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For: Freeman JS, Potts BM, Downes GM, Pilbeam D, Thavamanikumar S, Vaillancourt RE. Stability of quantitative trait loci for growth and wood properties across multiple pedigrees and environments in Eucalyptus globulus. New Phytol 2013;198:1121-1134. [PMID: 23517065 DOI: 10.1111/nph.12237] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/19/2012] [Accepted: 02/14/2013] [Indexed: 05/05/2023]
Number Cited by Other Article(s)
1
Cappa EP, Chen C, Klutsch JG, Sebastian-Azcona J, Ratcliffe B, Wei X, Da Ros L, Liu Y, Bhumireddy SR, Benowicz A, Mansfield SD, Erbilgin N, Thomas BR, El-Kassaby YA. Revealing stable SNPs and genomic prediction insights across environments enhance breeding strategies of productivity, defense, and climate-adaptability traits in white spruce. Heredity (Edinb) 2025;134:186-199. [PMID: 39939512 PMCID: PMC11977214 DOI: 10.1038/s41437-025-00747-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/28/2024] [Revised: 02/02/2025] [Accepted: 02/03/2025] [Indexed: 02/14/2025]  Open
2
Hernández MA, Butler JB, Ammitzboll H, Weller JL, Vaillancourt RE, Potts BM. Genetic control of the operculum and capsule morphology of Eucalyptus globulus. ANNALS OF BOTANY 2022;130:97-108. [PMID: 35652517 PMCID: PMC9295918 DOI: 10.1093/aob/mcac072] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/27/2022] [Accepted: 05/29/2022] [Indexed: 06/15/2023]
3
Mori H, Ueno S, Ujino-Ihara T, Fujiwara T, Yamashita K, Kanetani S, Endo R, Matsumoto A, Uchiyama K, Yoshida T, Sakai Y, Moriguchi Y, Kusano R, Tsumura Y. Genotype-by-environment interaction and genetic dissection of heartwood color in Cryptomeria japonica based on multiple common gardens and quantitative trait loci mapping. PLoS One 2022;17:e0270522. [PMID: 35793335 PMCID: PMC9258842 DOI: 10.1371/journal.pone.0270522] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/17/2021] [Accepted: 06/10/2022] [Indexed: 11/19/2022]  Open
4
Wellington CN, Vaillancourt RE, Potts BM, Worledge D, O’Grady AP. Genetic Variation in Flowering Traits of Tasmanian Leptospermum scoparium and Association with Provenance Home Site Climatic Factors. PLANTS 2022;11:plants11081029. [PMID: 35448758 PMCID: PMC9029099 DOI: 10.3390/plants11081029] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/24/2022] [Revised: 03/17/2022] [Accepted: 04/01/2022] [Indexed: 11/29/2022]
5
Wei S, Yang G, Yang Y, Yin T. Time-sequential detection of quantitative trait loci and candidate genes underlying the dynamic growth of Salix suchowensis. TREE PHYSIOLOGY 2022;42:877-890. [PMID: 34761273 DOI: 10.1093/treephys/tpab138] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/26/2021] [Accepted: 10/12/2021] [Indexed: 06/13/2023]
6
Zhu X, Weng Q, Bush D, Zhou C, Zhao H, Wang P, Li F. High-density genetic linkage mapping reveals low stability of QTLs across environments for economic traits in Eucalyptus. FRONTIERS IN PLANT SCIENCE 2022;13:1099705. [PMID: 37082511 PMCID: PMC10112524 DOI: 10.3389/fpls.2022.1099705] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/16/2022] [Accepted: 12/28/2022] [Indexed: 05/03/2023]
7
Ghosh Dasgupta M, Abdul Bari MP, Shanmugavel S, Dharanishanthi V, Muthupandi M, Kumar N, Chauhan SS, Kalaivanan J, Mohan H, Krutovsky KV, Rajasugunasekar D. Targeted re-sequencing and genome-wide association analysis for wood property traits in breeding population of Eucalyptus tereticornis × E. grandis. Genomics 2021;113:4276-4292. [PMID: 34785351 DOI: 10.1016/j.ygeno.2021.11.013] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2020] [Revised: 06/20/2021] [Accepted: 11/10/2021] [Indexed: 11/16/2022]
8
Identification of Candidate Gene-Based Markers for Girth Growth in Rubber Trees. PLANTS 2021;10:plants10071440. [PMID: 34371639 PMCID: PMC8309273 DOI: 10.3390/plants10071440] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/21/2021] [Revised: 07/08/2021] [Accepted: 07/12/2021] [Indexed: 02/01/2023]
9
Sattar MN, Iqbal Z, Al-Khayri JM, Jain SM. Induced Genetic Variations in Fruit Trees Using New Breeding Tools: Food Security and Climate Resilience. PLANTS (BASEL, SWITZERLAND) 2021;10:1347. [PMID: 34371550 PMCID: PMC8309169 DOI: 10.3390/plants10071347] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/22/2021] [Revised: 06/23/2021] [Accepted: 06/28/2021] [Indexed: 12/22/2022]
10
Population Divergence along a Genetic Line of Least Resistance in the Tree Species Eucalyptus globulus. Genes (Basel) 2020;11:genes11091095. [PMID: 32962131 PMCID: PMC7565133 DOI: 10.3390/genes11091095] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/07/2020] [Accepted: 09/11/2020] [Indexed: 11/30/2022]  Open
11
Bartholomé J, Mabiala A, Burlett R, Bert D, Leplé JC, Plomion C, Gion JM. The pulse of the tree is under genetic control: eucalyptus as a case study. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2020;103:338-356. [PMID: 32142191 DOI: 10.1111/tpj.14734] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/06/2019] [Revised: 01/16/2020] [Accepted: 02/17/2020] [Indexed: 06/10/2023]
12
Proteomic analyses unraveling water stress response in two Eucalyptus species originating from contrasting environments for aridity. Mol Biol Rep 2020;47:5191-5205. [PMID: 32564226 DOI: 10.1007/s11033-020-05594-1] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2020] [Accepted: 06/17/2020] [Indexed: 12/24/2022]
13
Non-Destructive Evaluation Techniques and What They Tell Us about Wood Property Variation. FORESTS 2019. [DOI: 10.3390/f10090728] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
14
Bayesian Mapping Reveals Large-Effect Pleiotropic QTLs for Wood Density and Slenderness Index in 17-Year-Old Trees of Eucalyptus cladocalyx. FORESTS 2019. [DOI: 10.3390/f10030241] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
15
Calleja-Rodriguez A, Li Z, Hallingbäck HR, Sillanpää MJ, Wu HX, Abrahamsson S, García-Gil MR. Analysis of phenotypic- and Estimated Breeding Values (EBV) to dissect the genetic architecture of complex traits in a Scots pine three-generation pedigree design. J Theor Biol 2019;462:283-292. [PMID: 30423305 DOI: 10.1016/j.jtbi.2018.11.007] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2018] [Revised: 10/17/2018] [Accepted: 11/09/2018] [Indexed: 11/28/2022]
16
Genomic Prediction of Growth and Stem Quality Traits in Eucalyptus globulus Labill. at Its Southernmost Distribution Limit in Chile. FORESTS 2018. [DOI: 10.3390/f9120779] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
17
Rosa JRBF, Mantello CC, Garcia D, de Souza LM, da Silva CC, Gazaffi R, da Silva CC, Toledo-Silva G, Cubry P, Garcia AAF, de Souza AP, Le Guen V. QTL detection for growth and latex production in a full-sib rubber tree population cultivated under suboptimal climate conditions. BMC PLANT BIOLOGY 2018;18:223. [PMID: 30305095 PMCID: PMC6180592 DOI: 10.1186/s12870-018-1450-y] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/10/2017] [Accepted: 09/27/2018] [Indexed: 05/05/2023]
18
Butler JB, Vaillancourt RE, Potts BM, Lee DJ, King GJ, Baten A, Shepherd M, Freeman JS. Comparative genomics of Eucalyptus and Corymbia reveals low rates of genome structural rearrangement. BMC Genomics 2017;18:397. [PMID: 28532390 PMCID: PMC5441008 DOI: 10.1186/s12864-017-3782-7] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/09/2016] [Accepted: 05/10/2017] [Indexed: 11/25/2022]  Open
19
Resende RT, Resende MDV, Silva FF, Azevedo CF, Takahashi EK, Silva-Junior OB, Grattapaglia D. Regional heritability mapping and genome-wide association identify loci for complex growth, wood and disease resistance traits in Eucalyptus. THE NEW PHYTOLOGIST 2017;213:1287-1300. [PMID: 28079935 DOI: 10.1111/nph.14266] [Citation(s) in RCA: 52] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/15/2016] [Accepted: 09/08/2016] [Indexed: 05/18/2023]
20
Gion JM, Hudson CJ, Lesur I, Vaillancourt RE, Potts BM, Freeman JS. Genome-wide variation in recombination rate in Eucalyptus. BMC Genomics 2016;17:590. [PMID: 27507140 PMCID: PMC4979139 DOI: 10.1186/s12864-016-2884-y] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2015] [Accepted: 07/06/2016] [Indexed: 11/25/2022]  Open
21
Gosney BJ, Potts BM, O'Reilly-Wapstra JM, Vaillancourt RE, Fitzgerald H, Davies NW, Freeman JS. Genetic control of cuticular wax compounds in Eucalyptus globulus. THE NEW PHYTOLOGIST 2016;209:202-215. [PMID: 26262563 DOI: 10.1111/nph.13600] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/13/2015] [Accepted: 07/08/2015] [Indexed: 06/04/2023]
22
Li F, Zhou C, Weng Q, Li M, Yu X, Guo Y, Wang Y, Zhang X, Gan S. Comparative Genomics Analyses Reveal Extensive Chromosome Colinearity and Novel Quantitative Trait Loci in Eucalyptus. PLoS One 2015;10:e0145144. [PMID: 26695430 PMCID: PMC4687840 DOI: 10.1371/journal.pone.0145144] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2015] [Accepted: 12/01/2015] [Indexed: 02/06/2023]  Open
23
Mixed model approach for IBD-based QTL mapping in a complex oil palm pedigree. BMC Genomics 2015;16:798. [PMID: 26472667 PMCID: PMC4608140 DOI: 10.1186/s12864-015-1985-3] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/23/2015] [Accepted: 10/06/2015] [Indexed: 11/13/2022]  Open
24
Silva-Junior OB, Faria DA, Grattapaglia D. A flexible multi-species genome-wide 60K SNP chip developed from pooled resequencing of 240 Eucalyptus tree genomes across 12 species. THE NEW PHYTOLOGIST 2015;206:1527-40. [PMID: 25684350 DOI: 10.1111/nph.13322] [Citation(s) in RCA: 71] [Impact Index Per Article: 7.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/22/2014] [Accepted: 01/02/2015] [Indexed: 05/23/2023]
25
Margarido GRA, Pastina MM, Souza AP, Garcia AAF. Multi-trait multi-environment quantitative trait loci mapping for a sugarcane commercial cross provides insights on the inheritance of important traits. MOLECULAR BREEDING : NEW STRATEGIES IN PLANT IMPROVEMENT 2015;35:175. [PMID: 26273212 PMCID: PMC4529881 DOI: 10.1007/s11032-015-0366-6] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/21/2014] [Accepted: 07/29/2015] [Indexed: 05/13/2023]
26
Sumathi M, Yasodha R. Microsatellite resources of Eucalyptus: current status and future perspectives. BOTANICAL STUDIES 2014;55:73. [PMID: 28510953 PMCID: PMC5430318 DOI: 10.1186/s40529-014-0073-3] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/06/2014] [Accepted: 09/30/2014] [Indexed: 06/07/2023]
27
Grattapaglia D, Mamani EMC, Silva-Junior OB, Faria DA. A novel genome-wide microsatellite resource for species ofEucalyptuswith linkage-to-physical correspondence on the reference genome sequence. Mol Ecol Resour 2014;15:437-48. [DOI: 10.1111/1755-0998.12317] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2014] [Revised: 08/05/2014] [Accepted: 08/13/2014] [Indexed: 12/29/2022]
28
de Miguel M, Cabezas JA, de María N, Sánchez-Gómez D, Guevara MÁ, Vélez MD, Sáez-Laguna E, Díaz LM, Mancha JA, Barbero MC, Collada C, Díaz-Sala C, Aranda I, Cervera MT. Genetic control of functional traits related to photosynthesis and water use efficiency in Pinus pinaster Ait. drought response: integration of genome annotation, allele association and QTL detection for candidate gene identification. BMC Genomics 2014;15:464. [PMID: 24919981 PMCID: PMC4144121 DOI: 10.1186/1471-2164-15-464] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/03/2013] [Accepted: 06/05/2014] [Indexed: 02/06/2023]  Open
29
Medeiros JS, Pockman WT. Freezing regime and trade-offs with water transport efficiency generate variation in xylem structure across diploid populations of Larrea sp. (Zygophyllaceae). AMERICAN JOURNAL OF BOTANY 2014;101:598-607. [PMID: 24699537 DOI: 10.3732/ajb.1400046] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
30
Cappa EP, El-Kassaby YA, Garcia MN, Acuña C, Borralho NMG, Grattapaglia D, Marcucci Poltri SN. Impacts of population structure and analytical models in genome-wide association studies of complex traits in forest trees: a case study in Eucalyptus globulus. PLoS One 2013;8:e81267. [PMID: 24282578 PMCID: PMC3839935 DOI: 10.1371/journal.pone.0081267] [Citation(s) in RCA: 43] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2013] [Accepted: 10/10/2013] [Indexed: 01/01/2023]  Open
31
Kremer A, Potts BM, Delzon S. Genetic divergence in forest trees: understanding the consequences of climate change. Funct Ecol 2013. [DOI: 10.1111/1365-2435.12169] [Citation(s) in RCA: 89] [Impact Index Per Article: 7.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
32
Bartholomé J, Salmon F, Vigneron P, Bouvet JM, Plomion C, Gion JM. Plasticity of primary and secondary growth dynamics in Eucalyptus hybrids: a quantitative genetics and QTL mapping perspective. BMC PLANT BIOLOGY 2013;13:120. [PMID: 23978279 PMCID: PMC3870978 DOI: 10.1186/1471-2229-13-120] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/29/2013] [Accepted: 08/14/2013] [Indexed: 05/05/2023]
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