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McPolin MC, Kranabetter JM, Philpott TJ, Hawkins BJ. Sporocarp nutrition of ectomycorrhizal fungi indicates an important role for endemic species in a high productivity temperate rainforest. THE NEW PHYTOLOGIST 2024; 242:1603-1613. [PMID: 37771241 DOI: 10.1111/nph.19280] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/09/2023] [Accepted: 09/04/2023] [Indexed: 09/30/2023]
Abstract
Endemic species of ectomycorrhizal fungi (EMF) are found throughout many biomes, but it is unclear whether their localized distribution is dictated by habitat filtering or geographical barriers to dispersal. We examined community composition (via long-read metabarcoding) and differences in sporocarp nutrition between endemic and cosmopolitan EMF species across perhumid temperate rainforests of British Columbia, characterized by soils with high nitrogen (N) supply alongside low phosphorus (P) and cation availability. Endemic EMF species, representing almost half of the community, had significantly greater sporocarp N (24% higher), potassium (+16%), and magnesium (+17%) concentrations than cosmopolitan species. Sporocarp P concentrations were comparatively low and did not differ by fungal range. However, sporocarp N% and P% were well correlated, supporting evidence for linkages in N and P acquisition. Endemics were more likely to occur on Tsuga heterophylla (a disjunct host genus) than Picea sitchensis (a circumpolar genus). The Inocybaceae and Thelephoraceae families had high proportions of endemic taxa, while species in Cortinariaceae were largely cosmopolitan, indicating some niche conservatism among genera. We conclude that superior adaptive traits in relation to perhumid soils were skewed toward the endemic community, underscoring the potentially important contribution of these localized fungi to rainforest nutrition and productivity.
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Affiliation(s)
- M Claire McPolin
- Centre for Forest Biology, University of Victoria, PO Box 3020, STN CSC, Victoria, BC, V8W 3N5, Canada
| | - J Marty Kranabetter
- British Columbia Ministry of Forests, PO Box 9536, Stn Prov Govt, Victoria, BC, V8W 9C4, Canada
| | - Tim J Philpott
- British Columbia Ministry of Forests, 200-640 Borland St., Williams Lake, BC, V2G 4T1, Canada
| | - Barbara J Hawkins
- Centre for Forest Biology, University of Victoria, PO Box 3020, STN CSC, Victoria, BC, V8W 3N5, Canada
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Kranabetter JM, Robbins S, Hawkins BJ. Host population effects on ectomycorrhizal fungi vary between low and high phosphorus soils of temperate rainforests. MYCORRHIZA 2023; 33:199-209. [PMID: 36947254 DOI: 10.1007/s00572-023-01109-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/07/2022] [Accepted: 03/13/2023] [Indexed: 06/08/2023]
Abstract
Geographic distinctions in the affinity of tree populations for select ectomycorrhizal fungi (EMF) may occur where strong edaphic pressures act on fungal communities and their hosts. We examine this premise for Pseudotsuga menziesii var. menziesii of southwest British Columbia, using ten native seedlots collected from a range of mean annual precipitation (MAP), as a proxy for podzolization extent and phosphorus (P) deficiencies, and evaluated in contrasting low P and high P soils. After two growing seasons, seedling biomass in the high P soil dwarfed that of the low P soil, and better growth rates under high P were detected for populations from very dry and very wet origins. EMF communities on the high P soil displayed more symmetry among host populations than the low P soil (average community dissimilarity of 0.20% vs. 0.39%, respectively). Seedling foliar P% differed slightly but significantly in relation to MAP of origin. EMF species richness varied significantly among host populations but independently of climatic parameters. There were significant shifts in EMF species abundance related to seedlot MAP, particularly on the low P soil where nonlinear relationships were found for Wilcoxina mikolae, Hyaloscypha finlandica, and Rhizopogon villosulus. Despite efforts to enhance colonization by native fungi, the predominance of ruderal EMF species hindered a realistic evaluation of local adaptation among host-fungi populations. Nevertheless, the shifting affinity in taxa abundance and wider community disparity on low P soil reflected the potential for a consequential host genetic effect related to geographical patterns in P availability across temperate rainforests.
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Affiliation(s)
- J M Kranabetter
- British Columbia Ministry of Forests, P.O. Box 9536, Stn Prov Govt, Victoria, B.C., Canada, V8W 9C4.
| | - S Robbins
- Centre for Forest Biology, University of Victoria, P.O. Box 3020, STN CSC, Victoria, B.C., Canada, V8W 3N5
| | - B J Hawkins
- Centre for Forest Biology, University of Victoria, P.O. Box 3020, STN CSC, Victoria, B.C., Canada, V8W 3N5
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Khokon AM, Janz D, Polle A. Ectomycorrhizal diversity, taxon-specific traits and root N uptake in temperate beech forests. THE NEW PHYTOLOGIST 2023. [PMID: 37229659 DOI: 10.1111/nph.18978] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/16/2022] [Accepted: 04/19/2023] [Indexed: 05/27/2023]
Abstract
Roots of forest trees are colonized by a diverse spectrum of ectomycorrhizal (EM) fungal species differing in their nitrogen (N) acquisition abilities. Here, we hypothesized that root N gain is the result of EM fungal diversity or related to taxon-specific traits for N uptake. To test our hypotheses, we traced 15 N enrichment in fine roots, coarse roots and taxon-specific ectomycorrhizas in temperate beech forests in two regions and three seasons, feeding 1 mM NH4 NO3 labelled with either 15 NH4 + or 15 NO3 - . We morphotyped > 45 000 vital root tips and identified 51 of 53 detected EM species by sequencing. EM root tips exhibited strong, fungal taxon-specific variation in 15 N enrichment with higher NH4 + than NO3 - enrichment. The translocation of N into the upper parts of the root system increased with increasing EM fungal diversity. Across the growth season, influential EM species predicting root N gain were not identified, probably due to high temporal dynamics of the species composition of EM assemblages. Our results support that root N acquisition is related to EM fungal community-level traits and highlight the importance of EM diversity for tree N nutrition.
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Affiliation(s)
- Anis Mahmud Khokon
- Forest Botany and Tree Physiology, University of Göttingen, Göttingen, 37077, Germany
- Functional Forest Ecology, Universität Hamburg, Barsbüttel, 22885, Germany
| | - Dennis Janz
- Forest Botany and Tree Physiology, University of Göttingen, Göttingen, 37077, Germany
| | - Andrea Polle
- Forest Botany and Tree Physiology, University of Göttingen, Göttingen, 37077, Germany
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van Galen LG, Orlovich DA, Lord JM, Nilsen AR, Dutoit L, Larcombe MJ. Correlated evolution in an ectomycorrhizal host-symbiont system. THE NEW PHYTOLOGIST 2023; 238:1215-1229. [PMID: 36751898 DOI: 10.1111/nph.18802] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/06/2022] [Accepted: 01/30/2023] [Indexed: 06/18/2023]
Abstract
Mechanisms of diversification in fungi are relatively poorly known. Many ectomycorrhizal symbionts show preference for particular host genera or families, so host-symbiont selection may be an important driver of fungal diversification in ectomycorrhizal systems. However, whether ectomycorrhizal hosts and symbionts show correlated evolutionary patterns remains untested, and it is unknown whether fungal specialisation also occurs in systems dominated by hosts from the same genus. We use metabarcoding of ectomycorrhizal fungi collected with hyphal ingrowth bags from Nothofagus forests across southern New Zealand to investigate host-symbiont specialisation and correlated evolution. We examine how ectomycorrhizal communities differ between host species and look for patterns of host-symbiont cophylogeny. We found substantial differences in ectomycorrhizal communities associated with different host taxa, particularly between hosts from different subgenera (Lophozonia and Fuscospora), but also between more closely related hosts. Twenty-four per cent of fungal taxa tested showed affiliations to particular hosts, and tests for cophylogeny revealed significant correlations between host relatedness and the fungal phylogeny that extended to substantial evolutionary depth. These results provide new evidence of correlated evolution in ectomycorrhizal systems, indicating that preferences among closely related host species may represent an important evolutionary driver for local lineage diversification in ectomycorrhizal fungi.
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Affiliation(s)
- Laura G van Galen
- Department of Botany, University of Otago, PO Box 56, Dunedin, 9054, New Zealand
| | - David A Orlovich
- Department of Botany, University of Otago, PO Box 56, Dunedin, 9054, New Zealand
| | - Janice M Lord
- Department of Botany, University of Otago, PO Box 56, Dunedin, 9054, New Zealand
| | - Andy R Nilsen
- Department of Botany, University of Otago, PO Box 56, Dunedin, 9054, New Zealand
| | - Ludovic Dutoit
- Department of Zoology, University of Otago, PO Box 56, Dunedin, 9054, New Zealand
| | - Matthew J Larcombe
- Department of Botany, University of Otago, PO Box 56, Dunedin, 9054, New Zealand
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Zhang Y, Wang Q, Xu L, Ma S, Cui D, Zhu K, Feng W. Mixed conifer-broadleaf trees on arbuscular mycorrhizal and ectomycorrhizal communities in rhizosphere soil of different plantation stands in the temperate zone, Northeast China. Front Microbiol 2022; 13:986515. [PMID: 36238594 PMCID: PMC9551461 DOI: 10.3389/fmicb.2022.986515] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2022] [Accepted: 09/09/2022] [Indexed: 12/03/2022] Open
Abstract
In comparison with ectomycorrhizal (EM) tree species, arbuscular mycorrhizal (AM) trees have different litter quality and nitrogen cycle modes, which may affect mycorrhizal colonization and the community composition and diversity. However, available studies addressing the mycorrhizal fungal colonization rate, diversity and community composition in mixed forest stands composed of AM and EM trees are rare. In the present study, we assessed litter quality, soil physicochemical properties and correlated them with mycorrhizal community characteristics in rhizosphere soils of monoculture and mixture plantation stands of AM tree species (Fraxinus mandschurica Rupr.) and EM tree species (Larix gmelinii Rupr., Picea koraiensis Nakai) in Northeast China. We hypothesized that (1) the effect of mixture pattern on mycorrhizal colonization rate and diversity would change with tree species, (2) the effect of mixture pattern on mycorrhizal community composition would be less pronounced in comparison with that of tree species. We found that mixture did not change AMF colonization rate regardless of mixture identity, whereas mixture and tree species exerted significant effects on EMF colonization rate. For AMF community, both M-AS (Fraxinus mandschurica Rupr. and Picea koraiensis Nakai) and M-AL (Fraxinus mandschurica Rupr. and Larix gmelinii Rupr.) mixtures significantly increased Pielou index and Simpson index, whereas only M-AS significantly increased Sobs. For EMF community, mixture significantly affected examined diversity indices except for Chao1. Mixture significantly shifted AMF and EMF community, and the magnitude was tree species dependent. The dominant genera in AMF and EMF communities in plantation stands were Glomus and Tomentella, respectively. The EnvFit analysis showed that the determinant factors of EMF community are soil moisture, pH, nitrate nitrogen content, dissolved organic nitrogen content, soil organic matter content, soil organic carbon/total nitrogen and litter carbon/total nitrogen. In conclusion, mixed conifer-broadleaf trees significantly changed soil physicochemical properties, litter quality as well as mycorrhizal fungi community diversity and composition.
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Unipartite and bipartite mycorrhizal networks of Abies religiosa forests: Incorporating network theory into applied ecology of conifer species and forest management. ECOLOGICAL COMPLEXITY 2022. [DOI: 10.1016/j.ecocom.2022.101002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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Rivera Pérez CA, Janz D, Schneider D, Daniel R, Polle A. Transcriptional Landscape of Ectomycorrhizal Fungi and Their Host Provides Insight into N Uptake from Forest Soil. mSystems 2022; 7:e0095721. [PMID: 35089084 PMCID: PMC8725588 DOI: 10.1128/msystems.00957-21] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2021] [Accepted: 11/29/2021] [Indexed: 01/05/2023] Open
Abstract
Mineral nitrogen (N) is a major nutrient showing strong fluctuations in the environment due to anthropogenic activities. The acquisition and translocation of N to forest trees are achieved mainly by highly diverse ectomycorrhizal fungi (EMF) living in symbioses with their host roots. Here, we examined colonized root tips to characterize the entire root-associated fungal community by DNA metabarcoding-Illumina sequencing of the fungal internal transcribed spacer 2 (ITS2) molecular marker and used RNA sequencing to target metabolically active fungi and the plant transcriptome after N application. The study was conducted with beech (Fagus sylvatica L.), a dominant tree species in central Europe, grown in native forest soil. We demonstrate strong enrichment of 15N from nitrate or ammonium in the ectomycorrhizal roots by stable-isotope labeling. The relative abundance of the EMF members in the fungal community was correlated with their transcriptional abundances. The fungal metatranscriptome covered Kyoto Encyclopedia of Genes and Genomes (KEGG) and Eukaryotic Orthologous Groups (KOG) categories similar to those of model fungi and did not reveal significant changes related to N metabolization but revealed species-specific transcription patterns, supporting trait stability. In contrast to the resistance of the fungal metatranscriptome, the transcriptome of the host exhibited dedicated nitrate- or ammonium-responsive changes with the upregulation of transporters and enzymes required for nitrate reduction and a drastic enhancement of glutamine synthetase transcript levels, indicating the channeling of ammonium into the pathway for plant protein biosynthesis. Our results support that naturally assembled fungal communities living in association with the tree roots buffer nutritional signals in their own metabolism but do not shield plants from high environmental N levels. IMPORTANCE Although EMF are well known for their role in supporting tree N nutrition, the molecular mechanisms underlying N flux from the soil solution into the host through the ectomycorrhizal pathway remain widely unknown. Furthermore, ammonium and nitrate availability in the soil solution is subject to frequent oscillations that create a dynamic environment for the tree roots and associated microbes during N acquisition. Therefore, it is important to understand how root-associated mycobiomes and the tree roots handle these fluctuations. We studied the responses of the symbiotic partners by screening their transcriptomes after a sudden environmental flux of nitrate or ammonium. We show that the fungi and the host respond asynchronously, with the fungi displaying resistance to increased nitrate or ammonium and the host dynamically metabolizing the supplied N sources. This study provides insights into the molecular mechanisms of the symbiotic partners operating under N enrichment in a multidimensional symbiotic system.
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Affiliation(s)
- Carmen Alicia Rivera Pérez
- Forest Botany and Tree Physiology, Büsgen Institute, Georg-August University of Göttingen, Göttingen, Germany
| | - Dennis Janz
- Forest Botany and Tree Physiology, Büsgen Institute, Georg-August University of Göttingen, Göttingen, Germany
| | - Dominik Schneider
- Department of Genomic and Applied Microbiology, Institute of Microbiology and Genetics, Georg-August University of Göttingen, Göttingen, Germany
- Göttingen Genomics Laboratory, Institute of Microbiology and Genetics, Georg-August University of Göttingen, Göttingen, Germany
| | - Rolf Daniel
- Department of Genomic and Applied Microbiology, Institute of Microbiology and Genetics, Georg-August University of Göttingen, Göttingen, Germany
- Göttingen Genomics Laboratory, Institute of Microbiology and Genetics, Georg-August University of Göttingen, Göttingen, Germany
| | - Andrea Polle
- Forest Botany and Tree Physiology, Büsgen Institute, Georg-August University of Göttingen, Göttingen, Germany
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Pellitier PT, Zak DR. Ectomycorrhizal fungal decay traits along a soil nitrogen gradient. THE NEW PHYTOLOGIST 2021; 232:2152-2164. [PMID: 34533216 DOI: 10.1111/nph.17734] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/18/2021] [Accepted: 08/16/2021] [Indexed: 06/13/2023]
Abstract
The extent to which ectomycorrhizal (ECM) fungi decay soil organic matter (SOM) has implications for accurately predicting forest ecosystem response to climate change. Investigating the distribution of gene traits associated with SOM decay among ectomycorrhizal fungal communities could improve understanding of SOM dynamics and plant nutrition. We hypothesized that soil inorganic nitrogen (N) availability structures the distribution of ECM fungal genes associated with SOM decay and, specifically, that ECM fungal communities occurring in inorganic N-poor soils have greater SOM decay potential. To test this hypothesis, we paired amplicon and shotgun metagenomic sequencing of 60 ECM fungal communities associating with Quercus rubra along a natural soil inorganic N gradient. Ectomycorrhizal fungal communities occurring in low inorganic N soils were enriched in gene families involved in the decay of lignin, cellulose, and chitin. Ectomycorrhizal fungal community composition was the strongest driver of shifts in metagenomic estimates of fungal decay potential. Our study simultaneously illuminates the identity of key ECM fungal taxa and gene families potentially involved in the decay of SOM, and we link rhizomorphic and medium-distance hyphal morphologies with enhanced SOM decay potential. Coupled shifts in ECM fungal community composition and community-level decay gene frequencies are consistent with outcomes of trait-mediated community assembly processes.
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Affiliation(s)
- Peter T Pellitier
- School for Environment and Sustainability, University of Michigan, Ann Arbor, MI, 48109, USA
| | - Donald R Zak
- School for Environment and Sustainability, University of Michigan, Ann Arbor, MI, 48109, USA
- Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, MI, 48109, USA
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Pellitier PT, Zak DR, Argiroff WA, Upchurch RA. Coupled Shifts in Ectomycorrhizal Communities and Plant Uptake of Organic Nitrogen Along a Soil Gradient: An Isotopic Perspective. Ecosystems 2021. [DOI: 10.1007/s10021-021-00628-6] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
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10
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McPolin MC, Kranabetter JM. Influence of endemic versus cosmopolitan species on the local assembly of ectomycorrhizal fungal communities. THE NEW PHYTOLOGIST 2021; 229:2395-2399. [PMID: 33091170 DOI: 10.1111/nph.17015] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/17/2020] [Accepted: 10/13/2020] [Indexed: 06/11/2023]
Affiliation(s)
- M Claire McPolin
- Centre for Forest Biology, PO Box 3020, STN CSC, Victoria, BC, V8W 3N5, Canada
| | - J Marty Kranabetter
- British Columbia Ministry of Forests, Lands, Natural Resource Operations and Rural Development, PO Box 9536, Stn Prov Govt, Victoria, BC, V8W 9C4, Canada
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Meeds JA, Marty Kranabetter J, Zigg I, Dunn D, Miros F, Shipley P, Jones MD. Phosphorus deficiencies invoke optimal allocation of exoenzymes by ectomycorrhizas. ISME JOURNAL 2021; 15:1478-1489. [PMID: 33420298 PMCID: PMC8114911 DOI: 10.1038/s41396-020-00864-z] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/19/2020] [Revised: 11/20/2020] [Accepted: 11/30/2020] [Indexed: 11/09/2022]
Abstract
Ectomycorrhizal (EM) fungi can acquire phosphorus (P) through the production of extracellular hydrolytic enzymes (exoenzymes), but it is unclear as to the manner and extent native EM fungal communities respond to declining soil P availability. We examined the activity of six exoenzymes (xylosidase, N-acetyl glucosaminidase, β-glucosidase, acid phosphomonoesterase, acid phosphodiesterase [APD], laccase) from EM roots of Pseudotsuga menzesii across a soil podzolization gradient of coastal British Columbia. We found that APD activity increased fourfold in a curvilinear association with declining inorganic P. Exoenzyme activity was not related to organic P content, but at a finer resolution using 31P-NMR, there was a strong positive relationship between APD activity and the ratio of phosphodiesters to orthophosphate of surface organic horizons (forest floors). Substantial increases (two- to fivefold) in most exoenzymes were aligned with declining foliar P concentrations of P. menzesii, but responses were statistically better in relation to foliar nitrogen (N):P ratios. EM fungal species with consistently high production of key exoenzymes were exclusive to Podzol plots. Phosphorus deficiencies in relation to N limitations may provide the best predictor of exoenzyme investment, reflecting an optimal allocation strategy for EM fungi. Resource constraints contribute to species turnover and the assembly of distinct, well-adapted EM fungal communities.
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Affiliation(s)
- Justin A Meeds
- Biology Department, University of British Columbia, Okanagan Campus 1177 Research Road, Kelowna, BC, V4V 1V7, Canada
| | - J Marty Kranabetter
- British Columbia Ministry of Forests, Lands and Natural Resource Operations, P.O. Box 9536, Stn Prov Govt, Victoria, BC, V8W 9C4, Canada.
| | - Ieva Zigg
- Biology Department, University of British Columbia, Okanagan Campus 1177 Research Road, Kelowna, BC, V4V 1V7, Canada.,Chemistry Department, University of British Columbia, Okanagan Campus 3187 University Way, Kelowna, BC, V4V 1V7, Canada
| | - Dave Dunn
- Natural Resources Canada, Pacific Forestry Centre, 506 Burnside Road West, Victoria, BC, V8Z 1M5, Canada
| | - François Miros
- Chemistry Department, University of British Columbia, Okanagan Campus 3187 University Way, Kelowna, BC, V4V 1V7, Canada
| | - Paul Shipley
- Chemistry Department, University of British Columbia, Okanagan Campus 3187 University Way, Kelowna, BC, V4V 1V7, Canada
| | - Melanie D Jones
- Biology Department, University of British Columbia, Okanagan Campus 1177 Research Road, Kelowna, BC, V4V 1V7, Canada
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Nguyen DQ, Schneider D, Brinkmann N, Song B, Janz D, Schöning I, Daniel R, Pena R, Polle A. Soil and root nutrient chemistry structure root-associated fungal assemblages in temperate forests. Environ Microbiol 2020; 22:3081-3095. [PMID: 32383336 DOI: 10.1111/1462-2920.15037] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2018] [Revised: 04/19/2020] [Accepted: 04/21/2020] [Indexed: 12/12/2022]
Abstract
Root-associated fungi (RAF) link nutrient fluxes between soil and roots and thus play important roles in ecosystem functioning. To enhance our understanding of the factors that control RAF, we fitted statistical models to explain variation in RAF community structure using data from 150 temperate forest sites covering a broad range of environmental conditions and chemical root traits. We found that variation in RAF communities was related to both root traits (e.g., cations, carbohydrates, NO3 - ) and soil properties (pH, cations, moisture, C/N). The identified drivers were the combined result of distinct response patterns of fungal taxa (determined at the rank of orders) to biotic and abiotic factors. Our results support that RAF community variation is related to evolutionary adaptedness of fungal lineages and consequently, drivers of RAF communities are context-dependent.
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Affiliation(s)
- Dung Quang Nguyen
- Forest Botany and Tree Physiology, Büsgen-Institut, University of Göttingen, Göttingen, Büsgenweg 2, 37077, Germany.,Forest Protection Research Centre, Vietnamese Academy of Forest Sciences, Duc Thang Ward, Bac Tu Liem District, Hanoi, Vietnam
| | - Dominik Schneider
- Genomic and Applied Microbiology and Göttingen Genomics Laboratory, Institute of Microbiology and Genetics, University of Göttingen, Göttingen, Grisebachstraße 8, 37077, Germany
| | - Nicole Brinkmann
- Forest Botany and Tree Physiology, Büsgen-Institut, University of Göttingen, Göttingen, Büsgenweg 2, 37077, Germany
| | - Bin Song
- Forest Botany and Tree Physiology, Büsgen-Institut, University of Göttingen, Göttingen, Büsgenweg 2, 37077, Germany
| | - Dennis Janz
- Forest Botany and Tree Physiology, Büsgen-Institut, University of Göttingen, Göttingen, Büsgenweg 2, 37077, Germany
| | - Ingo Schöning
- Biogeochemical Processes, Max Planck Institute for Biogeochemistry, Hans-Knöll-Str. 10, 07745 Jena, Germany
| | - Rolf Daniel
- Genomic and Applied Microbiology and Göttingen Genomics Laboratory, Institute of Microbiology and Genetics, University of Göttingen, Göttingen, Grisebachstraße 8, 37077, Germany
| | - Rodica Pena
- Forest Botany and Tree Physiology, Büsgen-Institut, University of Göttingen, Göttingen, Büsgenweg 2, 37077, Germany
| | - Andrea Polle
- Forest Botany and Tree Physiology, Büsgen-Institut, University of Göttingen, Göttingen, Büsgenweg 2, 37077, Germany
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13
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Guo J, Ling N, Chen Z, Xue C, Li L, Liu L, Gao L, Wang M, Ruan J, Guo S, Vandenkoornhuyse P, Shen Q. Soil fungal assemblage complexity is dependent on soil fertility and dominated by deterministic processes. THE NEW PHYTOLOGIST 2020; 226:232-243. [PMID: 31778576 DOI: 10.1111/nph.16345] [Citation(s) in RCA: 55] [Impact Index Per Article: 13.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/18/2019] [Accepted: 11/22/2019] [Indexed: 05/14/2023]
Abstract
In the processes controlling ecosystem fertility, fungi are increasingly acknowledged as key drivers. However, our understanding of the rules behind fungal community assembly regarding the effect of soil fertility level remains limited. Using soil samples from typical tea plantations spanning c. 2167 km north-east to south-west across China, we investigated the assemblage complexity and assembly processes of 140 fungal communities along a soil fertility gradient. The community dissimilarities of total fungi and fungal functional guilds increased with increasing soil fertility index dissimilarity. The symbiotrophs were more sensitive to variations in soil fertility compared with pathotrophs and saprotrophs. Fungal networks were larger and showed higher connectivity as well as greater potential for inter-module connection in more fertile soils. Environmental factors had a slightly greater influence on fungal community composition than spatial factors. Species abundance fitted the Zipf-Mandelbrot distribution (niche-based mechanisms), which provided evidence for deterministic-based processes. Overall, the soil fungal communities in tea plantations responded in a deterministic manner to soil fertility, with high fertility correlated with complex fungal community assemblages. This study provides new insights that might contribute to predictions of fungal community complexity.
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Affiliation(s)
- Junjie Guo
- Jiangsu Provincial Key Laboratory for Solid Organic Waste Utilization, Nanjing Agricultural University, Nanjing, 210095, China
| | - Ning Ling
- Jiangsu Provincial Key Laboratory for Solid Organic Waste Utilization, Nanjing Agricultural University, Nanjing, 210095, China
- UMR 6553 EcoBio, Universite de Rennes 1, CNRS, campus Beaulieu, Avenue du Général Leclerc, 35042, Rennes Cedex, France
| | - Zhaojie Chen
- Jiangsu Provincial Key Laboratory for Solid Organic Waste Utilization, Nanjing Agricultural University, Nanjing, 210095, China
| | - Chao Xue
- Jiangsu Provincial Key Laboratory for Solid Organic Waste Utilization, Nanjing Agricultural University, Nanjing, 210095, China
| | - Ling Li
- Jiangsu Provincial Key Laboratory for Solid Organic Waste Utilization, Nanjing Agricultural University, Nanjing, 210095, China
| | - Lisheng Liu
- Hengyang Red Soil Experimental Station, Chinese Academy of Agricultural Sciences, Hengyang, 421001, China
| | - Limin Gao
- Jiangsu Provincial Key Laboratory for Solid Organic Waste Utilization, Nanjing Agricultural University, Nanjing, 210095, China
| | - Min Wang
- Jiangsu Provincial Key Laboratory for Solid Organic Waste Utilization, Nanjing Agricultural University, Nanjing, 210095, China
| | - Jianyun Ruan
- Key Laboratory of Tea Plant Biology and Resources Utilization (Ministry of Agriculture), Tea Research Institute, Chinese Academy of Agricultural Sciences, Hangzhou, 310008, China
| | - Shiwei Guo
- Jiangsu Provincial Key Laboratory for Solid Organic Waste Utilization, Nanjing Agricultural University, Nanjing, 210095, China
| | - Philippe Vandenkoornhuyse
- UMR 6553 EcoBio, Universite de Rennes 1, CNRS, campus Beaulieu, Avenue du Général Leclerc, 35042, Rennes Cedex, France
| | - Qirong Shen
- Jiangsu Provincial Key Laboratory for Solid Organic Waste Utilization, Nanjing Agricultural University, Nanjing, 210095, China
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14
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Defrenne CE, Philpott TJ, Guichon SHA, Roach WJ, Pickles BJ, Simard SW. Shifts in Ectomycorrhizal Fungal Communities and Exploration Types Relate to the Environment and Fine-Root Traits Across Interior Douglas-Fir Forests of Western Canada. FRONTIERS IN PLANT SCIENCE 2019; 10:643. [PMID: 31191571 PMCID: PMC6547044 DOI: 10.3389/fpls.2019.00643] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/18/2019] [Accepted: 04/29/2019] [Indexed: 05/20/2023]
Abstract
Large-scale studies that examine the responses of ectomycorrhizal fungi across biogeographic gradients are necessary to assess their role in mediating current and predicted future alterations in forest ecosystem processes. We assessed the extent of environmental filtering on interior Douglas-fir (Pseudotsuga menziesii var. glauca (Beissn.) Franco) ectomycorrhizal fungal communities across regional gradients in precipitation, temperature, and soil fertility in interior Douglas-fir dominated forests of western Canada. We also examined relationships between fine-root traits and mycorrhizal fungal exploration types by combining root and fungal trait measurements with next-generation sequencing. Temperature, precipitation, and soil C:N ratio affected fungal community dissimilarity and exploration type abundance but had no effect on α-diversity. Fungi with rhizomorphs (e.g., Piloderma sp.) or proteolytic abilities (e.g., Cortinarius sp.) dominated communities in warmer and less fertile environments. Ascomycetes (e.g., Cenococcum geophilum) or shorter distance explorers, which potentially cost the plant less C, were favored in colder/drier climates where soils were richer in total nitrogen. Environmental filtering of ectomycorrhizal fungal communities is potentially related to co-evolutionary history between Douglas-fir populations and fungal symbionts, suggesting success of interior Douglas-fir as climate changes may be dependent on maintaining strong associations with local communities of mycorrhizal fungi. No evidence for a link between root and fungal resource foraging strategies was found at the regional scale. This lack of evidence further supports the need for a mycorrhizal symbiosis framework that is independent of root trait frameworks, to aid in understanding belowground plant uptake strategies across environments.
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Affiliation(s)
- Camille E. Defrenne
- Department of Forest and Conservation Sciences, Faculty of Forestry, The University of British Columbia, Vancouver, BC, Canada
| | - Timothy J. Philpott
- Ministry of Forests, Lands, Natural Resource Operations and Rural Development, Cariboo-Chilcotin Natural Resource District, Williams Lake, BC, Canada
| | - Shannon H. A. Guichon
- Stable Isotope Facility, Department of Forest and Conservation Sciences, University of British Columbia, Vancouver, BC, Canada
| | - W. Jean Roach
- Skyline Forestry Consultants Ltd., Kamloops, BC, Canada
| | - Brian J. Pickles
- School of Biological Sciences, University of Reading, Reading, United Kingdom
| | - Suzanne W. Simard
- Department of Forest and Conservation Sciences, Faculty of Forestry, The University of British Columbia, Vancouver, BC, Canada
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15
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Li F, Kuang Y, Liu N, Ge F. Extracellular polymeric substrates of Chlorella vulgaris F1068 weaken stress of cetyltrimethyl ammonium chloride on ammonium uptake. THE SCIENCE OF THE TOTAL ENVIRONMENT 2019; 661:678-684. [PMID: 30684836 DOI: 10.1016/j.scitotenv.2018.12.472] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/27/2018] [Revised: 12/29/2018] [Accepted: 12/31/2018] [Indexed: 06/09/2023]
Abstract
This study investigated the influences of cetyltrimethyl trimethyl ammonium chloride (CTAC), an emerging pollutant quaternary ammonium compound (QAC) in municipal effluents, on the transfer and uptake of NH4+ by Chlorella vulgaris F1068 cells removed EPS artificially (EPS-R) and coated EPS naturally (EPS-C) under different scenarios (e.g., the presence or absence of CTAC, different photoperiod sequences (light 12 h: dark 12 h or dark 12 h: light 12 h)). The results showed that the removal of EPS increased the transfer and uptake of NH4+ but the presence of EPS caged NH4+ and effectively weakened the stress of CTAC (<0.5 mg/L) on NH4+ uptake. The main mechanism was considered that CTAC in the concentration range from 0.1 to 0.5 mg/L induced an increased amount of polysaccharide and protein in EPS and thus protected algal normal physiological functions (including cell membrane permeability and glutamine synthetase activity) from the damage of CTAC (0.1 to 0.5 mg/L) regardless of the photoperiod sequences. Thereby, the findings of this study provided an insight into the role of algal EPS in transfer and uptake of nutrients under the coexisted toxics for the future algae-based sewage treatment application.
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Affiliation(s)
- Feng Li
- College of Environment and Resources, Xiangtan University, Xiangtan 411105, China; Hunan Engineering Laboratory for High Efficiency Purification Technology and its Application on Complex Heavy Metal Wastewater Treatment, Xiangtan 411105, China
| | - Yangduo Kuang
- College of Environment and Resources, Xiangtan University, Xiangtan 411105, China; Hunan Engineering Laboratory for High Efficiency Purification Technology and its Application on Complex Heavy Metal Wastewater Treatment, Xiangtan 411105, China
| | - Na Liu
- College of Environment and Resources, Xiangtan University, Xiangtan 411105, China; Hunan Engineering Laboratory for High Efficiency Purification Technology and its Application on Complex Heavy Metal Wastewater Treatment, Xiangtan 411105, China
| | - Fei Ge
- College of Environment and Resources, Xiangtan University, Xiangtan 411105, China; Hunan Engineering Laboratory for High Efficiency Purification Technology and its Application on Complex Heavy Metal Wastewater Treatment, Xiangtan 411105, China.
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16
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Kranabetter JM, Harman-Denhoed R, Hawkins BJ. Saprotrophic and ectomycorrhizal fungal sporocarp stoichiometry (C : N : P) across temperate rainforests as evidence of shared nutrient constraints among symbionts. THE NEW PHYTOLOGIST 2019; 221:482-492. [PMID: 30084239 DOI: 10.1111/nph.15380] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/30/2018] [Accepted: 07/07/2018] [Indexed: 06/08/2023]
Abstract
Quantifying nutritional dynamics of free-living saprotrophs and symbiotic ectomycorrhizal fungi in the field is challenging, but the stoichiometry of fruiting bodies (sporocarps) may be an effective methodology for this purpose. Carbon (C), nitrogen (N) and phosphorus (P) concentrations of soils, foliage and 146 sporocarp collections were analyzed from 14 Pseudotsuga menziesii var. menziesii stands across a podzolization gradient on Vancouver Island (Canada). N and P concentrations were considerably higher in saprotrophic fungi. Fungal N% increased with soil N content at a greater rate for saprotrophs than ectomycorrhizal fungi, while fungal P% of saprotrophs was more constrained. Fungal N : P was more responsive to soil N : P for ectomycorrhizal fungi (homeostatic regulation coefficient 'H' = 2.9) than saprotrophs (H = 5.9), while N : P of ectomycorrhizal fungi and host tree foliage scaled almost identically. Results underscore the role of ectomycorrhizal fungi as nutrient conduits, supporting host trees, whereas saprotrophs maintain a greater degree of nutritional homeostasis. Site nutrient constraints were shared in equal measure between ectomycorrhizal fungi and host trees, particularly for P, suggesting neither partner benefits from enhanced nutrition at the expense of the other. Sporocarp stoichiometry provides new insights into mycorrhizal relationships and illustrates pervasive P deficiencies across temperate rainforests of the Pacific Northwest.
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Affiliation(s)
- J Marty Kranabetter
- British Columbia Ministry of Forests, Lands and Natural Resource Operations, PO Box 9536, Stn Prov Govt, Victoria, BC, V8W 9C4, Canada
| | - Rachael Harman-Denhoed
- Centre for Forest Biology, University of Victoria, PO Box 3020, STN CSC, Victoria, BC, V8W 3N5, Canada
| | - Barbara J Hawkins
- Centre for Forest Biology, University of Victoria, PO Box 3020, STN CSC, Victoria, BC, V8W 3N5, Canada
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17
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Schröter K, Wemheuer B, Pena R, Schöning I, Ehbrecht M, Schall P, Ammer C, Daniel R, Polle A. Assembly processes of trophic guilds in the root mycobiome of temperate forests. Mol Ecol 2018; 28:348-364. [PMID: 30276908 DOI: 10.1111/mec.14887] [Citation(s) in RCA: 36] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/16/2018] [Revised: 09/05/2018] [Accepted: 09/17/2018] [Indexed: 01/09/2023]
Abstract
Root-associated mycobiomes (RAMs) link plant and soil ecological processes, thereby supporting ecosystem functions. Understanding the forces that govern the assembly of RAMs is key to sustainable ecosystem management. Here, we dissected RAMs according to functional guilds and combined phylogenetic and multivariate analyses to distinguish and quantify the forces driving RAM assembly processes. Across large biogeographic scales (>1,000 km) in temperate forests (>100 plots), RAMs were taxonomically highly distinct but composed of a stable trophic structure encompassing symbiotrophic, ectomycorrhizal (55%), saprotrophic (7%), endotrophic (3%) and pathotrophic fungi (<1%). Taxonomic community composition of RAMs is explained by abiotic factors, forest management intensity, dominant tree family (Fagaceae, Pinaceae) and root resource traits. Local RAM assemblies are phylogenetically clustered, indicating stronger habitat filtering on roots in dry, acid soils and in conifer stands than in other forest types. The local assembly of ectomycorrhizal communities is driven by forest management intensity. At larger scales, root resource traits and soil pH shift the assembly process of ectomycorrhizal fungi from deterministic to neutral. Neutral or weak deterministic assembly processes are prevalent in saprotrophic and endophytic guilds. The remarkable consistency of the trophic composition of the RAMs suggests that temperate forests attract fungal assemblages that afford functional resilience under the current range of climatic and edaphic conditions. At local scales, the filtering processes that structure symbiotrophic assemblies can be influenced by forest management and tree selection, but at larger scales, environmental cues and host resource traits are the most prevalent forces.
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Affiliation(s)
- Kristina Schröter
- Forest Botany and Tree Physiology, University of Goettingen, Göttingen, Germany
| | - Bernd Wemheuer
- Genomic and Applied Microbiology and Göttingen Genomics Laboratory, Institute of Microbiology and Genetics, University of Goettingen, Göttingen, Germany.,Centre for Marine Bio-Innovation, School of Biological Earth and Environmental Sciences, The University of New South Wales, Sydney, NSW, Australia
| | - Rodica Pena
- Forest Botany and Tree Physiology, University of Goettingen, Göttingen, Germany
| | - Ingo Schöning
- Max Planck Institute for Biogeochemistry, Jena, Germany
| | - Martin Ehbrecht
- Silviculture and Forest Ecology of the Temperate Zones, University of Goettingen, Göttingen, Germany
| | - Peter Schall
- Silviculture and Forest Ecology of the Temperate Zones, University of Goettingen, Göttingen, Germany
| | - Christian Ammer
- Silviculture and Forest Ecology of the Temperate Zones, University of Goettingen, Göttingen, Germany
| | - Rolf Daniel
- Genomic and Applied Microbiology and Göttingen Genomics Laboratory, Institute of Microbiology and Genetics, University of Goettingen, Göttingen, Germany
| | - Andrea Polle
- Forest Botany and Tree Physiology, University of Goettingen, Göttingen, Germany
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18
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Argüelles-Moyao A, Garibay-Orijel R. Ectomycorrhizal fungal communities in high mountain conifer forests in central Mexico and their potential use in the assisted migration of Abies religiosa. MYCORRHIZA 2018; 28:509-521. [PMID: 29948411 DOI: 10.1007/s00572-018-0841-0] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/13/2017] [Accepted: 05/29/2018] [Indexed: 06/08/2023]
Abstract
Abies religiosa forests in central Mexico are the only overwinter refuge of the monarch butterfly and provide important ecosystem services. These forests have lost 55% of their original area and as a consequence, diversity and biotic interactions in these ecosystems are in risk. The aim of this study was to compare the soil fungal diversity and community structure in the Abies religiosa forests and surrounding Pinus montezumae, Pinus hartwegii, and coniferous mixed forest plant communities to provide data on ecology of mycorrhizal interactions for the assisted migration of A. religiosa. We sampled soil from five coniferous forests, extracted total soil DNA, and sequenced the ITS2 region by Illumina MiSeq. The soil fungi community was integrated by 1746 taxa with a species turnover ranging from 0.280 to 0.461 between sampling sites. In the whole community, the more abundant and frequent species were Russula sp. (aff. olivobrunnea), Mortierella sp.1, and Piloderma sp. (aff. olivacearum). The ectomycorrhizal fungi were the more frequent and abundant functional group. A total of 298 species (84 ectomycorrhizal) was shared in the five conifer forests; these widely distributed species were dominated by Russulaceae and Clavulinaceae. The fungal community composition was significantly influenced by altitude and the lowest species turnover happened between the two A. religiosa forests even though they have different soil types. As Pinus montezumae forests have a higher altitudinal distribution adjacent to A. religiosa and share the largest number of ectomycorrhizal fungi with it, we suggest these forests as a potential habitat for new A. religiosa populations.
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Affiliation(s)
- Andrés Argüelles-Moyao
- Laboratorio de Sistemática, Ecología y Aprovechamiento de Hongos Ectomicorrízicos, Departamento de Botánica, Instituto de Biología, Universidad Nacional Autónoma de México, Circuito Exterior s/n, Ciudad Universitaria. Del. Coyoacán, C.P. 04510, Mexico City, CDMX, Mexico
- Posgrado en Ciencias Biológicas, Edificio B, 1° Piso, Unidad de Posgrado, Circuito de Posgrados, Universidad Nacional Autónoma de México, Ciudad Universitaria, Del. Coyoacán, C.P. 04510, Mexico City, CDMX, Mexico
| | - Roberto Garibay-Orijel
- Laboratorio de Sistemática, Ecología y Aprovechamiento de Hongos Ectomicorrízicos, Departamento de Botánica, Instituto de Biología, Universidad Nacional Autónoma de México, Circuito Exterior s/n, Ciudad Universitaria. Del. Coyoacán, C.P. 04510, Mexico City, CDMX, Mexico.
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19
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Acclimation of Fine Root Systems to Soil Warming: Comparison of an Experimental Setup and a Natural Soil Temperature Gradient. Ecosystems 2018. [DOI: 10.1007/s10021-018-0280-y] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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20
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Rúa MA, Lamit LJ, Gehring C, Antunes PM, Hoeksema JD, Zabinski C, Karst J, Burns C, Woods MJ. Accounting for local adaptation in ectomycorrhizas: a call to track geographical origin of plants, fungi, and soils in experiments. MYCORRHIZA 2018; 28:187-195. [PMID: 29181636 DOI: 10.1007/s00572-017-0811-y] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/07/2017] [Accepted: 11/16/2017] [Indexed: 06/07/2023]
Abstract
Local adaptation, the differential success of genotypes in their native versus foreign environments, can influence ecological and evolutionary processes, yet its importance is difficult to estimate because it has not been widely studied, particularly in the context of interspecific interactions. Interactions between ectomycorrhizal (EM) fungi and their host plants could serve as model system for investigations of local adaptation because they are widespread and affect plant responses to both biotic and abiotic selection pressures. Furthermore, because EM fungi cycle nutrients and mediate energy flow into food webs, their local adaptation may be critical in sustaining ecological function. Despite their ecological importance and an extensive literature on their relationships with plants, the vast majority of experiments on EM symbioses fail to report critical information needed to assess local adaptation: the geographic origin of the plant, fungal inocula, and soil substrate used in the experiment. These omissions limit the utility of such studies and restrict our understanding of EM ecology and evolution. Here, we illustrate the potential importance of local adaptation in EM relationships and call for consistent reporting of the geographic origin of plant, soil, and fungi as an important step towards a better understanding of the ecology and evolution of EM symbioses.
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Affiliation(s)
- Megan A Rúa
- Department of Biological Sciences, Wright State University, 3640 Colonel Glenn Hwy, Dayton, OH, 45435, USA.
| | - Louis J Lamit
- Department of Biology, Syracuse University, 107 College Place, Syracuse, NY, 13244, USA
| | - Catherine Gehring
- Department of Biological Sciences and Merriam-Powell Center for Environmental Research, Northern Arizona University, 617 S. Beaver Street, Flagstaff, AZ, 86011-5640, USA
| | - Pedro M Antunes
- Department of Biology, Algoma University, 1520 Queen Street East, Sault Ste. Marie, Ontario, P6A 2G4, Canada
| | - Jason D Hoeksema
- Department of Biology, University of Mississippi, P.O. Box 1848, University, MS, 38677, USA
| | - Cathy Zabinski
- Department of Land Resources and Environmental Sciences, Montana State University, 344 Leon Johnson Hall, Bozeman, MT, 59717, USA
| | - Justine Karst
- Department of Renewable Resources, University of Alberta, 442 Earth Sciences Building, Edmonton, Alberta, T6G 2E3, Canada
| | - Cole Burns
- Department of Biological Sciences, University of Calgary, 284 Biological Sciences, Calgary, Alberta, T2N 1N4, Canada
| | - Michaela J Woods
- Department of Biological Sciences, Wright State University, 3640 Colonel Glenn Hwy, Dayton, OH, 45435, USA
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21
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Kranabetter JM, Berch SM, MacKinnon JA, Ceska O, Dunn DE, Ott PK. Species-area curve and distance-decay relationships indicate habitat thresholds of ectomycorrhizal fungi in an old-growth Pseudotsuga menziesii
landscape. DIVERS DISTRIB 2018. [DOI: 10.1111/ddi.12720] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022] Open
Affiliation(s)
- J. M. Kranabetter
- British Columbia Ministry of Forests, Lands and Natural Resource Operations; Victoria BC Canada
| | - S. M. Berch
- British Columbia Ministry of Environment; Victoria BC Canada
| | - J. A. MacKinnon
- School of Resource and Environmental Management; Simon Fraser University; Burnaby BC Canada
| | - O. Ceska
- Consulting Mycologist; Victoria BC Canada
| | - D. E. Dunn
- Pacific Forestry Centre; Natural Resources Canada; Victoria BC Canada
| | - P. K. Ott
- British Columbia Ministry of Forests, Lands and Natural Resource Operations; Victoria BC Canada
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22
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Ostonen I, Truu M, Helmisaari HS, Lukac M, Borken W, Vanguelova E, Godbold DL, Lõhmus K, Zang U, Tedersoo L, Preem JK, Rosenvald K, Aosaar J, Armolaitis K, Frey J, Kabral N, Kukumägi M, Leppälammi-Kujansuu J, Lindroos AJ, Merilä P, Napa Ü, Nöjd P, Parts K, Uri V, Varik M, Truu J. Adaptive root foraging strategies along a boreal-temperate forest gradient. THE NEW PHYTOLOGIST 2017; 215:977-991. [PMID: 28586137 DOI: 10.1111/nph.14643] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/15/2017] [Accepted: 04/30/2017] [Indexed: 05/05/2023]
Abstract
The tree root-mycorhizosphere plays a key role in resource uptake, but also in the adaptation of forests to changing environments. The adaptive foraging mechanisms of ectomycorrhizal (EcM) and fine roots of Picea abies, Pinus sylvestris and Betula pendula were evaluated along a gradient from temperate to subarctic boreal forest (38 sites between latitudes 48°N and 69°N) in Europe. Variables describing tree resource uptake structures and processes (absorptive fine root biomass and morphology, nitrogen (N) concentration in absorptive roots, extramatrical mycelium (EMM) biomass, community structure of root-associated EcM fungi, soil and rhizosphere bacteria) were used to analyse relationships between root system functional traits and climate, soil and stand characteristics. Absorptive fine root biomass per stand basal area increased significantly from temperate to boreal forests, coinciding with longer and thinner root tips with higher tissue density, smaller EMM biomass per root length and a shift in soil microbial community structure. The soil carbon (C) : N ratio was found to explain most of the variability in absorptive fine root and EMM biomass, root tissue density, N concentration and rhizosphere bacterial community structure. We suggest a concept of absorptive fine root foraging strategies involving both qualitative and quantitative changes in the root-mycorrhiza-bacteria continuum along climate and soil C : N gradients.
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Affiliation(s)
- Ivika Ostonen
- Institute of Ecology and Earth Sciences, University of Tartu, 46 Vanemuise, Tartu, 51014, Estonia
| | - Marika Truu
- Institute of Ecology and Earth Sciences, University of Tartu, 46 Vanemuise, Tartu, 51014, Estonia
| | | | - Martin Lukac
- School of Agriculture, Policy and Development, University of Reading, Reading, RG6 6AR, UK
- Faculty of Forestry and Wood Sciences, Czech University of Life Sciences in Prague, Prague, 165 00, Czech Republic
| | - Werner Borken
- Soil Ecology, University of Bayreuth, Dr.-Hans-Frisch-Straße 1-3, D 95448, Bayreuth, Germany
| | - Elena Vanguelova
- Centre for Ecosystem, Society and Biosecurity Forest Research, Farnham, GU10 4LH, UK
| | - Douglas L Godbold
- Institute of Forest Ecology, University of Natural Resources and Life Sciences, BOKU, 1190, Vienna, Austria
- Global Change Research Institute, Ceské Budejovice, 370 05, Czech Republic
| | - Krista Lõhmus
- Institute of Ecology and Earth Sciences, University of Tartu, 46 Vanemuise, Tartu, 51014, Estonia
| | - Ulrich Zang
- Soil Ecology, University of Bayreuth, Dr.-Hans-Frisch-Straße 1-3, D 95448, Bayreuth, Germany
| | - Leho Tedersoo
- Natural History Museum and Botanical Garden, University of Tartu, 14a Ravila, Tartu, 50411, Estonia
| | - Jens-Konrad Preem
- Institute of Ecology and Earth Sciences, University of Tartu, 46 Vanemuise, Tartu, 51014, Estonia
| | - Katrin Rosenvald
- Institute of Ecology and Earth Sciences, University of Tartu, 46 Vanemuise, Tartu, 51014, Estonia
| | - Jürgen Aosaar
- Institute of Forestry and Rural Engineering, Estonian University of Life Sciences, Kreutzwaldi 5, Tartu, 51014, Estonia
| | - Kęstutis Armolaitis
- Institute of Forestry, Lithuanian Research Centre for Agriculture and Forestry, Liepų str. 1, Kaunas District, LT-53101, Girionys, Lithuania
| | - Jane Frey
- Institute of Ecology and Earth Sciences, University of Tartu, 46 Vanemuise, Tartu, 51014, Estonia
| | - Naima Kabral
- Institute of Ecology and Earth Sciences, University of Tartu, 46 Vanemuise, Tartu, 51014, Estonia
| | - Mai Kukumägi
- Institute of Ecology and Earth Sciences, University of Tartu, 46 Vanemuise, Tartu, 51014, Estonia
| | | | - Antti-Jussi Lindroos
- Natural Resources Institute Finland (Luke), Oulu, 90570, Finland
- Natural Resources Institute Finland (Luke), Helsinki, 00790, Finland
| | - Päivi Merilä
- Natural Resources Institute Finland (Luke), Oulu, 90570, Finland
- Natural Resources Institute Finland (Luke), Helsinki, 00790, Finland
| | - Ülle Napa
- Institute of Ecology and Earth Sciences, University of Tartu, 46 Vanemuise, Tartu, 51014, Estonia
| | - Pekka Nöjd
- Natural Resources Institute Finland (Luke), Luke c/o Aalto yliopisto, PL 16200, 00076, Aalto, Finland
| | - Kaarin Parts
- Institute of Ecology and Earth Sciences, University of Tartu, 46 Vanemuise, Tartu, 51014, Estonia
| | - Veiko Uri
- Institute of Forestry and Rural Engineering, Estonian University of Life Sciences, Kreutzwaldi 5, Tartu, 51014, Estonia
| | - Mats Varik
- Institute of Forestry and Rural Engineering, Estonian University of Life Sciences, Kreutzwaldi 5, Tartu, 51014, Estonia
| | - Jaak Truu
- Institute of Ecology and Earth Sciences, University of Tartu, 46 Vanemuise, Tartu, 51014, Estonia
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23
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Nicholson BA, Jones MD. Early-successional ectomycorrhizal fungi effectively support extracellular enzyme activities and seedling nitrogen accumulation in mature forests. MYCORRHIZA 2017; 27:247-260. [PMID: 27900594 DOI: 10.1007/s00572-016-0747-7] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/04/2016] [Accepted: 11/17/2016] [Indexed: 06/06/2023]
Abstract
After stand-replacing disturbance, regenerating conifer seedlings become colonized by different ectomycorrhizal fungi (EMF) than the locally adapted EMF communities present on seedlings in mature forests. We studied whether EMF species that colonized subalpine fir (Abies lasiocarpa) seedlings in clearcuts differed from those that colonized seedlings in adjacent mature forests with respect to mycorrhizoplane extracellular enzyme activities (EEAs) and N status of the seedlings. We tested two alternate hypotheses: (1) that EEAs would differ between the two EMF communities, with higher activities associated with forest-origin communities, and (2) that acclimation to soil environment was considerable enough that EEAs would be determined primarily by the soil type in which the ectomycorrhizas were growing. Naturally colonized fir seedlings were reciprocally transplanted between clearcuts and forests, carrying different EMF communities with them. EEAs were influenced more by destination environment than by EMF community. EEAs were as high in early-successional as in late-successional communities in both destination environments. Buds of clearcut-origin seedlings had the same or higher N contents as forest seedlings after a growing season in either environment. These results indicate that (i) symbiotic EMF and/or their associated microbial communities demonstrate substantial ability to acclimate to new field environments; (ii) the ability to produce organic matter-degrading enzymes is not a trait that necessarily distinguishes early- and late-successional EMF communities in symbiosis; (iii) early-successional EMF are as capable of supporting seedling N accumulation in forest soils as late-successional EMF; and (iv) disturbed ecosystems where early-successional EMF are present should have high resilience for organic matter degradation.
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Affiliation(s)
- Bailey A Nicholson
- Biology Department, University of British Columbia, Okanagan campus, Sci 385 - 1177 Research Road, Kelowna, BC, V1V 1V7, Canada
| | - Melanie D Jones
- Biology Department, University of British Columbia, Okanagan campus, Sci 385 - 1177 Research Road, Kelowna, BC, V1V 1V7, Canada.
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