1
|
Isolation of nematophagous fungi from soil samples collected from three different agro-ecologies of Ethiopia. BMC Microbiol 2022; 22:159. [PMID: 35715731 PMCID: PMC9204992 DOI: 10.1186/s12866-022-02572-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2021] [Accepted: 06/07/2022] [Indexed: 11/17/2022] Open
Abstract
Background Several species of nematophagous fungi exist in nature that can capture and kill nematodes as natural predators of soil-dwelling worms. These are important in agriculture and animal husbandry as biological control agents. The diversity of nematophagous fungi found from soil had not been studied in Ethiopia. Objective This study aimed to isolate Nematophagous Fungi from Soil Samples Collected From three Different Agro-Ecologies of Ethiopia. Methods Cross-sectional study was conducted and samples were collected from three different agro-climatic zones of Ethiopia; Debre-Berhan (highland), Bishoftu (mid-altitude), and Awash (lowland). Twenty-seven soil samples were randomly taken from each of the three different agro-ecological climates (9 from each agro-ecological climatic zone). For each study site, samples were collected from the soil of decomposed animal feces/dung, agricultural/farmlands, and forest lands in triplicates. Results The present study disclosed that nematophagous fungi were widespread from the study area. A total of 33 species of nematophagous fungi belonging to four genera, Arthrobotryes, Paecilomyces, Monacrosporium, and Harposporium were identified. Arthrobotrys were the most commonly isolated genera followed by Paecilomyces. The six identified species were Arthrobotrys oligospora, Paecilomyces lilacinus, Arthrobotryes dactyloides, Monacosporum eudermatum, Harposporium helicoides, and Monacosporum cionopagum. Conclusion This study indicated that Arthrobothryes oligospora was the most common species in Bishoftu and Awash whereas. In Debre-Berhan, Paecilomyces lilacinus was the most prevalent species. Monacosporum cionapagum was not isolated from dung soil and agricultural soil whereas Harposporium helicoides and Arthrobothryes dactyloides were not found from dung and forest soil respectively. Supplementary Information The online version contains supplementary material available at 10.1186/s12866-022-02572-4.
Collapse
|
2
|
Fan Y, Zhang W, Chen Y, Xiang M, Liu X. DdaSTE12 is involved in trap formation, ring inflation, conidiation, and vegetative growth in the nematode-trapping fungus Drechslerella dactyloides. Appl Microbiol Biotechnol 2021; 105:7379-7393. [PMID: 34536100 DOI: 10.1007/s00253-021-11455-z] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2021] [Revised: 07/06/2021] [Accepted: 07/09/2021] [Indexed: 11/28/2022]
Abstract
Ste12 transcription factors, downstream of mitogen-activated protein kinase (MAPK) signalling pathways, are exclusively found in the fungal kingdom and regulate fungal mating, development, and pathogenicity. The nematode-trapping fungus Drechslerella dactyloides can capture free-living nematodes using constricting rings by cell inflation within 1 s when stimulated by nematodes entering the rings. The MAPK signalling pathways are involved in the trap formation of nematode-trapping fungi, but their downstream regulation is not clearly understood. In this study, disruption of the DdaSTE12 gene in D. dactyloides disabled cell inflation of constricting rings and led to an inability to capture nematodes. The number of septa of constricting rings and the ring cell vacuoles were changed in ΔDdaSTE12. Compared with the wild type, ΔDdaSTE12 reduced trap formation, conidiation, and vegetative growth by 79.3%, 80.3%, and 21.5%, respectively. The transcriptomes of ΔDdaSTE12-3, compared with those of the wild type, indicated that the expression of genes participating in trap formation processes, including signal transduction (Gpa2 and a 7-transmembrane receptor), vesicular transport and cell fusion (MARVEL domain-containing proteins), and nematode infection (PEX11 and CFEM domain-containing proteins), is regulated by DdaSTE12. The results suggest that DdaSTE12 is involved in trap formation and ring cell inflation, as well as conidiation and vegetative growth, by regulating a wide range of downstream functions. Our findings expanded the roles of Ste12 homologous transcription factors in the development of constricting rings and provided new insights into the downstream regulation of the MAPK signalling pathway involved in nematode predation. KEY POINTS: • DdaSTE12 was the first gene disrupted in D. dactyloides. • DdaSTE12 is related to ring cell inflation, vegetative growth, and conidiation. • DdaSTE12 deletion resulted in defects in trap formation and ring development.
Collapse
Affiliation(s)
- Yani Fan
- State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, No. 3 Park 1, Beichen West Rd., Chaoyang District, Beijing, 100101, China.,University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Weiwei Zhang
- State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, No. 3 Park 1, Beichen West Rd., Chaoyang District, Beijing, 100101, China.,University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Yue Chen
- Department of Microbiology, College of Life Science, Nankai University, Tianjin, 300071, China
| | - Meichun Xiang
- State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, No. 3 Park 1, Beichen West Rd., Chaoyang District, Beijing, 100101, China.
| | - Xingzhong Liu
- Department of Microbiology, College of Life Science, Nankai University, Tianjin, 300071, China.
| |
Collapse
|
3
|
Zhou D, Xu J, Dong J, Li H, Wang D, Gu J, Zhang KQ, Zhang Y. Historical Differentiation and Recent Hybridization in Natural Populations of the Nematode-Trapping Fungus Arthrobotrys oligospora in China. Microorganisms 2021; 9:1919. [PMID: 34576814 PMCID: PMC8465350 DOI: 10.3390/microorganisms9091919] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/23/2021] [Revised: 09/06/2021] [Accepted: 09/07/2021] [Indexed: 01/10/2023] Open
Abstract
Maintaining the effects of nematode-trapping fungi (NTF) agents in order to control plant-parasitic nematodes (PPNs) in different ecological environments has been a major challenge in biological control applications. To achieve such an objective, it is important to understand how populations of the biocontrol agent NTF are geographically and ecologically structured. A previous study reported evidence for ecological adaptation in the model NTF species Arthrobotrys oligospora. However, their large-scale geographic structure, patterns of gene flow, their potential phenotypic diversification, and host specialization remain largely unknown. In this study, we developed a new panel of 20 polymorphic short tandem repeat (STR) markers and analyzed 239 isolates of A. oligospora from 19 geographic populations in China. In addition, DNA sequences at six nuclear gene loci and strain mating types (MAT) were obtained for these strains. Our analyses suggest historical divergence within the A. oligospora population in China. The genetically differentiated populations also showed phenotypic differences that may be related to their ecological adaptations. Interestingly, our analyses identified evidence for recent dispersion and hybridization among the historically subdivided geographic populations in nature. Together, our results indicate a changing population structure of A. oligospora in China and that care must be taken in selecting the appropriate strains as biocontrol agents that can effectively reproduce in agriculture soil while maintaining their nematode-trapping ability.
Collapse
Affiliation(s)
- Duanyong Zhou
- State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan, Key Laboratory for Southwest Microbial Diversity of the Ministry of Education, Yunnan University, Kunming 650032, China; (D.Z.); (J.D.); (H.L.); (D.W.)
- School of Life Science, Yunnan University, Kunming 650032, China;
- School of Biology and Chemistry, Xingyi Normal University for Nationalities, Xingyi 562400, China
| | - Jianping Xu
- State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan, Key Laboratory for Southwest Microbial Diversity of the Ministry of Education, Yunnan University, Kunming 650032, China; (D.Z.); (J.D.); (H.L.); (D.W.)
- Department of Biology, McMaster University, Hamilton, ON L8S 4K1, Canada
| | - Jianyong Dong
- State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan, Key Laboratory for Southwest Microbial Diversity of the Ministry of Education, Yunnan University, Kunming 650032, China; (D.Z.); (J.D.); (H.L.); (D.W.)
- School of Life Science, Yunnan University, Kunming 650032, China;
| | - Haixia Li
- State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan, Key Laboratory for Southwest Microbial Diversity of the Ministry of Education, Yunnan University, Kunming 650032, China; (D.Z.); (J.D.); (H.L.); (D.W.)
- School of Life Science, Yunnan University, Kunming 650032, China;
| | - Da Wang
- State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan, Key Laboratory for Southwest Microbial Diversity of the Ministry of Education, Yunnan University, Kunming 650032, China; (D.Z.); (J.D.); (H.L.); (D.W.)
- School of Life Science, Yunnan University, Kunming 650032, China;
| | - Juan Gu
- School of Life Science, Yunnan University, Kunming 650032, China;
| | - Ke-Qin Zhang
- State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan, Key Laboratory for Southwest Microbial Diversity of the Ministry of Education, Yunnan University, Kunming 650032, China; (D.Z.); (J.D.); (H.L.); (D.W.)
| | - Ying Zhang
- State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan, Key Laboratory for Southwest Microbial Diversity of the Ministry of Education, Yunnan University, Kunming 650032, China; (D.Z.); (J.D.); (H.L.); (D.W.)
| |
Collapse
|
4
|
Wilschut RA, Geisen S. Nematodes as Drivers of Plant Performance in Natural Systems. TRENDS IN PLANT SCIENCE 2021; 26:237-247. [PMID: 33214031 DOI: 10.1016/j.tplants.2020.10.006] [Citation(s) in RCA: 38] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/14/2020] [Revised: 09/23/2020] [Accepted: 10/20/2020] [Indexed: 05/21/2023]
Abstract
Nematodes form an important part of soil biodiversity as the most abundant and functionally diverse animals affecting plant performance. Most studies on plant-nematode interactions are focused on agriculture, while plant-nematode interactions in nature are less known. Here we highlight that nematodes can contribute to vegetation dynamics through direct negative effects on plants, and indirect positive effects through top-down predation on plant-associated organisms. Global change alters these interactions, of which better understanding is rapidly needed to better predict functional consequences. By expanding the knowledge of plant-nematode interactions in natural systems, an increase in basic understanding of key ecological topics such as plant-soil interactions and plant invasion dynamics will be obtained, while also increasing the insights and potential biotic repertoire to be applicable in sustainable plant management.
Collapse
Affiliation(s)
- Rutger A Wilschut
- Ecology Group, Department of Biology, University of Konstanz, Konstanz, Germany.
| | - Stefan Geisen
- Department of Nematology, Wageningen University and Research, Wageningen, The Netherlands.
| |
Collapse
|
5
|
Quevedo A, Vera-Morales M, Espinoza-Lozano F, Castañeda-Ruiz RF, Sosa del Castillo D, Magdama F. Assessing the predatory activity of Arthrobotrys oligosporus strain C-2197 as biocontrol of the root-knot nematode Meloidogyne spp. BIONATURA 2021. [DOI: 10.21931/rb/2021.06.01.22] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022] Open
Abstract
The root-knot nematode, Meloidogyne spp., is an endoparasite that infects plants' root system and causes yield losses in several important crops. Meloidogyne is one of the most devastating pests, so searching for effective biological agents is needed to mitigate its damage. In this study, the predatory activity of Arthrobotrys oligosporus Fresen strain C-2197, obtained from a tropical dry forest of Ecuador, was evaluated as a biocontrol alternative for root-knot caused by Meloidogyne spp. Our results showed that A. oligosporus C-2197 has predatory activity against juvenile nematodes, 72.31%, and 79% efficacy, for in vitro and greenhouse conditions. Besides, the studied strain showed growth-promoting activity, increasing leaf and root area of inoculated plants. Growth promoting activity was also observed in field tests. The present study validates the potential use of A. oligosporus as a biocontrol of Meloidogyne spp. in tomato production systems under greenhouse. It also presents useful information on the use of different cultivation media and substrates for massive A. oligosporus spore concentrates.
Collapse
Affiliation(s)
- Adela Quevedo
- ESPOL Polytechnic University, Escuela Superior Politécnica del Litoral, ESPOL, Centro de Investigaciones Biotecnológicas del Ecuador, Campus Gustavo Galindo Km. 30.5 Vía Perimetral, P.O. Box 09-01-5863, Guayaquil, Ecuador
| | - Marcos Vera-Morales
- ESPOL Polytechnic University, Escuela Superior Politécnica del Litoral, ESPOL, Centro de Investigaciones Biotecnológicas del Ecuador, Campus Gustavo Galindo Km. 30.5 Vía Perimetral, P.O. Box 09-01-5863, Guayaquil, Ecuador
| | - Fernando Espinoza-Lozano
- ESPOL Polytechnic University, Escuela Superior Politécnica del Litoral, ESPOL, Centro de Investigaciones Biotecnológicas del Ecuador, Campus Gustavo Galindo Km. 30.5 Vía Perimetral, P.O. Box 09-01-5863, Guayaquil, Ecuador
| | - Rafael F. Castañeda-Ruiz
- Instituto de Investigaciones Fundamentales en Agricultura (INIFAT), Tropical ‘Alejandro de Humboldt’, OSDE, Grupo Agrícola, Calle 1 Esq. 2, Santiago de Las Vegas, C. Habana, Cuba
| | - Daynet Sosa del Castillo
- ESPOL Polytechnic University, Escuela Superior Politécnica del Litoral, ESPOL, Centro de Investigaciones Biotecnológicas del Ecuador, Campus Gustavo Galindo Km. 30.5 Vía Perimetral, P.O. Box 09-01-5863, Guayaquil, Ecuador
| | - Freddy Magdama
- ESPOL Polytechnic University, Escuela Superior Politécnica del Litoral, ESPOL, Centro de Investigaciones Biotecnológicas del Ecuador, Campus Gustavo Galindo Km. 30.5 Vía Perimetral, P.O. Box 09-01-5863, Guayaquil, Ecuador
| |
Collapse
|
6
|
Zhang Y, Li S, Li H, Wang R, Zhang KQ, Xu J. Fungi-Nematode Interactions: Diversity, Ecology, and Biocontrol Prospects in Agriculture. J Fungi (Basel) 2020; 6:E206. [PMID: 33020457 PMCID: PMC7711821 DOI: 10.3390/jof6040206] [Citation(s) in RCA: 55] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2020] [Revised: 09/30/2020] [Accepted: 10/02/2020] [Indexed: 01/27/2023] Open
Abstract
Fungi and nematodes are among the most abundant organisms in soil habitats. They provide essential ecosystem services and play crucial roles for maintaining the stability of food-webs and for facilitating nutrient cycling. As two of the very abundant groups of organisms, fungi and nematodes interact with each other in multiple ways. Here in this review, we provide a broad framework of interactions between fungi and nematodes with an emphasis on those that impact crops and agriculture ecosystems. We describe the diversity and evolution of fungi that closely interact with nematodes, including food fungi for nematodes as well as fungi that feed on nematodes. Among the nematophagous fungi, those that produce specialized nematode-trapping devices are especially interesting, and a great deal is known about their diversity, evolution, and molecular mechanisms of interactions with nematodes. Some of the fungi and nematodes are significant pathogens and pests to crops. We summarize the ecological and molecular mechanisms identified so far that impact, either directly or indirectly, the interactions among phytopathogenic fungi, phytopathogenic nematodes, and crop plants. The potential applications of our understanding to controlling phytophagous nematodes and soilborne fungal pathogens in agricultural fields are discussed.
Collapse
Affiliation(s)
- Ying Zhang
- State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan, and Key Laboratory for Southwest Microbial Diversity of the Ministry of Education, Yunnan University, Kunming 650032, China; (Y.Z.); (S.L.); (H.L.); (R.W.)
| | - Shuoshuo Li
- State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan, and Key Laboratory for Southwest Microbial Diversity of the Ministry of Education, Yunnan University, Kunming 650032, China; (Y.Z.); (S.L.); (H.L.); (R.W.)
- School of Life Science, Yunnan University, Kunming 650032, China
| | - Haixia Li
- State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan, and Key Laboratory for Southwest Microbial Diversity of the Ministry of Education, Yunnan University, Kunming 650032, China; (Y.Z.); (S.L.); (H.L.); (R.W.)
- School of Life Science, Yunnan University, Kunming 650032, China
| | - Ruirui Wang
- State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan, and Key Laboratory for Southwest Microbial Diversity of the Ministry of Education, Yunnan University, Kunming 650032, China; (Y.Z.); (S.L.); (H.L.); (R.W.)
- School of Life Science, Yunnan University, Kunming 650032, China
| | - Ke-Qin Zhang
- State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan, and Key Laboratory for Southwest Microbial Diversity of the Ministry of Education, Yunnan University, Kunming 650032, China; (Y.Z.); (S.L.); (H.L.); (R.W.)
| | - Jianping Xu
- State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan, and Key Laboratory for Southwest Microbial Diversity of the Ministry of Education, Yunnan University, Kunming 650032, China; (Y.Z.); (S.L.); (H.L.); (R.W.)
- Department of Biology, McMaster University, Hamilton, ON L8S 4K1, Canada
| |
Collapse
|
7
|
Harkes P, van Steenbrugge JJM, van den Elsen SJJ, Suleiman AKA, de Haan JJ, Holterman MHM, Helder J. Shifts in the Active Rhizobiome Paralleling Low Meloidogyne chitwoodi Densities in Fields Under Prolonged Organic Soil Management. FRONTIERS IN PLANT SCIENCE 2020; 10:1697. [PMID: 31998352 PMCID: PMC6965313 DOI: 10.3389/fpls.2019.01697] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/23/2019] [Accepted: 12/02/2019] [Indexed: 06/10/2023]
Abstract
Plants manipulate their rhizosphere community in a species and even a plant life stage-dependent manner. In essence plants select, promote and (de)activate directly the local bacterial and fungal community, and indirectly representatives of the next trophic level, protists and nematodes. By doing so, plants enlarge the pool of bioavailable nutrients and maximize local disease suppressiveness within the boundaries set by the nature of the local microbial community. MiSeq sequencing of specific variable regions of the 16S or 18S ribosomal DNA (rDNA) is widely used to map microbial shifts. As current RNA extraction procedures are time-consuming and expensive, the rRNA-based characterization of the active microbial community is taken along less frequently. Recently, we developed a relatively fast and affordable protocol for the simultaneous extraction of rDNA and rRNA from soil. Here, we investigated the long-term impact of three type of soil management, two conventional and an organic regime, on soil biota in fields naturally infested with the Columbian root-knot nematode Meloidogyne chitwoodi with pea (Pisum sativum) as the main crop. For all soil samples, large differences were observed between resident (rDNA) and active (rRNA) microbial communities. Among the four organismal group under investigation, the bacterial community was most affected by the main crop, and unweighted and weighted UniFrac analyses (explaining respectively 16.4% and 51.3% of the observed variation) pointed at a quantitative rather than a qualitative shift. LEfSe analyses were employed for each of the four organismal groups to taxonomically pinpoint the effects of soil management. Concentrating on the bacterial community in the pea rhizosphere, organic soil management resulted in a remarkable activation of members of the Burkholderiaceae, Enterobacteriaceae, and Pseudomonadaceae. Prolonged organic soil management was also accompanied by significantly higher densities of bacterivorous nematodes, whereas levels of M. chitwoodi had dropped drastically. Though present and active in the fields under investigation Orbiliaceae, a family harboring numerous nematophagous fungi, was not associated with the M. chitwoodi decline. A closer look revealed that a local accumulation and activation of Pseudomonas, a genus that includes a number of nematode-suppressive species, paralleled the lower M. chitwoodi densities. This study underlines the relevance of taking along both resident and active fractions of multiple organismal groups while mapping the impact of e.g. crops and soil management regimes.
Collapse
Affiliation(s)
- Paula Harkes
- Laboratory of Nematology, Department of Plant Sciences, Wageningen University & Research, Wageningen, Netherlands
| | | | | | - Afnan Khalil Ahmad Suleiman
- Department of Microbial Ecology, NIOO-KNAW, Wageningen, Netherlands
- Department of Microbiological Water Quality and Health, KWR Watercycle Research Institute, PE Nieuwegein, Netherlands
| | - Johannes Jan de Haan
- Open Teelten, Department of Wageningen Plant Research, Wageningen University & Research, Lelystad, Netherlands
| | | | - Johannes Helder
- Laboratory of Nematology, Department of Plant Sciences, Wageningen University & Research, Wageningen, Netherlands
| |
Collapse
|
8
|
Mahoney CJ, Strongman DB. Nematophagous fungi from cattle manure in four states of decomposition at three sites in Nova Scotia, Canada. Mycologia 2018. [DOI: 10.1080/00275514.1994.12026422] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
Affiliation(s)
- C. J. Mahoney
- Biology Department, Saint Mary's University, Halifax, Nova Scotia B3H 3C3, Canada
| | - D. B. Strongman
- Biology Department, Saint Mary's University, Halifax, Nova Scotia B3H 3C3, Canada
| |
Collapse
|
9
|
Koppenhöfer AM, Jaffee BA, Muldoon AE, Strong DR. Suppression of an entomopathogenic nematode by the nematode-trapping fungi Geniculifera paucispora and Monacrosporium eudermatum as affected by the fungus Arthrobotrys oligospora. Mycologia 2018. [DOI: 10.1080/00275514.1997.12026773] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
Affiliation(s)
| | - Bruce A. Jaffee
- Department of Nematology, University of California, Davis, California 95616-8668, U.S.A
| | - Ann E. Muldoon
- Department of Nematology, University of California, Davis, California 95616-8668, U.S.A
| | - Donald R. Strong
- Bodega Marine Laboratory, University of California, Bodega Bay, California 94923, U.S.A
| |
Collapse
|
10
|
Schulenburg H, Félix MA. The Natural Biotic Environment of Caenorhabditis elegans. Genetics 2017; 206:55-86. [PMID: 28476862 PMCID: PMC5419493 DOI: 10.1534/genetics.116.195511] [Citation(s) in RCA: 264] [Impact Index Per Article: 33.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2016] [Accepted: 02/28/2017] [Indexed: 01/05/2023] Open
Abstract
Organisms evolve in response to their natural environment. Consideration of natural ecological parameters are thus of key importance for our understanding of an organism's biology. Curiously, the natural ecology of the model species Caenorhabditis elegans has long been neglected, even though this nematode has become one of the most intensively studied models in biological research. This lack of interest changed ∼10 yr ago. Since then, an increasing number of studies have focused on the nematode's natural ecology. Yet many unknowns still remain. Here, we provide an overview of the currently available information on the natural environment of C. elegans We focus on the biotic environment, which is usually less predictable and thus can create high selective constraints that are likely to have had a strong impact on C. elegans evolution. This nematode is particularly abundant in microbe-rich environments, especially rotting plant matter such as decomposing fruits and stems. In this environment, it is part of a complex interaction network, which is particularly shaped by a species-rich microbial community. These microbes can be food, part of a beneficial gut microbiome, parasites and pathogens, and possibly competitors. C. elegans is additionally confronted with predators; it interacts with vector organisms that facilitate dispersal to new habitats, and also with competitors for similar food environments, including competitors from congeneric and also the same species. Full appreciation of this nematode's biology warrants further exploration of its natural environment and subsequent integration of this information into the well-established laboratory-based research approaches.
Collapse
Affiliation(s)
- Hinrich Schulenburg
- Zoological Institute, Christian-Albrechts Universitaet zu Kiel, 24098 Kiel, Germany
| | - Marie-Anne Félix
- Institut de Biologie de l'Ecole Normale Supérieure, Centre National de la Recherche Scientifique, Institut National de la Santé et de la Recherche Médicale, École Normale Supérieure, L'université de Recherche Paris Sciences et Lettres, 75005, France
| |
Collapse
|
11
|
Pathak E, Campos-Herrera R, El-Borai FE, Duncan LW. Spatial relationships between entomopathogenic nematodes and nematophagous fungi in Florida citrus orchards. J Invertebr Pathol 2017; 144:37-46. [PMID: 28087206 DOI: 10.1016/j.jip.2017.01.005] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2017] [Accepted: 01/09/2017] [Indexed: 11/28/2022]
Abstract
Relationships between entomopathogenic nematodes (EPNs), nematophagous fungi (NF) and soil physical and chemical properties were studied in a survey of 53 citrus orchards in central ridge and flatwoods ecoregions of Florida. Seven species of NF associated with nematodes were quantified directly using a real time qPCR assay. All nematophagous fungi studied except Arthrobotrys musiformis and Hirsutella rhossiliensis were frequently detected (24-56%) in both regions. Paecilomyces lilacinus and Gamsylella gephyropagumwere encountered more frequently in the flatwoods (P=0.03) and on the ridge (P=0.02), respectively. Redundancy analysis revealed seven abiotic and biotic factors as significantly related to the NF occurrence. Multiple regression of fungi on these variables explained 78%, 66%, 48%, 36%, 23% and 4% of the variation in Catenaria sp., A. musiformis, A. dactyloides, P. lilacinus, A. oligospora and G. gepharopagum, respectively. When the data from citrus were pooled with those reported previously from natural areas and subjected to principle component analysis, the first two principle components explained 43% of the variation in NF communities. The surveys (citrus vs natural areas) were discriminated by PC2 (P<0.001) and the ecoregion by PC1 (P<0.002), and all but one NF species were related (P<0.01) to one or both components. NF communities tended to have more species and greater diversity in the flatwoods, where EPN richness and diversity were the least. However, the strength of associations between individual EPN and NF species as measured by SADIE reflected the associations between each species and ground water depth, suggesting that ecoregion preferences affected the species associations. Within each ecoregion, significant relationships between the individual NF and EPN species measured by stepwise regression tended to be positive. The results did not support the hypothesis that NF modulate the spatial patterns of EPN species between or within these two ecoregions.
Collapse
Affiliation(s)
- Ekta Pathak
- Citrus Research and Education Center (CREC), University of Florida (UF), 700 Experiment Station Road, Fl 33850, USA; Sam Higginbottom Institute of Agriculture, Technology & Sciences, Allahabad, U.P., India
| | - Raquel Campos-Herrera
- Citrus Research and Education Center (CREC), University of Florida (UF), 700 Experiment Station Road, Fl 33850, USA; Instituto de Ciencias Agrarias, CSIC, Serrano 115 Dpdo, Madrid 28006, Spain
| | - Fahiem E El-Borai
- Citrus Research and Education Center (CREC), University of Florida (UF), 700 Experiment Station Road, Fl 33850, USA; Plant Protection Department, Faculty of Agriculture, Zagazig University, Egypt
| | - Larry W Duncan
- Citrus Research and Education Center (CREC), University of Florida (UF), 700 Experiment Station Road, Fl 33850, USA.
| |
Collapse
|
12
|
Abstract
Nematode-trapping fungi are a unique and intriguing group of carnivorous microorganisms that can trap and digest nematodes by means of specialized trapping structures. They can develop diverse trapping devices, such as adhesive hyphae, adhesive knobs, adhesive networks, constricting rings, and nonconstricting rings. Nematode-trapping fungi have been found in all regions of the world, from the tropics to Antarctica, from terrestrial to aquatic ecosystems. They play an important ecological role in regulating nematode dynamics in soil. Molecular phylogenetic studies have shown that the majority of nematode-trapping fungi belong to a monophyletic group in the order Orbiliales (Ascomycota). Nematode-trapping fungi serve as an excellent model system for understanding fungal evolution and interaction between fungi and nematodes. With the development of molecular techniques and genome sequencing, their evolutionary origins and divergence, and the mechanisms underlying fungus-nematode interactions have been well studied. In recent decades, an increasing concern about the environmental hazards of using chemical nematicides has led to the application of these biological control agents as a rapidly developing component of crop protection.
Collapse
Affiliation(s)
- Xiangzhi Jiang
- State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Chaoyang District, Beijing 100101, China
| | - Meichun Xiang
- State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Chaoyang District, Beijing 100101, China
| | - Xingzhong Liu
- State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Chaoyang District, Beijing 100101, China
| |
Collapse
|
13
|
Geisen S, Rosengarten J, Koller R, Mulder C, Urich T, Bonkowski M. Pack hunting by a common soil amoeba on nematodes. Environ Microbiol 2015; 17:4538-46. [DOI: 10.1111/1462-2920.12949] [Citation(s) in RCA: 64] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2015] [Revised: 06/08/2015] [Accepted: 06/08/2015] [Indexed: 11/30/2022]
Affiliation(s)
- Stefan Geisen
- Department of Terrestrial Ecology; Institute of Zoology; University of Cologne; Cologne Germany
- Department of Terrestrial Ecology; Netherlands Institute of Ecology (NIOO-KNAW); Wageningen The Netherlands
| | - Jamila Rosengarten
- Department of Terrestrial Ecology; Institute of Zoology; University of Cologne; Cologne Germany
| | - Robert Koller
- Department of Terrestrial Ecology; Institute of Zoology; University of Cologne; Cologne Germany
- Forschungszentrum Jülich; IBG-2: Plant Sciences; Jülich Germany
| | - Christian Mulder
- National Institute for Public Health and the Environment (RIVM); Bilthoven The Netherlands
| | - Tim Urich
- Department of Ecogenomics and Systems Biology; University of Vienna; Vienna Austria
- Bacterial Physiology; Institute for Microbiology; Ernst Moritz Arndt University; Greifswald Germany
| | - Michael Bonkowski
- Department of Terrestrial Ecology; Institute of Zoology; University of Cologne; Cologne Germany
| |
Collapse
|
14
|
Chisholm AD. Epidermal Wound Healing in the Nematode Caenorhabditis elegans. Adv Wound Care (New Rochelle) 2015; 4:264-271. [PMID: 25945288 PMCID: PMC4398003 DOI: 10.1089/wound.2014.0552] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2014] [Accepted: 05/07/2014] [Indexed: 01/03/2023] Open
Abstract
Significance: Healing of epidermal wounds is a fundamentally conserved process found in essentially all multicellular organisms. Studies of anatomically simple and genetically tractable model invertebrates can illuminate the roles of key genes and mechanisms in wound healing. Recent Advances: The nematode skin is composed of a simple epithelium, the epidermis (also known as hypodermis), and an associated extracellular cuticle. Nematodes likely have a robust capacity for epidermal repair; yet until recently, relatively few studies have directly analyzed wound healing. Here we review epidermal wound responses and repair in the model nematode Caenorhabditis elegans. Critical Issues: Wounding the epidermis triggers a cutaneous innate immune response and wound closure. The innate immune response involves upregulation of a suite of antimicrobial peptides. Wound closure involves a Ca2+-triggered rearrangement of the actin cytoskeleton. These processes appear to be initiated independently, yet, their coordinated activity allows the animal to survive otherwise fatal skin wounds. Future Directions: Unanswered questions include the nature of the damage-associated molecular patterns sensed by the epidermis, the signaling pathways relaying Ca2+ to the cytoskeleton, and the mechanisms of permeability barrier repair.
Collapse
Affiliation(s)
- Andrew D. Chisholm
- Section of Cell and Developmental Biology, Section of Neurobiology, Division of Biological Sciences, University of California San Diego, La Jolla, California
| |
Collapse
|
15
|
Liu K, Zhang W, Lai Y, Xiang M, Wang X, Zhang X, Liu X. Drechslerella stenobrocha genome illustrates the mechanism of constricting rings and the origin of nematode predation in fungi. BMC Genomics 2014; 15:114. [PMID: 24507587 PMCID: PMC3924618 DOI: 10.1186/1471-2164-15-114] [Citation(s) in RCA: 51] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/18/2013] [Accepted: 02/04/2014] [Indexed: 11/10/2022] Open
Abstract
BACKGROUND Nematode-trapping fungi are a unique group of organisms that can capture nematodes using sophisticated trapping structures. The genome of Drechslerella stenobrocha, a constricting-ring-forming fungus, has been sequenced and reported, and provided new insights into the evolutionary origins of nematode predation in fungi, the trapping mechanisms, and the dual lifestyles of saprophagy and predation. RESULTS The genome of the fungus Drechslerella stenobrocha, which mechanically traps nematodes using a constricting ring, was sequenced. The genome was 29.02 Mb in size and was found rare instances of transposons and repeat induced point mutations, than that of Arthrobotrys oligospora. The functional proteins involved in nematode-infection, such as chitinases, subtilisins, and adhesive proteins, underwent a significant expansion in the A. oligospora genome, while there were fewer lectin genes that mediate fungus-nematode recognition in the D. stenobrocha genome. The carbohydrate-degrading enzyme catalogs in both species were similar to those of efficient cellulolytic fungi, suggesting a saprophytic origin of nematode-trapping fungi. In D. stenobrocha, the down-regulation of saprophytic enzyme genes and the up-regulation of infection-related genes during the capture of nematodes indicated a transition between dual life strategies of saprophagy and predation. The transcriptional profiles also indicated that trap formation was related to the protein kinase C (PKC) signal pathway and regulated by Zn(2)-C6 type transcription factors. CONCLUSIONS The genome of D. stenobrocha provides support for the hypothesis that nematode trapping fungi evolved from saprophytic fungi in a high carbon and low nitrogen environment. It reveals the transition between saprophagy and predation of these fungi and also proves new insights into the mechanisms of mechanical trapping.
Collapse
Affiliation(s)
| | | | | | | | | | | | - Xingzhong Liu
- State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, No 3 1st Beichen West Rd,, Chaoyang District, Beijing 100101, China.
| |
Collapse
|
16
|
A modeling study on the role of fungi in removing inorganic pollutants. Math Biosci 2013; 244:116-24. [DOI: 10.1016/j.mbs.2013.04.014] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2012] [Revised: 04/26/2013] [Accepted: 04/30/2013] [Indexed: 11/21/2022]
|
17
|
|
18
|
Nematode-trapping fungi eavesdrop on nematode pheromones. Curr Biol 2012; 23:83-6. [PMID: 23246407 DOI: 10.1016/j.cub.2012.11.035] [Citation(s) in RCA: 108] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2012] [Revised: 11/19/2012] [Accepted: 11/19/2012] [Indexed: 12/18/2022]
Abstract
The recognition of molecular patterns associated with specific pathogens or food sources is fundamental to ecology and plays a major role in the evolution of predator-prey relationships. Recent studies showed that nematodes produce an evolutionarily highly conserved family of small molecules, the ascarosides, which serve essential functions in regulating nematode development and behavior. Here, we show that nematophagous fungi, natural predators of soil-dwelling nematodes, can detect and respond to ascarosides. Nematophagous fungi use specialized trapping devices to catch and consume nematodes, and previous studies demonstrated that most fungal species do not produce traps constitutively but rather initiate trap formation in response to their prey. We found that ascarosides, which are constitutively secreted by many species of soil-dwelling nematodes, represent a conserved molecular pattern used by nematophagous fungi to detect prey and trigger trap formation. Ascaroside-induced morphogenesis is conserved in several closely related species of nematophagous fungi and occurs only under nutrient-deprived conditions. Our results demonstrate that microbial predators eavesdrop on chemical communication among their metazoan prey to regulate morphogenesis, providing a striking example of predator-prey coevolution. We anticipate that these findings will have broader implications for understanding other interkingdom interactions involving nematodes, which are found in almost any ecological niche on Earth.
Collapse
|
19
|
Pathak E, El-Borai FE, Campos-Herrera R, Johnson EG, Stuart RJ, Graham JH, Duncan LW. Use of real-time PCR to discriminate parasitic and saprophagous behaviour by nematophagous fungi. Fungal Biol 2012; 116:563-73. [DOI: 10.1016/j.funbio.2012.02.005] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/19/2011] [Revised: 01/06/2012] [Accepted: 02/24/2012] [Indexed: 10/28/2022]
|
20
|
Tanney JB, Hutchison LJ. The production of nematode-immobilizing secretory cells by Climacodon septentrionalis. MYCOSCIENCE 2012. [DOI: 10.1007/s10267-011-0128-1] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
|
21
|
Wharton DA, Murray DS. 3-D reconstruction from optical sections of the traps of the nematophagous fungus Arthrobotrys oligospora. J Microsc 2011. [DOI: 10.1111/j.1365-2818.1989.tb00578.x] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
|
22
|
Maguire SM, Clark CM, Nunnari J, Pirri JK, Alkema MJ. The C. elegans touch response facilitates escape from predacious fungi. Curr Biol 2011; 21:1326-30. [PMID: 21802299 DOI: 10.1016/j.cub.2011.06.063] [Citation(s) in RCA: 50] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/24/2011] [Revised: 06/30/2011] [Accepted: 06/30/2011] [Indexed: 11/19/2022]
Abstract
Predator-prey interactions are vital determinants in the natural selection of behavioral traits. Gentle touch to the anterior half of the body of Caenorhabditis elegans elicits an escape response in which the animal quickly reverses and suppresses exploratory head movements [1, 2]. Here, we investigate the ecological significance of the touch response in predator-prey interactions between C. elegans and predacious fungi that catch nematodes using constricting hyphal rings. We show that the constricting rings of Drechslerella doedycoides catch early larval stages with a diameter similar to the trap opening. There is a delay between the ring entry and ring closure, which allows the animal to withdraw from the trap before being caught. Mutants that fail to suppress head movements in response to touch are caught more efficiently than the wild-type. This demonstrates that the coordination of motor programs allows C. elegans to smoothly retract from a fungal noose and evade capture. Our results suggest that selective pressures imposed by predacious fungi have shaped the evolution of C. elegans escape behavior.
Collapse
Affiliation(s)
- Sean M Maguire
- Department of Neurobiology, University of Massachusetts Medical School, Worcester, MA 01605, USA
| | | | | | | | | |
Collapse
|
23
|
Maciel A, Freitas L, Campos A, Lopes E, Araújo J. The biological control of Ancylostoma spp. dog infective larvae by Duddingtonia flagrans in a soil microcosm. Vet Parasitol 2010; 173:262-70. [DOI: 10.1016/j.vetpar.2010.06.027] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2010] [Revised: 06/19/2010] [Accepted: 06/21/2010] [Indexed: 11/15/2022]
|
24
|
Abstract
AbstractThe most widely used and successful cultural practices for managing plantparasitic nematodes are resistant cultivars and some elements of cropping systems, such as rotation crops, cover crops, or nematode-antagonistic crops. Exclusion and sanitation practices, such as use of nematode-free planting material, site selection, and weed management, are useful in limiting infestations. Soil solarization, organic amendments, biological control, fallow, flooding, timing of planting dates, or tillage practices may be helpful in some areas, but additional research is needed to optimize their use. Most management methods emphasize reduction of nematode populations, but improvement of crop tolerance to nematodes should not be overlooked. For their successful use, most of these alternative methods require detailed knowledge of nematode and plant biology and ecology, and it may be necessary to integrate several practices for maximum nematode suppression. Although the basic principles of nematode management are generally known, detailed data often are lacking on specific combinations of nematodes and host crop cultivars. Consequently, the availability of such data will likely determine whether nematodes can be managed successfully in a particular situation.
Collapse
|
25
|
Maciel A, Araújo J, Campos A, Benjamin L, Freitas L. Scanning electron microscopy of Ancylostoma spp. dog infective larvae captured and destroyed by the nematophagous fungus Duddingtonia flagrans. Micron 2009; 40:463-70. [DOI: 10.1016/j.micron.2008.12.007] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/22/2008] [Revised: 12/16/2008] [Accepted: 12/16/2008] [Indexed: 11/24/2022]
|
26
|
Maciel A, Araújo J, Campos A, Lopes E, Freitas L. Predation of Ancylostoma spp. dog infective larvae by nematophagous fungi in different conidial concentrations. Vet Parasitol 2009; 161:239-47. [DOI: 10.1016/j.vetpar.2009.01.015] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/05/2008] [Revised: 01/05/2009] [Accepted: 01/18/2009] [Indexed: 11/30/2022]
|
27
|
Predatory activity of the fungi Duddingtonia flagrans, Monacrosporium thaumasium, Monacrosporium sinense and Arthrobotrys robusta on Angiostrongylus vasorum first-stage larvae. J Helminthol 2009; 83:303-8. [DOI: 10.1017/s0022149x09232342] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Abstract
AbstractAngiostrongylus vasorum is a nematode that parasitizes domestic dogs and wild canids. We compared the predatory capacity of isolates from the predatory fungi Duddingtonia flagrans (AC001), Monacrosporium thaumasium (NF34), Monacrosporium sinense (SF53) and Arthrobotrys robusta (I31) on first-stage larvae (L1) of A. vasorum under laboratory conditions. L1A. vasorum were plated on 2% water-agar (WA) Petri dishes marked into 4 mm diameter fields with the four grown isolates and a control without fungus. Plates of treated groups contained each 1000 L1A. vasorum and 1000 conidia of the fungal isolates AC001, NF34, SF53 and I31 on 2% WA. Plates of the control group (without fungus) contained only 1000 L1A. vasorum on 2% WA. Ten random fields (4 mm diameter) were examined per plate of treated and control groups, every 24 h for 7 days. Nematophagous fungi were not observed in the control group during the experiment. There was no variation in the predatory capacity among the tested fungal isolates (P>0.05) during the 7 days of the experiment. There was a significant reduction (P < 0.05) of 80.3%, 74.5%, 74.2% and 71.8% in the means of A. vasorum L1 recovered from treatments with isolates AC001, NF34, SF53 and I31, respectively, compared to the control without fungi. In this study, the four isolates of predatory fungi were efficient in the in vitro capture and destruction of A. vasorum L1, confirming previous work on the efficiency of nematophagous fungi in the control of nematode parasites of dogs and as a possible alternative method of biological control.
Collapse
|
28
|
|
29
|
|
30
|
Koziak AT, Cheng KC, Thorn RG. Phylogenetic analyses of Nematoctonus and Hohenbuehelia (Pleurotaceae). ACTA ACUST UNITED AC 2007. [DOI: 10.1139/b07-083] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Hohenbuehelia (Agaricales, Pleurotaceae) and Nematoctonus (Hyphomycetes) are the names for the sexual and asexual stages of a genus of nematode-destroying fungi (Basidiomycota). We obtained partial sequences of nuclear ribosomal DNA, including the internal transcribed spacer region and the 5′ end of the large subunit, of 37 isolates of Hohenbuehelia and Nematoctonus representing 13 of the 16 described species in Nematoctonus. Phylogenetic analyses support Hohenbuehelia–Nematoctonus as a monophyletic clade of the Pleurotaceae, within which the species were placed in five main subclades. Exclusively predatory species ( Nematoctonus brevisporus Thorn & G.L. Barron, Nematoctonus campylosporus Drechsler, Nematoctonus robustus F.R. Jones, and Nematoctonus sp. UAMH 5317) appear to be basal. In these species, adhesive knobs to capture prey are produced on their hyphae but not on their conidia. A single mycelial individual may feed on many nematodes. From these have arisen both exclusively parasitoid species ( Nematoctonus cylindrosporus Thorn & G.L. Barron, Nematoctonus leiosporus Drechsler, Nematoctonus leptosporus Drechsler, Nematoctonus pachysporus Drechsler, Nematoctonus tylosporus Drechsler), and species that we call intermediate predators ( Nematoctonus angustatus Thorn & G.L. Barron, Nematoctonus concurrens Drechsler, Nematoctonus geogenius Thorn & GL. Barron, Nematoctonus hamatus Thorn & G.L. Barron, and Nematoctonus subreniformis Thorn & G.L. Barron). Exclusively parasitoid species have conidia that germinate to form sticky knobs that attach to passing nematodes but lack adhesive knobs on the hyphae. Each mycelial individual feeds on only one nematode. Intermediate predators have adhesive knobs both on hyphae and on germinated conidia and can act in both predatory and parasitoid modes. Most morphospecies are resolved as monophyletic, but sequences of additional gene regions are required to clarify species limits within the N. angustatus – N. geogenius group.
Collapse
Affiliation(s)
| | - Kei Chin Cheng
- Department of Biology, University of Western Ontario, London, ON N6A 5B7, Canada
| | - R. Greg Thorn
- Department of Biology, University of Western Ontario, London, ON N6A 5B7, Canada
| |
Collapse
|
31
|
Su H, Hao Y, Mo M, Zhang K. The ecology of nematode-trapping hyphomycetes in cattle dung from three plateau pastures. Vet Parasitol 2007; 144:293-8. [PMID: 17113711 DOI: 10.1016/j.vetpar.2006.10.012] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/02/2006] [Revised: 10/13/2006] [Accepted: 10/17/2006] [Indexed: 11/24/2022]
Abstract
This paper investigated the influence of season and altitude on the occurrence of nematode-trapping fungi in cattle faeces. Six hundred and sixty samples of cattle faeces deposited on three plateau pastures with different altitudes in the west of Yunnan Province, China, were examined in 2004. A total of 17 species of nematode-trapping hyphomycetes were isolated from these samples. The predominant species from all three plateau pastures were Arthrobotrys oligospora, A. musiformis, Monacrosporium ellipsosporum, and M. thaumasium. Species with adhesive networks were the most frequently isolated. Overall, species diversity index was negatively correlated with altitude and was different among seasons within the same site. Levels of diversity were highest in the summer, followed by autumn, spring, and winter. The conidia of the hyphomycetes isolated here germinated normally on medium containing cattle faeces, with species developing adhesive networks having the highest rate of germination. However, the rate of conidial trap (CT) formation was lower in species with adhesive networks than those in other species.
Collapse
Affiliation(s)
- Hongyan Su
- Laboratory for Conservation and Utilization of Bio-resources, Yunnan University, Kunming Yunnan 650091, PR China
| | | | | | | |
Collapse
|
32
|
Gortari C, Cazau C, Hours R. Hongos nematófagos de huevos de Toxocara canis en un paseo público de La Plata, Argentina. Rev Iberoam Micol 2007; 24:24-8. [PMID: 17592887 DOI: 10.1016/s1130-1406(07)70005-0] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022] Open
Abstract
Fungi have showed a great potential for the biological control of nematodes. However, they have not been evaluated for the control of animal and/or human parasites transmitted by egg contaminated soils. Environmental contamination with Toxocara spp. eggs is a public health problem. Accidental swallowing of Toxocara canis eggs (a nematode of dogs) usually results on a zoonotic infection (toxocarosis). The objectives of this research were: 1) To test the presence of antagonistic fungi against T. canis in the soil in public places of La Plata city, Argentina, infected with eggs of this parasite, 2) To determine the possible association between biotic and abiotic factors of the soil with the presence of fungal parasites of egg nematodes. Soil samples were tested for: textural type, organic matter (%), pH, presence of egg-parasite fungi, of larvae and of nematode eggs, in particular of Toxocara spp. The studied area showed the following characteristics: pH: 6.6-8.0, organic matter: 1.2-70%, with a predominantly loam texture. The following antagonistic fungal genera were identified: Acremonium, Aspergillus, Chrysosporium, Fusarium, Humicola, Mortierella, Paecilomyces and Penicillium. A prevalence of 70% was detected for nematode eggs, of 33% for Toxocara spp. eggs and of 90% for larvae. No association between the presence of egg-parasite fungi and the considered factors was found. More studies are necessary to know the natural antagonism factors to T. canis eggs for its in situ biological control.
Collapse
Affiliation(s)
- Cecilia Gortari
- CIC-PBA and CINDEFI (CONICET-UNLP) Facultad de Ciencias Exactas, UNLP, La Plata, Argentina
| | | | | |
Collapse
|
33
|
Eapen SJ, Beena B, Ramana KV. Tropical soil microflora of spice-based cropping systems as potential antagonists of root-knot nematodes. J Invertebr Pathol 2005; 88:218-25. [PMID: 15955340 DOI: 10.1016/j.jip.2005.01.011] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2004] [Revised: 11/05/2004] [Accepted: 01/18/2005] [Indexed: 10/25/2022]
Abstract
Suppression of plant parasitic nematodes with nematode predators, parasites or antagonists is an eco-friendly approach than the toxic chemicals. In a study, soil borne fungi from the rhizosphere of major spice crops were collected from diverse cropping systems prevailing in three southern states of India. A series of in vitro studies were conducted using 73 freshly collected fungal isolates and 76 isolates obtained from other sources. Out of this 67 isolates were not parasitic on females of root-knot nematodes whereas 115 isolates, though colonized the egg masses, did not show any signs of parasitism on nematode eggs. Fifty-nine isolates showed 50-90% inhibition in egg hatch. Pochonia chlamydospora, Verticillium lecanii, Paecilomyces lilacinus, and few isolates of Trichoderma spp. showed >25% parasitism on root-knot nematode eggs. The most promising isolates in this study were one isolate each of Aspergillus (F.45), Fusarium (F.47), and Penicillium (F.59); three each isolates of Trichoderma (F.3, F.52, and F.60) and Pochonia (F.30 and Vc.3) Verticillium (Vl); and two isolates of fungi that could not be identified (F.28 and F.62). Parasitism by Aspergillus tamarii, Aspergillus ustus, Drechslera sp., Humicola sp., and Scopulariopsis sp. on root-knot nematode eggs or females, reported in the present study, are new reports.
Collapse
Affiliation(s)
- Santhosh J Eapen
- Division of Crop Protection, Indian Institute of Spices Research, Calicut 673 012, Kerala, India.
| | | | | |
Collapse
|
34
|
Mota MDA, Campos AK, Araújo JVD. Controle biológico de helmintos parasitos de animais: estágio atual e perspectivas futuras. PESQUISA VETERINARIA BRASILEIRA 2003. [DOI: 10.1590/s0100-736x2003000300001] [Citation(s) in RCA: 54] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
O controle biológico é um método desenvolvido para diminuir uma população de parasitas pela utilização de antagonista natural. A administração de fungos nematófagos aos animais domésticos é considerada uma promissora alternativa na profilaxia das helmintíases gastrintestinais parasitárias. Os fungos nematófagos desenvolvem estruturas em forma de armadilhas, responsáveis pela captura e destruição dos estágios infectantes dos nematóides. Os fungos dos gêneros Arthrobotrys, Duddingtonia e Monacrosporium têm demonstrado eficácia em experimentos laboratoriais e no campo no controle de parasitos de bovinos, eqüinos, ovinos e suínos. Diversas formulações fúngicas têm sido avaliadas, no entanto, ainda não há nenhum produto comercial disponível. A associação dos grupos de pesquisa e o envolvimento das indústrias poderão colaborar para o sucesso na implementação desta forma de controle.
Collapse
|
35
|
Timm L, Pearson D, Jaffee B. Nematode-trapping fungi in conventionally and organically managed corn-tomato rotations. Mycologia 2001. [DOI: 10.1080/00275514.2001.12061276] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
Affiliation(s)
- Lori Timm
- Department of Nematology, University of California at Davis, One Shields Ave., Davis, California 95616-8668
| | - Daralyn Pearson
- Department of Nematology, University of California at Davis, One Shields Ave., Davis, California 95616-8668
| | - Bruce Jaffee
- Department of Nematology, University of California at Davis, One Shields Ave., Davis, California 95616-8668
| |
Collapse
|
36
|
McSorley R, Duncan L. 8 Economic thresholds and nematode management. ADVANCES IN PLANT PATHOLOGY 1995. [DOI: 10.1016/s0736-4539(06)80010-3] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
|
37
|
Competitive interactions between two nematophagous fungi during infection and digestion of the nematode Panagrellus redivivus. ACTA ACUST UNITED AC 1994. [DOI: 10.1016/s0953-7562(09)81077-0] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
|
38
|
Observation of nematophagous fungi in natural soils by fluorescence microscopy and their correlation with isolation. ACTA ACUST UNITED AC 1993. [DOI: 10.1016/s0953-7562(09)80870-8] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
|
39
|
Grønvold J, Wolstrup J, Nansen P, Henriksen SA, Larsen M, Bresciani J. Biological control of nematode parasites in cattle with nematode-trapping fungi: a survey of Danish studies. Vet Parasitol 1993; 48:311-25. [PMID: 8346645 DOI: 10.1016/0304-4017(93)90165-j] [Citation(s) in RCA: 50] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
Abstract
In Denmark two series of experiments have been performed to study the interactions between larvae of bovine gastrointestinal nematode parasites and nematode-trapping fungi. For practical reasons we were interested in the possibility of depositing nematode-trapping fungi in cattle faeces after passage through the gastrointestinal tract. In the first series, laboratory tests with the fungus Arthrobotrys oligospora showed that motile free-living larvae of a wide range of animal-parasitic nematodes and some soil-living nematodes effectively induce the formation of traps. Larvae of all parasitic nematodes are rapidly captured in these traps. The induction of nets was influenced by temperature, number of larvae, atmosphere, light, and media composition. Captured first- and second-stage larvae were quickly penetrated and killed while third stage larvae were killed slowly, perhaps because they are partially protected by an outer dead sheath. Laboratory and field studies showed that when A. oligospora material was directly mixed into dung a significant reduction in the number of infective parasite larvae in the dung and surrounding herbage occurs. This reduction was also reflected in the acquired worm burden of calves grazing on fungal treated pasture. However, the A. oligospora strain studied in the above mentioned experiments did not survive passage through the alimentary tract of cattle. This prompted us to start a second series of experiments to isolate fungi that could survive gut passage of cattle. Different soil and compost samples were screened by an in vitro stress selection technique. This simulated certain important stress factors which occur during passage through the alimentary tract of ruminants. Rumen exposure was found to be a major limiting factor, but some Arthrobotrys and Duddingtonia strains survived submersion in rumen fluid. In a subsequent in vivo experiment, some of these survivors were fed to calves, and it was hereby demonstrated that isolates of both genera, i.e. Arthrobotrys and Duddingtonia, were able to survive passage through calves and significantly reduce the number of developing preparasitic larvae in dung of fungal treated calves. In a controlled field experiment, isolates of Duddingtonia reduced the level of infective third-stage larvae in herbage by 74-85%.
Collapse
Affiliation(s)
- J Grønvold
- Department of Veterinary Microbiology, Royal Veterinary and Agricultural University, Frederiksberg C, Denmark
| | | | | | | | | | | |
Collapse
|
40
|
Grønvold J, Wolstrup J, Nansen P, Henriksen SA. Nematode-trapping fungi against parasitic cattle nematodes. ACTA ACUST UNITED AC 1993; 9:137-40. [PMID: 15463737 DOI: 10.1016/0169-4758(93)90179-j] [Citation(s) in RCA: 23] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Interactions between larvae of bovine gastrointestinal nematode parasites and nematode-trapping fungi, such as Arthrobotrys and Duddingtonia species and strains have been studied in Denmark. In this article Jørn Grønvold, Jens Wolstrup, Peter Nansen and Svend Aage Henriksen discuss how these fungi are able to grow, trap and kill parasitic nematode larvae, both on agar in the laboratory and in cattle faeces in the field.
Collapse
Affiliation(s)
- J Grønvold
- Royal Veterinary and Agricultural University, 13 Bülowsvej, DK-1870 Frederiksberg C, Denmark
| | | | | | | |
Collapse
|
41
|
den Belder E, Boekestein A, van Esch JW, Thiel F. Low-temperature scanning electron microscopy in fungus-nematode interaction. SCANNING 1993; 15:37-42. [PMID: 8281360 DOI: 10.1002/sca.4950150106] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/22/2023]
Abstract
A comparative study has been made of different preparation techniques used for the scanning electron microscope (SEM), with regard to their application to fungus-nematode interaction. The preparation of frozen-hydrated specimens of both healthy and Arthrobotrys-oligospora-infected second-stage larvae of the root-knot nematode (Meloidogyne sp.) is described, and the results are compared with those obtained by critical point-drying and freeze-drying. In all cases the frozen-hydrated specimens consistently showed the best preservation.
Collapse
Affiliation(s)
- E den Belder
- Department of Biological and Integrated Control, DLO Research Institute for Plant Protection (IPO-DLO), Wageningen, The Netherlands
| | | | | | | |
Collapse
|
42
|
Abstract
Control of nematode parasites in ruminants is directed almost exclusively at the parasitic stage in the host using conventional anthelmintic therapy. However, to complete their life cycle, parasites have to develop through a series of free-living stages on pasture. It is within this environment that there is a vast range of cohabiting micro-organisms, some of which are known to infect or prey on nematodes. These include bacteria, protozoa, viruses and fungi. To date, most interest has been focused on those organisms producing chemical toxins which have been developed as anthelmintics, e.g. Streptomyces/avermectins. Yet the potential of predacious and nematoxic fungi and bacteria for the biological control of nematode parasites of livestock remains largely untapped. These organisms may well offer a cheaper and more sustainable approach to reducing the impact of parasitism in livestock.
Collapse
Affiliation(s)
- P J Waller
- CSIRO Division of Animal Health, McMaster Laboratory, Private Bag No. 1, Glebe, NSW 2037, Australia
| |
Collapse
|
43
|
Murray DS, Wharton DA. Capture and penetration processes of the free-living juveniles of Trichostrongylus colubriformis (Nematoda) by the nematophagous fungus, Arthrobotrys oligospora. Parasitology 1990; 101 Pt 1:93-100. [PMID: 2235080 DOI: 10.1017/s0031182000079798] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Abstract
The nematode-trapping fungus Arthrobotrys oligospora traps and invades all the free-living juvenile stages of the trichostrongyle nematode Trichostrongylus colubriformis. The processes of capture and invasion of the 1st-stage juveniles are described using differential interference contrast optics and 3-D reconstruction techniques. The adhesive responsible for capture is well preserved using a freeze-substitution technique for scanning electron microscopy. The invasion process of the ensheathed 3rd-stage juvenile of T. colubriformis takes much longer than in the 1st- or 2nd-stage juvenile and involves the formation of secondary infection pegs between the sheath and the cuticle which appear to penetrate the cuticle by physical pressure.
Collapse
Affiliation(s)
- D S Murray
- Department of Zoology, University of Otago, Dunedin, New Zealand
| | | |
Collapse
|
44
|
Wharton DA, Murray DS. Preparation of the nematode-trapping fungus, Arthrobotrys oligospora, for scanning electron microscopy by freeze substitution. J Microsc 1990; 158:81-5. [PMID: 2352273 DOI: 10.1111/j.1365-2818.1990.tb02979.x] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
A freeze-substitution technique for preparing fungal specimens for scanning electron microscopy is described. This involves cryofixation in liquid nitrogen, freeze substitution in methanol at -20 degrees C and critical-point drying. The trapping complexes and conidiophores of the nematophagous fungus Arthrobotrys oligospora are well preserved and retain their normal three-dimensional arrangement.
Collapse
Affiliation(s)
- D A Wharton
- Department of Zoology, University of Otago, Dunedin, New Zealand
| | | |
Collapse
|