/2022] [Indexed: 12/12/2022]
Abstract
The rapid biodiversity losses of the Anthropocene have motivated ecologists to understand how biodiversity affects infectious diseases. Spatial scale is thought to moderate negative biodiversity-disease relationships (i.e., dilution effects) in zoonotic diseases, whereas evidence from plant communities for an effect of scale remains limited, especially at local scales where the mechanisms (e.g., encounter reduction) underlying dilution effects actually work. Here, we tested how spatial scale affects the direction and magnitude of biodiversity-disease relationships. We utilized a 10-year-old nitrogen addition experiment in a Tibetan alpine meadow, with 0, 5, 10, and 15 g/m2 nitrogen addition treatments. Within the treatment plots, we arranged a total of 216 quadrats (of either 0.125 × 0.125 m, 0.25 × 0.25 m or 0.5 × 0.5 m size) to test how the sample area affects the relationship between plant species richness and foliar fungal disease severity. We found that the dilution effects were stronger in the 0.125 × 0.125 m and 0.25 × 0.25 m quadrats, compared with 0.5 × 0.5 m quadrats. There was a significant interaction between species richness and nitrogen addition in the 0.125 × 0.125 m and 0.25 × 0.25 m quadrats, indicating that a dilution effect was more easily observed under higher levels of nitrogen addition. Based on multigroup structural equation models, we found that even accounting for the direct impact of nitrogen addition (i.e., "nitrogen-disease hypothesis"), the dilution effect still worked at the 0.125 × 0.125 m scale. Overall, these findings suggest that spatial scale directly determines the occurrence of dilution effects, and can partly explain the observed variation in biodiversity-disease relationships in grasslands. Next-generation frameworks for predicting infectious diseases under rapid biodiversity loss scenarios need to incorporate spatial information.
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Affiliation(s)
- Xiang Liu
- State Key Laboratory of Herbage Improvement and Grassland Agro-Ecosystems, College of Ecology, Lanzhou University, Lanzhou, China
| | - Yao Xiao
- State Key Laboratory of Herbage Improvement and Grassland Agro-Ecosystems, College of Ecology, Lanzhou University, Lanzhou, China
| | - Ziyuan Lin
- State Key Laboratory of Herbage Improvement and Grassland Agro-Ecosystems, College of Ecology, Lanzhou University, Lanzhou, China
| | - Xingxing Wang
- State Key Laboratory of Herbage Improvement and Grassland Agro-Ecosystems, College of Ecology, Lanzhou University, Lanzhou, China
| | - Kui Hu
- State Key Laboratory of Herbage Improvement and Grassland Agro-Ecosystems, College of Ecology, Lanzhou University, Lanzhou, China
| | - Mu Liu
- State Key Laboratory of Herbage Improvement and Grassland Agro-Ecosystems, College of Ecology, Lanzhou University, Lanzhou, China
| | - Yimin Zhao
- Key Laboratory of Genetics and Germplasm Innovation of Tropical Special Forest Trees and Ornamental Plants, Ministry of Education, College of Forestry, Hainan University, Haikou, China
| | - Yanwen Qi
- Key Laboratory of Genetics and Germplasm Innovation of Tropical Special Forest Trees and Ornamental Plants, Ministry of Education, College of Forestry, Hainan University, Haikou, China
| | - Shurong Zhou
- Key Laboratory of Genetics and Germplasm Innovation of Tropical Special Forest Trees and Ornamental Plants, Ministry of Education, College of Forestry, Hainan University, Haikou, China
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Wang XY, Gao S, Chen T, Wang J, Yu FH. Interactions between soil microbes and native species drive a diversity-invasibility relationship. Biol Invasions 2022. [DOI: 10.1007/s10530-022-02988-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
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Chen S, Liu X, He Q, Zhou S. Higher-order interactions on disease transmission can reverse the dilution effect or weaken the amplification effect to unimodal pattern. Ecol Modell 2022. [DOI: 10.1016/j.ecolmodel.2022.110156] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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Liu X, Lu Y, Huang M, Zhou S. Host diversity positively affects the temporal stability of foliar fungal diseases in a Tibetan alpine meadow. ANNALS OF BOTANY 2022; 130:525-534. [PMID: 35809261 PMCID: PMC9510944 DOI: 10.1093/aob/mcac093] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/07/2022] [Accepted: 07/07/2022] [Indexed: 06/15/2023]
Abstract
BACKGROUND AND AIMS Plant disease can dramatically affect population dynamics, community composition and ecosystem functions. However, most empirical studies focus on diseases at a certain time point and largely ignore their temporal stability, which directly affects our ability to predict when and where disease outbreaks will occur. METHODS Using a removal experiment that manipulates plant diversity (i.e. a plant biodiversity and ecosystem function experiment) and a fertilization experiment in a Tibetan alpine meadow, we investigated how different plant biodiversity indices and nitrogen fertilization affect the temporal stability of foliar fungal diseases (measured as the mean value of community pathogen load divided by its standard deviation) over seven consecutive years. KEY RESULTS We found that the temporal stability of foliar fungal diseases increased with plant diversity indices in the plant biodiversity and ecosystem function experiment. Meanwhile, we observed a weakly positive relationship between host diversity and temporal stability in the fertilization experiment. However, the nitrogen treatment did not affect temporal stability, given that fertilization increased both the mean and standard deviation of pathogen load by roughly the same magnitude. CONCLUSIONS We conclude that host diversity regulates the temporal stability of pathogen load, but we note that this effect may be attenuated under rapid biodiversity loss in the Anthropocene.
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Affiliation(s)
- Xiang Liu
- Key Laboratory of Genetics and Germplasm Innovation of Tropical Special Forest Trees and Ornamental Plants, Ministry of Education, College of Forestry, Hainan University, Haikou, PR China
- State Key Laboratory of Grassland Agro-Ecosystems, College of Ecology, Lanzhou University, Lanzhou, PR China
| | - Yawen Lu
- Ministry of Education Key Laboratory for Biodiversity Science and Ecological Engineering, School of Life Sciences, Fudan University, Shanghai, PR China
| | - Mengjiao Huang
- Ministry of Education Key Laboratory for Biodiversity Science and Ecological Engineering, School of Life Sciences, Fudan University, Shanghai, PR China
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Chen L, Chen S, Kong P, Zhou L. Host competence, interspecific competition and vector preference interact to determine the vector-borne infection ecology. Front Ecol Evol 2022. [DOI: 10.3389/fevo.2022.993844] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
Understanding how ecological interactions affect vector-borne disease dynamics is crucial in the context of rapid biodiversity loss and increased emerging vector-borne diseases. Although there have been many studies on the impact of interspecific competition and host competence on disease dynamics, few of them have addressed the case of a vector-borne disease. Using a simple compartment model with two competing host species and one vector, we investigated the combined effects of vector preference, host competence, and interspecific competition on disease risk in a vector-borne system. Our research demonstrated that disease transmission dynamics in multi-host communities are more complex than anticipated. Vector preference and differences in host competence shifted the direction of the effect of competition on community disease risk, yet interspecific competition quantitatively but not qualitatively changed the effect of vector preference on disease risk. Our work also identified the conditions of the dilution effect and amplification effect in frequency-dependent transmission mode, and we discovered that adding vector preference and interspecific competition into a simple two-host-one-vector model altered the outcomes of how increasing species richness affects disease risk. Our work explains some of the variation in outcomes in previous empirical and theoretical studies on the dilution effect.
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Infante J, Riquelme M, Huerta N, Oettinger S, Fredes F, Simonetti JA, Rubio AV. Cryptosporidium spp. and Giardia spp. in wild rodents: using occupancy models to estimate drivers of occurrence and prevalence in native forest and exotic Pinus radiata plantations from Central Chile. Acta Trop 2022; 235:106635. [DOI: 10.1016/j.actatropica.2022.106635] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2022] [Revised: 08/02/2022] [Accepted: 08/04/2022] [Indexed: 11/26/2022]
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31
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Mipam TD, Chen F, Tian L, Zhang P, Huang M, Chen L, Wang X, Zhang P, Lin Z, Liu X. Plant community-mediated effects of grazing on plant diseases. Oecologia 2022; 199:897-905. [PMID: 35907123 DOI: 10.1007/s00442-022-05223-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2021] [Accepted: 07/17/2022] [Indexed: 11/29/2022]
Abstract
Grazing is one of the most important management practices for grasslands. To date, most studies on how grazing affects plant diseases have focused on a single plant species, ignoring plant community characteristics and phylogeny. We used data from a 6-year yak grazing experiment (0, 1, 2, and 3 yak(s) ha - 1 treatment) in an alpine meadow ecosystem of Qinghai-Tibetan Plateau, from which we tested grazing effects on foliar fungal diseases at both population and community levels. By measuring plant community variables (including richness, evenness, phylogenetic diversity, and composition) and disease severity, we evaluated the relative importance of plant community-mediated effects of yak grazing on community pathogen load with a multi-model inference approach. We found significant differences in pathogen load among different grazing treatments; we recorded the highest and lowest pathogen loads in the 1 yak ha - 1 treatment and in the 3 yaks ha - 1 treatment, respectively. Pielou's evenness index and community proneness (i.e., an estimate of the capacity of plant communities to support diseases) best explained variation in pathogen load, indicating that plant community-mediated effects (through evenness and proneness) of yak grazing determined pathogen load. Our study provides empirical evidence that grazing influences foliar fungal disease prevalence through plant community evenness and composition, which demonstrates the necessity of incorporating host plant community characteristics into disease load prediction frameworks.
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Affiliation(s)
- Tserang Donko Mipam
- Sichuan Zoige Alpine Wetland Ecosystem National Observation and Research Station, Institute of Qinghai-Tibetan Plateau, Southwest Minzu University, Chengdu, 610041, People's Republic of China
| | - Fei Chen
- State Key Laboratory of Grassland Agro-Ecosystems & College of Ecology, Lanzhou University, Lanzhou, 730000, People's Republic of China
| | - Liming Tian
- Sichuan Zoige Alpine Wetland Ecosystem National Observation and Research Station, Key Laboratory for Bio-Resource and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu, 610065, People's Republic of China
| | - Pei Zhang
- Sichuan Zoige Alpine Wetland Ecosystem National Observation and Research Station, Key Laboratory for Bio-Resource and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu, 610065, People's Republic of China
| | - Mengjiao Huang
- Ministry of Education Key Laboratory for Biodiversity Science and Ecological Engineering, School of Life Sciences, Fudan University, 2005 Songhu Road, Shanghai, 200438, People's Republic of China
| | - Lifan Chen
- School of Arts and Sciences, Shanghai University of Medicine and Health Sciences, Shanghai, 201318, People's Republic of China
| | - Xingxing Wang
- State Key Laboratory of Grassland Agro-Ecosystems & College of Ecology, Lanzhou University, Lanzhou, 730000, People's Republic of China
| | - Peng Zhang
- State Key Laboratory of Grassland Agro-Ecosystems & College of Ecology, Lanzhou University, Lanzhou, 730000, People's Republic of China
| | - Ziyuan Lin
- State Key Laboratory of Grassland Agro-Ecosystems & College of Ecology, Lanzhou University, Lanzhou, 730000, People's Republic of China
| | - Xiang Liu
- State Key Laboratory of Grassland Agro-Ecosystems & College of Ecology, Lanzhou University, Lanzhou, 730000, People's Republic of China.
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Cappelli SL, Domeignoz-Horta LA, Loaiza V, Laine AL. Plant biodiversity promotes sustainable agriculture directly and via belowground effects. TRENDS IN PLANT SCIENCE 2022; 27:674-687. [PMID: 35279365 DOI: 10.1016/j.tplants.2022.02.003] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/05/2021] [Revised: 02/10/2022] [Accepted: 02/16/2022] [Indexed: 06/14/2023]
Abstract
While the positive relationship between plant biodiversity and ecosystem functioning (BEF) is well established, the extent to which this is mediated via belowground microbial processes is poorly understood. Growing evidence suggests that plant community structure influences soil microbial diversity, which in turn promotes functions desired for sustainable agriculture. Here, we outline the 'plant-directed' and soil microbe-mediated mechanisms expected to promote positive BEF. We identify how this knowledge can be utilized in plant diversification schemes to maximize ecosystem functioning in agroecosystems, which are typically species poor and sensitive to biotic and abiotic stressors. In the face of resource overexploitation and global change, bridging the gaps between biodiversity science and agricultural practices is crucial to meet food security in the Anthropocene.
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Affiliation(s)
- Seraina L Cappelli
- Research Centre for Ecological Change, Organismal and Evolutionary Biology Research Programme, Faculty of Biological and Environmental Sciences, University of Helsinki, Helsinki, Finland.
| | - Luiz A Domeignoz-Horta
- Department of Evolutionary Biology and Environmental Sciences, University of Zürich, Zürich, Switzerland
| | - Viviana Loaiza
- Department of Evolutionary Biology and Environmental Sciences, University of Zürich, Zürich, Switzerland
| | - Anna-Liisa Laine
- Research Centre for Ecological Change, Organismal and Evolutionary Biology Research Programme, Faculty of Biological and Environmental Sciences, University of Helsinki, Helsinki, Finland; Department of Evolutionary Biology and Environmental Sciences, University of Zürich, Zürich, Switzerland
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Vinson JE, Gottdenker NL, Chaves LF, Kaul RB, Kramer AM, Drake JM, Hall RJ. Land reversion and zoonotic spillover risk. ROYAL SOCIETY OPEN SCIENCE 2022; 9:220582. [PMID: 35706674 PMCID: PMC9174719 DOI: 10.1098/rsos.220582] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/02/2022] [Accepted: 05/11/2022] [Indexed: 05/03/2023]
Abstract
Deforestation alters wildlife communities and modifies human-wildlife interactions, often increasing zoonotic spillover potential. When deforested land reverts to forest, species composition differences between primary and regenerating (secondary) forest could alter spillover risk trajectory. We develop a mathematical model of land-use change, where habitats differ in their relative spillover risk, to understand how land reversion influences spillover risk. We apply this framework to scenarios where spillover risk is higher in deforested land than mature forest, reflecting higher relative abundance of highly competent species and/or increased human-wildlife encounters, and where regenerating forest has either very low or high spillover risk. We find the forest regeneration rate, the spillover risk of regenerating forest relative to deforested land, and how rapidly regenerating forest regains attributes of mature forest determine landscape-level spillover risk. When regenerating forest has a much lower spillover risk than deforested land, reversion lowers cumulative spillover risk, but instaneous spillover risk peaks earlier. However, when spillover risk is high in regenerating and cleared habitats, landscape-level spillover risk remains high, especially when cleared land is rapidly abandoned then slowly regenerates to mature forest. These results suggest that proactive wildlife management and awareness of human exposure risk in regenerating forests could be important tools for spillover mitigation.
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Affiliation(s)
- John E. Vinson
- Odum School of Ecology, University of Georgia, Athens, GA 30602, USA
- Center for the Ecology of Infectious Diseases, University of Georgia, Athens, GA 30602, USA
| | - Nicole L. Gottdenker
- Center for the Ecology of Infectious Diseases, University of Georgia, Athens, GA 30602, USA
- Department of Veterinary Pathology, College of Veterinary Medicine, University of Georgia, Athens, GA 30602, USA
| | - Luis Fernando Chaves
- Instituto Conmemorativo Gorgas de Estudios de la Salud, Apartado Postal 0816-15 02593, Panamá, República de Panamá
| | - RajReni B. Kaul
- Odum School of Ecology, University of Georgia, Athens, GA 30602, USA
- Center for the Ecology of Infectious Diseases, University of Georgia, Athens, GA 30602, USA
| | - Andrew M. Kramer
- Center for the Ecology of Infectious Diseases, University of Georgia, Athens, GA 30602, USA
- Department of Integrative Biology, University of South Florida, Tampa, FL 33620, USA
| | - John M. Drake
- Odum School of Ecology, University of Georgia, Athens, GA 30602, USA
- Center for the Ecology of Infectious Diseases, University of Georgia, Athens, GA 30602, USA
| | - Richard J. Hall
- Odum School of Ecology, University of Georgia, Athens, GA 30602, USA
- Center for the Ecology of Infectious Diseases, University of Georgia, Athens, GA 30602, USA
- Department of Infectious Diseases, College of Veterinary Medicine, University of Georgia, Athens, GA 30602, USA
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Bourdin A, Bord S, Durand J, Galon C, Moutailler S, Scherer-Lorenzen M, Jactel H. Forest Diversity Reduces the Prevalence of Pathogens Transmitted by the Tick Ixodes ricinus. Front Ecol Evol 2022. [DOI: 10.3389/fevo.2022.891908] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
Tick-borne diseases represent the majority of vector-borne human diseases in Europe, with Ixodes ricinus, mostly present in forests, as the main vector. Studies show that vertebrate hosts diversification would decrease the prevalence of these pathogens. However, it is not well known whether habitat diversity can have similar impact on ticks and their infection rates. We measured the presence and abundance of different stages of I. ricinus, and the prevalence of associated pathogens in a large-scale forest experiment in which we manipulated tree diversity and moisture level. We showed that larval abundance was influenced by tree species identity, with larvae being more present in pine plots than in oak plots, while nymph abundance increased with canopy tree density. The proportion of Borrelia burgdorferi s.l.-infected nymphs decreased with increasing tree diversity. Our findings suggest that tree overstorey composition, structure and diversity, can affect tick abundance and pathogen prevalence. They support the idea that forest habitats may have “diluting” or “amplifying” effects on tick-borne diseases with direct relevance for human health.
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Biological invasions facilitate zoonotic disease emergences. Nat Commun 2022; 13:1762. [PMID: 35365665 PMCID: PMC8975888 DOI: 10.1038/s41467-022-29378-2] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/23/2021] [Accepted: 03/14/2022] [Indexed: 12/27/2022] Open
Abstract
Outbreaks of zoonotic diseases are accelerating at an unprecedented rate in the current era of globalization, with substantial impacts on the global economy, public health, and sustainability. Alien species invasions have been hypothesized to be important to zoonotic diseases by introducing both existing and novel pathogens to invaded ranges. However, few studies have evaluated the generality of alien species facilitating zoonoses across multiple host and parasite taxa worldwide. Here, we simultaneously quantify the role of 795 established alien hosts on the 10,473 zoonosis events across the globe since the 14th century. We observe an average of ~5.9 zoonoses per alien zoonotic host. After accounting for species-, disease-, and geographic-level sampling biases, spatial autocorrelation, and the lack of independence of zoonosis events, we find that the number of zoonosis events increase with the richness of alien zoonotic hosts, both across space and through time. We also detect positive associations between the number of zoonosis events per unit space and climate change, land-use change, biodiversity loss, human population density, and PubMed citations. These findings suggest that alien host introductions have likely contributed to zoonosis emergences throughout recent history and that minimizing future zoonotic host species introductions could have global health benefits. Alien species invasions are thought to be important to zoonotic diseases through the introduction of both existing and novel pathogens to invaded ranges. Using data from 795 established alien animals and 10,473 zoonosis events worldwide, this study examines the role of alien zoonotic hosts on zoonosis emergences after accounting for climate, propagule pressure, global change and sampling bias.
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36
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Shah HA, Carrasco LR, Hamlet A, Murray KA. Exploring agricultural land-use and childhood malaria associations in sub-Saharan Africa. Sci Rep 2022; 12:4124. [PMID: 35260722 PMCID: PMC8904834 DOI: 10.1038/s41598-022-07837-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/07/2021] [Accepted: 02/24/2022] [Indexed: 11/09/2022] Open
Abstract
Agriculture in Africa is rapidly expanding but with this comes potential disbenefits for the environment and human health. Here, we retrospectively assess whether childhood malaria in sub-Saharan Africa varies across differing agricultural land uses after controlling for socio-economic and environmental confounders. Using a multi-model inference hierarchical modelling framework, we found that rainfed cropland was associated with increased malaria in rural (OR 1.10, CI 1.03-1.18) but not urban areas, while irrigated or post flooding cropland was associated with malaria in urban (OR 1.09, CI 1.00-1.18) but not rural areas. In contrast, although malaria was associated with complete forest cover (OR 1.35, CI 1.24-1.47), the presence of natural vegetation in agricultural lands potentially reduces the odds of malaria depending on rural-urban context. In contrast, no associations with malaria were observed for natural vegetation interspersed with cropland (veg-dominant mosaic). Agricultural expansion through rainfed or irrigated cropland may increase childhood malaria in rural or urban contexts in sub-Saharan Africa but retaining some natural vegetation within croplands could help mitigate this risk and provide environmental co-benefits.
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Affiliation(s)
- Hiral Anil Shah
- MRC Centre for Global Infectious Disease Analysis, Department of Infectious Disease Epidemiology, School of Public Health, Imperial College London, London, UK. .,Grantham Institute - Climate Change and the Environment - Imperial College London, London, UK.
| | - Luis Roman Carrasco
- Department of Biological Sciences, National University of Singapore, Singapore, Singapore
| | - Arran Hamlet
- MRC Centre for Global Infectious Disease Analysis, Department of Infectious Disease Epidemiology, School of Public Health, Imperial College London, London, UK
| | - Kris A Murray
- MRC Centre for Global Infectious Disease Analysis, Department of Infectious Disease Epidemiology, School of Public Health, Imperial College London, London, UK.,MRC Unit The Gambia at London, School of Hygiene and Tropical Medicine, Atlantic Boulevard, Fajara, The Gambia.,Centre on Climate Change and Planetary Health, London School of Hygiene & Tropical Medicine, London, UK
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Gibson AK. Genetic diversity and disease: The past, present, and future of an old idea. Evolution 2022; 76:20-36. [PMID: 34796478 PMCID: PMC9064374 DOI: 10.1111/evo.14395] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2021] [Revised: 10/03/2021] [Accepted: 10/08/2021] [Indexed: 01/21/2023]
Abstract
Why do infectious diseases erupt in some host populations and not others? This question has spawned independent fields of research in evolution, ecology, public health, agriculture, and conservation. In the search for environmental and genetic factors that predict variation in parasitism, one hypothesis stands out for its generality and longevity: genetically homogeneous host populations are more likely to experience severe parasitism than genetically diverse populations. In this perspective piece, I draw on overlapping ideas from evolutionary biology, agriculture, and conservation to capture the far-reaching implications of the link between genetic diversity and disease. I first summarize the development of this hypothesis and the results of experimental tests. Given the convincing support for the protective effect of genetic diversity, I then address the following questions: (1) Where has this idea been put to use, in a basic and applied sense, and how can we better use genetic diversity to limit disease spread? (2) What new hypotheses does the established disease-diversity relationship compel us to test? I conclude that monitoring, preserving, and augmenting genetic diversity is one of our most promising evolutionarily informed strategies for buffering wild, domesticated, and human populations against future outbreaks.
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Affiliation(s)
- Amanda Kyle Gibson
- Department of Biology University of Virginia Charlottesville Virginia 22903
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Reaser JK, Hunt BE, Ruiz‐Aravena M, Tabor GM, Patz JA, Becker D, Locke H, Hudson PJ, Plowright RK. Fostering landscape immunity to protect human health: A science‐based rationale for shifting conservation policy paradigms. Conserv Lett 2022. [DOI: 10.1111/conl.12869] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022] Open
Affiliation(s)
- Jamie K. Reaser
- Center for Large Landscape Conservation Bozeman Montana USA
- Department of Environmental Science and Policy George Mason University Fairfax Virginia USA
| | - Brooklin E. Hunt
- Department of Microbiology and Cell Biology Montana State University Bozeman Montana USA
| | - Manuel Ruiz‐Aravena
- Department of Microbiology and Cell Biology Montana State University Bozeman Montana USA
| | - Gary M. Tabor
- Center for Large Landscape Conservation Bozeman Montana USA
| | - Jonathan A. Patz
- Global Health Institute, Nelson Institute, and the Department of Population Health Sciences University of Wisconsin‐Madison Madison Wisconsin USA
| | - Daniel Becker
- Department of Biology University of Oklahoma Norman Oklahoma USA
| | - Harvey Locke
- Beyond the Aichi Targets Task Force IUCN World Commission on Protected Areas, and Yellowstone to Yukon Conservation Initiative Banff Alberta Canada
| | - Peter J. Hudson
- Department of Biology Pennsylvania State University State College Pennsylvania USA
| | - Raina K. Plowright
- Department of Microbiology and Cell Biology Montana State University Bozeman Montana USA
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Kocher A, Cornuault J, Gantier JC, Manzi S, Chavy A, Girod R, Dusfour I, Forget PM, Ginouves M, Prévot G, Guégan JF, Bañuls AL, de Thoisy B, Murienne J. Biodiversity and vector-borne diseases: host dilution and vector amplification occur simultaneously for Amazonian leishmaniases. Mol Ecol 2022; 32:1817-1831. [PMID: 35000240 DOI: 10.1111/mec.16341] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/27/2021] [Revised: 12/02/2021] [Accepted: 12/23/2021] [Indexed: 11/29/2022]
Abstract
Changes in biodiversity may impact infectious disease transmission through multiple mechanisms. We explored the impact of biodiversity changes on the transmission of Amazonian leishmaniases, a group of wild zoonoses transmitted by phlebotomine sand flies (Psychodidae), which represent an important health burden in a region where biodiversity is both rich and threatened. Using molecular analyses of sand fly pools and blood-fed dipterans, we characterized the disease system in forest sites in French Guiana undergoing different levels of human-induced disturbance. We show that the prevalence of Leishmania parasites in sand flies correlates positively with the relative abundance of mammal species known as Leishmania reservoirs. In addition, Leishmania reservoirs tend to dominate in less diverse mammal communities, in accordance with the dilution effect hypothesis. This results in a negative relationship between Leishmania prevalence and mammal diversity. On the other hand, higher mammal diversity is associated with higher sand fly density, possibly because more diverse mammal communities harbor higher biomass and more abundant feeding resources for sand flies, although more research is needed to identify the factors that shape sand fly communities. As a consequence of these antagonistic effects, decreased mammal diversity comes with an increase of parasite prevalence in sand flies, but has no detectable impact on the density of infected sand flies. These results represent additional evidence that biodiversity changes may simultaneously dilute and amplify vector-borne disease transmission through different mechanisms that need to be better understood before drawing generalities on the biodiversity-disease relationship.
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Affiliation(s)
- Arthur Kocher
- Laboratoire Évolution et Diversité Biologique (UMR5174 EDB) - CNRS, IRD, Université Toulouse III Paul Sabatier - Toulouse, France.,MIVEGEC, Université de Montpellier, IRD, CNRS, Montpellier, France.,Institut Pasteur de la Guyane, Cayenne, France.,Transmission, Infection, Diversification & Evolution Group, Max-Planck Institute for the Science of Human History, Kahlaische Str. 10, 07745, Jena, Germany
| | - Josselin Cornuault
- Real Jardín Botánico CSIC, Plaza Murillo 2, 28014, Madrid, Spain.,ISEM, Université de Montpellier, CNRS, IRD, EPHE, Montpellier, France
| | - Jean-Charles Gantier
- Laboratoire des Identifications Fongiques et Entomo-parasitologiques, Mennecy, France
| | - Sophie Manzi
- Laboratoire Évolution et Diversité Biologique (UMR5174 EDB) - CNRS, IRD, Université Toulouse III Paul Sabatier - Toulouse, France
| | - Agathe Chavy
- Institut Pasteur de la Guyane, Cayenne, France.,TBIP, Université de Guyane, 97300, Cayenne, France
| | | | | | - Pierre-Michel Forget
- Muséum National d'Histoire Naturelle, UMR-7179 MECADEV (Mécanismes Adaptatifs et Evolution), MNHN-CNRS, Brunoy, France
| | - Marine Ginouves
- TBIP, Université de Guyane, 97300, Cayenne, France.,Université de Lille, CNRS, Inserm, Institut Pasteur de Lille, U1019-UMR9017-CIIL Centre d'Infection et d'Immunité de Lille, 59000, Lille, France
| | - Ghislaine Prévot
- TBIP, Université de Guyane, 97300, Cayenne, France.,Université de Lille, CNRS, Inserm, Institut Pasteur de Lille, U1019-UMR9017-CIIL Centre d'Infection et d'Immunité de Lille, 59000, Lille, France
| | - Jean-François Guégan
- MIVEGEC, Université de Montpellier, IRD, CNRS, Montpellier, France.,INRAE, Cirad, Université de Montpellier, UMR ASTRE, Montpellier, France
| | | | - Benoit de Thoisy
- Institut Pasteur de la Guyane, Cayenne, France.,Association Kwata, Cayenne, French Guiana
| | - Jérôme Murienne
- Laboratoire Évolution et Diversité Biologique (UMR5174 EDB) - CNRS, IRD, Université Toulouse III Paul Sabatier - Toulouse, France
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40
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Rosenthal LM, Brooks WR, Rizzo DM. Species densities, assembly order, and competence jointly determine the diversity–disease relationship. Ecology 2021; 103:e3622. [DOI: 10.1002/ecy.3622] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 09/01/2021] [Revised: 11/12/2021] [Accepted: 12/09/2021] [Indexed: 11/12/2022]
Affiliation(s)
- Lisa M. Rosenthal
- Department of Plant Pathology University of California Davis California USA
- Graduate Group in Ecology University of California Davis California USA
| | | | - David M. Rizzo
- Department of Plant Pathology University of California Davis California USA
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41
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De Baets K, Huntley JW, Scarponi D, Klompmaker AA, Skawina A. Phanerozoic parasitism and marine metazoan diversity: dilution versus amplification. Philos Trans R Soc Lond B Biol Sci 2021; 376:20200366. [PMID: 34538136 PMCID: PMC8450635 DOI: 10.1098/rstb.2020.0366] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023] Open
Abstract
Growing evidence suggests that biodiversity mediates parasite prevalence. We have compiled the first global database on occurrences and prevalence of marine parasitism throughout the Phanerozoic and assess the relationship with biodiversity to test if there is support for amplification or dilution of parasitism at the macroevolutionary scale. Median prevalence values by era are 5% for the Paleozoic, 4% for the Mesozoic, and a significant increase to 10% for the Cenozoic. We calculated period-level shareholder quorum sub-sampled (SQS) estimates of mean sampled diversity, three-timer (3T) origination rates, and 3T extinction rates for the most abundant host clades in the Paleobiology Database to compare to both occurrences of parasitism and the more informative parasite prevalence values. Generalized linear models (GLMs) of parasite occurrences and SQS diversity measures support both the amplification (all taxa pooled, crinoids and blastoids, and molluscs) and dilution hypotheses (arthropods, cnidarians, and bivalves). GLMs of prevalence and SQS diversity measures support the amplification hypothesis (all taxa pooled and molluscs). Though likely scale-dependent, parasitism has increased through the Phanerozoic and clear patterns primarily support the amplification of parasitism with biodiversity in the history of life. This article is part of the theme issue ‘Infectious disease macroecology: parasite diversity and dynamics across the globe’.
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Affiliation(s)
- Kenneth De Baets
- GeoZentrum Nordbayern, Fachgruppe PaläoUmwelt, Friedrich-Alexander-University Erlangen-Nürnberg, Loewenichstraße 28, 91054 Erlangen, Germany
| | - John Warren Huntley
- Department of Geological Sciences, University of Missouri, 101 Geological Sciences Building, Columbia, MO 65211, USA
| | - Daniele Scarponi
- Dipartimento di Scienze Biologiche, Geologiche e Ambientali, University of Bologna, Piazza di Porta San Donato 1, 40131 Bologna, Italy
| | - Adiël A Klompmaker
- Department of Museum Research and Collections and Alabama Museum of Natural History, University of Alabama, Box 870340, Tuscaloosa, AL 35487, USA
| | - Aleksandra Skawina
- Department of Animal Physiology, Faculty of Biology, University of Warsaw, Warszawa, Poland
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42
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Cohen H, Smith GP, Sardiñas H, Zorn JF, McFrederick QS, Woodard SH, Ponisio LC. Mass-flowering monoculture attracts bees, amplifying parasite prevalence. Proc Biol Sci 2021; 288:20211369. [PMID: 34641730 DOI: 10.1098/rspb.2021.1369] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022] Open
Abstract
As the global agricultural footprint expands, it is increasingly important to address the link between the resource pulses characteristic of monoculture farming and wildlife epidemiology. To understand how mass-flowering crops impact host communities and subsequently amplify or dilute parasitism, we surveyed wild and managed bees in a monoculture landscape with varying degrees of floral diversification. We screened 1509 bees from 16 genera in sunflower fields and in non-crop flowering habitat across 200 km2 of the California Central Valley. We found that mass-flowering crops increase bee abundance. Wild bee abundance was subsequently associated with higher parasite presence, but only in sites with a low abundance of non-crop flowers. Bee traits related to higher dispersal ability (body size) and diet breadth (pollen lecty) were also positively related to parasite presence. Our results highlight the importance of non-crop flowering habitat for supporting bee communities. We suggest monoculture alone cannot support healthy bees.
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Affiliation(s)
- Hamutahl Cohen
- Institute of Food and Agricultural Sciences, University of Florida, Collier County Extension Service, 14700 Immokalee Road, Naples, FL 34120, USA.,Institute for Ecology and Evolution, University of Oregon, 272 Onyx Bridge, Eugene, OR 97403, USA.,Department of Entomology, University of California, Riverside, 417 Entomology Building, Riverside, CA 92521, USA
| | - Gordon P Smith
- Institute for Ecology and Evolution, University of Oregon, 272 Onyx Bridge, Eugene, OR 97403, USA.,Department of Entomology, University of California, Riverside, 417 Entomology Building, Riverside, CA 92521, USA
| | - Hillary Sardiñas
- California Association of Resource Conservation Districts, 801 K Street, MS 14-15, Sacramento, CA 95814, USA
| | - Jocelyn F Zorn
- Institute for Ecology and Evolution, University of Oregon, 272 Onyx Bridge, Eugene, OR 97403, USA.,Department of Entomology, University of California, Riverside, 417 Entomology Building, Riverside, CA 92521, USA
| | - Quinn S McFrederick
- Department of Entomology, University of California, Riverside, 417 Entomology Building, Riverside, CA 92521, USA
| | - S Hollis Woodard
- Department of Entomology, University of California, Riverside, 417 Entomology Building, Riverside, CA 92521, USA
| | - Lauren C Ponisio
- Institute for Ecology and Evolution, University of Oregon, 272 Onyx Bridge, Eugene, OR 97403, USA.,Department of Entomology, University of California, Riverside, 417 Entomology Building, Riverside, CA 92521, USA
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43
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Cuenca PR, Key S, Jumail A, Surendra H, Ferguson HM, Drakeley CJ, Fornace K. Epidemiology of the zoonotic malaria Plasmodium knowlesi in changing landscapes. ADVANCES IN PARASITOLOGY 2021; 113:225-286. [PMID: 34620384 DOI: 10.1016/bs.apar.2021.08.006] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
Abstract
Within the past two decades, incidence of human cases of the zoonotic malaria Plasmodium knowlesi has increased markedly. P. knowlesi is now the most common cause of human malaria in Malaysia and threatens to undermine malaria control programmes across Southeast Asia. The emergence of zoonotic malaria corresponds to a period of rapid deforestation within this region. These environmental changes impact the distribution and behaviour of the simian hosts, mosquito vector species and human populations, creating new opportunities for P. knowlesi transmission. Here, we review how landscape changes can drive zoonotic disease emergence, examine the extent and causes of these changes across Southeast and identify how these mechanisms may be impacting P. knowlesi dynamics. We review the current spatial epidemiology of reported P. knowlesi infections in people and assess how these demographic and environmental changes may lead to changes in transmission patterns. Finally, we identify opportunities to improve P. knowlesi surveillance and develop targeted ecological interventions within these landscapes.
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Affiliation(s)
- Pablo Ruiz Cuenca
- Faculty of Infectious and Tropical Diseases, London School of Hygiene and Tropical Medicine, London, United Kingdom
| | - Stephanie Key
- Faculty of Infectious and Tropical Diseases, London School of Hygiene and Tropical Medicine, London, United Kingdom
| | | | - Henry Surendra
- Eijkman-Oxford Clinical Research Unit, Jakarta, Indonesia; Centre for Tropical Medicine, Faculty of Medicine, Public Health and Nursing, Universitas Gadjah Mada, Yogyakarta, Indonesia
| | - Heather M Ferguson
- Institute of Biodiversity, Animal Health and Comparative Medicine, University of Glasgow, Glasgow, Scotland, United Kingdom
| | - Chris J Drakeley
- Faculty of Infectious and Tropical Diseases, London School of Hygiene and Tropical Medicine, London, United Kingdom
| | - Kimberly Fornace
- Faculty of Infectious and Tropical Diseases, London School of Hygiene and Tropical Medicine, London, United Kingdom; Institute of Biodiversity, Animal Health and Comparative Medicine, University of Glasgow, Glasgow, Scotland, United Kingdom.
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44
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Wang YXG, Matson KD, Santini L, Visconti P, Hilbers JP, Huijbregts MAJ, Xu Y, Prins HHT, Allen T, Huang ZYX, de Boer WF. Mammal assemblage composition predicts global patterns in emerging infectious disease risk. GLOBAL CHANGE BIOLOGY 2021; 27:4995-5007. [PMID: 34214237 PMCID: PMC8518613 DOI: 10.1111/gcb.15784] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/05/2020] [Revised: 06/13/2021] [Accepted: 06/13/2021] [Indexed: 06/13/2023]
Abstract
As a source of emerging infectious diseases, wildlife assemblages (and related spatial patterns) must be quantitatively assessed to help identify high-risk locations. Previous assessments have largely focussed on the distributions of individual species; however, transmission dynamics are expected to depend on assemblage composition. Moreover, disease-diversity relationships have mainly been studied in the context of species loss, but assemblage composition and disease risk (e.g. infection prevalence in wildlife assemblages) can change without extinction. Based on the predicted distributions and abundances of 4466 mammal species, we estimated global patterns of disease risk through the calculation of the community-level basic reproductive ratio R0, an index of invasion potential, persistence, and maximum prevalence of a pathogen in a wildlife assemblage. For density-dependent diseases, we found that, in addition to tropical areas which are commonly viewed as infectious disease hotspots, northern temperate latitudes included high-risk areas. We also forecasted the effects of climate change and habitat loss from 2015 to 2035. Over this period, many local assemblages showed no net loss of species richness, but the assemblage composition (i.e. the mix of species and their abundances) changed considerably. Simultaneously, most areas experienced a decreased risk of density-dependent diseases but an increased risk of frequency-dependent diseases. We further explored the factors driving these changes in disease risk. Our results suggest that biodiversity and changes therein jointly influence disease risk. Understanding these changes and their drivers and ultimately identifying emerging infectious disease hotspots can help health officials prioritize resource distribution.
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Affiliation(s)
- Yingying X. G. Wang
- Wildlife Ecology and Conservation GroupWageningen University and ResearchWageningenThe Netherlands
- Department of Biological and Environmental ScienceUniversity of JyväskyläJyväskyläFinland
| | - Kevin D. Matson
- Wildlife Ecology and Conservation GroupWageningen University and ResearchWageningenThe Netherlands
| | - Luca Santini
- Department of Biology and Biotechnologies “Charles Darwin”Sapienza University of RomeRomeItaly
- Institute of Research on Terrestrial Ecosystems (CNR‐IRET)National Research CouncilMonterotondo (Rome)Italy
- Department of Environmental ScienceRadboud UniversityNijmegenThe Netherlands
| | - Piero Visconti
- International Institute for Applied System AnalysisLaxenburgAustria
- Institute of ZoologyZoological Society of LondonLondonUK
| | - Jelle P. Hilbers
- Department of Environmental ScienceRadboud UniversityNijmegenThe Netherlands
| | | | - Yanjie Xu
- Wildlife Ecology and Conservation GroupWageningen University and ResearchWageningenThe Netherlands
- The Finnish Museum of Natural HistoryUniversity of HelsinkiHelsinkiFinland
| | - Herbert H. T. Prins
- Wildlife Ecology and Conservation GroupWageningen University and ResearchWageningenThe Netherlands
- Department of Animal SciencesWageningen University and ResearchWageningenThe Netherlands
| | | | - Zheng Y. X. Huang
- Wildlife Ecology and Conservation GroupWageningen University and ResearchWageningenThe Netherlands
- College of Life SciencesNanjing Normal UniversityNanjingChina
| | - Willem F. de Boer
- Wildlife Ecology and Conservation GroupWageningen University and ResearchWageningenThe Netherlands
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45
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Keesing F, Ostfeld RS. Dilution effects in disease ecology. Ecol Lett 2021; 24:2490-2505. [PMID: 34482609 PMCID: PMC9291114 DOI: 10.1111/ele.13875] [Citation(s) in RCA: 33] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/09/2021] [Accepted: 08/19/2021] [Indexed: 01/03/2023]
Abstract
For decades, people have reduced the transmission of pathogens by adding low‐quality hosts to managed environments like agricultural fields. More recently, there has been interest in whether similar ‘dilution effects’ occur in natural disease systems, and whether these effects are eroded as diversity declines. For some pathogens of plants, humans and other animals, the highest‐quality hosts persist when diversity is lost, so that high‐quality hosts dominate low‐diversity communities, resulting in greater pathogen transmission. Meta‐analyses reveal that these natural dilution effects are common. However, studying them remains challenging due to limitations on the ability of researchers to manipulate many disease systems experimentally, difficulties of acquiring data on host quality and confusion about what should and should not be considered a dilution effect. Because dilution effects are widely used in managed disease systems and have been documented in a variety of natural disease systems, their existence should not be considered controversial. Important questions remain about how frequently they occur and under what conditions to expect them. There is also ongoing confusion about their relationships to both pathogen spillover and general biogeographical correlations between diversity and disease, which has resulted in an inconsistent and confusing literature. Progress will require rigorous and creative research.
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46
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Nunn CL, Vining AQ, Chakraborty D, Reiskind MH, Young HS. Effects of host extinction and vector preferences on vector-borne disease risk in phylogenetically structured host-hector communities. PLoS One 2021; 16:e0256456. [PMID: 34424937 PMCID: PMC8382198 DOI: 10.1371/journal.pone.0256456] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/17/2021] [Accepted: 08/08/2021] [Indexed: 11/26/2022] Open
Abstract
Anthropogenic disturbance impacts the phylogenetic composition and diversity of ecological communities. While changes in diversity are known to dramatically change species interactions and alter disease dynamics, the effects of phylogenetic changes in host and vector communities on disease have been relatively poorly studied. Using a theoretical model, we investigated how phylogeny and extinction influence network structural characteristics relevant to disease transmission in disturbed environments. We modelled a multi-host, multi-vector community as a bipartite ecological network, where nodes represent host and vector species and edges represent connections among them through vector feeding, and we simulated vector preferences and threat status on host and parasite phylogenies. We then simulated loss of hosts, including phylogenetically clustered losses, to investigate how extinction influences network structure. We compared effects of phylogeny and extinction to those of host specificity, which we predicted to strongly increase network modularity and reduce disease prevalence. The simulations revealed that extinction often increased modularity, with higher modularity as species loss increased, although not as much as increasing host specificity did. These results suggest that extinction itself, all else being equal, may reduce disease prevalence in disturbed communities. However, in real communities, systematic patterns in species loss (e.g. favoring high competence species) or changes in abundance may counteract these effects. Unexpectedly, we found that effects of phylogenetic signal in host and vector traits were relatively weak, and only important when phylogenetic signal of host and vector traits were similar, or when these traits both varied.
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Affiliation(s)
- Charles L. Nunn
- Department of Evolutionary Anthropology, Duke University, Durham, North Carolina, United States of America
- Duke Global Health Institute, Durham, North Carolina, United States of America
| | - Alexander Q. Vining
- Department of Evolutionary Anthropology, Duke University, Durham, North Carolina, United States of America
- Graduate Program in Animal Behavior, UC Davis, Davis, California, United States of America
| | - Debapriyo Chakraborty
- Department of Evolutionary Anthropology, Duke University, Durham, North Carolina, United States of America
- INRAE ENVT IHAP, National Veterinary School of Toulouse, Toulouse, France
| | - Michael H. Reiskind
- Department of Entomology and Plant Pathology, North Carolina State University, Raleigh, North Carolina, United States of America
| | - Hillary S. Young
- Department of Ecology, Evolution and Marine Biology, University of California, Santa Barbara, California, United States of America
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47
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The rise of ecological parasitology: twelve landmark advances that changed its history. Int J Parasitol 2021; 51:1073-1084. [PMID: 34390744 DOI: 10.1016/j.ijpara.2021.07.001] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2021] [Revised: 06/29/2021] [Accepted: 07/07/2021] [Indexed: 11/23/2022]
Abstract
In the five decades since the first publication of the International Journal for Parasitology, ecological parasitology has grown from modest beginnings to become a modern discipline with a strong theoretical foundation, a diverse toolkit, and a multidisciplinary approach. In this review, I highlight 12 advances in the field that have spurred its growth over the past 50 years. Where relevant, I identify pivotal contributions that have altered the course of research, as well as the influence of developments in other fields such as mainstream ecology and molecular biology. The 12 key advances discussed are in areas including parasite population dynamics and community assembly, the regulation of host population abundance and food web structure, parasites as agents of natural selection, the impacts of biodiversity and anthropogenic changes on host-parasite interactions, the biogeography of parasite diversity, and the evolutionary genetics of parasites. I conclude by identifying some challenges and opportunities lying ahead, which need to be met for the future growth of ecological research on host-parasite interactions.
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48
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Lacher TE, Kennerley R, Long B, McCay S, Roach NS, Turvey ST, Young RP. Support for rodent ecology and conservation to advance zoonotic disease research. CONSERVATION BIOLOGY : THE JOURNAL OF THE SOCIETY FOR CONSERVATION BIOLOGY 2021; 35:1061-1062. [PMID: 34085734 DOI: 10.1111/cobi.13763] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/10/2021] [Revised: 04/21/2021] [Accepted: 05/11/2021] [Indexed: 06/12/2023]
Affiliation(s)
- Thomas E Lacher
- Department of Ecology and Conservation Biology, Texas A&M University, College Station, Texas, USA
- Re: Wild, Austin, Texas, USA
| | | | | | - Shelby McCay
- Department of Ecology and Conservation Biology, Texas A&M University, College Station, Texas, USA
| | - Nicolette S Roach
- Department of Ecology and Conservation Biology, Texas A&M University, College Station, Texas, USA
- Re: Wild, Austin, Texas, USA
| | - Samuel T Turvey
- Institute of Zoology, Zoological Society of London, Regent's Park, UK
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49
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Diuk-Wasser MA, VanAcker MC, Fernandez MP. Impact of Land Use Changes and Habitat Fragmentation on the Eco-epidemiology of Tick-Borne Diseases. JOURNAL OF MEDICAL ENTOMOLOGY 2021; 58:1546-1564. [PMID: 33095859 DOI: 10.1093/jme/tjaa209] [Citation(s) in RCA: 67] [Impact Index Per Article: 22.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/15/2020] [Indexed: 06/11/2023]
Abstract
The incidence of tick-borne diseases has increased in recent decades and accounts for the majority of vector-borne disease cases in temperate areas of Europe, North America, and Asia. This emergence has been attributed to multiple and interactive drivers including changes in climate, land use, abundance of key hosts, and people's behaviors affecting the probability of human exposure to infected ticks. In this forum paper, we focus on how land use changes have shaped the eco-epidemiology of Ixodes scapularis-borne pathogens, in particular the Lyme disease spirochete Borrelia burgdorferi sensu stricto in the eastern United States. We use this as a model system, addressing other tick-borne disease systems as needed to illustrate patterns or processes. We first examine how land use interacts with abiotic conditions (microclimate) and biotic factors (e.g., host community composition) to influence the enzootic hazard, measured as the density of host-seeking I. scapularis nymphs infected with B. burgdorferi s.s. We then review the evidence of how specific landscape configuration, in particular forest fragmentation, influences the enzootic hazard and disease risk across spatial scales and urbanization levels. We emphasize the need for a dynamic understanding of landscapes based on tick and pathogen host movement and habitat use in relation to human resource provisioning. We propose a coupled natural-human systems framework for tick-borne diseases that accounts for the multiple interactions, nonlinearities and feedbacks in the system and conclude with a call for standardization of methodology and terminology to help integrate studies conducted at multiple scales.
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Affiliation(s)
- Maria A Diuk-Wasser
- Department of Ecology, Evolution and Environmental Biology, Columbia University, New York
| | - Meredith C VanAcker
- Department of Ecology, Evolution and Environmental Biology, Columbia University, New York
| | - Maria P Fernandez
- Department of Ecology, Evolution and Environmental Biology, Columbia University, New York
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50
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Ferraguti M, Martínez-de la Puente J, Jiménez–Clavero MÁ, Llorente F, Roiz D, Ruiz S, Soriguer R, Figuerola J. A field test of the dilution effect hypothesis in four avian multi-host pathogens. PLoS Pathog 2021; 17:e1009637. [PMID: 34161394 PMCID: PMC8221496 DOI: 10.1371/journal.ppat.1009637] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2021] [Accepted: 05/12/2021] [Indexed: 11/18/2022] Open
Abstract
The Dilution Effect Hypothesis (DEH) argues that greater biodiversity lowers the risk of disease and reduces the rates of pathogen transmission since more diverse communities harbour fewer competent hosts for any given pathogen, thereby reducing host exposure to the pathogen. DEH is expected to operate most intensely in vector-borne pathogens and when species-rich communities are not associated with increased host density. Overall, dilution will occur if greater species diversity leads to a lower contact rate between infected vectors and susceptible hosts, and between infected hosts and susceptible vectors. Field-based tests simultaneously analysing the prevalence of several multi-host pathogens in relation to host and vector diversity are required to validate DEH. We tested the relationship between the prevalence in house sparrows (Passer domesticus) of four vector-borne pathogens-three avian haemosporidians (including the avian malaria parasite Plasmodium and the malaria-like parasites Haemoproteus and Leucocytozoon) and West Nile virus (WNV)-and vertebrate diversity. Birds were sampled at 45 localities in SW Spain for which extensive data on vector (mosquitoes) and vertebrate communities exist. Vertebrate censuses were conducted to quantify avian and mammal density, species richness and evenness. Contrary to the predictions of DEH, WNV seroprevalence and haemosporidian prevalence were not negatively associated with either vertebrate species richness or evenness. Indeed, the opposite pattern was found, with positive relationships between avian species richness and WNV seroprevalence, and Leucocytozoon prevalence being detected. When vector (mosquito) richness and evenness were incorporated into the models, all the previous associations between WNV prevalence and the vertebrate community variables remained unchanged. No significant association was found for Plasmodium prevalence and vertebrate community variables in any of the models tested. Despite the studied system having several characteristics that should favour the dilution effect (i.e., vector-borne pathogens, an area where vector and host densities are unrelated, and where host richness is not associated with an increase in host density), none of the relationships between host species diversity and species richness, and pathogen prevalence supported DEH and, in fact, amplification was found for three of the four pathogens tested. Consequently, the range of pathogens and communities studied needs to be broadened if we are to understand the ecological factors that favour dilution and how often these conditions occur in nature.
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Affiliation(s)
- Martina Ferraguti
- Department of Wetland Ecology, Doñana Biological Station (EBD–CSIC), Seville, Spain
| | - Josué Martínez-de la Puente
- Department of Wetland Ecology, Doñana Biological Station (EBD–CSIC), Seville, Spain
- CIBER of Epidemiology and Public Health (CIBERESP), Madrid, Spain
| | - Miguel Ángel Jiménez–Clavero
- CIBER of Epidemiology and Public Health (CIBERESP), Madrid, Spain
- Centro de Investigación en Sanidad Animal, Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA–CISA), Valdeolmos, Madrid, Spain
| | - Francisco Llorente
- Centro de Investigación en Sanidad Animal, Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA–CISA), Valdeolmos, Madrid, Spain
| | - David Roiz
- Department of Wetland Ecology, Doñana Biological Station (EBD–CSIC), Seville, Spain
| | - Santiago Ruiz
- CIBER of Epidemiology and Public Health (CIBERESP), Madrid, Spain
- Diputación de Huelva, Área de Medio Ambiente, Servicio de Control de Mosquitos, Huelva, Spain
| | - Ramón Soriguer
- CIBER of Epidemiology and Public Health (CIBERESP), Madrid, Spain
- Department of Ethology & Biodiversity Conservation, Doñana Biological Station (EBD–CSIC), Seville, Spain
| | - Jordi Figuerola
- Department of Wetland Ecology, Doñana Biological Station (EBD–CSIC), Seville, Spain
- CIBER of Epidemiology and Public Health (CIBERESP), Madrid, Spain
- * E-mail:
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