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Xie W, Dhinojwala A, Gianneschi NC, Shawkey MD. Interactions of Melanin with Electromagnetic Radiation: From Fundamentals to Applications. Chem Rev 2024; 124:7165-7213. [PMID: 38758918 DOI: 10.1021/acs.chemrev.3c00858] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/19/2024]
Abstract
Melanin, especially integumentary melanin, interacts in numerous ways with electromagnetic radiation, leading to a set of critical functions, including radiation protection, UV-protection, pigmentary and structural color productions, and thermoregulation. By harnessing these functions, melanin and melanin-like materials can be widely applied to diverse applications with extraordinary performance. Here we provide a unified overview of the melanin family (all melanin and melanin-like materials) and their interactions with the complete electromagnetic radiation spectrum (X-ray, Gamma-ray, UV, visible, near-infrared), which until now has been absent from the literature and is needed to establish a solid fundamental base to facilitate their future investigation and development. We begin by discussing the chemistries and morphologies of both natural and artificial melanin, then the fundamentals of melanin-radiation interactions, and finally the exciting new developments in high-performance melanin-based functional materials that exploit these interactions. This Review provides both a comprehensive overview and a discussion of future perspectives for each subfield of melanin that will help direct the future development of melanin from both fundamental and applied perspectives.
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Affiliation(s)
- Wanjie Xie
- Department of Biology, Evolution and Optics of Nanostructure Group, University of Ghent, Gent 9000, Belgium
| | - Ali Dhinojwala
- School of Polymer Science and Polymer Engineering, The University of Akron, Akron, Ohio 44325, United States
| | - Nathan C Gianneschi
- Department of Chemistry, Department of Materials Science and Engineering, Department of Biomedical Engineering, Simpson-Querrey Institute, Chemistry of Life Processes Institute, Lurie Cancer Center, and International Institute of Nanotechnology, Northwestern University, Evanston, Illinois 60208, United States
| | - Matthew D Shawkey
- Department of Biology, Evolution and Optics of Nanostructure Group, University of Ghent, Gent 9000, Belgium
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Ren S, Zhang X, Pang Y, Qi Y, Huo L, Wu F, Shang Y, Xi J. RNA sequencing analysis reveals that missense mutation in SOX10 is associated with iris color phenotype in quail. Anim Genet 2024; 55:79-86. [PMID: 37905379 DOI: 10.1111/age.13371] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2023] [Revised: 10/10/2023] [Accepted: 10/14/2023] [Indexed: 11/02/2023]
Abstract
To investigate the molecular mechanisms underlying the differences in iris color in quail, the transcriptome of iris tissue from black quail and Korean quail at day 10 of hatching was RNA sequenced in this study. The differentially expressed genes (DEGs) were screened, functionally annotated and enriched after the quality control and mapping of the raw data. RT-qPCR validation was performed using EIF2S3 as an internal reference gene. The screened SNPs were studied by bioinformatics analysis and iris color correlation analysis. The results showed that there were 425 upregulated genes and 364 downregulated genes in 789 DEGs. Gene Ontology (GO) enrichment analysis revealed that 139 DEGs were significantly enriched in 154 GO terms. The Kyoto Encyclopedia of Genes and Genomes enrichment results showed that the Notch signaling pathway, melanogenesis and tyrosine metabolism were associated with pigment synthesis (p < 0.05). The expression levels of the ASIP, MLPH, PMEL, TYR and SOX10 genes were significantly different in black quail iris and Korean quail iris, as verified by RT-qPCR. The SOX10 gene c.324G>C mutation, which caused the replacement of p.Glu108Asp, had a highly significant correlation with iris color in black quail and Korean quail, which may be one of the reasons for different in iris color between these two quail species.
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Affiliation(s)
- Shiwei Ren
- College of Animal Science, Henan University of Science and Technology, Luoyang, China
| | - Xiaohui Zhang
- College of Animal Science, Henan University of Science and Technology, Luoyang, China
| | - Youzhi Pang
- Luoyang Key Laboratory of Animal Genetics and Breeding, Luoyang, China
| | - Yanxia Qi
- Luoyang Key Laboratory of Animal Genetics and Breeding, Luoyang, China
| | - Linke Huo
- College of Animal Science, Henan University of Science and Technology, Luoyang, China
| | - Fanghu Wu
- College of Animal Science, Henan University of Science and Technology, Luoyang, China
| | - Yuanyuan Shang
- College of Animal Science, Henan University of Science and Technology, Luoyang, China
| | - Jinquan Xi
- College of Animal Science, Henan University of Science and Technology, Luoyang, China
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Ebrahimi M, Gharravi AM, Aliyari R, Emamian MH, Khabazkhoob M, Hashemi H, Fotouhi A. The association between iris color and refractive errors in children. Sci Rep 2024; 14:2192. [PMID: 38272946 PMCID: PMC10810802 DOI: 10.1038/s41598-024-52807-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2023] [Accepted: 01/23/2024] [Indexed: 01/27/2024] Open
Abstract
This study aimed to evaluate the association between iris color and refractive errors in children aged 6-12 years. This cross-sectional study was based on data obtained from the first phase of the Shahroud Schoolchildren Eye Cohort Study. The target population was 6 to12 year-old students living in urban and rural areas. Iris colors were classified by comparing eye colors with close-up images of iris colors. Myopia was defined as a spherical equivalent (SE) ≤ - 0.5 diopter and hyperopia was defined as SE ≥ 2 diopter in cycloplegic refraction. The association of iris color with hyperopia and myopia was investigated by fitting two separate multiple logistic regression models adjusted for place of residence, age, sex, and times for outdoor activity and near work. Among the 5394 participates with the mean age of 9.7 year, the prevalence of myopia and hyperopia was 4.8% and 4.7% respectively. The number and proportion (in parentheses) of amber, light blue, light brown, dark brown, gray, green and hazel iris colors were 19(0.4%), 26(0.5%), 645(12.0%), 4517(83.7%), 4(0.1%), 59(1.1%), and 124(2.3%) respectively. Compared to dark brown, the odds ratios and 95% confidence intervals (in parentheses) of myopia were 4.8(1.2-18.7), 0.8(0.1-5.8), 1.0(0.7-1.5), 0.4(0.1-2.7) and 0.6(0.2-1.8) for amber, light blue, light brown, green and hazel iris colors in multiple logistic regression model. No significant association was observed between iris colors and hyperopia. This study shows that amber iris is significantly associated with higher odds of myopia. These children should be further monitored and examined. More studies with higher sample size in all iris colors are recommended.
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Affiliation(s)
- Mehrdad Ebrahimi
- Student Research Committee, School of Medicine, Shahroud University of Medical Sciences, Shahroud, Iran
| | | | - Roqayeh Aliyari
- Ophthalmic Epidemiology Research Center, Shahroud University of Medical Sciences, Shahroud, Iran
| | - Mohammad Hassan Emamian
- Ophthalmic Epidemiology Research Center, Shahroud University of Medical Sciences, Shahroud, Iran.
| | - Mehdi Khabazkhoob
- Department of Medical Surgical Nursing, School of Nursing and Midwifery, Shahid Beheshti University of Medical Sciences, Tehran, Iran
| | - Hassan Hashemi
- Noor Research Center for Ophthalmic Epidemiology, Noor Eye Hospital, Tehran, Iran
| | - Akbar Fotouhi
- Department of Epidemiology and Biostatistics, School of Public Health, Tehran University of Medical Sciences, Tehran, Iran
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Kobus M, Żądzińska E, Sitek A, Pełka J, Rożniecki JJ, Antoszewski B. Risk of Migraine in Europeans with Low Melanin Levels—A Population Based Case-Control Study. Brain Sci 2022; 12:brainsci12050620. [PMID: 35625007 PMCID: PMC9139100 DOI: 10.3390/brainsci12050620] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/25/2022] [Revised: 05/06/2022] [Accepted: 05/07/2022] [Indexed: 02/04/2023] Open
Abstract
Populations with a relatively low concentration of melanin, e.g., inhabitants of Europe, North America, and Australia, are the most vulnerable to the harmful effects of UV radiation. Individuals with fair phototype are at greatest risk of developing skin cancer. Several neurological studies present that light skin may modify the risk of Alzheimer’s and Parkinson’s diseases. However, the relationship between migraine and skin pigmentation has not been investigated yet. The objective of this study is to provide evidence of the relationship between skin pigmentation and migraine prevalence in adults. We examined a group of 148 adults (33 men, 115 women) with migraine and a control group of 107 adults (43 men, 64 women). Parameters of skin pigmentation (melanin index, erythema index, CIElab, and RGB scales) were measured using a DSM II Cortex Technology dermospectrophotometer. Risk of migraine in lightly pigmented adults was elevated. Individuals with a low melanin index had over 3-fold increased risk of migraine (women: OR 3.53, men: OR 3.73). Fair phototype, which results from lightly pigmented skin, was associated with migraine prevalence. Migraineurs should take extra care to protect their skin from the negative effects of solar radiation.
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Affiliation(s)
- Magdalena Kobus
- Department of Anthropology, Faculty of Biology and Environmental Protection, University of Lodz, 90-237 Lodz, Poland; (E.Ż.); (A.S.)
- Correspondence:
| | - Elżbieta Żądzińska
- Department of Anthropology, Faculty of Biology and Environmental Protection, University of Lodz, 90-237 Lodz, Poland; (E.Ż.); (A.S.)
- Biological Anthropology and Comparative Anatomy Research Unit, School of Medicine, University of Adelaide, Adelaide 5005, SA, Australia
| | - Aneta Sitek
- Department of Anthropology, Faculty of Biology and Environmental Protection, University of Lodz, 90-237 Lodz, Poland; (E.Ż.); (A.S.)
| | - Jacek Pełka
- Department of Neurology, Norbert Barlicki Memory University Teaching Hospital, 90-153 Lodz, Poland;
| | - Jacek J. Rożniecki
- Department of Neurology, Stroke and Neurorehabilitation, Medical University of Lodz, 90-153 Lodz, Poland;
| | - Bogusław Antoszewski
- Department of Plastic, Reconstructive and Aesthetic Surgery, Institute of Surgery, Medical University of Lodz, 90-153 Lodz, Poland;
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Bedran ZV, Zhukov SS, Abramov PA, Tyurenkov IO, Gorshunov BP, Mostert AB, Motovilov KA. Water-Activated Semiquinone Formation and Carboxylic Acid Dissociation in Melanin Revealed by Infrared Spectroscopy. Polymers (Basel) 2021; 13:4403. [PMID: 34960952 PMCID: PMC8705668 DOI: 10.3390/polym13244403] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/29/2021] [Revised: 11/29/2021] [Accepted: 12/09/2021] [Indexed: 01/22/2023] Open
Abstract
Eumelanin is a widespread biomacromolecule pigment in the biosphere and has been widely investigated for numerous bioelectronics and energetic applications. Many of these applications depend on eumelanin's ability to conduct proton current at various levels of hydration. The origin of this behavior is connected to a comproportionation reaction between oxidized and reduced monomer moieties and water. A hydration-dependent FTIR spectroscopic study on eumelanin is presented herein, which allows for the first time tracking the comproportionation reaction via the gradual increase of the overall aromaticity of melanin monomers in the course of hydration. We identified spectral features associated with the presence of specific "one and a half" C𝌁O bonds, typical for o-semiquinones. Signatures of semiquinone monomers with internal hydrogen bonds and that carboxylic groups, in contrast to semiquinones, begin to dissociate at the very beginning of melanin hydration were indicated. As such, we suggest a modification to the common hydration-dependent conductivity mechanism and propose that the conductivity at low hydration is dominated by carboxylic acid protons, whereas higher hydration levels manifest semiquinone protons.
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Affiliation(s)
- Zakhar V. Bedran
- Center for Photonics and 2D Materials, Moscow Institute of Physics and Technology, Institute Lane 9, 141701 Dolgoprudny, Russia; (Z.V.B.); (S.S.Z.); (P.A.A.); (I.O.T.); (B.P.G.)
| | - Sergey S. Zhukov
- Center for Photonics and 2D Materials, Moscow Institute of Physics and Technology, Institute Lane 9, 141701 Dolgoprudny, Russia; (Z.V.B.); (S.S.Z.); (P.A.A.); (I.O.T.); (B.P.G.)
| | - Pavel A. Abramov
- Center for Photonics and 2D Materials, Moscow Institute of Physics and Technology, Institute Lane 9, 141701 Dolgoprudny, Russia; (Z.V.B.); (S.S.Z.); (P.A.A.); (I.O.T.); (B.P.G.)
| | - Ilya O. Tyurenkov
- Center for Photonics and 2D Materials, Moscow Institute of Physics and Technology, Institute Lane 9, 141701 Dolgoprudny, Russia; (Z.V.B.); (S.S.Z.); (P.A.A.); (I.O.T.); (B.P.G.)
| | - Boris P. Gorshunov
- Center for Photonics and 2D Materials, Moscow Institute of Physics and Technology, Institute Lane 9, 141701 Dolgoprudny, Russia; (Z.V.B.); (S.S.Z.); (P.A.A.); (I.O.T.); (B.P.G.)
| | - A. Bernardus Mostert
- Department of Chemistry, Swansea University, Singleton Park, Swansea SA2 8PP, UK;
| | - Konstantin A. Motovilov
- Center for Photonics and 2D Materials, Moscow Institute of Physics and Technology, Institute Lane 9, 141701 Dolgoprudny, Russia; (Z.V.B.); (S.S.Z.); (P.A.A.); (I.O.T.); (B.P.G.)
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Mostert AB. Melanin, the What, the Why and the How: An Introductory Review for Materials Scientists Interested in Flexible and Versatile Polymers. Polymers (Basel) 2021; 13:1670. [PMID: 34065580 PMCID: PMC8161012 DOI: 10.3390/polym13101670] [Citation(s) in RCA: 19] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/25/2021] [Revised: 05/18/2021] [Accepted: 05/18/2021] [Indexed: 01/13/2023] Open
Abstract
Today, western society is facing challenges to create new medical technologies to service an aging population as well as the ever-increasing e-waste of electronic devices and sensors. A key solution to these challenges will be the use of biomaterials and biomimetic systems. One material that has been receiving serious attention for its biomedical and device applications is eumelanin. Eumelanin, or commonly known as melanin, is nature's brown-black pigment and is a poly-indolequinone biopolymer, which possess unique physical and chemical properties for material applications. Presented here is a review, aimed at polymer and other materials scientists, to introduce eumelanin as a potential material for research. Covered here are the chemical and physical structures of melanin, an overview of its unique physical and chemical properties, as well as a wide array of applications, but with an emphasis on device and sensing applications. The review is then finished by introducing interested readers to novel synthetic protocols and post synthesis fabrication techniques to enable a starting point for polymer research in this intriguing and complex material.
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Affiliation(s)
- A Bernardus Mostert
- Department of Chemistry, Swansea University, Singleton Park, Wales SA2 8PP, UK
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Quantitative Cluster Headache Analysis for Neurological Diagnosis Support Using Statistical Classification. INFORMATION 2020. [DOI: 10.3390/info11080393] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022] Open
Abstract
Cluster headache (CH) belongs to the group III of The International Classification of Headaches. It is characterized by attacks of severe pain in the ocular/periocular area accompanied by cranial autonomic signs, including parasympathetic activation and sympathetic hypofunction on the symptomatic side. Iris pigmentation occurs in the neonatal period and depends on the sympathetic tone in each eye. We hypothesized that the presence of visible or subtle color iris changes in both eyes could be used as a quantitative biomarker for screening and early detection of CH. This work scrutinizes the scope of an automatic diagnosis-support system for early detection of CH, by using as indicator the error rate provided by a statistical classifier designed to identify the eye (left vs. right) from iris pixels in color images. Systematic tests were performed on a database with images of 11 subjects (four with CH, four with other ophthalmic diseases affecting the iris pigmentation, and three control subjects). Several aspects were addressed to design the classifier, including: (a) the most convenient color space for the statistical classifier; (b) whether the use of features associated to several color spaces is convenient; (c) the robustness of the classifier to iris spatial subregions; (d) the contribution of the pixels neighborhood. Our results showed that a reduced value for the error rate (lower than 0.25) can be used as CH marker, whereas structural regions of the iris image need to be taken into account. The iris color feature analysis using statistical classification is a potentially useful technique to investigate disorders affecting the autonomous nervous system in CH.
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Dorgaleleh S, Naghipoor K, Barahouie A, Dastaviz F, Oladnabi M. Molecular and biochemical mechanisms of human iris color: A comprehensive review. J Cell Physiol 2020; 235:8972-8982. [DOI: 10.1002/jcp.29824] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2020] [Accepted: 05/18/2020] [Indexed: 01/01/2023]
Affiliation(s)
- Saeed Dorgaleleh
- Student Research Committee Golestan University of Medical Sciences Gorgan Iran
| | - Karim Naghipoor
- Student Research Committee Golestan University of Medical Sciences Gorgan Iran
| | - Ahmad Barahouie
- Student Research Committee Golestan University of Medical Sciences Gorgan Iran
| | - Farzad Dastaviz
- Student Research Committee Golestan University of Medical Sciences Gorgan Iran
| | - Morteza Oladnabi
- Gorgan Congenital Malformations Research Center, Golestan University of Medical Sciences Gorgan Iran
- Stem Cell Research Center, Golestan University of Medical Sciences Gorgan Iran
- Department of Medical Genetics, School of Advanced Technologies in Medicine Ischemic Disorders Research Center, Golestan University of Medical Sciences Gorgan Iran
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Vučinić N, Tubbs RS, Erić M, Vujić Z, Marić D, Vuković B. What Do We Find Attractive about the Face?: Survey Study with Application to Aesthetic Surgery. Clin Anat 2019; 33:214-222. [PMID: 31444926 DOI: 10.1002/ca.23455] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2019] [Revised: 08/20/2019] [Accepted: 08/21/2019] [Indexed: 02/06/2023]
Abstract
The appearance of the face is one of the most important factors influencing our perception of beauty. However, few studies have attempted to quantitate what one perceives as beauty. Therefore, this study was conducted with the goal of providing physicians with anatomical data that demonstrate which facial traits most influence our perception of one's attractiveness. In the first phase of the study, faces of 60 participants (30 males and 30 females) were photographed. Next, the photographs were shown to another group of 120 study members (60 males and 60 females), who evaluated the facial features using a Visual Analogue Scale. The highest rated facial parts were then measured using the ImageJ program. In men, the most attractive parts of the face were Type 1:2 lips, a Type IV nose of medium width, blue eyes, brown hair, and a very narrow face. Among females, the most attractive parts of the face were Type 2:1 lips, Type III and V noses of medium width, dark brown eyes, blonde hair, and a narrow face. This is the first study in which the most aesthetically important facial parts have been comprehensively examined. The results obtained in our study show a higher degree of representativeness compared to other studies due to a different methodological approach and can be used as an aesthetic guide and can help in the planning of aesthetic surgery such as lip augmentation and rhinoplasty. Clin. Anat. 33:214-222, 2020. © 2019 Wiley Periodicals, Inc.
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Affiliation(s)
- Nikola Vučinić
- Department of Anatomy, Faculty of Medicine, University of Novi Sad, Novi Sad, Serbia
| | - R Shane Tubbs
- Pediatric Neurosurgery, Children's of Alabama, Birmingham, Alabama
| | - Mirela Erić
- Department of Anatomy, Faculty of Medicine, University of Novi Sad, Novi Sad, Serbia
| | - Zorica Vujić
- Department of Pharmaceutical Chemistry, Faculty of Pharmacy, University of Belgrade, Belgrade, Serbia
| | - Dušica Marić
- Department of Anatomy, Faculty of Medicine, University of Novi Sad, Novi Sad, Serbia
| | - Boris Vuković
- Faculty of Medicine, University of Novi Sad, Novi Sad, Serbia
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Jang H, Yoon J, Kim YJ, Park Y. Classification of Iris Colors and Patterns in Koreans. Healthc Inform Res 2018; 24:227-235. [PMID: 30109155 PMCID: PMC6085209 DOI: 10.4258/hir.2018.24.3.227] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/13/2018] [Revised: 07/15/2018] [Accepted: 07/19/2018] [Indexed: 12/01/2022] Open
Abstract
Objectives The iris is the part of the eye that is colored, and it is an important feature in making an artificial eye. To address the lack of information about the brown Korean irises, we classified the colors and patterns of the irises of 100 Korean eyes. Methods The iris colors were extracted from 100 different digital photographs of each eye using K-mean clustering image analysis. The RGB data of the extracted colors were converted to CIELAB color space data and analyzed to determine the representative color of the iris in each photograph. The color differences were calculated to form groups of similar colors by matching the 100 samples into several groups with minimum color differences among them. The average hue value for each group was calculated, and the corresponding representative color was selected from 2 to 3 colors in one group. Results The iris colors were classified into seven brown color groups with 2 to 3 colors in each group. The coloration of Koreans' eyes appears to vary in a similar hue with differences in chroma and lightness. In addition, the iris patterns were classified into three basic patterns, namely, crown, sunshine, and flower, as well as three complex patterns that are mixtures of two basic patterns. Conclusions We classified Korean iris colors and patterns for application in the design of artificial eyes.
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Affiliation(s)
- HyeJung Jang
- Department of Clinical Trials for Medical Devices, Yonsei University Health System Severance Hospital, Seoul, Korea
| | - JinSook Yoon
- Department of Ophthalmology, Yonsei University Health System Severance Hospital, Seoul, Korea
| | - Yoon-Jung Kim
- Ewha Color Design Institute, Ewha Womans University, Seoul, Korea
| | - YungKyung Park
- Department of Design, Ewha Womans University, Seoul, Korea
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Tomar M, Dhiman R, Sharma G, Yadav N. Artistic Iris: A Case of Congenital Sectoral Heterochromia Iridis. J Ophthalmic Vis Res 2018; 13:359-360. [PMID: 30090196 PMCID: PMC6058536 DOI: 10.4103/jovr.jovr_91_17] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/04/2022] Open
Affiliation(s)
- Mandeep Tomar
- Department of Ophthalmology, Dr. RPGMC, Tanda, Kangra, Himachal Pradesh, India
| | - Richa Dhiman
- Department of Ophthalmology, Dr. RPGMC, Tanda, Kangra, Himachal Pradesh, India
| | - Gaurav Sharma
- Department of Ophthalmology, Dr. RPGMC, Tanda, Kangra, Himachal Pradesh, India
| | - Nishita Yadav
- Department of Ophthalmology, Dr. RPGMC, Tanda, Kangra, Himachal Pradesh, India
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Two Variants in SLC24A5 Are Associated with "Tiger-Eye" Iris Pigmentation in Puerto Rican Paso Fino Horses. G3-GENES GENOMES GENETICS 2017; 7:2799-2806. [PMID: 28655738 PMCID: PMC5555483 DOI: 10.1534/g3.117.043786] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
A unique eye color, called tiger-eye, segregates in the Puerto Rican Paso Fino (PRPF) horse breed and is characterized by a bright yellow, amber, or orange iris. Pedigree analysis identified a simple autosomal recessive mode of inheritance for this trait. A genome-wide association study (GWAS) with 24 individuals identified a locus on ECA 1 reaching genome-wide significance (Pcorrected = 1.32 × 10−5). This ECA1 locus harbors the candidate gene, Solute Carrier Family 24 (Sodium/Potassium/Calcium Exchanger), Member 5 (SLC24A5), with known roles in pigmentation in humans, mice, and zebrafish. Humans with compound heterozygous mutations in SLC24A5 have oculocutaneous albinism (OCA) type 6 (OCA6), which is characterized by dilute skin, hair, and eye pigmentation, as well as ocular anomalies. Twenty tiger-eye horses were homozygous for a nonsynonymous mutation in exon 2 (p.Phe91Tyr) of SLC24A5 (called here Tiger-eye 1), which is predicted to be deleterious to protein function. Additionally, eight of the remaining 12 tiger-eye horses heterozygous for the p.Phe91Tyr variant were also heterozygous for a 628 bp deletion encompassing all of exon 7 of SLC24A5 (c.875-340_1081+82del), which we will call here the Tiger-eye 2 allele. None of the 122 brown-eyed horses were homozygous for either tiger-eye-associated allele or were compound heterozygotes. Further, neither variant was detected in 196 horses from four related breeds not known to have the tiger-eye phenotype. Here, we propose that two mutations in SLC24A5 affect iris pigmentation in tiger-eye PRPF horses. Further, unlike OCA6 in humans, the Tiger-eye 1 mutation in its homozygous state or as a compound heterozygote (Tiger-eye 1/Tiger-eye 2) does not appear to cause ocular anomalies or a change in coat color in the PRPF horse.
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Zucca FA, Segura-Aguilar J, Ferrari E, Muñoz P, Paris I, Sulzer D, Sarna T, Casella L, Zecca L. Interactions of iron, dopamine and neuromelanin pathways in brain aging and Parkinson's disease. Prog Neurobiol 2017; 155:96-119. [PMID: 26455458 PMCID: PMC4826627 DOI: 10.1016/j.pneurobio.2015.09.012] [Citation(s) in RCA: 403] [Impact Index Per Article: 57.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/13/2015] [Revised: 09/14/2015] [Accepted: 09/17/2015] [Indexed: 12/11/2022]
Abstract
There are several interrelated mechanisms involving iron, dopamine, and neuromelanin in neurons. Neuromelanin accumulates during aging and is the catecholamine-derived pigment of the dopamine neurons of the substantia nigra and norepinephrine neurons of the locus coeruleus, the two neuronal populations most targeted in Parkinson's disease. Many cellular redox reactions rely on iron, however an altered distribution of reactive iron is cytotoxic. In fact, increased levels of iron in the brain of Parkinson's disease patients are present. Dopamine accumulation can induce neuronal death; however, excess dopamine can be removed by converting it into a stable compound like neuromelanin, and this process rescues the cell. Interestingly, the main iron compound in dopamine and norepinephrine neurons is the neuromelanin-iron complex, since neuromelanin is an effective metal chelator. Neuromelanin serves to trap iron and provide neuronal protection from oxidative stress. This equilibrium between iron, dopamine, and neuromelanin is crucial for cell homeostasis and in some cellular circumstances can be disrupted. Indeed, when neuromelanin-containing organelles accumulate high load of toxins and iron during aging a neurodegenerative process can be triggered. In addition, neuromelanin released by degenerating neurons activates microglia and the latter cause neurons death with further release of neuromelanin, then starting a self-propelling mechanism of neuroinflammation and neurodegeneration. Considering the above issues, age-related accumulation of neuromelanin in dopamine neurons shows an interesting link between aging and neurodegeneration.
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Affiliation(s)
- Fabio A Zucca
- Institute of Biomedical Technologies, National Research Council of Italy, Segrate, Milan, Italy
| | - Juan Segura-Aguilar
- Faculty of Medicine, Molecular and Clinical Pharmacology, ICBM, University of Chile, Santiago, Chile
| | - Emanuele Ferrari
- Institute of Biomedical Technologies, National Research Council of Italy, Segrate, Milan, Italy
| | - Patricia Muñoz
- Faculty of Medicine, Molecular and Clinical Pharmacology, ICBM, University of Chile, Santiago, Chile
| | - Irmgard Paris
- Faculty of Medicine, Molecular and Clinical Pharmacology, ICBM, University of Chile, Santiago, Chile; Department of Basic Sciences, Faculty of Sciences, Santo Tomás University, Viña del Mar, Chile
| | - David Sulzer
- Department of Psychiatry, Columbia University Medical Center, New York, NY, USA; Department of Neurology, Columbia University Medical Center, New York, NY, USA; Department of Pharmacology, Columbia University Medical Center, New York, NY, USA
| | - Tadeusz Sarna
- Department of Biophysics, Faculty of Biochemistry, Biophysics and Biotechnology, Jagiellonian University, Krakow, Poland
| | - Luigi Casella
- Department of Chemistry, University of Pavia, Pavia, Italy
| | - Luigi Zecca
- Institute of Biomedical Technologies, National Research Council of Italy, Segrate, Milan, Italy.
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14
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Wollstein A, Walsh S, Liu F, Chakravarthy U, Rahu M, Seland JH, Soubrane G, Tomazzoli L, Topouzis F, Vingerling JR, Vioque J, Böhringer S, Fletcher AE, Kayser M. Novel quantitative pigmentation phenotyping enhances genetic association, epistasis, and prediction of human eye colour. Sci Rep 2017; 7:43359. [PMID: 28240252 PMCID: PMC5327401 DOI: 10.1038/srep43359] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2016] [Accepted: 01/23/2017] [Indexed: 11/09/2022] Open
Abstract
Success of genetic association and the prediction of phenotypic traits from DNA are known to depend on the accuracy of phenotype characterization, amongst other parameters. To overcome limitations in the characterization of human iris pigmentation, we introduce a fully automated approach that specifies the areal proportions proposed to represent differing pigmentation types, such as pheomelanin, eumelanin, and non-pigmented areas within the iris. We demonstrate the utility of this approach using high-resolution digital eye imagery and genotype data from 12 selected SNPs from over 3000 European samples of seven populations that are part of the EUREYE study. In comparison to previous quantification approaches, (1) we achieved an overall improvement in eye colour phenotyping, which provides a better separation of manually defined eye colour categories. (2) Single nucleotide polymorphisms (SNPs) known to be involved in human eye colour variation showed stronger associations with our approach. (3) We found new and confirmed previously noted SNP-SNP interactions. (4) We increased SNP-based prediction accuracy of quantitative eye colour. Our findings exemplify that precise quantification using the perceived biological basis of pigmentation leads to enhanced genetic association and prediction of eye colour. We expect our approach to deliver new pigmentation genes when applied to genome-wide association testing.
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Affiliation(s)
- Andreas Wollstein
- Department of Genetic Identification, Erasmus MC University Medical Center Rotterdam, Rotterdam, The Netherlands.,Department of Medical Statistics and Bioinformatics, Leiden University Medical Center, Leiden, The Netherlands.,Section of Evolutionary Biology, Department of Biology II, University of Munich LMU, Planegg-Martinsried, Germany
| | - Susan Walsh
- Department of Genetic Identification, Erasmus MC University Medical Center Rotterdam, Rotterdam, The Netherlands.,Department of Biology, Indiana University-Purdue University Indianapolis, Indianapolis, IN, USA
| | - Fan Liu
- Department of Genetic Identification, Erasmus MC University Medical Center Rotterdam, Rotterdam, The Netherlands.,Key Laboratory of Genomic and Precision Medicine, Beijing Institute of Genomics, Chinese Academy of Sciences, Beijing, China
| | - Usha Chakravarthy
- Centre for Vision and Vascular Science, The Queen's University Belfast, Belfast, United Kingdom
| | - Mati Rahu
- Department of Epidemiology and Biostatistics, National Institute for Health Development, Tallinn, Estonia
| | - Johan H Seland
- Department of Ophthalmology, University of Bergen, School of Medicine, Bergen, Norway
| | - Gisèle Soubrane
- Clinique Ophthalmologique, Universitaire De Creteil, Paris, France
| | | | - Fotis Topouzis
- Department of Ophthalmology, Aristotle University of Thessaloniki, School of Medicine, Thessaloniki, Greece
| | - Johannes R Vingerling
- Department of Ophthalmology, Erasmus MC University Medical Centre Rotterdam, Rotterdam, The Netherlands
| | - Jesus Vioque
- Dpto. Salud Publica Universidad Miguel Hernandez, Alicante, El Centro de Investigacion Biomedica en Red de Epidemiologıa y Salud Publica (CIBERESP), Elche, Spain
| | - Stefan Böhringer
- Department of Medical Statistics and Bioinformatics, Leiden University Medical Center, Leiden, The Netherlands
| | - Astrid E Fletcher
- Faculty of Epidemiology &Population Health, London School of Hygiene &Tropical Medicine, London, United Kingdom
| | - Manfred Kayser
- Department of Genetic Identification, Erasmus MC University Medical Center Rotterdam, Rotterdam, The Netherlands
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15
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Ludwig CA, Callaway NF, Fredrick DR, Blumenkranz MS, Moshfeghi DM. What colour are newborns' eyes? Prevalence of iris colour in the Newborn Eye Screening Test (NEST) study. Acta Ophthalmol 2016; 94:485-8. [PMID: 27061128 DOI: 10.1111/aos.13006] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2015] [Accepted: 01/07/2016] [Indexed: 11/25/2022]
Abstract
PURPOSE This study aims to assess the birth prevalence of iris colour among newborns in a prospective, healthy, full-term newborn cohort. METHODS The Newborn Eye Screening Test (NEST) study is a prospective cohort study conducted at Lucile Packard Children's Hospital at Stanford University School of Medicine. A paediatric vitreoretinal specialist (DMM) reviewed images sent to the Byers Eye Institute telemedicine reading centre and recorded eye colour for every infant screened. Variables were graphed to assess for normality, and frequencies per subject were reported for eye colour, sex, ethnicity and race. RESULTS Among 192 subjects screened in the first year of the NEST study with external images of appropriate quality for visualization of the irides, the birth prevalence of iris colour was 63.0% brown, 20.8% blue, 5.7% green/hazel, 9.9% indeterminate and 0.5% partial heterochromia. The study population was derived from a quaternary care children's hospital. We report the birth prevalence of iris colour among full-term newborns in a diverse prospective cohort. CONCLUSION The study demonstrates a broad range of iris colour prevalence at birth with a predominance of brown iris coloration. Future studies with the NEST cohort will assess the change in iris colour over time and whether the frequencies of eye colour change as the child ages.
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Affiliation(s)
- Cassie A Ludwig
- Byers Eye Institute, Stanford University School of Medicine, Palo Alto, California, USA
| | - Natalia F Callaway
- Byers Eye Institute, Stanford University School of Medicine, Palo Alto, California, USA
| | - Douglas R Fredrick
- Byers Eye Institute, Stanford University School of Medicine, Palo Alto, California, USA
| | - Mark S Blumenkranz
- Byers Eye Institute, Stanford University School of Medicine, Palo Alto, California, USA
| | - Darius M Moshfeghi
- Byers Eye Institute, Stanford University School of Medicine, Palo Alto, California, USA
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16
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Polosa A, Bessaklia H, Lachapelle P. Strain Differences in Light-Induced Retinopathy. PLoS One 2016; 11:e0158082. [PMID: 27355622 PMCID: PMC4927188 DOI: 10.1371/journal.pone.0158082] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/24/2016] [Accepted: 06/09/2016] [Indexed: 11/18/2022] Open
Abstract
The purpose of this study was to better understand the role of ocular pigmentation and genetics in light-induced retinal damage. Adult pigmented [Long Evans (LE) and Brown Norway (BN)] and albino [Sprague Dawley (SD) and Lewis (LW)] rats were exposed to a bright cyclic light for 6 consecutive days and where compared with juvenile animals exposed to the same bright light environment from postnatal age 14 to 28. Flash ERGs and retinal histology were performed at predetermined days (D) post-light exposure. At D1, ERGs were similar in all adult groups with no recordable a-waves and residual b-waves. A transient recovery was noticed at D30 in the LW and LE only [b-wave: 18% and 25% of their original amplitude respectively]. Histology revealed that BN retina was the most damaged, while LE retina was best preserved. SD and LW rats were almost as damaged as BN rats. In contrast, the retina of juvenile BN was almost as resistant to the bright light exposure as that of juvenile LE rats. Our results strongly suggest that, although ocular pigmentation and genetic background are important factors in regulating the severity of light-induced retinal damage, the age of the animal at the onset of light exposure appears to be the most important determining factor.
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Affiliation(s)
- Anna Polosa
- Department of Neurology and Neurosurgery, McGill University, Montreal, Quebec, Canada
- Department of Ophthalmology, Research Institute of the McGill University Health Centre, Montreal, Quebec, Canada
| | - Hyba Bessaklia
- Department of Ophthalmology, Research Institute of the McGill University Health Centre, Montreal, Quebec, Canada
| | - Pierre Lachapelle
- Department of Neurology and Neurosurgery, McGill University, Montreal, Quebec, Canada
- Department of Ophthalmology, Research Institute of the McGill University Health Centre, Montreal, Quebec, Canada
- * E-mail:
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17
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Edwards M, Cha D, Krithika S, Johnson M, Cook G, Parra EJ. Iris pigmentation as a quantitative trait: variation in populations of European, East Asian and South Asian ancestry and association with candidate gene polymorphisms. Pigment Cell Melanoma Res 2015; 29:141-62. [DOI: 10.1111/pcmr.12435] [Citation(s) in RCA: 29] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/03/2015] [Accepted: 11/02/2015] [Indexed: 11/30/2022]
Affiliation(s)
- Melissa Edwards
- Department of Anthropology University of Toronto Mississauga Mississauga ON Canada
| | - David Cha
- Department of Anthropology University of Toronto Mississauga Mississauga ON Canada
| | - S. Krithika
- Department of Anthropology University of Toronto Mississauga Mississauga ON Canada
| | - Monique Johnson
- Department of Anthropology University of Toronto Mississauga Mississauga ON Canada
| | - Gillian Cook
- Department of Anthropology University of Toronto Mississauga Mississauga ON Canada
| | - Esteban J. Parra
- Department of Anthropology University of Toronto Mississauga Mississauga ON Canada
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18
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Greenberg JP, Duncker T, Woods RL, Smith RT, Sparrow JR, Delori FC. Quantitative fundus autofluorescence in healthy eyes. Invest Ophthalmol Vis Sci 2013; 54:5684-93. [PMID: 23860757 DOI: 10.1167/iovs.13-12445] [Citation(s) in RCA: 115] [Impact Index Per Article: 10.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022] Open
Abstract
PURPOSE Fundus autofluorescence was quantified (qAF) in subjects with healthy retinae using a standardized approach. The objective was to establish normative data and identify factors that influence the accumulation of RPE lipofuscin and/or modulate the observed AF signal in fundus images. METHODS AF images were acquired from 277 healthy subjects (age range: 5-60 years) by employing a Spectralis confocal scanning laser ophthalmoscope (cSLO; 488-nm excitation; 30°) equipped with an internal fluorescent reference. For each image, mean gray level was calculated as the average of eight preset regions, and was calibrated to the reference, zero-laser light, magnification, and optical media density from normative data on lens transmission spectra. Relationships between qAF and age, sex, race/ethnicity, eye color, refraction/axial length, and smoking status were evaluated as was measurement repeatability and the qAF spatial distribution. RESULTS qAF levels exhibited a significant increase with age. qAF increased with increasing eccentricity up to 10° to 15° from the fovea and was highest superotemporally. qAF values were significantly greater in females, and, compared with Hispanics, qAF was significantly higher in whites and lower in blacks and Asians. No associations with axial length and smoking were observed. For two operators, between-session repeatability was ± 9% and ± 12%. Agreement between the operators was ± 13%. CONCLUSIONS Normative qAF data are a reference tool essential to the interpretation of qAF measurements in ocular disease.
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Affiliation(s)
- Jonathan P Greenberg
- Department of Ophthalmology, Harkness Eye Institute, Columbia University, New York, New York, USA
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19
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Meyer WK, Zhang S, Hayakawa S, Imai H, Przeworski M. The convergent evolution of blue iris pigmentation in primates took distinct molecular paths. AMERICAN JOURNAL OF PHYSICAL ANTHROPOLOGY 2013; 151:398-407. [PMID: 23640739 PMCID: PMC3746105 DOI: 10.1002/ajpa.22280] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/03/2012] [Accepted: 03/24/2013] [Indexed: 12/18/2022]
Abstract
How many distinct molecular paths lead to the same phenotype? One approach to this question has been to examine the genetic basis of convergent traits, which likely evolved repeatedly under a shared selective pressure. We investigated the convergent phenotype of blue iris pigmentation, which has arisen independently in four primate lineages: humans, blue-eyed black lemurs, Japanese macaques, and spider monkeys. Characterizing the phenotype across these species, we found that the variation within the blue-eyed subsets of each species occupies strongly overlapping regions of CIE L*a*b* color space. Yet whereas Japanese macaques and humans display continuous variation, the phenotypes of blue-eyed black lemurs and their sister species (whose irises are brown) occupy more clustered subspaces. Variation in an enhancer of OCA2 is primarily responsible for the phenotypic difference between humans with blue and brown irises. In the orthologous region, we found no variant that distinguishes the two lemur species or associates with quantitative phenotypic variation in Japanese macaques. Given the high similarity between the blue iris phenotypes in these species and that in humans, this finding implies that evolution has used different molecular paths to reach the same end. Am J Phys Anthropol 151:398–407, 2013.© 2013 Wiley Periodicals, Inc.
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Affiliation(s)
- Wynn K Meyer
- Department of Human Genetics, University of Chicago, Chicago, IL 60637, USA.
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20
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Noonan FP, Zaidi MR, Wolnicka-Glubisz A, Anver MR, Bahn J, Wielgus A, Cadet J, Douki T, Mouret S, Tucker MA, Popratiloff A, Merlino G, De Fabo EC. Melanoma induction by ultraviolet A but not ultraviolet B radiation requires melanin pigment. Nat Commun 2012; 3:884. [PMID: 22673911 PMCID: PMC3621412 DOI: 10.1038/ncomms1893] [Citation(s) in RCA: 188] [Impact Index Per Article: 15.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2012] [Accepted: 05/08/2012] [Indexed: 11/09/2022] Open
Abstract
Malignant melanoma of the skin (CMM) is associated with ultraviolet radiation exposure, but the mechanisms and even the wavelengths responsible are unclear. Here we use a mammalian model to investigate melanoma formed in response to precise spectrally defined ultraviolet wavelengths and biologically relevant doses. We show that melanoma induction by ultraviolet A (320-400 nm) requires the presence of melanin pigment and is associated with oxidative DNA damage within melanocytes. In contrast, ultraviolet B radiation (280-320 nm) initiates melanoma in a pigment-independent manner associated with direct ultraviolet B DNA damage. Thus, we identified two ultraviolet wavelength-dependent pathways for the induction of CMM and describe an unexpected and significant role for melanin within the melanocyte in melanomagenesis.
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Affiliation(s)
- Frances P. Noonan
- Laboratory of Photobiology and Photoimmunology, Department of Microbiology, Immunology and Tropical Medicine, School of Medicine and Health Sciences, The George Washington University, Washington, District of Columbia 20037, USA
| | - M. Raza Zaidi
- Laboratory of Cancer Biology and Genetics, National Cancer Institute, NIH, Bethesda, Maryland 20892, USA
| | - Agnieszka Wolnicka-Glubisz
- Laboratory of Photobiology and Photoimmunology, Department of Microbiology, Immunology and Tropical Medicine, School of Medicine and Health Sciences, The George Washington University, Washington, District of Columbia 20037, USA
- Present address: Department of Biophysics, Faculty of Biochemistry, Biophysics and Biotechnology, Jagiellonian University, ul. Gronostajowa 7, Krakow 30-348, Poland (A.W.-G.)
| | - Miriam R. Anver
- Pathology/Histotechnology Laboratory, SAIC-Frederick, National Cancer Institute-Frederick, Frederick, Maryland 21702, USA
| | - Jesse Bahn
- Laboratory of Photobiology and Photoimmunology, Department of Microbiology, Immunology and Tropical Medicine, School of Medicine and Health Sciences, The George Washington University, Washington, District of Columbia 20037, USA
| | - Albert Wielgus
- Laboratory of Pharmacology, National Institute of Environmental Health Sciences, Research Triangle Park, North Carolina 27709, USA
- Present address: Duke Eye Center, 2351 Erwin Road, Durham, North Carolina 27705, USA (A.W.)
| | - Jean Cadet
- DSM/INAC/SCIB UMR-E 3 CEA/UJF FRE CNRS 3200/Laboratoire 'Lésions des Acides Nucléiques', CEA-Grenoble 38054, France
| | - Thierry Douki
- DSM/INAC/SCIB UMR-E 3 CEA/UJF FRE CNRS 3200/Laboratoire 'Lésions des Acides Nucléiques', CEA-Grenoble 38054, France
| | - Stephane Mouret
- DSM/INAC/SCIB UMR-E 3 CEA/UJF FRE CNRS 3200/Laboratoire 'Lésions des Acides Nucléiques', CEA-Grenoble 38054, France
- Present address: Department of Toxicology and Chemical Risk, Army Institute for Biomedical Research, La Tronche 38700, France (S.M.)
| | - Margaret A. Tucker
- Division of Cancer Epidemiology and Genetics, National Cancer Institute, NIH, Bethesda, Maryland 20892, USA
| | - Anastas Popratiloff
- Center for Microscopy and Image Analysis, Office of the Vice-President, The George Washington University, Washington, District of Columbia 20037, USA
| | - Glenn Merlino
- Laboratory of Cancer Biology and Genetics, National Cancer Institute, NIH, Bethesda, Maryland 20892, USA
| | - Edward C. De Fabo
- Laboratory of Photobiology and Photoimmunology, Department of Microbiology, Immunology and Tropical Medicine, School of Medicine and Health Sciences, The George Washington University, Washington, District of Columbia 20037, USA
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21
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Lagouvardos PE, Tsamali I, Papadopoulou C, Polyzois G. Tooth, skin, hair and eye colour interrelationships in Greek young adults. Odontology 2012; 101:75-83. [PMID: 22349932 DOI: 10.1007/s10266-012-0058-1] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/06/2011] [Accepted: 12/24/2011] [Indexed: 11/26/2022]
Abstract
The purpose of this study was to investigate the possible interrelationships of teeth, skin, eye and hair colour. A portable colorimeter (Shade Eye NCC/Shofu) was used to record the colour in the CIELAB system of the upper right incisors in 150 dental school students, along with their skin colour at three different areas. Natural hair and eye colour was classified into several categories by a trained examiner (ICC 0.93-0.99). One-way ANOVA and correlation tests were used to statistically analyse the data. Skin was found to have significantly higher L*, b* but lower a* values than teeth (p < 0.05). A significant correlation (p < 0.05) of teeth to skin L* and a*colour coordinate was found, but not to b* coordinate (p > 0.05). Hair tones were not correlated to teeth L* or b*, but only to a*coordinate. Teeth and eye colour coordinates were not correlated (p > 0.05). Eye and hair tones were found to have the highest significant correlation (ρ = 0.369). In conclusion, teeth of this cohort were found to be lighter, less red and yellow than the skin. Teeth colour was not related to eye colour, but lighter teeth were found to be associated with lighter skins, and redder lateral incisors to lighter hair. Darker facial skins or yellower forehead areas were also associated with darker hair and vice versa. The clinical relevance of the study is that the investigated facial characteristics are inter-correlated weakly to moderately, and for this reason predicting the colour parameters of one facial characteristic by another would not be accurate, but helpful for a rough colour selection as associations show.
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Affiliation(s)
- Panagiotis E Lagouvardos
- Department of Operative Dentistry, School of Dentistry, University of Athens, 2 Thivon Str, Athens, Greece.
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22
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Kayser M, Liu F, Janssens ACJ, Rivadeneira F, Lao O, van Duijn K, Vermeulen M, Arp P, Jhamai MM, van IJcken WF, den Dunnen JT, Heath S, Zelenika D, Despriet DD, Klaver CC, Vingerling JR, de Jong PT, Hofman A, Aulchenko YS, Uitterlinden AG, Oostra BA, van Duijn CM. Three genome-wide association studies and a linkage analysis identify HERC2 as a human iris color gene. Am J Hum Genet 2008; 82:411-23. [PMID: 18252221 DOI: 10.1016/j.ajhg.2007.10.003] [Citation(s) in RCA: 168] [Impact Index Per Article: 10.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2007] [Revised: 10/05/2007] [Accepted: 10/18/2007] [Indexed: 12/21/2022] Open
Abstract
Human iris color was one of the first traits for which Mendelian segregation was established. To date, the genetics of iris color is still not fully understood and is of interest, particularly in view of forensic applications. In three independent genome-wide association (GWA) studies of a total of 1406 persons and a genome-wide linkage study of 1292 relatives, all from the Netherlands, we found that the 15q13.1 region is the predominant region involved in human iris color. There were no other regions showing consistent genome-wide evidence for association and linkage to iris color. Single nucleotide polymorphisms (SNPs) in the HERC2 gene and, to a lesser extent, in the neighboring OCA2 gene were independently associated to iris color variation. OCA2 has been implicated in iris color previously. A replication study within two populations confirmed that the HERC2 gene is a new and significant determinant of human iris color variation, in addition to OCA2. Furthermore, HERC2 rs916977 showed a clinal allele distribution across 23 European populations, which was significantly correlated to iris color variation. We suggest that genetic variants regulating expression of the OCA2 gene exist in the HERC2 gene or, alternatively, within the 11.7 kb of sequence between OCA2 and HERC2, and that most iris color variation in Europeans is explained by those two genes. Testing markers in the HERC2-OCA2 region may be useful in forensic applications to predict eye color phenotypes of unknown persons of European genetic origin.
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23
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Duffy DL, Montgomery GW, Chen W, Zhao ZZ, Le L, James MR, Hayward NK, Martin NG, Sturm RA. A three-single-nucleotide polymorphism haplotype in intron 1 of OCA2 explains most human eye-color variation. Am J Hum Genet 2007; 80:241-52. [PMID: 17236130 PMCID: PMC1785344 DOI: 10.1086/510885] [Citation(s) in RCA: 154] [Impact Index Per Article: 9.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2006] [Accepted: 11/15/2006] [Indexed: 01/30/2023] Open
Abstract
We have previously shown that a quantitative-trait locus linked to the OCA2 region of 15q accounts for 74% of variation in human eye color. We conducted additional genotyping to clarify the role of the OCA2 locus in the inheritance of eye color and other pigmentary traits associated with skin-cancer risk in white populations. Fifty-eight synonymous and nonsynonymous exonic single-nucleotide polymorphisms (SNPs) and tagging SNPs were typed in a collection of 3,839 adolescent twins, their siblings, and their parents. The highest association for blue/nonblue eye color was found with three OCA2 SNPs: rs7495174 T/C, rs6497268 G/T, and rs11855019 T/C (P values of 1.02x10(-61), 1.57x10(-96), and 4.45x10(-54), respectively) in intron 1. These three SNPs are in one major haplotype block, with TGT representing 78.4% of alleles. The TGT/TGT diplotype found in 62.2% of samples was the major genotype seen to modify eye color, with a frequency of 0.905 in blue or green compared with only 0.095 in brown eye color. This genotype was also at highest frequency in subjects with light brown hair and was more frequent in fair and medium skin types, consistent with the TGT haplotype acting as a recessive modifier of lighter pigmentary phenotypes. Homozygotes for rs11855019 C/C were predominantly without freckles and had lower mole counts. The minor population impact of the nonsynonymous coding-region polymorphisms Arg305Trp and Arg419Gln associated with nonblue eyes and the tight linkage of the major TGT haplotype within the intron 1 of OCA2 with blue eye color and lighter hair and skin tones suggest that differences within the 5' proximal regulatory control region of the OCA2 gene alter expression or messenger RNA-transcript levels and may be responsible for these associations.
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Affiliation(s)
- David L Duffy
- Queensland Institute of Medical Research, Brisbane, Australia
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