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Bachofen C, Tumber-Dávila SJ, Mackay DS, McDowell NG, Carminati A, Klein T, Stocker BD, Mencuccini M, Grossiord C. Tree water uptake patterns across the globe. THE NEW PHYTOLOGIST 2024. [PMID: 38649790 DOI: 10.1111/nph.19762] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/29/2023] [Accepted: 03/13/2024] [Indexed: 04/25/2024]
Abstract
Plant water uptake from the soil is a crucial element of the global hydrological cycle and essential for vegetation drought resilience. Yet, knowledge of how the distribution of water uptake depth (WUD) varies across species, climates, and seasons is scarce relative to our knowledge of aboveground plant functions. With a global literature review, we found that average WUD varied more among biomes than plant functional types (i.e. deciduous/evergreen broadleaves and conifers), illustrating the importance of the hydroclimate, especially precipitation seasonality, on WUD. By combining records of rooting depth with WUD, we observed a consistently deeper maximum rooting depth than WUD with the largest differences in arid regions - indicating that deep taproots act as lifelines while not contributing to the majority of water uptake. The most ubiquitous observation across the literature was that woody plants switch water sources to soil layers with the highest water availability within short timescales. Hence, seasonal shifts to deep soil layers occur across the globe when shallow soils are drying out, allowing continued transpiration and hydraulic safety. While there are still significant gaps in our understanding of WUD, the consistency across global ecosystems allows integration of existing knowledge into the next generation of vegetation process models.
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Affiliation(s)
- Christoph Bachofen
- Plant Ecology Research Laboratory PERL, School of Architecture, Civil and Environmental Engineering, EPFL, 1015, Lausanne, Switzerland
- Functional Plant Ecology, Community Ecology Unit, Swiss Federal Institute for Forest, Snow and Landscape WSL, 1015, Lausanne, Switzerland
| | - Shersingh Joseph Tumber-Dávila
- Department of Environmental Studies, Dartmouth College, Hanover, NH, 03755, USA
- Harvard Forest, Harvard University, Petersham, MA, 01316, USA
| | - D Scott Mackay
- Department of Geography, University at Buffalo, Buffalo, NY, 14261, USA
| | - Nate G McDowell
- Atmospheric Sciences and Global Change Division, Pacific Northwest National Laboratory, Richland, WA, 99354, USA
- School of Biological Sciences, Washington State University, Pullman, WA, 99163, USA
| | - Andrea Carminati
- Physics of Soils and Terrestrial Ecosystems, Department of Environmental Systems Science, ETH Zürich, 8092, Zürich, Switzerland
| | - Tamir Klein
- Plant & Environmental Sciences Department, Weizmann Institute of Science, Rehovot, 76100, Israel
| | - Benjamin D Stocker
- Institute of Geography, University of Bern, Bern, 3013, Switzerland
- Oeschger Centre for Climate Change Research, University of Bern, 3013, Bern, Switzerland
| | - Maurizio Mencuccini
- CREAF, Cerdanyola del Vallès, Barcelona, 08193, Spain
- ICREA at CREAF, Cerdanyola del Vallès, Barcelona, 08193, Spain
| | - Charlotte Grossiord
- Plant Ecology Research Laboratory PERL, School of Architecture, Civil and Environmental Engineering, EPFL, 1015, Lausanne, Switzerland
- Functional Plant Ecology, Community Ecology Unit, Swiss Federal Institute for Forest, Snow and Landscape WSL, 1015, Lausanne, Switzerland
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Blystone S, Nuixe M, Traoré AS, Cochard H, Picon-Cochard C, Pagés G. Towards portable MRI in the plant sciences. PLANT METHODS 2024; 20:31. [PMID: 38369530 PMCID: PMC10874549 DOI: 10.1186/s13007-024-01152-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/10/2023] [Accepted: 02/05/2024] [Indexed: 02/20/2024]
Abstract
Plant physiology and structure are constantly changing according to internal and external factors. The study of plant water dynamics can give information on these changes, as they are linked to numerous plant functions. Currently, most of the methods used to study plant water dynamics are either invasive, destructive, or not easily accessible. Portable magnetic resonance imaging (MRI) is a field undergoing rapid expansion and which presents substantial advantages in the plant sciences. MRI permits the non-invasive study of plant water content, flow, structure, stress response, and other physiological processes, as a multitude of information can be obtained using the method, and portable devices make it possible to take these measurements in situ, in a plant's natural environment. In this work, we review the use of such devices applied to plants in climate chambers, greenhouses or in their natural environments. We also compare the use of portable MRI to other methods to obtain the same information and outline its advantages and disadvantages.
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Affiliation(s)
- Shannan Blystone
- Université Clermont Auvergne, INRAE, UR QuaPA, 63122, Saint-Genès-Champanelle, France
- INRAE, PROBE research infrastructure, AgroResonance facility, 63122, Saint-Genès-Champanelle, France
- Université Clermont Auvergne, INRAE, PIAF, 63000, Clermont-Ferrand, France
| | - Magali Nuixe
- Université Clermont Auvergne, INRAE, UR QuaPA, 63122, Saint-Genès-Champanelle, France
- INRAE, PROBE research infrastructure, AgroResonance facility, 63122, Saint-Genès-Champanelle, France
- Université Clermont Auvergne, INRAE, VetAgro Sup, UREP, 63000, Clermont-Ferrand, France
| | - Amidou Sissou Traoré
- Université Clermont Auvergne, INRAE, UR QuaPA, 63122, Saint-Genès-Champanelle, France
- INRAE, PROBE research infrastructure, AgroResonance facility, 63122, Saint-Genès-Champanelle, France
| | - Hervé Cochard
- Université Clermont Auvergne, INRAE, PIAF, 63000, Clermont-Ferrand, France
| | | | - Guilhem Pagés
- Université Clermont Auvergne, INRAE, UR QuaPA, 63122, Saint-Genès-Champanelle, France.
- INRAE, PROBE research infrastructure, AgroResonance facility, 63122, Saint-Genès-Champanelle, France.
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Xiao T, Li P, Fei W, Wang J. Effects of vegetation roots on the structure and hydraulic properties of soils: A perspective review. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 906:167524. [PMID: 37793452 DOI: 10.1016/j.scitotenv.2023.167524] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/15/2023] [Revised: 09/22/2023] [Accepted: 09/29/2023] [Indexed: 10/06/2023]
Abstract
This paper aims to provide a state-of-the-art review on the effects of vegetation roots on the soil structure and soil hydraulic properties. After a thorough review of current studies, the effects of vegetation roots are summarized into four: root exudation, root penetration, root water uptake and root decay. Root exudates alter the size and stability of aggregates, the contact angle of soil, and the viscosity and surface tension of pore fluid; root exudates of crops always increase the soil water retention capacity and decrease the soil saturated hydraulic conductivity. Root penetration creates new pores or clogs existing pores during root growth, and root parameters (e.g., root biomass density, root diameter and root length density) are well correlated to soil hydraulic properties. Root water uptake can apparently increase the soil water retention capacity by providing an additional negative pressure and induce micro-fissures and macropores in the rhizosphere soil. Root decay modifies the pore structure and water repellency of soil, resulting in the increase of soil macro-porosity, soil water retention, and the saturated hydraulic conductivity or steady infiltration rate. Some of the above four effects may be difficult to be distinguished, and most importantly each is highly time-dependent and influenced by a multitude of plant-related and soil-related factors. Therefore, it remains a significant challenge to comprehend and quantify the effects of vegetation roots on the soil structure and soil hydraulic properties. Unsolved questions and disputes that require further investigations in the future are summarized in this review.
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Affiliation(s)
- Tao Xiao
- State Key Laboratory of Continental Dynamics, Department of Geology, Northwest University, Xi'an 710069, China.
| | - Ping Li
- State Key Laboratory of Continental Dynamics, Department of Geology, Northwest University, Xi'an 710069, China; Water Cycle and Geological Environment Observation and Research Station for the Chinese Loess Plateau, Ministry of Education, Zhengning 745339, China.
| | - Wenbin Fei
- Department of Infrastructure Engineering, The University of Melbourne, Parkville, Australia.
| | - Jiading Wang
- State Key Laboratory of Continental Dynamics, Department of Geology, Northwest University, Xi'an 710069, China.
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4
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Colombi T, Eitelberg L, Kolb E, Legué V, Bogeat-Triboulot MB. Genotypic differences in systemic root responses to mechanical obstacles. PHYSIOLOGIA PLANTARUM 2023; 175:e14094. [PMID: 38148185 DOI: 10.1111/ppl.14094] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/07/2023] [Accepted: 11/08/2023] [Indexed: 12/28/2023]
Abstract
As roots grow through the soil to forage for water and nutrients, they encounter mechanical obstacles such as patches of dense soil and stones that locally impede root growth. Here, we investigated hitherto poorly understood systemic responses of roots to localised root impedance. Seedlings of two wheat genotypes were grown in hydroponics and exposed to impenetrable obstacles constraining the vertical growth of the primary or a single seminal root. We deployed high-resolution in vivo imaging to quantify temporal dynamics of root elongation rate, helical root movement, and root growth direction. The two genotypes exhibited distinctly different patterns of systemic responses to localised root impedance, suggesting different strategies to cope with obstacles, namely stress avoidance and stress tolerance. Shallower growth of unconstrained seminal roots and more pronounced helical movement of unconstrained primary and seminal roots upon localised root impedance characterised the avoidance strategy shown by one genotype. Stress tolerance to localised root impedance, as exhibited by the other genotype, was indicated by relatively fast elongation of primary roots and steeper seminal root growth. These different strategies highlight that the effects of mechanical obstacles on spatiotemporal root growth patterns can differ within species, which may have major implications for resource acquisition and whole-plant growth.
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Affiliation(s)
- Tino Colombi
- Department of Soil and Environment, Swedish University of Agricultural Sciences (SLU), Uppsala, Sweden
| | - Leah Eitelberg
- Department of Soil and Environment, Swedish University of Agricultural Sciences (SLU), Uppsala, Sweden
| | - Evelyne Kolb
- PMMH, CNRS, ESPCI Paris, Université PSL, Sorbonne Université, Université Paris Cité, Paris, France
| | - Valérie Legué
- Université Clermont Auvergne, INRAE, PIAF, Clermont-Ferrand, France
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Rishmawi L, Bauget F, Protto V, Bauland C, Nacry P, Maurel C. Natural variation of maize root hydraulic architecture underlies highly diverse water uptake capacities. PLANT PHYSIOLOGY 2023; 192:2404-2418. [PMID: 37052178 PMCID: PMC10315320 DOI: 10.1093/plphys/kiad213] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/23/2022] [Revised: 02/21/2023] [Accepted: 03/16/2023] [Indexed: 06/19/2023]
Abstract
Plant water uptake is determined by the root system architecture and its hydraulic capacity, which together define the root hydraulic architecture. The current research aims at understanding the water uptake capacities of maize (Zea mays), a model organism and major crop. We explored the genetic variations within a collection of 224 maize inbred Dent lines and successively defined core genotype subsets to access multiple architectural, anatomical, and hydraulic parameters in the primary root (PR) and seminal roots (SR) of hydroponically grown seedlings. We found 9-, 3.5-, and 12.4-fold genotypic differences for root hydraulics (Lpr), PR size, and lateral root size, respectively, that shaped wide and independent variations of root structure and function. Within genotypes, PR and SR showed similarities in hydraulics and, to a lesser extent, in anatomy. They had comparable aquaporin activity profiles that, however, could not be explained by aquaporin expression levels. Genotypic variations in the size and number of late meta xylem vessels were positively correlated with Lpr. Inverse modeling further revealed dramatic genotypic differences in the xylem conductance profile. Thus, tremendous natural variation of maize root hydraulic architecture underlies a high diversity of water uptake strategies and paves the way to quantitative genetic dissection of its elementary traits.
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Affiliation(s)
- Louai Rishmawi
- IPSiM, Univ Montpellier, CNRS, INRAE, Institut Agro, 34060 Montpellier, France
| | - Fabrice Bauget
- IPSiM, Univ Montpellier, CNRS, INRAE, Institut Agro, 34060 Montpellier, France
| | - Virginia Protto
- IPSiM, Univ Montpellier, CNRS, INRAE, Institut Agro, 34060 Montpellier, France
| | - Cyril Bauland
- Université Paris-Saclay, INRAE, CNRS, AgroParisTech, GQE—Le Moulon, Gif-sur-Yvette, France
| | - Philippe Nacry
- IPSiM, Univ Montpellier, CNRS, INRAE, Institut Agro, 34060 Montpellier, France
| | - Christophe Maurel
- IPSiM, Univ Montpellier, CNRS, INRAE, Institut Agro, 34060 Montpellier, France
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Müllers Y, Postma JA, Poorter H, van Dusschoten D. Deep-water uptake under drought improved due to locally increased root conductivity in maize, but not in faba bean. PLANT, CELL & ENVIRONMENT 2023; 46:2046-2060. [PMID: 36942406 DOI: 10.1111/pce.14587] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/22/2022] [Revised: 03/16/2023] [Accepted: 03/19/2023] [Indexed: 06/08/2023]
Abstract
Moderate soil drying can cause a strong decrease in the soil-root system conductance. The resulting impact on root water uptake depends on the spatial distribution of the altered conductance relatively to remaining soil water resources, which is largely unknown. Here, we analyzed the vertical distribution of conductance across root systems using a novel, noninvasive sensor technology on pot-grown faba bean and maize plants. Withholding water for 4 days strongly enhanced the vertical gradient in soil water potential. Therefore, roots in upper and deeper soil layers were affected differently: In drier, upper layers, root conductance decreased by 66%-72%, causing an amplification of the drop in leaf water potential. In wetter, deeper layers, root conductance increased in maize but not in faba bean. The consequently facilitated deep-water uptake in maize contributed up to 21% of total water uptake at the end of the measurement. Analysis of root length distributions with MRI indicated that the locally increased conductance was mainly caused by an increased intrinsic conductivity and not by additional root growth. Our findings show that plants can partly compensate for a reduced root conductance in upper, drier soil layers by locally increasing root conductivity in wetter layers, thereby improving deep-water uptake.
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Affiliation(s)
- Yannik Müllers
- IBG-2, Plant Sciences, Forschungszentrum Jülich, Jülich, Germany
| | | | - Hendrik Poorter
- IBG-2, Plant Sciences, Forschungszentrum Jülich, Jülich, Germany
- Department of Natural Sciences, Macquarie University, Sydney, Australia
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Harandi N, Vandenberghe B, Vankerschaver J, Depuydt S, Van Messem A. How to make sense of 3D representations for plant phenotyping: a compendium of processing and analysis techniques. PLANT METHODS 2023; 19:60. [PMID: 37353846 DOI: 10.1186/s13007-023-01031-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Received: 10/18/2022] [Accepted: 05/19/2023] [Indexed: 06/25/2023]
Abstract
Computer vision technology is moving more and more towards a three-dimensional approach, and plant phenotyping is following this trend. However, despite its potential, the complexity of the analysis of 3D representations has been the main bottleneck hindering the wider deployment of 3D plant phenotyping. In this review we provide an overview of typical steps for the processing and analysis of 3D representations of plants, to offer potential users of 3D phenotyping a first gateway into its application, and to stimulate its further development. We focus on plant phenotyping applications where the goal is to measure characteristics of single plants or crop canopies on a small scale in research settings, as opposed to large scale crop monitoring in the field.
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Affiliation(s)
- Negin Harandi
- Center for Biosystems and Biotech Data Science, Ghent University Global Campus, 119 Songdomunhwa-ro, Yeonsu-gu, Incheon, South Korea
- Department of Applied Mathematics, Computer Science and Statistics, Ghent University, Krijgslaan 281, S9, Ghent, Belgium
| | | | - Joris Vankerschaver
- Center for Biosystems and Biotech Data Science, Ghent University Global Campus, 119 Songdomunhwa-ro, Yeonsu-gu, Incheon, South Korea
- Department of Applied Mathematics, Computer Science and Statistics, Ghent University, Krijgslaan 281, S9, Ghent, Belgium
| | - Stephen Depuydt
- Erasmus Applied University of Sciences and Arts, Campus Kaai, Nijverheidskaai 170, Anderlecht, Belgium
| | - Arnout Van Messem
- Department of Mathematics, Université de Liège, Allée de la Découverte 12, Liège, Belgium.
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Wu Q, Wu J, Hu P, Zhang W, Ma Y, Yu K, Guo Y, Cao J, Li H, Li B, Yao Y, Cao H, Zhang W. Quantification of the three-dimensional root system architecture using an automated rotating imaging system. PLANT METHODS 2023; 19:11. [PMID: 36732764 PMCID: PMC9896698 DOI: 10.1186/s13007-023-00988-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/22/2022] [Accepted: 01/24/2023] [Indexed: 06/18/2023]
Abstract
BACKGROUND Crop breeding based on root system architecture (RSA) optimization is an essential factor for improving crop production in developing countries. Identification, evaluation, and selection of root traits of soil-grown crops require innovations that enable high-throughput and accurate quantification of three-dimensional (3D) RSA of crops over developmental time. RESULTS We proposed an automated imaging system and 3D imaging data processing pipeline to quantify the 3D RSA of soil-grown individual plants across seedlings to the mature stage. A multi-view automated imaging system composed of a rotary table and an imaging arm with 12 cameras mounted with a combination of fan-shaped and vertical distribution was developed to obtain 3D image data of roots grown on a customized root support mesh. A 3D imaging data processing pipeline was developed to quantify the 3D RSA based on the point cloud generated from multi-view images. The global architecture of root systems can be quantified automatically. Detailed analysis of the reconstructed 3D root model also allowed us to investigate the Spatio-temporal distribution of roots. A method combining horizontal slicing and iterative erosion and dilation was developed to automatically segment different root types, and identify local root traits (e.g., length, diameter of the main root, and length, diameter, initial angle, and the number of nodal roots or lateral roots). One maize (Zea mays L.) cultivar and two rapeseed (Brassica napus L.) cultivars at different growth stages were selected to test the performance of the automated imaging system and 3D imaging data processing pipeline. CONCLUSIONS The results demonstrated the capabilities of the proposed imaging and analytical system for high-throughput phenotyping of root traits for both monocotyledons and dicotyledons across growth stages. The proposed system offers a potential tool to further explore the 3D RSA for improving root traits and agronomic qualities of crops.
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Affiliation(s)
- Qian Wu
- IGRB-IAI Joint Laboratory of Germplasm Resources Innovation & Information Utilization, YuanQi-IAI Joint Laboratory for Agricultural Digital Twin, Institute of Agricultural Information, Jiangsu Academy of Agricultural Sciences, Nanjing, 210014, Jiangsu, China
| | - Jie Wu
- Plant Phenomics Research Center, Academy for Advanced Interdisciplinary Studies, Nanjing Agricultural University, Nanjing, 210095, Jiangsu, China
| | - Pengcheng Hu
- School of Agriculture and Food Sciences, The University of Queensland, St. Lucia, QLD, 4072, Australia
| | - Weixin Zhang
- IGRB-IAI Joint Laboratory of Germplasm Resources Innovation & Information Utilization, YuanQi-IAI Joint Laboratory for Agricultural Digital Twin, Institute of Agricultural Information, Jiangsu Academy of Agricultural Sciences, Nanjing, 210014, Jiangsu, China
- School of Agricultural Engineering, Jiangsu University, Zhenjiang, 212013, Jiangsu, China
| | - Yuntao Ma
- College of Land Science and Technology, China Agricultural University, Beijing, 100193, China
| | - Kun Yu
- IGRB-IAI Joint Laboratory of Germplasm Resources Innovation & Information Utilization, Institute of Germplasm Resources and Biotechnology, Jiangsu Academy of Agricultural Sciences, Nanjing, 210014, Jiangsu, China
| | - Yan Guo
- College of Land Science and Technology, China Agricultural University, Beijing, 100193, China
| | - Jing Cao
- IGRB-IAI Joint Laboratory of Germplasm Resources Innovation & Information Utilization, YuanQi-IAI Joint Laboratory for Agricultural Digital Twin, Institute of Agricultural Information, Jiangsu Academy of Agricultural Sciences, Nanjing, 210014, Jiangsu, China
| | - Huayong Li
- IGRB-IAI Joint Laboratory of Germplasm Resources Innovation & Information Utilization, Institute of Germplasm Resources and Biotechnology, Jiangsu Academy of Agricultural Sciences, Nanjing, 210014, Jiangsu, China
| | - Baiming Li
- IGRB-IAI Joint Laboratory of Germplasm Resources Innovation & Information Utilization, YuanQi-IAI Joint Laboratory for Agricultural Digital Twin, Institute of Agricultural Information, Jiangsu Academy of Agricultural Sciences, Nanjing, 210014, Jiangsu, China
- School of Agricultural Engineering, Jiangsu University, Zhenjiang, 212013, Jiangsu, China
| | - Yuyang Yao
- College of Electronics & Information Engineering, Nanjing University of Information Science and Technology, Nanjing, 210044, Jiangsu, China
| | - Hongxin Cao
- IGRB-IAI Joint Laboratory of Germplasm Resources Innovation & Information Utilization, YuanQi-IAI Joint Laboratory for Agricultural Digital Twin, Institute of Agricultural Information, Jiangsu Academy of Agricultural Sciences, Nanjing, 210014, Jiangsu, China.
| | - Wenyu Zhang
- IGRB-IAI Joint Laboratory of Germplasm Resources Innovation & Information Utilization, YuanQi-IAI Joint Laboratory for Agricultural Digital Twin, Institute of Agricultural Information, Jiangsu Academy of Agricultural Sciences, Nanjing, 210014, Jiangsu, China.
- School of Agricultural Engineering, Jiangsu University, Zhenjiang, 212013, Jiangsu, China.
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Si Z, Delhaize E, Hendriks PW, Li X. Differences in Root Morphologies of Contrasting Wheat ( Triticum aestivum) Genotypes Are Robust of a Drought Treatment. PLANTS (BASEL, SWITZERLAND) 2023; 12:275. [PMID: 36678988 PMCID: PMC9863919 DOI: 10.3390/plants12020275] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/26/2022] [Revised: 12/21/2022] [Accepted: 12/28/2022] [Indexed: 06/17/2023]
Abstract
We aimed to assess the effect of water deprivation on root traits and to establish if the wheat cultivars Spica and Maringa would be useful as parental germplasm for a genetic analysis of root traits. Plants were grown in two markedly different soils under well-watered and water-limited treatments in controlled environment growth cabinets. The drought treatment was imposed as a gradual depletion of water over 28 days as seedlings grew from a defined starting moisture content. The root traits analyzed included length, nodal root number, thickness and nodal root angle. The relative differences in traits between genotypes generally proved to be robust in terms of water treatment and soil type. Maringa had a shallower nodal root angle than Spica, which was driven by the nodal roots. By contrast, the seminal roots of Maringa were found to be similar to or even steeper than those of Spica. We conclude that the differences in root traits between Spica and Maringa were robust to the drought treatment and soil types. Phenotyping on well-watered soil is relevant for identifying traits potentially involved in conferring water use efficiency. Furthermore, Spica and Maringa are suitable parental germplasm for developing populations to determine the genetics of key root traits.
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Affiliation(s)
- Zhuanyun Si
- Key Laboratory of Crop Water Use and Regulation, Ministry of Agriculture and Rural Affairs/Institute of Farmland Irrigation, Chinese Academy of Agricultural Sciences, Xinxiang 453002, China
- CSIRO Agriculture and Food, Canberra, ACT 2601, Australia
| | - Emmanuel Delhaize
- Australian Plant Phenomics Facility, Research School of Biology, The Australian National University, Canberra, ACT 2600, Australia
| | - Pieter-Willem Hendriks
- CSIRO Agriculture and Food, Canberra, ACT 2601, Australia
- Faculty of Agriculture and Life Sciences, Lincoln University, 85084 Ellesmere Junction Road, Lincoln 7647, New Zealand
| | - Xiaoqing Li
- CSIRO Agriculture and Food, Canberra, ACT 2601, Australia
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10
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Clément C, Schneider HM, Dresbøll DB, Lynch JP, Thorup-Kristensen K. Root and xylem anatomy varies with root length, root order, soil depth and environment in intermediate wheatgrass (Kernza®) and alfalfa. ANNALS OF BOTANY 2022; 130:367-382. [PMID: 35468194 PMCID: PMC9486898 DOI: 10.1093/aob/mcac058] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/27/2022] [Accepted: 04/25/2022] [Indexed: 06/08/2023]
Abstract
BACKGROUND AND AIMS Deep roots (i.e. >1 m depth) are important for crops to access water when the topsoil is dry. Root anatomy and hydraulic conductance play important roles in the uptake of soil water, particularly water located deep in the soil. We investigated whether root and xylem anatomy vary as a function of root type, order and length, or with soil depth in roots of two deep-rooted perennial crops: intermediate wheatgrass [Thinopyrum intermedium (Kernza®)] and alfalfa (Medicago sativa). We linked the expression of these anatomical traits to the plants' capacity to take up water from deep soil layers. METHODS Using laser ablation tomography, we compared the roots of the two crops for cortical area, number and size of metaxylem vessels, and their estimated root axial hydraulic conductance (ERAHCe). The deepest roots investigated were located at soil depths of 2.25 and at 3.5 m in the field and in rhizoboxes, respectively. Anatomical differences were characterized along 1-m-long individual roots, among root types and orders, as well as between environmental conditions. KEY RESULTS For both crops, a decrease in the number and diameter, or both, of metaxylem vessels along individual root segments and with soil depth in the field resulted in a decrease in ERAHCe. Alfalfa, with a greater number of metaxylem vessels per root throughout the soil profile and, on average, a 4-fold greater ERAHCe, took up more water from the deep soil layers than intermediate wheatgrass. Root anatomical traits were significantly different across root types, classes and growth conditions. CONCLUSIONS Root anatomical traits are important tools for the selection of crops with enhanced exploitation of deep soil water. The development and breeding of perennial crops for improved subsoil exploitation will be aided by greater understanding of root phenotypes linked to deep root growth and activity.
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Affiliation(s)
| | - Hannah M Schneider
- Department of Plant Science, Pennsylvania State University, University Park, PA 16802, USA
| | - Dorte Bodin Dresbøll
- Department of Plant and Environmental Science, University of Copenhagen, 1871 Frederiksberg, Denmark
| | - Jonathan P Lynch
- Department of Plant Science, Pennsylvania State University, University Park, PA 16802, USA
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11
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Cai G, Tötzke C, Kaestner A, Ahmed MA. Quantification of root water uptake and redistribution using neutron imaging: a review and future directions. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2022; 111:348-359. [PMID: 35603461 DOI: 10.1111/tpj.15839] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/16/2021] [Revised: 05/12/2022] [Accepted: 05/19/2022] [Indexed: 06/15/2023]
Abstract
Quantifying root water uptake is essential to understanding plant water use and responses to different environmental conditions. However, non-destructive measurement of water transport and related hydraulics in the soil-root system remains a challenge. Neutron imaging, with its high sensitivity to hydrogen, has become an unparalleled tool to visualize and quantify root water uptake in vivo. In combination with isotopes (e.g., deuterated water) and a diffusion-convection model, root water uptake and hydraulic redistribution in root and soil can be quantified. Here, we review recent advances in utilizing neutron imaging to visualize and quantify root water uptake, hydraulic redistribution in roots and soil, and root hydraulic properties of different plant species. Under uniform soil moisture distributions, neutron radiographic studies have shown that water uptake was not uniform along the root and depended on both root type and age. For both tap (e.g., lupine [Lupinus albus L.]) and fibrous (e.g., maize [Zea mays L.]) root systems, water was mainly taken up through lateral roots. In mature maize, the location of water uptake shifted from seminal roots and their laterals to crown/nodal roots and their laterals. Under non-uniform soil moisture distributions, part of the water taken up during the daytime maintained the growth of crown/nodal roots in the upper, drier soil layers. Ultra-fast neutron tomography provides new insights into 3D water movement in soil and roots. We discuss the limitations of using neutron imaging and propose future directions to utilize neutron imaging to advance our understanding of root water uptake and soil-root interactions.
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Affiliation(s)
- Gaochao Cai
- Chair of Soil Physics, Bayreuth Center of Ecology and Environmental Research (BayCEER), University of Bayreuth, Universitätsstraße 30, 95447, Bayreuth, Germany
| | - Christian Tötzke
- Institute of Environmental Science and Geography, University of Potsdam, Karl-Liebknecht-Str. 24-25, 14476, Potsdam, Germany
| | - Anders Kaestner
- Laboratory for Neutron Scattering and Imaging, Paul Scherrer Institute, Forschungsstrasse 111, 5232, Villigen, Switzerland
| | - Mutez Ali Ahmed
- Chair of Soil Physics, Bayreuth Center of Ecology and Environmental Research (BayCEER), University of Bayreuth, Universitätsstraße 30, 95447, Bayreuth, Germany
- Department of Land, Air and Water Resources, University of California Davis, Davis, CA, 95616, USA
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12
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Meunier F, Couvreur V, Draye X, Lobet G, Huber K, Schroeder N, Jorda H, Koch A, Landl M, Schnepf A, Vanderborght J, Vereecken H, Javaux M. Investigating Soil-Root Interactions with the Numerical Model R-SWMS. Methods Mol Biol 2022; 2395:259-283. [PMID: 34822158 DOI: 10.1007/978-1-0716-1816-5_13] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
In this chapter, we present the Root and Soil Water Movement and Solute transport model R-SWMS, which can be used to simulate flow and transport in the soil-plant system. The equations describing water flow in soil-root systems are presented and numerical solutions are provided. An application of R-SWMS is then briefly discussed, in which we combine in vivo and in silico experiments in order to decrypt water flow in the soil-root domain. More precisely, light transmission imaging experiments were conducted to generate data that can serve as input for the R-SWMS model. These data include the root system architecture, the soil hydraulic properties and the environmental conditions (initial soil water content and boundary conditions, BC). Root hydraulic properties were not acquired experimentally, but set to theoretical values found in the literature. In order to validate the results obtained by the model, the simulated and experimental water content distributions were compared. The model was then used to estimate variables that were not experimentally accessible, such as the actual root water uptake distribution and xylem water potential.
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Affiliation(s)
- Félicien Meunier
- Earth and Life Institute/Environmental Sciences, Université catholique de Louvain, Louvain, Belgium
| | - Valentin Couvreur
- Earth and Life Institute/Environmental Sciences, Université catholique de Louvain, Louvain, Belgium
| | - Xavier Draye
- Earth and Life Institute/Environmental Sciences, Université catholique de Louvain, Louvain, Belgium
| | - Guillaume Lobet
- Earth and Life Institute/Environmental Sciences, Université catholique de Louvain, Louvain, Belgium
- Agrosphere (IBG-3), Forschungszentrum Juelich GmbH, Jülich, Germany
| | - Katrin Huber
- Agrosphere (IBG-3), Forschungszentrum Juelich GmbH, Jülich, Germany
| | - Nathalie Schroeder
- Earth and Life Institute/Environmental Sciences, Université catholique de Louvain, Louvain, Belgium
- Department of Hydromechanics and Modelling of Hydrosystems, University of Stuttgart, Stuttgart, Germany
| | - Helena Jorda
- Agrosphere (IBG-3), Forschungszentrum Juelich GmbH, Jülich, Germany
| | - Axelle Koch
- Earth and Life Institute/Environmental Sciences, Université catholique de Louvain, Louvain, Belgium
| | - Magdalena Landl
- Agrosphere (IBG-3), Forschungszentrum Juelich GmbH, Jülich, Germany
| | - Andrea Schnepf
- Agrosphere (IBG-3), Forschungszentrum Juelich GmbH, Jülich, Germany
| | - Jan Vanderborght
- Agrosphere (IBG-3), Forschungszentrum Juelich GmbH, Jülich, Germany
| | - Harry Vereecken
- Agrosphere (IBG-3), Forschungszentrum Juelich GmbH, Jülich, Germany
| | - Mathieu Javaux
- Earth and Life Institute/Environmental Sciences, Université catholique de Louvain, Louvain, Belgium.
- Agrosphere (IBG-3), Forschungszentrum Juelich GmbH, Jülich, Germany.
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13
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Kumar J, Sen Gupta D, Djalovic I, Kumar S, Siddique KHM. Root-omics for drought tolerance in cool-season grain legumes. PHYSIOLOGIA PLANTARUM 2021; 172:629-644. [PMID: 33314181 DOI: 10.1111/ppl.13313] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/29/2020] [Accepted: 12/02/2020] [Indexed: 06/12/2023]
Abstract
Root traits can be exploited to increase the physiological efficiency of crop water use under drought. Root length, root hairs, root branching, root diameter, and root proliferation rate are genetically defined traits that can help to improve the water productivity potential of crops. Recently, high-throughput phenotyping techniques/platforms have been used to screen the germplasm of major cool-season grain legumes for root traits and their impact on different physiological processes, including nutrient uptake and yield potential. Advances in omics approaches have led to the dissection of genomic, proteomic, and metabolomic structures of these traits. This knowledge facilitates breeders to improve the water productivity and nutrient uptake of cultivars under limited soil moisture conditions in major cool-season grain legumes that usually face terminal drought. This review discusses the advances in root traits and their potential for developing drought-tolerant cultivars in cool-season grain legumes.
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Affiliation(s)
- Jitendra Kumar
- Division of Crop Improvement, ICAR-Indian Institute of Pulses Research, Kanpur, India
| | - Debjyoti Sen Gupta
- Division of Crop Improvement, ICAR-Indian Institute of Pulses Research, Kanpur, India
| | - Ivica Djalovic
- Maize Department, Institute of Field and Vegetable Crops, Novi Sad, Serbia
| | - Shiv Kumar
- Biodiversity and Crop Improvement Program, International Centre for Agricultural Research in the Dry Areas (ICARDA), Rabat, Morocco
| | - Kadambot H M Siddique
- The UWA Institute of Agriculture and School of Agriculture and Environment, The University of Western Australia, Perth, Western Australia, Australia
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14
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Tötzke C, Kardjilov N, Hilger A, Rudolph-Mohr N, Manke I, Oswald SE. Three-dimensional in vivo analysis of water uptake and translocation in maize roots by fast neutron tomography. Sci Rep 2021; 11:10578. [PMID: 34012044 PMCID: PMC8134433 DOI: 10.1038/s41598-021-90062-4] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2020] [Accepted: 05/05/2021] [Indexed: 11/29/2022] Open
Abstract
Root water uptake is an essential process for terrestrial plants that strongly affects the spatiotemporal distribution of water in vegetated soil. Fast neutron tomography is a recently established non-invasive imaging technique capable to capture the 3D architecture of root systems in situ and even allows for tracking of three-dimensional water flow in soil and roots. We present an in vivo analysis of local water uptake and transport by roots of soil-grown maize plants-for the first time measured in a three-dimensional time-resolved manner. Using deuterated water as tracer in infiltration experiments, we visualized soil imbibition, local root uptake, and tracked the transport of deuterated water throughout the fibrous root system for a day and night situation. This revealed significant differences in water transport between different root types. The primary root was the preferred water transport path in the 13-days-old plants while seminal roots of comparable size and length contributed little to plant water supply. The results underline the unique potential of fast neutron tomography to provide time-resolved 3D in vivo information on the water uptake and transport dynamics of plant root systems, thus contributing to a better understanding of the complex interactions of plant, soil and water.
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Affiliation(s)
- Christian Tötzke
- Institute of Environmental Science and Geography, University of Potsdam, Potsdam, Germany.
| | - Nikolay Kardjilov
- Institute of Applied Materials, Helmholtz Centre for Materials and Energy, Berlin, Germany
| | - André Hilger
- Institute of Applied Materials, Helmholtz Centre for Materials and Energy, Berlin, Germany
| | - Nicole Rudolph-Mohr
- Institute of Environmental Science and Geography, University of Potsdam, Potsdam, Germany
| | - Ingo Manke
- Institute of Applied Materials, Helmholtz Centre for Materials and Energy, Berlin, Germany
| | - Sascha E Oswald
- Institute of Environmental Science and Geography, University of Potsdam, Potsdam, Germany
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15
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Nuixe M, Traoré AS, Blystone S, Bonny JM, Falcimagne R, Pagès G, Picon-Cochard C. Circadian Variation of Root Water Status in Three Herbaceous Species Assessed by Portable NMR. PLANTS (BASEL, SWITZERLAND) 2021; 10:782. [PMID: 33923406 PMCID: PMC8073897 DOI: 10.3390/plants10040782] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/15/2021] [Revised: 04/14/2021] [Accepted: 04/14/2021] [Indexed: 11/17/2022]
Abstract
Roots are at the core of plant water dynamics. Nonetheless, root morphology and functioning are not easily assessable without destructive approaches. Nuclear Magnetic Resonance (NMR), and particularly low-field NMR (LF-NMR), is an interesting noninvasive method to study water in plants, as measurements can be performed outdoors and independent of sample size. However, as far as we know, there are no reported studies dealing with the water dynamics in plant roots using LF-NMR. Thus, the aim of this study is to assess the feasibility of using LF-NMR to characterize root water status and water dynamics non-invasively. To achieve this goal, a proof-of-concept study was designed using well-controlled environmental conditions. NMR and ecophysiological measurements were performed continuously over one week on three herbaceous species grown in rhizotrons. The NMR parameters measured were either the total signal or the transverse relaxation time T2. We observed circadian variations of the total NMR signal in roots and in soil and of the root slow relaxing T2 value. These results were consistent with ecophysiological measurements, especially with the variation of fluxes between daytime and nighttime. This study assessed the feasibility of using LF-NMR to evaluate root water status in herbaceous species.
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Affiliation(s)
- Magali Nuixe
- INRAE, UR QuaPA, F-63122 Saint-Genès Champanelle, France; (M.N.); (S.B.); (J.-M.B.); (G.P.)
- INRAE, ISC AgroResonance, F-63122 Saint-Genès-Champanelle, France
- Université Clermont Auvergne, INRAE, VetAgro Sup, UREP, F-63000 Clermont-Ferrand, France;
| | - Amidou Sissou Traoré
- INRAE, UR QuaPA, F-63122 Saint-Genès Champanelle, France; (M.N.); (S.B.); (J.-M.B.); (G.P.)
- INRAE, ISC AgroResonance, F-63122 Saint-Genès-Champanelle, France
| | - Shannan Blystone
- INRAE, UR QuaPA, F-63122 Saint-Genès Champanelle, France; (M.N.); (S.B.); (J.-M.B.); (G.P.)
- INRAE, ISC AgroResonance, F-63122 Saint-Genès-Champanelle, France
- Université Clermont Auvergne, INRAE, VetAgro Sup, UREP, F-63000 Clermont-Ferrand, France;
| | - Jean-Marie Bonny
- INRAE, UR QuaPA, F-63122 Saint-Genès Champanelle, France; (M.N.); (S.B.); (J.-M.B.); (G.P.)
- INRAE, ISC AgroResonance, F-63122 Saint-Genès-Champanelle, France
| | - Robert Falcimagne
- Université Clermont Auvergne, INRAE, VetAgro Sup, UREP, F-63000 Clermont-Ferrand, France;
| | - Guilhem Pagès
- INRAE, UR QuaPA, F-63122 Saint-Genès Champanelle, France; (M.N.); (S.B.); (J.-M.B.); (G.P.)
- INRAE, ISC AgroResonance, F-63122 Saint-Genès-Champanelle, France
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16
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Rao S, Armstrong R, Silva-Perez V, Tefera AT, Rosewarne GM. Pulse Root Ideotype for Water Stress in Temperate Cropping System. PLANTS 2021; 10:plants10040692. [PMID: 33916833 PMCID: PMC8067327 DOI: 10.3390/plants10040692] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/08/2021] [Revised: 04/01/2021] [Accepted: 04/01/2021] [Indexed: 11/16/2022]
Abstract
Pulses are a key component of crop production systems in Southern Australia due to their rotational benefits and potential profit margins. However, cultivation in temperate cropping systems such as that of Southern Australia is limited by low soil water availability and subsoil constraints. This limitation of soil water is compounded by the irregular rainfall, resulting in the absence of plant available water at depth. An increase in the productivity of key pulses and expansion into environments and soil types traditionally considered marginal for their growth will require improved use of the limited soil water and adaptation to sub soil constrains. Roots serve as the interface between soil constraints and the whole plant. Changes in root system architecture (RSA) can be utilised as an adaptive strategy in achieving yield potential under limited rainfall, heterogenous distribution of resources and other soil-based constraints. The existing literature has identified a “‘Steep, Deep and Cheap” root ideotype as a preferred RSA. However, this idiotype is not efficient in a temperate system where plant available water is limited at depth. In addition, this root ideotype and other root architectural studies have focused on cereal crops, which have different structures and growth patterns to pulses due to their monocotyledonous nature and determinant growth habit. The paucity of pulse-specific root architectural studies warrants further investigations into pulse RSA, which should be combined with an examination of the existing variability of known genetic traits so as to develop strategies to alleviate production constraints through either tolerance or avoidance mechanisms. This review proposes a new model of root system architecture of “Wide, Shallow and Fine” roots based on pulse roots in temperate cropping systems. The proposed ideotype has, in addition to other root traits, a root density concentrated in the upper soil layers to capture in-season rainfall before it is lost due to evaporation. The review highlights the potential to achieve this in key pulse crops including chickpea, lentil, faba bean, field pea and lupin. Where possible, comparisons to determinate crops such as cereals have also been made. The review identifies the key root traits that have shown a degree of adaptation via tolerance or avoidance to water stress and documents the current known variability that exists in and amongst pulse crops setting priorities for future research.
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17
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De Bauw P, Mai TH, Schnepf A, Merckx R, Smolders E, Vanderborght J. A functional-structural model of upland rice root systems reveals the importance of laterals and growing root tips for phosphate uptake from wet and dry soils. ANNALS OF BOTANY 2020; 126:789-806. [PMID: 32597468 PMCID: PMC7489101 DOI: 10.1093/aob/mcaa120] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/14/2019] [Accepted: 06/22/2020] [Indexed: 05/22/2023]
Abstract
BACKGROUND AND AIMS Upland rice is often grown where water and phosphorus (P) are limited. To better understand the interaction between water and P availability, functional-structural models that mechanistically represent small-scale nutrient gradients and water dynamics in the rhizosphere are needed. METHODS Rice was grown in large columns using a P-deficient soil at three P supplies in the topsoil (deficient, sub-optimal and non-limiting) in combination with two water regimes (field capacity vs. drying periods). Root system characteristics, such as nodal root number, lateral types, interbranch distance, root diameters and the distribution of biomass with depth, as well as water and P uptake, were measured. Based on the observed root data, 3-D root systems were reconstructed by calibrating the structural architecure model CRootBox for each scenario. Water flow and P transport in the soil to each of the individual root segments of the generated 3-D root architectures were simulated using a multiscale flow and transport model. Total water and P uptake were then computed by adding up the uptake by all the root segments. KEY RESULTS Measurements showed that root architecture was significantly affected by the treatments. The moist, high P scenario had 2.8 times the root mass, double the number of nodal roots and more S-type laterals than the dry, low P scenario. Likewise, measured plant P uptake increased >3-fold by increasing P and water supply. However, drying periods reduced P uptake at high but not at low P supply. Simulation results adequately predicted P uptake in all scenarios when the Michaelis-Menten constant (Km) was corrected for diffusion limitation. They showed that the key drivers for P uptake are the different types of laterals (i.e. S- and L-type) and growing root tips. The L-type laterals become more important for overall water and P uptake than the S-type laterals in the dry scenarios. This is true across all the P treatments, but the effect is more pronounced as the P availability decreases. CONCLUSIONS This functional-structural model can predict the function of specific rice roots in terms of P and water uptake under different P and water supplies, when the structure of the root system is known. A future challenge is to predict how the structure root systems responds to nutrient and water availability.
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Affiliation(s)
- Pieterjan De Bauw
- Katholieke Universiteit Leuven, Department of of Earth and Environmental Sciences, Leuven, Belgium
| | - Trung Hieu Mai
- Institute of Bio- and Geosciences: Agrosphere (IBG 3), Forschungszentrum Jülich GmbH, Jülich, Germany
| | - Andrea Schnepf
- Institute of Bio- and Geosciences: Agrosphere (IBG 3), Forschungszentrum Jülich GmbH, Jülich, Germany
| | - Roel Merckx
- Katholieke Universiteit Leuven, Department of of Earth and Environmental Sciences, Leuven, Belgium
| | - Erik Smolders
- Katholieke Universiteit Leuven, Department of of Earth and Environmental Sciences, Leuven, Belgium
| | - Jan Vanderborght
- Institute of Bio- and Geosciences: Agrosphere (IBG 3), Forschungszentrum Jülich GmbH, Jülich, Germany
- Katholieke Universiteit Leuven, Department of of Earth and Environmental Sciences, Leuven, Belgium
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18
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CLARK T, BURCA G, BOARDMAN R, BLUMENSATH T. Correlative X‐ray and neutron tomography of root systems using cadmium fiducial markers. J Microsc 2020; 277:170-178. [DOI: 10.1111/jmi.12831] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2019] [Revised: 09/10/2019] [Accepted: 09/17/2019] [Indexed: 11/29/2022]
Affiliation(s)
- T. CLARK
- Faculty of Engineering and Physical SciencesUniversity of Southampton UK
- STFC, Rutherford Appleton LaboratoryISIS Facility Harwell UK
| | - G. BURCA
- STFC, Rutherford Appleton LaboratoryISIS Facility Harwell UK
| | - R. BOARDMAN
- μ‐VIS X‐ray Imaging CentreUniversity of Southampton UK
| | - T. BLUMENSATH
- ISVR Signal Processing and Control GroupUniversity of Southampton UK
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19
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Singh D, Mathimaran N, Boller T, Kahmen A. Deep-rooted pigeon pea promotes the water relations and survival of shallow-rooted finger millet during drought-Despite strong competitive interactions at ambient water availability. PLoS One 2020; 15:e0228993. [PMID: 32053664 PMCID: PMC7018066 DOI: 10.1371/journal.pone.0228993] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/17/2019] [Accepted: 01/28/2020] [Indexed: 12/03/2022] Open
Abstract
Bioirrigation has been defined as the transfer of hydraulically lifted water by a deep-rooted plant to a neighbouring shallow-rooted plant which cannot access deep soil moisture. In this study, we tested if facilitative effects of bioirrigation or the competition for water dominate the interaction of two intercropped plants-deep-rooted pigeon pea (PP) and shallow-rooted finger millet (FM) before and during a drought. Additionally, we tested how the presence of a common mycorrhizal network (CMN) affects the balance between facilitative (i.e. bioirrigation) and competitive interactions between two intercropping species. Our results show that PP can indeed promote the water relations of FM during a drought event. Specifically, stomatal conductance in FM controls dropped to low values of 27.1 to 33.6 mmol m-2s-1, while FM in intercropping treatments were able to maintain its stomatal conductance at 60 mmol m-2s-1. In addition, the presence of PP reduced the drought-induced foliar damage and mortality of FM. The observed facilitative effects of PP on FM were partially enhanced by the presence of a CMN. In contrast to the facilitative effects under drought, PP exerted strong competitive effects on FM before the onset of drought. This hindered growth and biomass production of FM when intercropped with PP, an effect that was even enhanced in the presence of a CMN. The results from our study thus indicate that in intercropping, deep-rooted plants may act as "bioirrigators" for shallow-rooted crops and that a CMN can promote these facilitative effects. However, the interspecific competition between the intercropped plants under conditions of abundant moisture supply can be strong and are enhanced by the presence of a CMN. In more general terms, our study shows that the extent by which the antagonistic effects of facilitation and competition are expressed in an intercropping system strongly depends on the availability of resources, which in the case of the present study was water and the presence of biotic interactions (i.e. the presence of a CMN).
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Affiliation(s)
- Devesh Singh
- Department of Environmental Science–Botany, University of Basel, Basel, Switzerland
| | - Natarajan Mathimaran
- Department of Environmental Science–Botany, University of Basel, Basel, Switzerland
| | - Thomas Boller
- Department of Environmental Science–Botany, University of Basel, Basel, Switzerland
| | - Ansgar Kahmen
- Department of Environmental Science–Botany, University of Basel, Basel, Switzerland
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20
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Rodriguez-Dominguez CM, Brodribb TJ. Declining root water transport drives stomatal closure in olive under moderate water stress. THE NEW PHYTOLOGIST 2020; 225:126-134. [PMID: 31498457 DOI: 10.1111/nph.16177] [Citation(s) in RCA: 74] [Impact Index Per Article: 18.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/10/2019] [Accepted: 09/01/2019] [Indexed: 05/24/2023]
Abstract
Efficient water transport from soil to leaves sustains stomatal opening and steady-state photosynthesis. The aboveground portion of this pathway is well-described, yet the roots and their connection with the soil are still poorly understood due to technical limitations. Here we used a novel rehydration technique to investigate changes in the hydraulic pathway between roots and soil and within the plant body as individual olive plants were subjected to a range of water stresses. Whole root hydraulic resistance (including the radial pathway from xylem to the soil-root interface) constituted 81% of the whole-plant resistance in unstressed plants, increasing to > 95% under a moderate level of water stress. The decline in this whole root hydraulic conductance occurred in parallel with stomatal closure and contributed significantly to the reduction in canopy conductance according to a hydraulic model. Our results demonstrate that losses in root hydraulic conductance, mainly due to a disconnection from the soil during moderate water stress in olive plants, are profound and sufficient to induce stomatal closure before cavitation occurs. Future studies will determine whether this core regulatory role of root hydraulics exists more generally among diverse plant species.
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Affiliation(s)
- Celia M Rodriguez-Dominguez
- Irrigation and Crop Ecophysiology Group, Instituto de Recursos Naturales y Agrobiología de Sevilla (IRNAS, CSIC), Avenida Reina Mercedes, 10, 41012, Sevilla, Spain
- School of Biological Sciences, University of Tasmania, Private Bag 55, Hobart, TAS, 7001, Australia
| | - Timothy J Brodribb
- School of Biological Sciences, University of Tasmania, Private Bag 55, Hobart, TAS, 7001, Australia
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21
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Schneider HM, Postma JA, Kochs J, Pflugfelder D, Lynch JP, van Dusschoten D. Spatio-Temporal Variation in Water Uptake in Seminal and Nodal Root Systems of Barley Plants Grown in Soil. FRONTIERS IN PLANT SCIENCE 2020; 11:1247. [PMID: 32903494 PMCID: PMC7438553 DOI: 10.3389/fpls.2020.01247] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/16/2020] [Accepted: 07/29/2020] [Indexed: 05/11/2023]
Abstract
The spatial and temporal dynamics of root water uptake in nodal and seminal roots are poorly understood, especially in relation to root system development and aging. Here we non-destructively quantify 1) root water uptake and 2) root length of nodal and seminal roots of barley in three dimensions during 43 days of growth. We developed a concentric split root system to hydraulically and physically isolate the seminal and nodal root systems. Using magnetic resonance imaging (MRI), roots were visualized, root length was determined, and soil water depletion in both compartments was measured. From 19 days after germination and onwards, the nodal root system had greater water uptake compared to the seminal root system due to both greater root length and greater root conductivity. At 29 days after germination onwards, the average age of the seminal and nodal root systems was similar and no differences were observed in water uptake per root length between seminal and nodal root systems, indicating the importance of embryonic root systems for seedling establishment and nodal root systems in more mature plants. Since nodal roots perform the majority of water uptake at 29 days after germination and onwards, nodal root phenes merit consideration as a selection target to improve water capture in barley and possibly other crops.
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Affiliation(s)
- Hannah M. Schneider
- Forschungszentrum Jülich, IBG-2, Jülich, Germany
- Department of Plant Science, The Pennsylvania State University, University Park, PA, United States
| | | | | | | | - Jonathan P. Lynch
- Department of Plant Science, The Pennsylvania State University, University Park, PA, United States
| | - Dagmar van Dusschoten
- Forschungszentrum Jülich, IBG-2, Jülich, Germany
- *Correspondence: Dagmar van Dusschoten,
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22
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Cejas CM, Hough LA, Beaufret R, Castaing JC, Frétigny C, Dreyfus R. Preferential Root Tropisms in 2D Wet Granular Media with Structural Inhomogeneities. Sci Rep 2019; 9:14195. [PMID: 31578384 PMCID: PMC6775086 DOI: 10.1038/s41598-019-50653-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2019] [Accepted: 09/17/2019] [Indexed: 11/23/2022] Open
Abstract
We investigate certain aspects of the physical mechanisms of root growth in a granular medium and how these roots adapt to changes in water distribution induced by the presence of structural inhomogeneities in the form of solid intrusions. Physical intrusions such as a square rod added into the 2D granular medium maintain robust capillary action, pumping water from the more saturated areas at the bottom of the cell towards the less saturated areas near the top of the cell while the rest of the medium is slowly devoid of water via evaporation. The intrusion induces "preferential tropism" of roots by first generating a humidity gradient that attracts the root to grow towards it. Then it guides the roots and permits them to grow deeper into more saturated regions in the soil. This further allows more efficient access to available water in the deeper sections of the medium thereby resulting to increased plant lifetime.
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Affiliation(s)
- Cesare M Cejas
- Complex Assemblies of Soft Matter, CNRS-Solvay-UPenn UMI 3254, Bristol, PA, 19007-3624, USA.
- Microfluidics, MEMS, Nanostructures Laboratory, CNRS Chimie Biologie Innovation (CBI) UMR 8231, Institut Pierre Gilles de Gennes (IPGG), ESPCI Paris, PSL Research University, 6 rue Jean Calvin, Paris, 75005, France.
| | - Lawrence A Hough
- Complex Assemblies of Soft Matter, CNRS-Solvay-UPenn UMI 3254, Bristol, PA, 19007-3624, USA
| | - Raphaël Beaufret
- Complex Assemblies of Soft Matter, CNRS-Solvay-UPenn UMI 3254, Bristol, PA, 19007-3624, USA
| | | | - Christian Frétigny
- Sciences et Ingénierie de la Matière Molle (SIMM) CNRS UMR 7615 ESPCI, 10 rue Vauquelin, Paris, 75005, France
| | - Rémi Dreyfus
- Complex Assemblies of Soft Matter, CNRS-Solvay-UPenn UMI 3254, Bristol, PA, 19007-3624, USA
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Root water uptake and its pathways across the root: quantification at the cellular scale. Sci Rep 2019; 9:12979. [PMID: 31506538 PMCID: PMC6737181 DOI: 10.1038/s41598-019-49528-9] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2019] [Accepted: 08/27/2019] [Indexed: 11/09/2022] Open
Abstract
The pathways of water across root tissues and their relative contribution to plant water uptake remain debated. This is mainly due to technical challenges in measuring water flux non-invasively at the cellular scale under realistic conditions. We developed a new method to quantify water fluxes inside roots growing in soils. The method combines spatiotemporal quantification of deuterated water distribution imaged by rapid neutron tomography with an inverse simulation of water transport across root tissues. Using this non-invasive technique, we estimated for the first time the in-situ radial water fluxes [m s−1] in apoplastic and cell-to-cell pathways. The water flux in the apoplast of twelve days-old lupins (Lupinus albus L. cv. Feodora) was seventeen times faster than in the cell-to-cell pathway. Hence, the overall contribution of the apoplast in water flow [m3 s−1] across the cortex is, despite its small volume of 5%, as large as 57 ± 8% (Mean ± SD for n = 3) of the total water flow. This method is suitable to non-invasively measure the response of cellular scale root hydraulics and water fluxes to varying soil and climate conditions.
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24
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Sevanto S. Methods for Assessing the Role of Phloem Transport in Plant Stress Responses. Methods Mol Biol 2019; 2014:311-336. [PMID: 31197806 DOI: 10.1007/978-1-4939-9562-2_25] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/16/2023]
Abstract
Delivery of carbohydrates to tissues that need them under stress is important for plant defenses and survival. Yet, little is known on how phloem function is altered under stress, and how that influences plant responses to stress. This is because phloem is a challenging tissue to study. It consists of cells of various types with soft cell walls, and the cells show strong wounding reactions to protect their integrity, making both imaging and functional studies challenging. This chapter summarizes theories on how phloem transport is affected by stress and presents methods that have been used to gain the current knowledge. These techniques range from tracer studies and imaging to carbon balance and anatomical analyses. Advances in these techniques in the recent years have considerably increased our ability to investigate phloem function, and application of the new methods on plant stress studies will help provide a more comprehensive picture of phloem function and its limitations under stress.
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Affiliation(s)
- Sanna Sevanto
- Earth and Environmental Sciences Division, Los Alamos National Laboratory, Los Alamos, NM, USA.
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25
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Koch A, Meunier F, Vanderborght J, Garré S, Pohlmeier A, Javaux M. Functional-structural root-system model validation using a soil MRI experiment. JOURNAL OF EXPERIMENTAL BOTANY 2019; 70:2797-2809. [PMID: 30799498 PMCID: PMC6509106 DOI: 10.1093/jxb/erz060] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/22/2018] [Accepted: 02/05/2019] [Indexed: 05/04/2023]
Abstract
For the first time, a functional-structural root-system model is validated by combining a tracer experiment monitored with magnetic resonance imaging and three-dimensional modeling of water and solute transport.
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Affiliation(s)
- Axelle Koch
- Earth and Life Institute – Environmental Sciences, UCLouvain, Louvain-la-Neuve, Belgium
| | - Félicien Meunier
- Earth and Life Institute – Environmental Sciences, UCLouvain, Louvain-la-Neuve, Belgium
- Computational and Applied Vegetation Ecology Lab, Ghent University, Ghent, Belgium
| | - Jan Vanderborght
- Institute of Bio- and Geosciences, IBG-3 Agrosphere, Forschungszentrum Jülich GmbH, Jülich, Germany
- Earth and Environmental Sciences, KU Leuven, Celestijnenlaan, Leuven, Belgium
| | - Sarah Garré
- Gembloux Agro-Bio Tech, Université de Liège, Passage des déportés, Gembloux, Belgium
| | - Andreas Pohlmeier
- Institute of Bio- and Geosciences, IBG-3 Agrosphere, Forschungszentrum Jülich GmbH, Jülich, Germany
| | - Mathieu Javaux
- Earth and Life Institute – Environmental Sciences, UCLouvain, Louvain-la-Neuve, Belgium
- Institute of Bio- and Geosciences, IBG-3 Agrosphere, Forschungszentrum Jülich GmbH, Jülich, Germany
- Correspondence:
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26
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Brodersen CR, Roddy AB, Wason JW, McElrone AJ. Functional Status of Xylem Through Time. ANNUAL REVIEW OF PLANT BIOLOGY 2019; 70:407-433. [PMID: 30822114 DOI: 10.1146/annurev-arplant-050718-100455] [Citation(s) in RCA: 38] [Impact Index Per Article: 7.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
Water transport in vascular plants represents a critical component of terrestrial water cycles and supplies the water needed for the exchange of CO2 in the atmosphere for photosynthesis. Yet, many fundamental principles of water transport are difficult to assess given the scale and location of plant xylem. Here we review the mechanistic principles that underpin long-distance water transport in vascular plants, with a focus on woody species. We also discuss the recent development of noninvasive tools to study the functional status of xylem networks in planta. Limitations of current methods to detect drought-induced xylem blockages (e.g., embolisms) and quantify corresponding declines in sap flow, and the coordination of hydraulic dysfunction with other physiological processes are assessed. Future avenues of research focused on cross-validation of plant hydraulics methods are discussed, as well as a proposed fundamental shift in the theory and methodology used to characterize and measure plant water use.
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Affiliation(s)
- Craig R Brodersen
- School of Forestry and Environmental Studies, Yale University, New Haven, Connecticut 06511, USA;
| | - Adam B Roddy
- School of Forestry and Environmental Studies, Yale University, New Haven, Connecticut 06511, USA;
| | - Jay W Wason
- School of Forest Resources, University of Maine, Orono, Maine 04469, USA
| | - Andrew J McElrone
- US Department of Agriculture, Agricultural Research Service, Davis, California 95616, USA
- Department of Viticulture and Enology, University of California, Davis, California 95616, USA
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27
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Bouda M, Brodersen C, Saiers J. Whole root system water conductance responds to both axial and radial traits and network topology over natural range of trait variation. J Theor Biol 2018; 456:49-61. [PMID: 30055183 DOI: 10.1016/j.jtbi.2018.07.033] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2017] [Revised: 05/30/2018] [Accepted: 07/24/2018] [Indexed: 01/16/2023]
Abstract
Current theory and supporting research suggests that radial transport is the most limiting factor to root water uptake, raising the question whether only absorbing root length and radial conductivity matter to water uptake. Here, we extended the porous pipe analytical model of root water uptake to entire root networks in 3D and analysed the relative importance of axial and radial characteristics to total uptake over parameter ranges reported in the literature. We found that network conductance can be more sensitive to axial than radial conductance of absorbing roots. When axial transport limits uptake, more dichotomous topology, especially towards the base of the network, increases water uptake efficiency, while the effect of root length is reduced. Whole root system conductance was sensitive to radial transport and length in model lupin (Lupinus angustifolius L.), but to axial transport and topology in wheat (Triticum aestivum L.), suggesting the root habit niche space of monocots may be constrained by their loss of secondary growth. A deep tap root calibrated to oak (Quercus fusiformis J. Buchholz) hydraulic parameters required 15 times more xylem volume to transport comparable amounts of water once recalibrated to parameters from juniper (Juniperus ashei Small 1901), showing that anatomical constraints on axial conductance can lead to significant trade-offs in woody roots as well. Root system water uptake responds to axial transport and can be limited by it in a biologically meaningful way.
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Affiliation(s)
- Martin Bouda
- School of Forestry and Environmental Studies, Yale University, 370 Prospect St., New Haven, CT, USA.
| | - Craig Brodersen
- School of Forestry and Environmental Studies, Yale University, 370 Prospect St., New Haven, CT, USA
| | - James Saiers
- School of Forestry and Environmental Studies, Yale University, 370 Prospect St., New Haven, CT, USA
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28
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BURCA G, NAGELLA S, CLARK T, TASEV D, RAHMAN I, GARWOOD R, SPENCER A, TURNER M, KELLEHER J. Exploring the potential of neutron imaging for life sciences on IMAT. J Microsc 2018; 272:242-247. [DOI: 10.1111/jmi.12761] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/06/2018] [Revised: 09/13/2018] [Accepted: 09/28/2018] [Indexed: 10/28/2022]
Affiliation(s)
- G. BURCA
- STFC; Rutherford Appleton Laboratory, ISIS Facility; Harwell UK
| | - S. NAGELLA
- Scientific Computing Department; Rutherford Appleton Laboratory; STFC; Harwell UK
| | - T. CLARK
- STFC; Rutherford Appleton Laboratory, ISIS Facility; Harwell UK
- Bioengineering Sciences Research Group; Faculty of Engineering and the Environment, University of Southampton; Southampton UK
| | - D. TASEV
- Department of Computer Science; Aberystwyth University; Aberystwyth UK
| | - I.A. RAHMAN
- Oxford University Museum of Natural History; University of Oxford; Oxford UK
| | - R.J. GARWOOD
- School of Earth and Environmental Sciences; The University of Manchester; Manchester UK
- Department of Earth Sciences; The Natural History Museum London; London UK
| | - A.R.T. SPENCER
- Department of Earth Sciences; The Natural History Museum London; London UK
- Department of Earth Science and Engineering; Imperial College London; London UK
| | - M.J. TURNER
- Scientific Computing Department; Rutherford Appleton Laboratory; STFC; Harwell UK
- School of Computer Science; The University of Manchester; Manchester UK
| | - J.F. KELLEHER
- STFC; Rutherford Appleton Laboratory, ISIS Facility; Harwell UK
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29
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Cuneo IF, Knipfer T, Mandal P, Brodersen CR, McElrone AJ. Water uptake can occur through woody portions of roots and facilitates localized embolism repair in grapevine. THE NEW PHYTOLOGIST 2018; 218:506-516. [PMID: 29460963 DOI: 10.1111/nph.15032] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/04/2017] [Accepted: 12/23/2017] [Indexed: 06/08/2023]
Abstract
Water acquisition is thought to be limited to the unsuberized surface located close to root tips. However, there are recurring periods when the unsuberized surfaces are limited in woody root systems, and radial water uptake across the bark of woody roots might play an important physiological role in hydraulic functioning. Using X-ray microcomputed tomography (microCT) and hydraulic conductivity measurements (Lpr ), we examined water uptake capacity of suberized woody roots in vivo and in excised samples. Bark hydration in grapevine woody roots occurred quickly upon exposure to water (c. 4 h). Lpr measurements through the bark of woody roots showed that it is permeable to water and becomes more so upon wetting. After bark hydration, microCT analysis showed that absorbed water was utilized to remove embolism locally, where c. 20% of root xylem vessels refilled completely within 15 h. Embolism removal did not occur in control roots without water. Water uptake through the bark of woody roots probably plays an important role when unsuberized tissue is scarce/absent, and would be particularly relevant following large irrigation events or in late winter when soils are saturated, re-establishing hydraulic functionality before bud break.
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Affiliation(s)
- Italo F Cuneo
- Escuela de Agronomía, Pontificia Universidad Católica de Valparaíso, Quillota 2260000, Chile
| | - Thorsten Knipfer
- Department of Viticulture and Enology, University of California, Davis, CA 95618, USA
| | - Pratiti Mandal
- Advanced Light Source, Lawrence Berkeley Laboratory, Berkeley, CA 94720, USA
| | - Craig R Brodersen
- School of Forestry & Environmental Studies, Yale University, New Haven, CT 06511, USA
| | - Andrew J McElrone
- Department of Viticulture and Enology, University of California, Davis, CA 95618, USA
- Crops Pathology and Genetics Research Unit, USDA-ARS, Davis, CA 95618, USA
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30
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Kim YX, Ranathunge K, Lee S, Lee Y, Lee D, Sung J. Composite Transport Model and Water and Solute Transport across Plant Roots: An Update. FRONTIERS IN PLANT SCIENCE 2018; 9:193. [PMID: 29503659 PMCID: PMC5820301 DOI: 10.3389/fpls.2018.00193] [Citation(s) in RCA: 32] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/04/2017] [Accepted: 02/01/2018] [Indexed: 05/19/2023]
Abstract
The present review examines recent experimental findings in root transport phenomena in terms of the composite transport model (CTM). It has been a well-accepted conceptual model to explain the complex water and solute flows across the root that has been related to the composite anatomical structure. There are three parallel pathways involved in the transport of water and solutes in roots - apoplast, symplast, and transcellular paths. The role of aquaporins (AQPs), which facilitate water flows through the transcellular path, and root apoplast is examined in terms of the CTM. The contribution of the plasma membrane bound AQPs for the overall water transport in the whole plant level was varying depending on the plant species, age of roots with varying developmental stages of apoplastic barriers, and driving forces (hydrostatic vs. osmotic). Many studies have demonstrated that the apoplastic barriers, such as Casparian bands in the primary anticlinal walls and suberin lamellae in the secondary cell walls, in the endo- and exodermis are not perfect barriers and unable to completely block the transport of water and some solute transport into the stele. Recent research on water and solute transport of roots with and without exodermis triggered the importance of the extension of conventional CTM adding resistances that arrange in series (epidermis, exodermis, mid-cortex, endodermis, and pericycle). The extension of the model may answer current questions about the applicability of CTM for composite water and solute transport of roots that contain complex anatomical structures with heterogeneous cell layers.
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Affiliation(s)
- Yangmin X. Kim
- Division of Soil and Fertilizer, National Institute of Agricultural Sciences, Rural Development Administration, Wanju, South Korea
| | - Kosala Ranathunge
- School of Biological Sciences, The University of Western Australia, Perth, WA, Australia
| | - Seulbi Lee
- Division of Soil and Fertilizer, National Institute of Agricultural Sciences, Rural Development Administration, Wanju, South Korea
| | - Yejin Lee
- Division of Soil and Fertilizer, National Institute of Agricultural Sciences, Rural Development Administration, Wanju, South Korea
| | - Deogbae Lee
- Division of Soil and Fertilizer, National Institute of Agricultural Sciences, Rural Development Administration, Wanju, South Korea
| | - Jwakyung Sung
- Division of Soil and Fertilizer, National Institute of Agricultural Sciences, Rural Development Administration, Wanju, South Korea
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31
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Helliwell JR, Sturrock CJ, Mairhofer S, Craigon J, Ashton RW, Miller AJ, Whalley WR, Mooney SJ. The emergent rhizosphere: imaging the development of the porous architecture at the root-soil interface. Sci Rep 2017; 7:14875. [PMID: 29093533 PMCID: PMC5665926 DOI: 10.1038/s41598-017-14904-w] [Citation(s) in RCA: 62] [Impact Index Per Article: 8.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/12/2017] [Accepted: 10/17/2017] [Indexed: 11/10/2022] Open
Abstract
The rhizosphere is the zone of soil influenced by a plant root and is critical for plant health and nutrient acquisition. All below ground resources must pass through this dynamic zone prior to their capture by plant roots. However, researching the undisturbed rhizosphere has proved very challenging. Here we compare the temporal changes to the intact rhizosphere pore structure during the emergence of a developing root system in different soils. High resolution X-ray Computed Tomography (CT) was used to quantify the impact of root development on soil structural change, at scales relevant to individual micro-pores and aggregates (µm). A comparison of micro-scale structural evolution in homogenously packed soils highlighted the impacts of a penetrating root system in changing the surrounding porous architecture and morphology. Results indicate the structural zone of influence of a root can be more localised than previously reported (µm scale rather than mm scale). With time, growing roots significantly alter the soil physical environment in their immediate vicinity through reducing root-soil contact and crucially increasing porosity at the root-soil interface and not the converse as has often been postulated. This 'rhizosphere pore structure' and its impact on associated dynamics are discussed.
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Affiliation(s)
- J R Helliwell
- Division of Agricultural and Environmental Sciences, Gateway Building, Sutton Bonington Campus, University of Nottingham, Leicestershire, LE12 5RD, UK
- Sustainable Soils and Grassland Systems Department, Rothamsted Research, West Common, Harpenden, Hertfordshire, AL5 2JQ, UK
| | - C J Sturrock
- Division of Agricultural and Environmental Sciences, Gateway Building, Sutton Bonington Campus, University of Nottingham, Leicestershire, LE12 5RD, UK
| | - S Mairhofer
- Division of Agricultural and Environmental Sciences, Gateway Building, Sutton Bonington Campus, University of Nottingham, Leicestershire, LE12 5RD, UK
| | - J Craigon
- Division of Agricultural and Environmental Sciences, Gateway Building, Sutton Bonington Campus, University of Nottingham, Leicestershire, LE12 5RD, UK
| | - R W Ashton
- Sustainable Soils and Grassland Systems Department, Rothamsted Research, West Common, Harpenden, Hertfordshire, AL5 2JQ, UK
| | - A J Miller
- Metabolic Biology, John Innes Centre, Norwich Research Park, Norwich, NR4 7UH, UK
| | - W R Whalley
- Sustainable Soils and Grassland Systems Department, Rothamsted Research, West Common, Harpenden, Hertfordshire, AL5 2JQ, UK
| | - S J Mooney
- Division of Agricultural and Environmental Sciences, Gateway Building, Sutton Bonington Campus, University of Nottingham, Leicestershire, LE12 5RD, UK.
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32
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Ndour A, Vadez V, Pradal C, Lucas M. Virtual Plants Need Water Too: Functional-Structural Root System Models in the Context of Drought Tolerance Breeding. FRONTIERS IN PLANT SCIENCE 2017; 8:1577. [PMID: 29018456 PMCID: PMC5622977 DOI: 10.3389/fpls.2017.01577] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/01/2016] [Accepted: 08/29/2017] [Indexed: 05/04/2023]
Abstract
Developing a sustainable agricultural model is one of the great challenges of the coming years. The agricultural practices inherited from the Green Revolution of the 1960s show their limits today, and new paradigms need to be explored to counter rising issues such as the multiplication of climate-change related drought episodes. Two such new paradigms are the use of functional-structural plant models to complement and rationalize breeding approaches and a renewed focus on root systems as untapped sources of plant amelioration. Since the late 1980s, numerous functional and structural models of root systems were developed and used to investigate the properties of root systems in soil or lab-conditions. In this review, we focus on the conception and use of such root models in the broader context of research on root-driven drought tolerance, on the basis of root system architecture (RSA) phenotyping. Such models result from the integration of architectural, physiological and environmental data. Here, we consider the different phenotyping techniques allowing for root architectural and physiological study and their limits. We discuss how QTL and breeding studies support the manipulation of RSA as a way to improve drought resistance. We then go over the integration of the generated data within architectural models, how those architectural models can be coupled with functional hydraulic models, and how functional parameters can be measured to feed those models. We then consider the assessment and validation of those hydraulic models through confrontation of simulations to experimentations. Finally, we discuss the up and coming challenges facing root systems functional-structural modeling approaches in the context of breeding.
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Affiliation(s)
- Adama Ndour
- Laboratoire Mixte International Adaptation des Plantes et Microorganismes Associés Aux Stress Environnementaux (LAPSE), Dakar, Senegal
- Laboratoire Commun de Microbiologie (IRD-ISRA-UCAD), Dakar, Senegal
- CERES, IRD, Université de Montpellier, UMR DIADE, Montpellier, France
- Département Maths/Informatique, Faculté des Sciences et Techniques, Université Cheikh Anta Diop, Dakar, Senegal
| | - Vincent Vadez
- International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Patancheru, India
| | - Christophe Pradal
- UMR AGAP, Univiversité de Montpellier, CIRAD, INRA, Inria, Montpellier SupAgro, Montpellier, France
| | - Mikaël Lucas
- Laboratoire Mixte International Adaptation des Plantes et Microorganismes Associés Aux Stress Environnementaux (LAPSE), Dakar, Senegal
- Laboratoire Commun de Microbiologie (IRD-ISRA-UCAD), Dakar, Senegal
- CERES, IRD, Université de Montpellier, UMR DIADE, Montpellier, France
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33
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Realini M, Colombo C, Conti C, Grazzi F, Perelli Cippo E, Hovind J. Development of neutron imaging quantitative data treatment to assess conservation products in cultural heritage. Anal Bioanal Chem 2017; 409:6133-6139. [PMID: 28808737 DOI: 10.1007/s00216-017-0550-0] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2017] [Revised: 07/06/2017] [Accepted: 07/26/2017] [Indexed: 11/30/2022]
Abstract
Distribution, penetration depth and amount of new mineralogical phases formed after the interaction between an inorganic treatment and a matrix are key factors for the evaluation of the conservation treatment behaviour. Nowadays, the conventional analytical methodologies, such as vibrational spectroscopies, scanning electron microscopy and X-ray diffraction, provide only qualitative and spot information. Here, we report, for the first time, the proof of concept of a methodology based on neutron imaging able to achieve quantitative data useful to assess the formation of calcium oxalate in a porous carbonatic stone treated with ammonium oxalate. Starting from the neutron attenuation coefficient of Noto stone-treated specimens, the concentrations of newly formed calcium oxalate and the diffusion coefficient have been calculated for both sound and decayed substrates. These outcomes have been also used for a comparative study between different treatment modalities. Graphical abstract Horizontal slice at 300 mm depth and CaOx molar density profile by NEUTRA output.
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Affiliation(s)
- Marco Realini
- CNR, Istituto per la Conservazione e la Valorizzazione dei Beni Culturali (ICVBC), Via Cozzi 53, 20125, Milan, Italy.
| | - Chiara Colombo
- CNR, Istituto per la Conservazione e la Valorizzazione dei Beni Culturali (ICVBC), Via Cozzi 53, 20125, Milan, Italy
| | - Claudia Conti
- CNR, Istituto per la Conservazione e la Valorizzazione dei Beni Culturali (ICVBC), Via Cozzi 53, 20125, Milan, Italy
| | - Francesco Grazzi
- CNR, Istituto dei Sistemi Complessi (ISC), Via Madonna del Piano, 10, 50019, Sesto Fiorentino (FI), Italy
| | | | - Jan Hovind
- Paul Scherrer Institute, 5232, Villigen PSI, Switzerland
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34
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Tötzke C, Kardjilov N, Manke I, Oswald SE. Capturing 3D Water Flow in Rooted Soil by Ultra-fast Neutron Tomography. Sci Rep 2017; 7:6192. [PMID: 28733616 PMCID: PMC5522441 DOI: 10.1038/s41598-017-06046-w] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2017] [Accepted: 06/05/2017] [Indexed: 11/09/2022] Open
Abstract
Water infiltration in soil is not only affected by the inherent heterogeneities of soil, but even more by the interaction with plant roots and their water uptake. Neutron tomography is a unique non-invasive 3D tool to visualize plant root systems together with the soil water distribution in situ. So far, acquisition times in the range of hours have been the major limitation for imaging 3D water dynamics. Implementing an alternative acquisition procedure we boosted the speed of acquisition capturing an entire tomogram within 10 s. This allows, for the first time, tracking of a water front ascending in a rooted soil column upon infiltration of deuterated water time-resolved in 3D. Image quality and resolution could be sustained to a level allowing for capturing the root system in high detail. Good signal-to-noise ratio and contrast were the key to visualize dynamic changes in water content and to localize the root uptake. We demonstrated the ability of ultra-fast tomography to quantitatively image quick changes of water content in the rhizosphere and outlined the value of such imaging data for 3D water uptake modelling. The presented method paves the way for time-resolved studies of various 3D flow and transport phenomena in porous systems.
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Affiliation(s)
- Christian Tötzke
- Institute of Earth and Environmental Science, University of Potsdam, Potsdam, Germany.
| | - Nikolay Kardjilov
- Institute of Applied Materials, Helmholtz Centre for Materials and Energy, Berlin, Germany
| | - Ingo Manke
- Institute of Applied Materials, Helmholtz Centre for Materials and Energy, Berlin, Germany
| | - Sascha E Oswald
- Institute of Earth and Environmental Science, University of Potsdam, Potsdam, Germany
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35
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Ramamoorthy P, Lakshmanan K, Upadhyaya HD, Vadez V, Varshney RK. Root traits confer grain yield advantages under terminal drought in chickpea ( Cicer arietinum L.). FIELD CROPS RESEARCH 2017; 201:146-161. [PMID: 28163361 PMCID: PMC5221670 DOI: 10.1016/j.fcr.2016.11.004] [Citation(s) in RCA: 33] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/23/2016] [Revised: 11/11/2016] [Accepted: 11/13/2016] [Indexed: 05/24/2023]
Abstract
Chickpea, the second most important legume crop, suffers major yield losses by terminal drought stress (DS). Stronger root system is known to enhance drought yields but this understanding remains controversial. To understand precisely the root traits contribution towards yield, 12 chickpea genotypes with well-known drought response were field evaluated under drought and optimal irrigation. Root traits, such as root length density (RLD), total root dry weight (RDW), deep root dry weight (deep RDW) and root:shoot ratio (RSR), were measured periodically by soil coring up to 1.2 m soil depth across drought treatments. Large variations were observed for RLD, RDW, deep RDW and RSR in both the drought treatments. DS increased RLD below 30 cm soil depth, deep RDW, RSR but decreased the root diameter. DS increased the genetic variation in RDW more at the penultimate soil depths. Genetic variation under drought was the widest for RLD ∼50 DAS, for deep RDW ∼50-75 DAS and for RSR at 35 DAS. Genotypes ICC 4958, ICC 8261, Annigeri, ICC 14799, ICC 283 and ICC 867 at vegetative stage and genotypes ICC 14778, ICCV 10, ICC 3325, ICC 14799 and ICC 1882 at the reproductive phase produced greater RLD. Path- and correlation coefficients revealed strong positive contributions of RLD after 45 DAS, deep RDW at vicinity of maturity and RSR at early podfill stages to yield under drought. Breeding for the best combination of profuse RLD at surface soil depths, and RDW at deeper soil layers, was proposed to be the best selection strategy, for an efficient water use and an enhanced terminal drought tolerance in chickpea.
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Affiliation(s)
- Purushothaman Ramamoorthy
- International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Patancheru, India
- Jawaharlal Nehru Technological University Hyderabad (JNTUH), Hyderabad, India
| | | | - Hari D. Upadhyaya
- International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Patancheru, India
- Department of Agronomy, Kansas State University, Manhattan, KS 66506, United States
- UWA Institute of Agriculture, University of Western Australia, Crawley, WA 6009, Australia
| | - Vincent Vadez
- International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Patancheru, India
| | - Rajeev K. Varshney
- International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Patancheru, India
- School of Plant Biology and Institute of Agriculture, The University of Western Australia, WA, Australia
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Zarebanadkouki M, Meunier F, Couvreur V, Cesar J, Javaux M, Carminati A. Estimation of the hydraulic conductivities of lupine roots by inverse modelling of high-resolution measurements of root water uptake. ANNALS OF BOTANY 2016; 118:853-864. [PMID: 27539602 PMCID: PMC5055639 DOI: 10.1093/aob/mcw154] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/10/2016] [Accepted: 06/10/2016] [Indexed: 05/04/2023]
Abstract
Background and Aims Radial and axial hydraulic conductivities are key parameters for proper understanding and modelling of root water uptake. Despite their importance, there is limited experimental information on how the radial and axial hydraulic conductivities vary along roots growing in soil. Here, a new approach was introduced to estimate inversely the profile of hydraulic conductivities along the roots of transpiring plants growing in soil. Methods A three-dimensional model of root water uptake was used to reproduce the measured profile of root water uptake along roots of lupine plant grown in soil. The profile of fluxes was measured using a neutron radiography technique combined with injection of deuterated water as tracer. The aim was to estimate inversely the profiles of the radial and axial hydraulic conductivities along the roots. Key Results The profile of hydraulic conductivities along the taproot and the lateral roots of lupines was calculated using three flexible scenarios. For all scenarios, it was found that the radial hydraulic conductivity increases towards the root tips, while the axial conductivity decreases. Additionally, it was found that in soil with uniform water content: (1) lateral roots were the main location of root water uptake; (2) water uptake by laterals decreased towards the root tips due to the dissipation of water potential along the root; and (3) water uptake by the taproot was higher in the distal segments and was negligible in the proximal parts, which had a low radial conductivity. Conclusions The proposed approach allows the estimation of the root hydraulic properties of plants growing in soil. This information can be used in an advanced model of water uptake to predict the water uptake of different root types or different root architectures under varying soil conditions.
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Affiliation(s)
- Mohsen Zarebanadkouki
- Georg August University of Goettingen, Division of Soil Hydrology, Buesgenweg 2, D-37077 Goettingen, Germany
- *For correspondence. E-mail
| | - Félicien Meunier
- Université catholique de Louvain, Earth and Life Institute-Environnemental Sciences, Louvain-la Neuve, Belgium
| | - Valentin Couvreur
- Université catholique de Louvain, Earth and Life Institute-Agronomy, Louvain-la Neuve, Belgium
| | - Jimenez Cesar
- Georg August University of Goettingen, Division of Soil Hydrology, Buesgenweg 2, D-37077 Goettingen, Germany
| | - Mathieu Javaux
- Université catholique de Louvain, Earth and Life Institute-Environnemental Sciences, Louvain-la Neuve, Belgium
- University of California Davis, Department of Land, Air and Water Resources, Davis, CA, USA
- Forschungszentrum Juelich GmbH, IBG-3: Agrosphere, Juelich, Germany
| | - Andrea Carminati
- Georg August University of Goettingen, Division of Soil Hydrology, Buesgenweg 2, D-37077 Goettingen, Germany
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Topp CN, Bray AL, Ellis NA, Liu Z. How can we harness quantitative genetic variation in crop root systems for agricultural improvement? JOURNAL OF INTEGRATIVE PLANT BIOLOGY 2016; 58:213-25. [PMID: 26911925 DOI: 10.1111/jipb.12470] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/07/2016] [Accepted: 02/21/2016] [Indexed: 05/20/2023]
Abstract
Root systems are a black box obscuring a comprehensive understanding of plant function, from the ecosystem scale down to the individual. In particular, a lack of knowledge about the genetic mechanisms and environmental effects that condition root system growth hinders our ability to develop the next generation of crop plants for improved agricultural productivity and sustainability. We discuss how the methods and metrics we use to quantify root systems can affect our ability to understand them, how we can bridge knowledge gaps and accelerate the derivation of structure-function relationships for roots, and why a detailed mechanistic understanding of root growth and function will be important for future agricultural gains.
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Affiliation(s)
| | - Adam L Bray
- Donald Danforth Plant Science Center, Saint Louis, Missouri 63132, USA
| | - Nathanael A Ellis
- Donald Danforth Plant Science Center, Saint Louis, Missouri 63132, USA
| | - Zhengbin Liu
- Donald Danforth Plant Science Center, Saint Louis, Missouri 63132, USA
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Oburger E, Schmidt H. New Methods To Unravel Rhizosphere Processes. TRENDS IN PLANT SCIENCE 2016; 21:243-255. [PMID: 26776474 DOI: 10.1016/j.tplants.2015.12.005] [Citation(s) in RCA: 62] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/06/2015] [Revised: 12/01/2015] [Accepted: 12/09/2015] [Indexed: 05/19/2023]
Abstract
Root-triggered processes (growth, uptake and release of solutes) vary in space and time, and interact with heterogeneous soil microenvironments that provide habitats for (micro)biota on various scales. Despite tremendous progress in method development in the past decades, finding a suitable experimental set-up to investigate processes occurring at the dynamic conjunction of biosphere, hydrosphere, and pedosphere in the close vicinity of active plant roots still represents a major challenge. We discuss recent methodological developments in rhizosphere research with a focus on imaging techniques. We further review established concepts that have been updated with novel techniques, highlighting the need for combinatorial approaches to disentangle rhizosphere processes on relevant scales.
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Affiliation(s)
- Eva Oburger
- University of Natural Resources and Life Sciences Vienna, Department of Forest and Soil Sciences, Institute of Soil Research, Konrad-Lorenz Strasse 24, 3430 Tulln, Austria.
| | - Hannes Schmidt
- University of Vienna, Research Network 'Chemistry meets Microbiology', Department of Microbiology and Ecosystem Science, Division of Microbial Ecology, Althanstrasse 14, 1090 Vienna, Austria.
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Iijima M, Watanabe T, Yoshida T, Kawasaki M, Kato T, Yamane K. Visualization of water transport into soybean nodules by Tof-SIMS cryo system. JOURNAL OF PLANT PHYSIOLOGY 2015; 178:64-8. [PMID: 25778411 DOI: 10.1016/j.jplph.2015.02.004] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/28/2014] [Revised: 02/17/2015] [Accepted: 02/19/2015] [Indexed: 06/04/2023]
Abstract
This paper examined the route of water supply into soybean nodules through the new visualization technique of time of flight secondary ion mass spectrometry (Tof-SIMS) cryo system, and obtained circumstantial evidence for the water inflow route. The maximum resolution of the Tof-SIMS imaging used by this study was 1.8 μm (defined as the three pixel step length), which allowed us to detect water movement at the cellular level. Deuterium-labeled water was supplied to soybean plants for 4h and the presence of deuterium in soybean nodules was analyzed by the Tof-SIMS cryo system. Deuterium ions were found only in the endodermis tissue surrounding the central cylinder in soybean nodules. Neither xylem vessels nor phloem complex itself did not indicate any deuterium accumulation. Deuterium-ion counts in the endodermis tissue were not changed by girdling treatment, which restricted water movement through the phloem complex. The results strongly indicated that nodule tissues did not receive water directly from the phloem complex, but received water through root cortex apoplastic pathway from the root axis.
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Affiliation(s)
- Morio Iijima
- School of Agriculture, Kinki University, Nara 631-8505, Japan.
| | - Toshimasa Watanabe
- Graduate School of Bioagricultural Sciences, Nagoya University, Nagoya 464-8601, Japan
| | - Tomoharu Yoshida
- Graduate School of Bioagricultural Sciences, Nagoya University, Nagoya 464-8601, Japan
| | - Michio Kawasaki
- Faculty of Agriculture and Life Science, Hirosaki University, Hirosaki 036-8561, Aomori, Japan
| | - Toshiyuki Kato
- Technical Center of Nagoya University, Nagoya 464-8601, Japan
| | - Koji Yamane
- School of Agriculture, Kinki University, Nara 631-8505, Japan
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Nippert JB, Holdo RM. Challenging the maximum rooting depth paradigm in grasslands and savannas. Funct Ecol 2015. [DOI: 10.1111/1365-2435.12390] [Citation(s) in RCA: 49] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Jesse B. Nippert
- Division of Biology Kansas State University 106 Ackert Hall Manhattan KS 66506 USA
| | - Ricardo M. Holdo
- Division of Biological Sciences University of Missouri 217 Tucker HallColumbia MO 65211 USA
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Zarebanadkouki M, Kroener E, Kaestner A, Carminati A. Visualization of root water uptake: quantification of deuterated water transport in roots using neutron radiography and numerical modeling. PLANT PHYSIOLOGY 2014; 166:487-99. [PMID: 25189533 PMCID: PMC4213081 DOI: 10.1104/pp.114.243212] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/20/2014] [Accepted: 09/01/2014] [Indexed: 05/04/2023]
Abstract
Our understanding of soil and plant water relations is limited by the lack of experimental methods to measure water fluxes in soil and plants. Here, we describe a new method to noninvasively quantify water fluxes in roots. To this end, neutron radiography was used to trace the transport of deuterated water (D2O) into roots. The results showed that (1) the radial transport of D2O from soil to the roots depended similarly on diffusive and convective transport and (2) the axial transport of D2O along the root xylem was largely dominated by convection. To quantify the convective fluxes from the radiographs, we introduced a convection-diffusion model to simulate the D2O transport in roots. The model takes into account different pathways of water across the root tissue, the endodermis as a layer with distinct transport properties, and the axial transport of D2O in the xylem. The diffusion coefficients of the root tissues were inversely estimated by simulating the experiments at night under the assumption that the convective fluxes were negligible. Inverse modeling of the experiment at day gave the profile of water fluxes into the roots. For a 24-d-old lupine (Lupinus albus) grown in a soil with uniform water content, root water uptake was higher in the proximal parts of lateral roots and decreased toward the distal parts. The method allows the quantification of the root properties and the regions of root water uptake along the root systems.
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Affiliation(s)
- Mohsen Zarebanadkouki
- Georg August University of Goettingen, Division of Soil Hydrology, 37077 Goettingen, Germany (M.Z., E.K., A.C.); andPaul Scherrer Institute, 5232 Villigen PSI, Switzerland (A.K.)
| | - Eva Kroener
- Georg August University of Goettingen, Division of Soil Hydrology, 37077 Goettingen, Germany (M.Z., E.K., A.C.); andPaul Scherrer Institute, 5232 Villigen PSI, Switzerland (A.K.)
| | - Anders Kaestner
- Georg August University of Goettingen, Division of Soil Hydrology, 37077 Goettingen, Germany (M.Z., E.K., A.C.); andPaul Scherrer Institute, 5232 Villigen PSI, Switzerland (A.K.)
| | - Andrea Carminati
- Georg August University of Goettingen, Division of Soil Hydrology, 37077 Goettingen, Germany (M.Z., E.K., A.C.); andPaul Scherrer Institute, 5232 Villigen PSI, Switzerland (A.K.)
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Suku S, Knipfer T, Fricke W. Do root hydraulic properties change during the early vegetative stage of plant development in barley (Hordeum vulgare)? ANNALS OF BOTANY 2014; 113:385-402. [PMID: 24287810 PMCID: PMC3906963 DOI: 10.1093/aob/mct270] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/10/2013] [Accepted: 10/08/2013] [Indexed: 05/02/2023]
Abstract
BACKGROUND AND AIMS As annual crops develop, transpirational water loss increases substantially. This increase has to be matched by an increase in water uptake through the root system. The aim of this study was to assess the contributions of changes in intrinsic root hydraulic conductivity (Lp, water uptake per unit root surface area, driving force and time), driving force and root surface area to developmental increases in root water uptake. METHODS Hydroponically grown barley plants were analysed during four windows of their vegetative stage of development, when they were 9-13, 14-18, 19-23 and 24-28 d old. Hydraulic conductivity was determined for individual roots (Lp) and for entire root systems (Lp(r)). Osmotic Lp of individual seminal and adventitious roots and osmotic Lp(r) of the root system were determined in exudation experiments. Hydrostatic Lp of individual roots was determined by root pressure probe analyses, and hydrostatic Lp(r) of the root system was derived from analyses of transpiring plants. KEY RESULTS Although osmotic and hydrostatic Lp and Lp(r) values increased initially during development and were correlated positively with plant transpiration rate, their overall developmental increases (about 2-fold) were small compared with increases in transpirational water loss and root surface area (about 10- to 40-fold). The water potential gradient driving water uptake in transpiring plants more than doubled during development, and potentially contributed to the increases in plant water flow. Osmotic Lp(r) of entire root systems and hydrostatic Lp(r) of transpiring plants were similar, suggesting that the main radial transport path in roots was the cell-to-cell path at all developmental stages. CONCLUSIONS Increase in the surface area of root system, and not changes in intrinsic root hydraulic properties, is the main means through which barley plants grown hydroponically sustain an increase in transpirational water loss during their vegetative development.
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Affiliation(s)
- Shimi Suku
- Department of Biotechnology, Malankara Catholic College, Kanyakumari, Tamil Nadu, India
| | - Thorsten Knipfer
- School of Biology and Environmental Science, Science Centre West, University College Dublin, Belfield, Dublin 4, Ireland
| | - Wieland Fricke
- School of Biology and Environmental Science, Science Centre West, University College Dublin, Belfield, Dublin 4, Ireland
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