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For: Cui J, Jiang N, Meng J, Yang G, Liu W, Zhou X, Ma N, Hou X, Luan Y. LncRNA33732-respiratory burst oxidase module associated with WRKY1 in tomato- Phytophthora infestans interactions. Plant J 2019;97:933-946. [PMID: 30472748 DOI: 10.1111/tpj.14173] [Citation(s) in RCA: 102] [Impact Index Per Article: 17.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/28/2017] [Revised: 11/10/2018] [Accepted: 11/15/2018] [Indexed: 05/09/2023]
Number Cited by Other Article(s)
1
Pascual S, Rodríguez-Álvarez CI, López-Vidriero I, Franco-Zorrilla JM, Nombela G. Over Time Changes in the Transcriptomic Profiles of Tomato Plants with or Without Mi-1 Gene During Their Incompatible or Compatible Interactions with the Whitefly Bemisia tabaci. PLANTS (BASEL, SWITZERLAND) 2025;14:1054. [PMID: 40219123 PMCID: PMC11990454 DOI: 10.3390/plants14071054] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/15/2025] [Revised: 02/28/2025] [Accepted: 03/24/2025] [Indexed: 04/14/2025]
2
Jiang Q, Zhou X, Tang J, Yi D, Ma L, Wang X. Genome-Wide Identification and Expression Profile Analysis of the NADPH Oxidase Gene Family in Avena sativa L. Int J Mol Sci 2025;26:2576. [PMID: 40141217 PMCID: PMC11942474 DOI: 10.3390/ijms26062576] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/06/2025] [Revised: 02/13/2025] [Accepted: 02/26/2025] [Indexed: 03/28/2025]  Open
3
Luo Y, Wang K, Cheng J, Nan L. Transcriptome Analysis of Onobrychis viciifolia During Seed Germination Reveals GA3-Inducible Genes Associated with Phenylpropanoid and Hormone Pathways. Int J Mol Sci 2025;26:2335. [PMID: 40076954 PMCID: PMC11900539 DOI: 10.3390/ijms26052335] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2025] [Revised: 03/03/2025] [Accepted: 03/03/2025] [Indexed: 03/14/2025]  Open
4
Yang F, Wu X, Chen L, Qi M. The Tomato lncRNA47258-miR319b-TCP Module in Biocontrol Bacteria Sneb821 Induced Plants Resistance to Meloidogyne incognita. Pathogens 2025;14:256. [PMID: 40137741 PMCID: PMC11945786 DOI: 10.3390/pathogens14030256] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/06/2025] [Revised: 01/20/2025] [Accepted: 01/21/2025] [Indexed: 03/29/2025]  Open
5
Chen Y, Zhou Y, Chen J, Cai H, Yang R, Zhang D, Huang Y. Mechanisms of Chinese Hickory Resistance to Dry Rot Disease by Botryosphaeria dothidea: A Comprehensive Analysis from Gene Expression to Non-Coding RNAs. PLANTS (BASEL, SWITZERLAND) 2025;14:793. [PMID: 40094748 PMCID: PMC11901809 DOI: 10.3390/plants14050793] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/30/2024] [Revised: 02/14/2025] [Accepted: 02/26/2025] [Indexed: 03/19/2025]
6
Yang R, Su C, Xue Z, Wei H, Wang Z, Zhu J, Meng J, Luan Y. Combination of PAMP-induced peptide signaling and its regulator SpWRKY65 boosts tomato resistance to Phytophthora infestans. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2025;121:e70098. [PMID: 40089908 DOI: 10.1111/tpj.70098] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/02/2024] [Revised: 02/02/2025] [Accepted: 03/03/2025] [Indexed: 03/17/2025]
7
Zhao J, Ding Y, Ramakrishnan M, Zou LH, Chen Y, Zhou M. LTR retrotransposon-derived novel lncRNA2 enhances cold tolerance in Moso bamboo by modulating antioxidant activity and photosynthetic efficiency. PeerJ 2025;13:e19056. [PMID: 40028216 PMCID: PMC11871892 DOI: 10.7717/peerj.19056] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/30/2024] [Accepted: 02/05/2025] [Indexed: 03/05/2025]  Open
8
Wang Z, Lv R, Hong Y, Su C, Wang Z, Zhu J, Yang R, Wang R, Li Y, Meng J, Luan Y. Transcription factor KUA1 positively regulates tomato resistance against Phytophthora infestans by fine-tuning reactive oxygen species accumulation. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2025;121:e70007. [PMID: 39993147 DOI: 10.1111/tpj.70007] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/01/2024] [Revised: 10/20/2024] [Accepted: 01/10/2025] [Indexed: 02/26/2025]
9
Luo Y, Nan L. Genome-wide identification of high-affinity nitrate transporter 2 (NRT2) gene family under phytohormones and abiotic stresses in alfalfa (Medicago sativa). Sci Rep 2024;14:31920. [PMID: 39738449 PMCID: PMC11685795 DOI: 10.1038/s41598-024-83438-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/13/2024] [Accepted: 12/16/2024] [Indexed: 01/02/2025]  Open
10
Liao L, Zhao Z, Zhang R, Luo C, Hu Y, Yu Z, Cui J. Correlation Between Effector Gene Expression Targeted by lncRNAs in the Oomycete Fish Pathogen, Saprolegnia parasitica. MARINE BIOTECHNOLOGY (NEW YORK, N.Y.) 2024;27:3. [PMID: 39576381 DOI: 10.1007/s10126-024-10385-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/23/2024] [Accepted: 10/09/2024] [Indexed: 11/24/2024]
11
Chen D, Liu Y, Chen Y, Li B, Chen T, Tian S. Functions of membrane proteins in regulating fruit ripening and stress responses of horticultural crops. MOLECULAR HORTICULTURE 2024;4:35. [PMID: 39313804 PMCID: PMC11421178 DOI: 10.1186/s43897-024-00111-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/20/2024] [Accepted: 07/16/2024] [Indexed: 09/25/2024]
12
Li YH, Liu C, Xu RZ, Fan YP, Wang JY, Li H, Zhang J, Zhang HJ, Wang JJ, Li DK. Genome-wide analysis of long non-coding RNAs involved in the fruit development process of Cucumis melo Baogua. PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS : AN INTERNATIONAL JOURNAL OF FUNCTIONAL PLANT BIOLOGY 2024;30:1475-1491. [PMID: 39310708 PMCID: PMC11413265 DOI: 10.1007/s12298-024-01507-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/16/2024] [Revised: 08/20/2024] [Accepted: 08/27/2024] [Indexed: 09/25/2024]
13
Traubenik S, Charon C, Blein T. From environmental responses to adaptation: the roles of plant lncRNAs. PLANT PHYSIOLOGY 2024;195:232-244. [PMID: 38246143 DOI: 10.1093/plphys/kiae034] [Citation(s) in RCA: 9] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/18/2023] [Revised: 12/18/2023] [Accepted: 01/02/2024] [Indexed: 01/23/2024]
14
Jiao N, Xu J, Wang Y, Li D, Chen F, Chen Y, Chen J. Genome-wide characterization of post-transcriptional processes related to wood formation in Dalbergia odorifera. BMC Genomics 2024;25:372. [PMID: 38627613 PMCID: PMC11022335 DOI: 10.1186/s12864-024-10300-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/13/2023] [Accepted: 04/10/2024] [Indexed: 04/19/2024]  Open
15
Zhao X, Li F, Ali M, Li X, Fu X, Zhang X. Emerging roles and mechanisms of lncRNAs in fruit and vegetables. HORTICULTURE RESEARCH 2024;11:uhae046. [PMID: 38706580 PMCID: PMC11069430 DOI: 10.1093/hr/uhae046] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/13/2023] [Accepted: 02/07/2024] [Indexed: 05/07/2024]
16
Shang K, Wang R, Cao W, Wang X, Wang Y, Shi Z, Liu H, Zhou S, Zhu X, Zhu C. Abscisic-acid-responsive StlncRNA13558 induces StPRL expression to increase potato resistance to Phytophthora infestans infection. FRONTIERS IN PLANT SCIENCE 2024;15:1338062. [PMID: 38504894 PMCID: PMC10948444 DOI: 10.3389/fpls.2024.1338062] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/14/2023] [Accepted: 02/21/2024] [Indexed: 03/21/2024]
17
Cao W, Yang L, Zhuang M, Lv H, Wang Y, Zhang Y, Ji J. Plant non-coding RNAs: The new frontier for the regulation of plant development and adaptation to stress. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2024;208:108435. [PMID: 38402798 DOI: 10.1016/j.plaphy.2024.108435] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/31/2023] [Revised: 02/07/2024] [Accepted: 02/11/2024] [Indexed: 02/27/2024]
18
Zhang JH, Wei HB, Hong YH, Yang RR, Meng J, Luan YS. The lncRNA20718-miR6022-RLPs module regulates tomato resistance to Phytophthora infestans. PLANT CELL REPORTS 2024;43:57. [PMID: 38319523 DOI: 10.1007/s00299-024-03161-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/25/2023] [Accepted: 01/16/2024] [Indexed: 02/07/2024]
19
Chen D, Zhang Z, Chen Y, Li B, Chen T, Tian S. Transcriptional landscape of pathogen-responsive lncRNAs in tomato unveils the role of hydrolase encoding genes in response to Botrytis cinerea invasion. PLANT, CELL & ENVIRONMENT 2024;47:651-663. [PMID: 37899711 DOI: 10.1111/pce.14757] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/18/2023] [Revised: 09/30/2023] [Accepted: 10/19/2023] [Indexed: 10/31/2023]
20
Othman SMIS, Mustaffa AF, Mohd Zahid NII, Che-Othman MH, Samad AFA, Goh HH, Ismail I. Harnessing the potential of non-coding RNA: An insight into its mechanism and interaction in plant biotic stress. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2024;207:108387. [PMID: 38266565 DOI: 10.1016/j.plaphy.2024.108387] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/26/2023] [Revised: 01/02/2024] [Accepted: 01/17/2024] [Indexed: 01/26/2024]
21
Wang T, Long C, Chang M, Wu Y, Su S, Wei J, Jiang S, Wang X, He J, Xing D, He Y, Ran Y, Li W. Genome-wide identification of the B3 transcription factor family in pepper (Capsicum annuum) and expression patterns during fruit ripening. Sci Rep 2024;14:2226. [PMID: 38278802 PMCID: PMC10817905 DOI: 10.1038/s41598-023-51080-6] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/20/2023] [Accepted: 12/30/2023] [Indexed: 01/28/2024]  Open
22
Jia Y, Zhao H, Niu Y, Wang Y. Long noncoding RNA from Betula platyphylla, BplncSIR1, confers salt tolerance by regulating BpNAC2 to mediate reactive oxygen species scavenging and stomatal movement. PLANT BIOTECHNOLOGY JOURNAL 2024;22:48-65. [PMID: 37697445 PMCID: PMC10754008 DOI: 10.1111/pbi.14164] [Citation(s) in RCA: 6] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/09/2023] [Revised: 07/11/2023] [Accepted: 08/04/2023] [Indexed: 09/13/2023]
23
Yuan C, He RR, Zhao WL, Chen YQ, Zhang YC. Insights into the roles of long noncoding RNAs in the communication between plants and the environment. THE PLANT GENOME 2023;16:e20277. [PMID: 36345558 DOI: 10.1002/tpg2.20277] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/21/2022] [Accepted: 09/19/2022] [Indexed: 06/16/2023]
24
Bhar A, Roy A. Emphasizing the Role of Long Non-Coding RNAs (lncRNA), Circular RNA (circRNA), and Micropeptides (miPs) in Plant Biotic Stress Tolerance. PLANTS (BASEL, SWITZERLAND) 2023;12:3951. [PMID: 38068588 PMCID: PMC10708525 DOI: 10.3390/plants12233951] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/11/2023] [Revised: 11/10/2023] [Accepted: 11/13/2023] [Indexed: 02/13/2025]
25
Javed T, Gao SJ. WRKY transcription factors in plant defense. Trends Genet 2023;39:787-801. [PMID: 37633768 DOI: 10.1016/j.tig.2023.07.001] [Citation(s) in RCA: 89] [Impact Index Per Article: 44.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/18/2023] [Revised: 07/04/2023] [Accepted: 07/05/2023] [Indexed: 08/28/2023]
26
Su C, Wang Z, Cui J, Wang Z, Wang R, Meng J, Luan Y. Sl-lncRNA47980, a positive regulator affects tomato resistance to Phytophthora infestans. Int J Biol Macromol 2023;248:125824. [PMID: 37453642 DOI: 10.1016/j.ijbiomac.2023.125824] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2023] [Revised: 07/09/2023] [Accepted: 07/12/2023] [Indexed: 07/18/2023]
27
Zhang YC, Yuan C, Chen YQ. Noncoding RNAs and their roles in regulating the agronomic traits of crops. FUNDAMENTAL RESEARCH 2023;3:718-726. [PMID: 38933294 PMCID: PMC11197796 DOI: 10.1016/j.fmre.2023.02.020] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/07/2022] [Revised: 02/09/2023] [Accepted: 02/28/2023] [Indexed: 03/18/2023]  Open
28
Wang Z, Su C, Hu W, Su Q, Luan Y. The effectors of Phytophthora infestans impact host immunity upon regulation of antagonistic hormonal activities. PLANTA 2023;258:59. [PMID: 37530861 DOI: 10.1007/s00425-023-04215-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/06/2023] [Accepted: 07/20/2023] [Indexed: 08/03/2023]
29
Sharma S, Sett S, Das T, Prasad A, Prasad M. Recent perspective of non-coding RNAs at the nexus of plant-pathogen interaction. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2023;201:107852. [PMID: 37356385 DOI: 10.1016/j.plaphy.2023.107852] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/22/2023] [Revised: 06/06/2023] [Accepted: 06/18/2023] [Indexed: 06/27/2023]
30
Miao W, Xiao X, Wang Y, Ge L, Yang Y, Liu Y, Liao Y, Guan Z, Chen S, Fang W, Chen F, Zhao S. CmWRKY6-1-CmWRKY15-like transcriptional cascade negatively regulates the resistance to fusarium oxysporum infection in Chrysanthemum morifolium. HORTICULTURE RESEARCH 2023;10:uhad101. [PMID: 37577400 PMCID: PMC10419886 DOI: 10.1093/hr/uhad101] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/25/2023] [Accepted: 05/09/2023] [Indexed: 08/15/2023]
31
Li C, Lai X, Yu X, Xiong Z, Chen J, Lang X, Feng H, Wan X, Liu K. Plant long noncoding RNAs: Recent progress in understanding their roles in growth, development, and stress responses. Biochem Biophys Res Commun 2023;671:270-277. [PMID: 37311264 DOI: 10.1016/j.bbrc.2023.05.103] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2023] [Accepted: 05/25/2023] [Indexed: 06/15/2023]
32
Jiang L, Liu K, Zhang T, Chen J, Zhao S, Cui Y, Zhou W, Yu Y, Chen S, Wang C, Zhang C. The RhWRKY33a-RhPLATZ9 regulatory module delays petal senescence by suppressing rapid reactive oxygen species accumulation in rose flowers. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2023;114:1425-1442. [PMID: 36951178 DOI: 10.1111/tpj.16202] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/09/2022] [Revised: 02/12/2023] [Accepted: 03/10/2023] [Indexed: 06/17/2023]
33
Zhou R, Dong Y, Wang C, Liu J, Liang Q, Meng X, Lang X, Xu S, Liu W, Zhang S, Wang N, Yang KQ, Fang H. LncRNA109897-JrCCR4-JrTLP1b forms a positive feedback loop to regulate walnut resistance against anthracnose caused by Colletotrichum gloeosporioides. HORTICULTURE RESEARCH 2023;10:uhad086. [PMID: 37786525 PMCID: PMC10541558 DOI: 10.1093/hr/uhad086] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/11/2023] [Accepted: 04/20/2023] [Indexed: 10/04/2023]
34
Saxena S, Das A, Kaila T, Ramakrishna G, Sharma S, Gaikwad K. Genomic survey of high-throughput RNA-Seq data implicates involvement of long intergenic non-coding RNAs (lincRNAs) in cytoplasmic male-sterility and fertility restoration in pigeon pea. Genes Genomics 2023;45:783-811. [PMID: 37115379 DOI: 10.1007/s13258-023-01383-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2022] [Accepted: 10/21/2022] [Indexed: 04/29/2023]
35
Wang Z, Cui Q, Su C, Zhao S, Wang R, Wang Z, Meng J, Luan Y. Unveiling the secrets of non-coding RNA-encoded peptides in plants: A comprehensive review of mining methods and research progress. Int J Biol Macromol 2023:124952. [PMID: 37257526 DOI: 10.1016/j.ijbiomac.2023.124952] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/22/2023] [Revised: 05/15/2023] [Accepted: 05/16/2023] [Indexed: 06/02/2023]
36
Kahlon PS, Förner A, Muser M, Oubounyt M, Gigl M, Hammerl R, Baumbach J, Hückelhoven R, Dawid C, Stam R. Laminarin-triggered defence responses are geographically dependent in natural populations of Solanum chilense. JOURNAL OF EXPERIMENTAL BOTANY 2023;74:3240-3254. [PMID: 36880316 DOI: 10.1093/jxb/erad087] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/27/2022] [Accepted: 03/06/2023] [Indexed: 05/21/2023]
37
Li L, Guo N, Liu T, Yang S, Hu X, Shi S, Li S. Genome-wide identification and characterization of long non-coding RNA in barley roots in response to Piriformospora indica colonization. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2023;330:111666. [PMID: 36858207 DOI: 10.1016/j.plantsci.2023.111666] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/05/2022] [Revised: 02/22/2023] [Accepted: 02/23/2023] [Indexed: 06/18/2023]
38
Huang J, Zhou W, Zhang X, Li Y. Roles of long non-coding RNAs in plant immunity. PLoS Pathog 2023;19:e1011340. [PMID: 37167200 PMCID: PMC10174565 DOI: 10.1371/journal.ppat.1011340] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/13/2023]  Open
39
Thakur R, Devi R, Lal MK, Tiwari RK, Sharma S, Kumar R. Morphological, ultrastructural and molecular variations in susceptible and resistant genotypes of chickpea infected with Botrytis grey mould. PeerJ 2023;11:e15134. [PMID: 37009149 PMCID: PMC10064989 DOI: 10.7717/peerj.15134] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/19/2022] [Accepted: 03/06/2023] [Indexed: 03/30/2023]  Open
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Wu M, Luo Z, Cao S. Promoter Variation of the Key Apple Fruit Texture Related Gene MdPG1 and the Upstream Regulation Analysis. PLANTS (BASEL, SWITZERLAND) 2023;12:1452. [PMID: 37050079 PMCID: PMC10096972 DOI: 10.3390/plants12071452] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/08/2023] [Revised: 03/23/2023] [Accepted: 03/24/2023] [Indexed: 06/19/2023]
41
Wang Y, Wang X, Fang J, Yin W, Yan X, Tu M, Liu H, Zhang Z, Li Z, Gao M, Lu H, Wang Y, Wang X. VqWRKY56 interacts with VqbZIPC22 in grapevine to promote proanthocyanidin biosynthesis and increase resistance to powdery mildew. THE NEW PHYTOLOGIST 2023;237:1856-1875. [PMID: 36527243 DOI: 10.1111/nph.18688] [Citation(s) in RCA: 35] [Impact Index Per Article: 17.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/03/2022] [Accepted: 11/15/2022] [Indexed: 06/17/2023]
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Chen Z, Meng J, Zhao S, Yin C, Luan Y. sORFPred: A Method Based on Comprehensive Features and Ensemble Learning to Predict the sORFs in Plant LncRNAs. Interdiscip Sci 2023;15:189-201. [PMID: 36705893 DOI: 10.1007/s12539-023-00552-4] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2022] [Revised: 01/11/2023] [Accepted: 01/13/2023] [Indexed: 01/28/2023]
43
Ren C, Wang H, Zhou Z, Jia J, Zhang Q, Liang C, Li W, Zhang Y, Yu G. Genome-wide identification of the B3 gene family in soybean and the response to melatonin under cold stress. FRONTIERS IN PLANT SCIENCE 2023;13:1091907. [PMID: 36714689 PMCID: PMC9880549 DOI: 10.3389/fpls.2022.1091907] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/07/2022] [Accepted: 12/20/2022] [Indexed: 06/18/2023]
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Li Q, Shen H, Yuan S, Dai X, Yang C. miRNAs and lncRNAs in tomato: Roles in biotic and abiotic stress responses. FRONTIERS IN PLANT SCIENCE 2023;13:1094459. [PMID: 36714724 PMCID: PMC9875070 DOI: 10.3389/fpls.2022.1094459] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/10/2022] [Accepted: 12/19/2022] [Indexed: 06/18/2023]
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Yu L, Ding Y, Zhou M. A long non-coding RNA PelncRNA1 is involved in Phyllostachys edulis response to UV-B stress. PeerJ 2023;11:e15243. [PMID: 37187514 PMCID: PMC10178214 DOI: 10.7717/peerj.15243] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2022] [Accepted: 03/28/2023] [Indexed: 05/17/2023]  Open
46
Yang W, Bai Q, Li Y, Chen J, Liu C. Epigenetic modifications: Allusive clues of lncRNA functions in plants. Comput Struct Biotechnol J 2023;21:1989-1994. [PMID: 36950220 PMCID: PMC10025020 DOI: 10.1016/j.csbj.2023.03.008] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2022] [Revised: 02/25/2023] [Accepted: 03/08/2023] [Indexed: 03/13/2023]  Open
47
Wei J, Chen Q, Lin J, Chen F, Chen R, Liu H, Chu P, Lu Z, Li S, Yu G. Genome-wide identification and expression analysis of tomato glycoside hydrolase family 1 β-glucosidase genes in response to abiotic stresses. BIOTECHNOL BIOTEC EQ 2022. [DOI: 10.1080/13102818.2022.2072767] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]  Open
48
Ding LN, Li YT, Wu YZ, Li T, Geng R, Cao J, Zhang W, Tan XL. Plant Disease Resistance-Related Signaling Pathways: Recent Progress and Future Prospects. Int J Mol Sci 2022;23:ijms232416200. [PMID: 36555841 PMCID: PMC9785534 DOI: 10.3390/ijms232416200] [Citation(s) in RCA: 83] [Impact Index Per Article: 27.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2022] [Revised: 12/02/2022] [Accepted: 12/12/2022] [Indexed: 12/23/2022]  Open
49
Wang Y, Deng XW, Zhu D. From molecular basics to agronomic benefits: Insights into noncoding RNA-mediated gene regulation in plants. JOURNAL OF INTEGRATIVE PLANT BIOLOGY 2022;64:2290-2308. [PMID: 36453685 DOI: 10.1111/jipb.13420] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/12/2022] [Accepted: 11/30/2022] [Indexed: 06/17/2023]
50
Characterization of lncRNAs in mycorrhizal tomato and elucidation of the role of lncRNA69908 in disease resistance. Biochem Biophys Res Commun 2022;634:203-210. [DOI: 10.1016/j.bbrc.2022.09.117] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2022] [Accepted: 09/30/2022] [Indexed: 11/23/2022]
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