1
|
Abbey CK, Zuley ML, Victor JD. Local texture statistics augment the power spectrum in modeling radiographic judgments of breast density. J Med Imaging (Bellingham) 2023; 10:065502. [PMID: 38074625 PMCID: PMC10704190 DOI: 10.1117/1.jmi.10.6.065502] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2023] [Revised: 10/05/2023] [Accepted: 10/16/2023] [Indexed: 02/12/2024] Open
Abstract
Purpose Anatomical "noise" is an important limitation of full-field digital mammography. Understanding its impact on clinical judgments is made difficult by the complexity of breast parenchyma, which results in image texture not fully captured by the power spectrum. While the number of possible parameters for characterizing anatomical noise is quite large, a specific set of local texture statistics has been shown to be visually salient, and human sensitivity to these statistics corresponds to their informativeness in natural scenes. Approach We evaluate these local texture statistics in addition to standard power-spectral measures to determine whether they have additional explanatory value for radiologists' breast density judgments. We analyzed an image database consisting of 111 disease-free mammographic screening exams (4 views each) acquired at the University of Pittsburgh Medical Center. Each exam had a breast density score assigned by the examining radiologist. Power-spectral descriptors and local image statistics were extracted from images of breast parenchyma. Model-selection criteria and accuracy were used to assess the explanatory and predictive value of local image statistics for breast density judgments. Results The model selection criteria show that adding local texture statistics to descriptors of the power spectra produce better explanatory and predictive models of radiologists' judgments of breast density. Thus, local texture statistics capture, in some form, non-Gaussian aspects of texture that radiologists are using. Conclusions Since these local texture statistics are expected to be impacted by imaging factors like modality, dose, and image processing, they suggest avenues for understanding and optimizing observer performance.
Collapse
Affiliation(s)
- Craig K. Abbey
- University of California, Santa Barbara, Department of Psychological and Brain Sciences, Santa Barbara, California, United States
| | - Margarita L. Zuley
- University of Pittsburgh Medical Center, Department of Radiology, Pittsburgh, Pennsylvania, United States
| | - Jonathan D. Victor
- Feil Family Brain and Mind Research Institute, Weill Cornell Medicine, New York, United States
| |
Collapse
|
2
|
Wickramasinghe SU, Weerakoon TI, Gamage DPJ, Bandara DMS, Pallewatte DA. Identification of Radiomic Features as an Imaging Marker to Differentiate Benign and Malignant Breast Masses Based on Magnetic Resonance Imaging. IMAGING 2022. [DOI: 10.1556/1647.2022.00065] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022] Open
Abstract
AbstractBackground - Breast cancer is one of the most common cancers among women globally and early identification is known to increase patient outcomes. Therefore, the main aim of this study is to identify the essential radiomic features as an image marker and compare the diagnostic feasibility of feature parameters derived from radiomics analysis and conventional Magnetic Resonance Imaging (MRI) to differentiate benign and malignant breast masses.Methods and Material - T1-weighted Dynamic Contrast-Enhanced (DCE) breast MR axial images of 151 (benign (79) and malignant (72)) patients were chosen. Regions of interest were selected using both manual and semi-automatic segmentation from each lesion. 382 radiomic features computed on the selected regions. A random forest model was employed to detect the most important features that differentiate benign and malignant breast masses. The ten most important radiomics features were obtained from manual and semi-automatic segmentation based on the Gini index to train a support vector machine. MATLAB and IBM SPSS Statistics Subscription software used for statistical analysis.Results - The accuracy (sensitivity) of the models built from the ten most significant features obtained from manual and semi-automatic segmentation were 0.815 (0.84), 0.821 (0.87), respectively. The top 10 features obtained from manual delineation and semi-automatic segmentation showed a significant difference (p<0.05) between benign and malignant breast lesions.Conclusion - This radiomics analysis based on DCE-BMRI revealed distinct radiomic features to differentiate benign and malignant breast masses. Therefore, the radiomics analysis can be used as a supporting tool in detecting breast MRI lesions.
Collapse
Affiliation(s)
- Sachini Udara Wickramasinghe
- BSc (Hons) Radiography, Department of Radiography and Radiotherapy, Faculty of Allied Health Sciences, General Sir John Kotelawala Defence University, Rathmalana, Sri Lanka
| | - Thushara Indika Weerakoon
- BSc (Hons) Radiography, Department of Radiography and Radiotherapy, Faculty of Allied Health Sciences, General Sir John Kotelawala Defence University, Rathmalana, Sri Lanka
| | | | | | | |
Collapse
|
3
|
Zhou K, Li W, Zhao D. Deep learning-based breast region extraction of mammographic images combining pre-processing methods and semantic segmentation supported by Deeplab v3. Technol Health Care 2022; 30:173-190. [PMID: 35124595 PMCID: PMC9028646 DOI: 10.3233/thc-228017] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
Abstract
BACKGROUND Breast cancer has long been one of the major global life-threatening illnesses among women. Surgery and adjuvant therapy, coupled with early detection, could save many lives. This underscores the importance of mammography, a cost-effective and accurate method for early detection. Due to the poor contrast, noise and artifacts which results in difficulty for radiologists to diagnose, Computer-Aided Diagnosis (CAD) systems are hence developed. The extraction of breast region is a fundamental and crucial preparation step for further development of CAD systems. OBJECTIVE The proposed method aims to extract breast region accurately from mammographic images where noise is suppressed, contrast is enhanced and pectoral muscle region is removed. METHODS This paper presents a new deep learning-based breast region extraction method that combines pre-processing methods containing noise suppression using median filter, contrast enhancement using CLAHE and semantic segmentation using Deeplab v3+ model. RESULTS The method is trained and evaluated on mini-MIAS dataset. It has also been evaluated on INbreast dataset. The results outperform those generated by other recent researches and are indicative of the capacity of the model to retain its accuracy and runtime advantage across different databases with different image resolutions. CONCLUSIONS The proposed method shows state-of-the-art performance at extracting breast region from mammographic images. Wide range of evaluation on two commonly used mammography datasets proves the ability and adaptability of the method.
Collapse
Affiliation(s)
- Kuochen Zhou
- School of Computer Science and Engineering, Northeastern University, Shenyang, Liaoning, China
| | - Wei Li
- School of Computer Science and Engineering, Northeastern University, Shenyang, Liaoning, China
| | - Dazhe Zhao
- School of Computer Science and Engineering, Northeastern University, Shenyang, Liaoning, China
| |
Collapse
|
4
|
Castrillón CO, Puerta JA. STATISTICAL MODELING OF GLANDULARITY FROM MAMMOGRAPHY IMAGES. RADIATION PROTECTION DOSIMETRY 2021; 197:237-244. [PMID: 34994783 DOI: 10.1093/rpd/ncab179] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/01/2020] [Revised: 10/27/2021] [Accepted: 12/20/2021] [Indexed: 06/14/2023]
Abstract
This study presents a methodology for estimation of breast glandularity, which is an important factor to assess radiological risk in mammography patients. The investigation took place in an institution located at department of Antioquia-Colombia, where 200 patients participated. The models were obtained using partial least squares regression, where Dance's model was used as reference; parameters of mammography images, equipment and patient were used as predicting variables (kV, mAs, patient's weight, breast area and mean gray value of breast images). Coefficients of correlation equal to 89 and 88 were obtained for training and validation respectively in mediolateral oblique (MLO) and 84 and 89 for craniocaudal (CC). These models were used to estimate the mean glandular dose for all patients and later to obtain the institutional reference levels, 0.87 and 0.96 mGy for CC and MLO, respectively, following the recommendations of the ICRP publication No. 135. This study suggests that glandularity could be estimated with few parameters from equipment and patient.
Collapse
|
5
|
Hernández A, Miranda DA, Pertuz S. Algorithms and methods for computerized analysis of mammography images in breast cancer risk assessment. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 2021; 212:106443. [PMID: 34656014 DOI: 10.1016/j.cmpb.2021.106443] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/13/2021] [Accepted: 09/22/2021] [Indexed: 06/13/2023]
Abstract
BACKGROUND AND OBJECTIVES The computerized analysis of mammograms for the development of quantitative biomarkers is a growing field with applications in breast cancer risk assessment. Computerized image analysis offers the possibility of using different methods and algorithms to extract additional information from screening and diagnosis images to aid in the assessment of breast cancer risk. In this work, we review the algorithms and methods for the automated, computerized analysis of mammography images for the task mentioned, and discuss the main challenges that the development and improvement of these methods face today. METHODS We review the recent progress in two main branches of mammography-based risk assessment: parenchymal analysis and breast density estimation, including performance indicators of most of the studies considered. Parenchymal analysis methods are divided into feature-based methods and deep learning-based methods; breast density methods are grouped into area-based, volume-based, and breast categorization methods. Additionally, we identify the challenges that these study fields currently face. RESULTS Parenchymal analysis using deep learning algorithms are on the rise, with some studies showing high-performance indicators, such as an area under the receiver operating characteristic curve of up to 90. Methods for risk assessment using breast density report a wider variety of performance indicators; however, we can also identify that the approaches using deep learning methods yield high performance in each of the subdivisions considered. CONCLUSIONS Both breast density estimation and parenchymal analysis are promising tools for the task of breast cancer risk assessment; deep learning methods have shown performance comparable or superior to the other considered methods. All methods considered face challenges such as the lack of objective comparison between them and the lack of access to datasets from different populations.
Collapse
Affiliation(s)
| | | | - Said Pertuz
- Universidad Industrial de Santander, Bucaramanga, Colombia.
| |
Collapse
|
6
|
Maghsoudi OH, Gastounioti A, Scott C, Pantalone L, Wu FF, Cohen EA, Winham S, Conant EF, Vachon C, Kontos D. Deep-LIBRA: An artificial-intelligence method for robust quantification of breast density with independent validation in breast cancer risk assessment. Med Image Anal 2021; 73:102138. [PMID: 34274690 PMCID: PMC8453099 DOI: 10.1016/j.media.2021.102138] [Citation(s) in RCA: 25] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2020] [Revised: 04/29/2021] [Accepted: 06/16/2021] [Indexed: 02/06/2023]
Abstract
Breast density is an important risk factor for breast cancer that also affects the specificity and sensitivity of screening mammography. Current federal legislation mandates reporting of breast density for all women undergoing breast cancer screening. Clinically, breast density is assessed visually using the American College of Radiology Breast Imaging Reporting And Data System (BI-RADS) scale. Here, we introduce an artificial intelligence (AI) method to estimate breast density from digital mammograms. Our method leverages deep learning using two convolutional neural network architectures to accurately segment the breast area. An AI algorithm combining superpixel generation and radiomic machine learning is then applied to differentiate dense from non-dense tissue regions within the breast, from which breast density is estimated. Our method was trained and validated on a multi-racial, multi-institutional dataset of 15,661 images (4,437 women), and then tested on an independent matched case-control dataset of 6368 digital mammograms (414 cases; 1178 controls) for both breast density estimation and case-control discrimination. On the independent dataset, breast percent density (PD) estimates from Deep-LIBRA and an expert reader were strongly correlated (Spearman correlation coefficient = 0.90). Moreover, in a model adjusted for age and BMI, Deep-LIBRA yielded a higher case-control discrimination performance (area under the ROC curve, AUC = 0.612 [95% confidence interval (CI): 0.584, 0.640]) compared to four other widely-used research and commercial breast density assessment methods (AUCs = 0.528 to 0.599). Our results suggest a strong agreement of breast density estimates between Deep-LIBRA and gold-standard assessment by an expert reader, as well as improved performance in breast cancer risk assessment over state-of-the-art open-source and commercial methods.
Collapse
Affiliation(s)
- Omid Haji Maghsoudi
- Department of Radiology, University of Pennsylvania, Philadelphia, 19104, PA, USA,
| | - Aimilia Gastounioti
- Department of Radiology, University of Pennsylvania, Philadelphia, 19104, PA, USA
| | - Christopher Scott
- Department of Health Sciences Research, Mayo Clinic, Rochester, 55905, MN, USA
| | - Lauren Pantalone
- Department of Radiology, University of Pennsylvania, Philadelphia, 19104, PA, USA
| | - Fang-Fang Wu
- Department of Health Sciences Research, Mayo Clinic, Rochester, 55905, MN, USA
| | - Eric A. Cohen
- Department of Radiology, University of Pennsylvania, Philadelphia, 19104, PA, USA
| | - Stacey Winham
- Department of Health Sciences Research, Mayo Clinic, Rochester, 55905, MN, USA
| | - Emily F. Conant
- Department of Radiology, University of Pennsylvania, Philadelphia, 19104, PA, USA
| | - Celine Vachon
- Department of Health Sciences Research, Mayo Clinic, Rochester, 55905, MN, USA
| | - Despina Kontos
- Department of Radiology, University of Pennsylvania, Philadelphia, 19104, PA, USA,
| |
Collapse
|
7
|
Li C, Xu J, Liu Q, Zhou Y, Mou L, Pu Z, Xia Y, Zheng H, Wang S. Multi-View Mammographic Density Classification by Dilated and Attention-Guided Residual Learning. IEEE/ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS 2021; 18:1003-1013. [PMID: 32012021 DOI: 10.1109/tcbb.2020.2970713] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
Breast density is widely adopted to reflect the likelihood of early breast cancer development. Existing methods of mammographic density classification either require steps of manual operations or achieve only moderate classification accuracy due to the limited model capacity. In this study, we present a radiomics approach based on dilated and attention-guided residual learning for the task of mammographic density classification. The proposed method was instantiated with two datasets, one clinical dataset and one publicly available dataset, and classification accuracies of 88.7 and 70.0 percent were obtained, respectively. Although the classification accuracy of the public dataset was lower than the clinical dataset, which was very likely related to the dataset size, our proposed model still achieved a better performance than the naive residual networks and several recently published deep learning-based approaches. Furthermore, we designed a multi-stream network architecture specifically targeting at analyzing the multi-view mammograms. Utilizing the clinical dataset, we validated that multi-view inputs were beneficial to the breast density classification task with an increase of at least 2.0 percent in accuracy and the different views lead to different model classification capacities. Our method has a great potential to be further developed and applied in computer-aided diagnosis systems. Our code is available at https://github.com/lich0031/Mammographic_Density_Classification.
Collapse
|
8
|
Janan F, Brady M. RICE: A method for quantitative mammographic image enhancement. Med Image Anal 2021; 71:102043. [PMID: 33813287 DOI: 10.1016/j.media.2021.102043] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/03/2020] [Revised: 03/09/2021] [Accepted: 03/15/2021] [Indexed: 10/21/2022]
Abstract
We introduce Region of Interest Contrast Enhancement (RICE) to identify focal densities in mammograms. It aims to help radiologists: 1) enhancing the contrast of mammographic images; and 2) detecting regions of interest (such as focal densities) that are candidate masses potentially masked behind dense parenchyma. Cancer masking is an unsolved issue, particularly in breast density categories BI-RADS C and D. RICE suppresses normal breast parenchyma in order to highlight focal densities. Unlike methods that enhance mammograms by modifying the dynamic range of an image; RICE relies on the actual tissue composition of the breast. It segments Volumetric Breast Density (VBD) maps into smaller regions and then applies a recursive mechanism to estimate the 'neighbourhood' for each segment. The method then subtracts and updates the neighbourhood, or the encompassing tissue, from each piecewise constant component of the breast image. This not only enhances the appearance of a candidate mass but also helps in estimating the mass density. In extensive experiments, RICE enhances focal densities in all breast density types including the most challenging category BI-RADS D. Suitably adapted, RICE can be used as a precursor to any computer-aided diagnostics and detection system.
Collapse
Affiliation(s)
- Faraz Janan
- School of Computer Science, University of Lincoln, Issac Newton Building, Bradyford Pool LN6 7TS, United Kingdom.
| | - Michael Brady
- Department of Oncological Imaging, University of Oxford, Old Road Campus Research Building, Headington, Oxford OX3 7DQ, United Kingdom.
| |
Collapse
|
9
|
Hadjiiski L, Samala R, Chan HP. Image Processing Analytics: Enhancements and Segmentation. Mol Imaging 2021. [DOI: 10.1016/b978-0-12-816386-3.00057-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022] Open
|
10
|
Das P, Das A. Shift invariant extrema based feature analysis scheme to discriminate the spiculation nature of mammograms. ISA TRANSACTIONS 2020; 103:156-165. [PMID: 32216985 DOI: 10.1016/j.isatra.2020.03.018] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/18/2019] [Revised: 03/11/2020] [Accepted: 03/12/2020] [Indexed: 06/10/2023]
Abstract
Since uncontrolled growth of malignant masses introduces uneven shape irregularities and spiculations in the boundary, shape representing shift invariant features are essential to resolve the problem of discrimination. However, ambiguous nature of shape, size, margin, orientation of masses produces imprecise feature values. In this view, a new concept of extrema based feature characterization scheme is proposed for capturing radiating nature of mass morphology. Computation of extrema patterns needs only few algorithmic steps. Beside this, present study employs an automated enhancement procedure to improve the classification accuracy. Experimental results show that extrema characterization reduces the feature redundancy to produce high efficiency in reasonably low time.
Collapse
Affiliation(s)
- Poulomi Das
- OmDayal Group of Institutions, Maulana Abul Kalam Azad University of Technology, India.
| | - Arpita Das
- Department of Radio Physics and Electronics, University of Calcutta, Rajabazar Science College Campus, India.
| |
Collapse
|
11
|
Perry N, Moss S, Dixon S, Milner S, Mokbel K, Lemech C, Arkenau HT, Duffy S, Pinker K. Mammographic Breast Density and Urbanization: Interactions with BMI, Environmental, Lifestyle, and Other Patient Factors. Diagnostics (Basel) 2020; 10:diagnostics10060418. [PMID: 32575725 PMCID: PMC7344692 DOI: 10.3390/diagnostics10060418] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/28/2020] [Revised: 06/18/2020] [Accepted: 06/18/2020] [Indexed: 12/04/2022] Open
Abstract
Mammographic breast density (MBD) is an important imaging biomarker of breast cancer risk, but it has been suggested that increased MBD is not a genuine finding once corrected for age and body mass index (BMI). This study examined the association of various factors, including both residing in and working in the urban setting, with MBD. Questionnaires were completed by 1144 women attending for mammography at the London Breast Institute in 2012–2013. Breast density was assessed with an automated volumetric breast density measurement system (Volpara) and compared with subjective radiologist assessment. Multivariable linear regression was used to model the relationship between MBD and residence in the urban setting as well as working in the urban setting, adjusting for both age and BMI and other menstrual, reproductive, and lifestyle factors. Urban residence was significantly associated with an increasing percent of MBD, but this association became non-significant when adjusted for age and BMI. This was not the case for women who were both residents in the urban setting and still working. Our results suggest that the association between urban women and increased MBD can be partially explained by their lower BMI, but for women still working, there appear to be other contributing factors.
Collapse
Affiliation(s)
- Nick Perry
- London Breast Institute, Princess Grace Hospital, London W1U 5NY, UK; (S.M.); (K.M.)
- Correspondence: ; Tel.: +44-(0)20-7908-2040
| | - Sue Moss
- Wolfson Institute, Queen Mary University of London, London EC1M 6BQ, UK; (S.M.); (S.D.)
| | | | - Sue Milner
- London Breast Institute, Princess Grace Hospital, London W1U 5NY, UK; (S.M.); (K.M.)
| | - Kefah Mokbel
- London Breast Institute, Princess Grace Hospital, London W1U 5NY, UK; (S.M.); (K.M.)
| | - Charlotte Lemech
- Scientia Clinical Research, Sydney, Australia and Prince of Wales Hospital Clinical School, UNSW, Sydney NSW 2031, Australia;
| | | | - Stephen Duffy
- Wolfson Institute, Queen Mary University of London, London EC1M 6BQ, UK; (S.M.); (S.D.)
| | - Katja Pinker
- Department of Radiology, Breast Imaging Service, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA;
| |
Collapse
|
12
|
Dense-breast classification using image similarity. Radiol Phys Technol 2020; 13:177-186. [PMID: 32377879 DOI: 10.1007/s12194-020-00566-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/04/2018] [Revised: 04/27/2020] [Accepted: 04/29/2020] [Indexed: 10/24/2022]
Abstract
This paper describes the auto-analysis of the mammary gland visualized on mammography images to eliminate the subjective evaluation error between physicians using pixel values and image similarity, including pattern recognition. The mammography images including the heterogeneously dense and extremely dense images were divided into two groups based on the result of the subjective breast classification as the dense breast, and non-dense breast. One hundred and thirty images obtained during screening were set as search images, and 101 evaluation images were classified using zero-mean normalized cross-correlation. Concerning the conventional method, we employed the variance histogram analysis method of Yamazaki et al. The concordance rate for the subjective breast classification result obtained using the conventional and proposed methods was 79.2% and 89.1%. The image similarity evaluation method, which analyzes the pattern of the pixel values, enabled the breast classification while eliminating ambiguity in the subjective breast classifications among physicians.
Collapse
|
13
|
Das P, Das A. A fast and automated segmentation method for detection of masses using folded kernel based fuzzy c-means clustering algorithm. Appl Soft Comput 2019. [DOI: 10.1016/j.asoc.2019.105775] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
|
14
|
George M, Zwiggelaar R. Comparative Study on Local Binary Patterns for Mammographic Density and Risk Scoring. J Imaging 2019; 5:24. [PMID: 34460472 PMCID: PMC8320914 DOI: 10.3390/jimaging5020024] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2018] [Revised: 01/25/2019] [Accepted: 01/28/2019] [Indexed: 11/17/2022] Open
Abstract
Breast density is considered to be one of the major risk factors in developing breast cancer. High breast density can also affect the accuracy of mammographic abnormality detection due to the breast tissue characteristics and patterns. We reviewed variants of local binary pattern descriptors to classify breast tissue which are widely used as texture descriptors for local feature extraction. In our study, we compared the classification results for the variants of local binary patterns such as classic LBP (Local Binary Pattern), ELBP (Elliptical Local Binary Pattern), Uniform ELBP, LDP (Local Directional Pattern) and M-ELBP (Mean-ELBP). A wider comparison with alternative texture analysis techniques was studied to investigate the potential of LBP variants in density classification. In addition, we investigated the effect on classification when using descriptors for the fibroglandular disk region and the whole breast region. We also studied the effect of the Region-of-Interest (ROI) size and location, the descriptor size, and the choice of classifier. The classification results were evaluated based on the MIAS database using a ten-run ten-fold cross validation approach. The experimental results showed that the Elliptical Local Binary Pattern descriptors and Local Directional Patterns extracted most relevant features for mammographic tissue classification indicating the relevance of directional filters. Similarly, the study showed that classification of features from ROIs of the fibroglandular disk region performed better than classification based on the whole breast region.
Collapse
Affiliation(s)
- Minu George
- Department of Computer Science, Aberystwyth University, Aberystwyth SY23 3DB, UK
| | - Reyer Zwiggelaar
- Department of Computer Science, Aberystwyth University, Aberystwyth SY23 3DB, UK
| |
Collapse
|
15
|
Alvarez R, Ridelman E, Rizk N, White MS, Zhou C, Chan HP, Varban OA, Helvie MA, Seeley RJ. Assessment of mammographic breast density after sleeve gastrectomy. Surg Obes Relat Dis 2018; 14:1643-1651. [PMID: 30195656 DOI: 10.1016/j.soard.2018.07.024] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2018] [Accepted: 07/26/2018] [Indexed: 02/06/2023]
Abstract
BACKGROUND Mammographic breast density (BD) is an independent risk factor for breast cancer. The effects of bariatric surgery on BD are unknown. OBJECTIVES To investigate BD changes after sleeve gastrectomy (SG). SETTING University hospital, United States. METHODS Fifty women with mammograms before and after SG performed from 2009 to 2015 were identified after excluding patients with a history of breast cancer, hormone replacement, and/or breast surgery. Patient age, menopausal status, co-morbidities, hemoglobin A1C, and body mass index were collected. Craniocaudal mammographic views before and after SG were interpreted by a blinded radiologist and analyzed by software to obtain breast imaging reporting and data system density categories, breast area, BD, and absolute dense breast area (ADA). Analyses were performed using χ2, McNemar's test, t test, and linear regressions. RESULTS Radiologist interpretation revealed a significant increase in breast imaging reporting and data system B+C category (68% versus 54%; P = .0095) and BD (9.8 ± 7.4% versus 8.3 ± 6.4%; P = .0006) after SG. Software analyses showed a postoperative decrease in breast area (75,398.9 ± 22,941.2 versus 90,655.9 ± 25,621.0 pixels; P < .0001) and ADA (7287.1 ± 3951.3 versus 8204.6 ± 4769.9 pixels; P = .0314) with no significant change in BD. Reduction in ADA was accentuated in postmenopausal patients. Declining breast area was directly correlated with body mass index reduction (R2 = .4495; P < 0.0001). Changes in breast rather than whole body adiposity better explained ADA reduction. Neither diabetes status nor changes in hemoglobin A1C correlated with changes in ADA. CONCLUSIONS ADA decreases after SG, particularly in postmenopausal patients. Software-generated ADA may be more accurate than radiologist-estimated BD or breast imaging reporting and data system for capturing changes in dense breast tissue after SG.
Collapse
Affiliation(s)
- Rafael Alvarez
- Department of Surgery, University of Michigan, Ann Arbor, Michigan.
| | - Elika Ridelman
- Department of Surgery, University of Michigan, Ann Arbor, Michigan
| | - Natalie Rizk
- Department of Surgery, University of Michigan, Ann Arbor, Michigan
| | - Morgan S White
- Medical School, University of Michigan, Ann Arbor, Michigan
| | - Chuan Zhou
- Department of Radiology, University of Michigan, Ann Arbor, Michigan
| | - Heang-Ping Chan
- Department of Radiology, University of Michigan, Ann Arbor, Michigan
| | - Oliver A Varban
- Department of Surgery, University of Michigan, Ann Arbor, Michigan
| | - Mark A Helvie
- Department of Radiology, University of Michigan, Ann Arbor, Michigan
| | - Randy J Seeley
- Department of Surgery, University of Michigan, Ann Arbor, Michigan
| |
Collapse
|
16
|
Li S, Wei J, Chan HP, Helvie MA, Roubidoux MA, Lu Y, Zhou C, Hadjiiski LM, Samala RK. Computer-aided assessment of breast density: comparison of supervised deep learning and feature-based statistical learning. Phys Med Biol 2018; 63:025005. [PMID: 29210358 DOI: 10.1088/1361-6560/aa9f87] [Citation(s) in RCA: 35] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
Breast density is one of the most significant factors that is associated with cancer risk. In this study, our purpose was to develop a supervised deep learning approach for automated estimation of percentage density (PD) on digital mammograms (DMs). The input 'for processing' DMs was first log-transformed, enhanced by a multi-resolution preprocessing scheme, and subsampled to a pixel size of 800 µm × 800 µm from 100 µm × 100 µm. A deep convolutional neural network (DCNN) was trained to estimate a probability map of breast density (PMD) by using a domain adaptation resampling method. The PD was estimated as the ratio of the dense area to the breast area based on the PMD. The DCNN approach was compared to a feature-based statistical learning approach. Gray level, texture and morphological features were extracted and a least absolute shrinkage and selection operator was used to combine the features into a feature-based PMD. With approval of the Institutional Review Board, we retrospectively collected a training set of 478 DMs and an independent test set of 183 DMs from patient files in our institution. Two experienced mammography quality standards act radiologists interactively segmented PD as the reference standard. Ten-fold cross-validation was used for model selection and evaluation with the training set. With cross-validation, DCNN obtained a Dice's coefficient (DC) of 0.79 ± 0.13 and Pearson's correlation (r) of 0.97, whereas feature-based learning obtained DC = 0.72 ± 0.18 and r = 0.85. For the independent test set, DCNN achieved DC = 0.76 ± 0.09 and r = 0.94, while feature-based learning achieved DC = 0.62 ± 0.21 and r = 0.75. Our DCNN approach was significantly better and more robust than the feature-based learning approach for automated PD estimation on DMs, demonstrating its potential use for automated density reporting as well as for model-based risk prediction.
Collapse
Affiliation(s)
- Songfeng Li
- School of Mathematics, Sun Yat-Sen University, Guangzhou 510275, People's Republic of China. School of Data and Computer Science, Sun Yat-Sen University, Guangzhou 510275, People's Republic of China
| | | | | | | | | | | | | | | | | |
Collapse
|
17
|
Rampun A, Morrow PJ, Scotney BW, Winder J. Fully automated breast boundary and pectoral muscle segmentation in mammograms. Artif Intell Med 2017; 79:28-41. [PMID: 28606722 DOI: 10.1016/j.artmed.2017.06.001] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2017] [Revised: 05/25/2017] [Accepted: 06/01/2017] [Indexed: 10/19/2022]
Abstract
Breast and pectoral muscle segmentation is an essential pre-processing step for the subsequent processes in computer aided diagnosis (CAD) systems. Estimating the breast and pectoral boundaries is a difficult task especially in mammograms due to artifacts, homogeneity between the pectoral and breast regions, and low contrast along the skin-air boundary. In this paper, a breast boundary and pectoral muscle segmentation method in mammograms is proposed. For breast boundary estimation, we determine the initial breast boundary via thresholding and employ Active Contour Models without edges to search for the actual boundary. A post-processing technique is proposed to correct the overestimated boundary caused by artifacts. The pectoral muscle boundary is estimated using Canny edge detection and a pre-processing technique is proposed to remove noisy edges. Subsequently, we identify five edge features to find the edge that has the highest probability of being the initial pectoral contour and search for the actual boundary via contour growing. The segmentation results for the proposed method are compared with manual segmentations using 322, 208 and 100mammograms from the Mammographic Image Analysis Society (MIAS), INBreast and Breast Cancer Digital Repository (BCDR) databases, respectively. Experimental results show that the breast boundary and pectoral muscle estimation methods achieved dice similarity coefficients of 98.8% and 97.8% (MIAS), 98.9% and 89.6% (INBreast) and 99.2% and 91.9% (BCDR), respectively.
Collapse
Affiliation(s)
- Andrik Rampun
- School of Computing and Information Engineering, Ulster University, Coleraine, N. Ireland BT52 1SA, United Kingdom.
| | - Philip J Morrow
- School of Computing and Information Engineering, Ulster University, Coleraine, N. Ireland BT52 1SA, United Kingdom.
| | - Bryan W Scotney
- School of Computing and Information Engineering, Ulster University, Coleraine, N. Ireland BT52 1SA, United Kingdom.
| | - John Winder
- School of Health Sciences, Institute of Nursing and Health, Ulster University, Newtownabbey, N. Ireland BT37 0QB, United Kingdom
| |
Collapse
|
18
|
Carneiro PC, Franco MLN, Thomaz RDL, Patrocinio AC. Breast density pattern characterization by histogram features and texture descriptors. ACTA ACUST UNITED AC 2017. [DOI: 10.1590/2446-4740.07916] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
|
19
|
Harvey JA. Quantitative Assessment of Percent Breast Density: Analog versus Digital Acquisition. Technol Cancer Res Treat 2016; 3:611-6. [PMID: 15560719 DOI: 10.1177/153303460400300611] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Abstract
Breast density is a moderate risk factor for breast cancer based on quantitative measurement of percent breast density from film-screen mammograms. In this study, percent breast density was determined using computer-assisted interactive thresholding software from sixty consecutive mammograms of women undergoing digital screening mammography with a prior film-screen mammogram obtained within the last two years. Observations were made regarding discrepancies in density readings. Percent breast density was significantly lower for digital mammograms (mean 32.2%) compared to analog mammograms (mean 40.3%) (p<0.0001). This was not significant for women with less than 20% breast density (range +0.3 to −2.7%), but larger differences were seen with increasing density (12.5–14.9% lower for >50% density). Differences in density readings between analog and digital mammography were largely observed to be due to better recognition of the skin line on digital mammograms resulting in inclusion of more subcutaneous fat. Difficulties with appropriate recognition of subcutaneous breast tissue and fatty tissue near the chest wall were present for both analog and digital mammography. In conclusion, percent breast density is significantly lower when the mammogram is acquired in digital format compared to film-screen, largely due to better recognition of the skin line with resultant inclusion of more subcutaneous fat. Breast cancer risk predictions based on computerized assessment of breast density may be underestimated when applied to digital mammography.
Collapse
Affiliation(s)
- Jennifer A Harvey
- University of Virginia, Department of Radiology, Box 800170, Charlottesville, VA 22908, USA.
| |
Collapse
|
20
|
Otsuka T, Teramoto A, Asada Y, Suzuki S, Fujita H, Kamiya S, Anno H. [Estimation of the Average Glandular Dose Using the Mammary Gland Image Analysis in Mammography]. Nihon Hoshasen Gijutsu Gakkai Zasshi 2016; 72:389-395. [PMID: 27211083 DOI: 10.6009/jjrt.2016_jsrt_72.5.389] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
Currently, the glandular dose is evaluated quantitatively on the basis of the measured data using phantom, and not in a dose based on the mammary gland structure of an individual patient. However, mammary gland structures of the patients are different from each other and mammary gland dose of an individual patient cannot be obtained by the existing methods. In this study, we present an automated estimation method of mammary gland dose by means of mammary structure which is measured automatically using mammogram. In this method, mammary gland structure is extracted by Gabor filter; mammary region is segmented by the automated thresholding. For the evaluation, mammograms of 100 patients diagnosed with category 1 were collected. Using these mammograms we compared the mammary gland ratio measured by proposed method and visual evaluation. As a result, 78% of the total cases were matched. Furthermore, the mammary gland ratio and average glandular dose among the patients with same breast thickness was matched well. These results show that the proposed method may be useful for the estimation of average glandular dose for the individual patients.
Collapse
|
21
|
Chen JH, Lee YW, Chan SW, Yeh DC, Chang RF. Breast Density Analysis with Automated Whole-Breast Ultrasound: Comparison with 3-D Magnetic Resonance Imaging. ULTRASOUND IN MEDICINE & BIOLOGY 2016; 42:1211-1220. [PMID: 26831342 DOI: 10.1016/j.ultrasmedbio.2015.12.015] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/06/2015] [Revised: 10/28/2015] [Accepted: 12/16/2015] [Indexed: 06/05/2023]
Abstract
In this study, a semi-automatic breast segmentation method was proposed on the basis of the rib shadow to extract breast regions from 3-D automated whole-breast ultrasound (ABUS) images. The density results were correlated with breast density values acquired with 3-D magnetic resonance imaging (MRI). MRI images of 46 breasts were collected from 23 women without a history of breast disease. Each subject also underwent ABUS. We used Otsu's thresholding method on ABUS images to obtain local rib shadow information, which was combined with the global rib shadow information (extracted from all slice projections) and integrated with the anatomy's breast tissue structure to determine the chest wall line. The fuzzy C-means classifier was used to extract the fibroglandular tissues from the acquired images. Whole-breast volume (WBV) and breast percentage density (BPD) were calculated in both modalities. Linear regression was used to compute the correlation of density results between the two modalities. The consistency of density measurement was also analyzed on the basis of intra- and inter-operator variation. There was a high correlation of density results between MRI and ABUS (R(2) = 0.798 for WBV, R(2) = 0.825 for PBD). The mean WBV from ABUS images was slightly smaller than the mean WBV from MR images (MRI: 342.24 ± 128.08 cm(3), ABUS: 325.47 ± 136.16 cm(3), p < 0.05). In addition, the BPD calculated from MR images was smaller than the BPD from ABUS images (MRI: 24.71 ± 15.16%, ABUS: 28.90 ± 17.73%, p < 0.05). The intra-operator and inter-operator variant analysis results indicated that there was no statistically significant difference in breast density measurement variation between the two modalities. Our results revealed a high correlation in WBV and BPD between MRI and ABUS. Our study suggests that ABUS provides breast density information useful in the assessment of breast health.
Collapse
Affiliation(s)
- Jeon-Hor Chen
- Tu & Yuen Center for Functional Onco-Imaging, Department of Radiological Sciences, University of California, Irvine, California, USA; Department of Radiology, E-Da Hospital and I-Shou University, Kaohsiung, Taiwan
| | - Yan-Wei Lee
- Department of Computer Science and Information Engineering, National Taiwan University, Taipei, Taiwan
| | - Si-Wa Chan
- Department of Radiology, Taichung Veterans General Hospital, Taichung, Taiwan; Graduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan University, Taipei, Taiwan
| | - Dah-Cherng Yeh
- Breast Center, Taichung Veterans General Hospital, Taichung, Taiwan
| | - Ruey-Feng Chang
- Department of Computer Science and Information Engineering, National Taiwan University, Taipei, Taiwan; Graduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan University, Taipei, Taiwan.
| |
Collapse
|
22
|
Inter- and intra-observer agreement of BI-RADS-based subjective visual estimation of amount of fibroglandular breast tissue with magnetic resonance imaging: comparison to automated quantitative assessment. Eur Radiol 2016; 26:3917-3922. [PMID: 27108300 PMCID: PMC5052327 DOI: 10.1007/s00330-016-4274-x] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/24/2015] [Revised: 01/31/2016] [Accepted: 02/05/2016] [Indexed: 11/24/2022]
Abstract
Purpose To evaluate the inter-/intra-observer agreement of BI-RADS-based subjective visual estimation of the amount of fibroglandular tissue (FGT) with magnetic resonance imaging (MRI), and to investigate whether FGT assessment benefits from an automated, observer-independent, quantitative MRI measurement by comparing both approaches. Materials and methods Eighty women with no imaging abnormalities (BI-RADS 1 and 2) were included in this institutional review board (IRB)-approved prospective study. All women underwent un-enhanced breast MRI. Four radiologists independently assessed FGT with MRI by subjective visual estimation according to BI-RADS. Automated observer-independent quantitative measurement of FGT with MRI was performed using a previously described measurement system. Inter-/intra-observer agreements of qualitative and quantitative FGT measurements were assessed using Cohen’s kappa (k). Results Inexperienced readers achieved moderate inter-/intra-observer agreement and experienced readers a substantial inter- and perfect intra-observer agreement for subjective visual estimation of FGT. Practice and experience reduced observer-dependency. Automated observer-independent quantitative measurement of FGT was successfully performed and revealed only fair to moderate agreement (k = 0.209–0.497) with subjective visual estimations of FGT. Conclusion Subjective visual estimation of FGT with MRI shows moderate intra-/inter-observer agreement, which can be improved by practice and experience. Automated observer-independent quantitative measurements of FGT are necessary to allow a standardized risk evaluation. Key Points • Subjective FGT estimation with MRI shows moderate intra-/inter-observer agreement in inexperienced readers. • Inter-observer agreement can be improved by practice and experience. • Automated observer-independent quantitative measurements can provide reliable and standardized assessment of FGT with MRI.
Collapse
|
23
|
Pahwa S, Hari S, Thulkar S, Angraal S. Evaluation of breast parenchymal density with QUANTRA software. Indian J Radiol Imaging 2016; 25:391-6. [PMID: 26752820 PMCID: PMC4693388 DOI: 10.4103/0971-3026.169458] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023] Open
Abstract
PURPOSE To evaluate breast parenchymal density using QUANTRA software and to correlate numerical breast density values obtained from QUANTRA with ACR BI-RADS breast density categories. MATERIALS AND METHODS Two-view digital mammograms of 545 consecutive women (mean age - 47.7 years) were categorized visually by three independent radiologists into one of the four ACR BI-RADS categories (D1-D4). Numerical breast density values as obtained by QUANTRA software were then used to establish the cutoff values for each category using receiver operator characteristic (ROC) analysis. RESULTS Numerical breast density values obtained by QUANTRA (range - 7-42%) were systematically lower than visual estimates. QUANTRA breast density value of less than 14.5% could accurately differentiate category D1 from the categories D2, D3, and D4 [area under curve (AUC) on ROC analysis - 94.09%, sensitivity - 85.71%, specificity - 84.21%]. QUANTRA density values of <19.5% accurately differentiated categories D1 and D2 from D3 and D4 (AUC - 94.4%, sensitivity - 87.50%, specificity - 84.60%); QUANTRA density values of <26.5% accurately differentiated categories D1, D2, and D3 from category D4 (AUC - 90.75%, sensitivity - 88.89%, specificity - 88.621%). CONCLUSIONS Breast density values obtained by QUANTRA software can be used to obtain objective cutoff values for each ACR BI-RADS breast density category. Although the numerical density values obtained by QUANTRA are lower than visual estimates, they correlate well with the BI-RADS breast density categories assigned visually to the mammograms.
Collapse
Affiliation(s)
- Shivani Pahwa
- Department of Radiodiagnosis, All India Institute of Medical Sciences, New Delhi, India
| | - Smriti Hari
- Department of Radiodiagnosis, All India Institute of Medical Sciences, New Delhi, India
| | - Sanjay Thulkar
- Department of Radiodiagnosis, All India Institute of Medical Sciences, New Delhi, India
| | - Suveen Angraal
- Department of Radiodiagnosis, All India Institute of Medical Sciences, New Delhi, India
| |
Collapse
|
24
|
Application of Statistical Texture Features for Breast Tissue Density Classification. IMAGE FEATURE DETECTORS AND DESCRIPTORS 2016. [DOI: 10.1007/978-3-319-28854-3_16] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
|
25
|
Damases CN, Brennan PC, Mello-Thoms C, McEntee MF. Mammographic Breast Density Assessment Using Automated Volumetric Software and Breast Imaging Reporting and Data System (BIRADS) Categorization by Expert Radiologists. Acad Radiol 2016; 23:70-7. [PMID: 26514436 DOI: 10.1016/j.acra.2015.09.011] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2015] [Revised: 08/31/2015] [Accepted: 09/16/2015] [Indexed: 11/30/2022]
Abstract
RATIONALE AND OBJECTIVES To investigate agreement on mammographic breast density (MD) assessment between automated volumetric software and Breast Imaging Reporting and Data System (BIRADS) categorization by expert radiologists. MATERIALS AND METHODS Forty cases of left craniocaudal and mediolateral oblique mammograms from 20 women were used. All images had their volumetric density classified using Volpara density grade (VDG) and average volumetric breast density percentage. The same images were then classified into BIRADS categories (I-IV) by 20 American Board of Radiology examiners. RESULTS The results demonstrated a moderate agreement (κ = 0.537; 95% CI = 0.234-0.699) between VDG classification and radiologists' BIRADS density assessment. Interreader agreement using BIRADS also demonstrated moderate agreement (κ = 0.565; 95% CI = 0.519-0.610) ranging from 0.328 to 0.669. Radiologists' average BIRADS was lower than average VDG scores by 0.33, with their mean being 2.13, whereas the mean VDG was 2.48 (U = -3.742; P < 0.001). VDG and BIRADS showed a very strong positive correlation (ρ = 0.91; P < 0.001) as did BIRADS and average volumetric breast density percentage (ρ = 0.94; P < 0.001). CONCLUSIONS Automated volumetric breast density assessment shows moderate agreement and very strong correlation with BIRADS; interreader variations still exist within BIRADS. Because of the increasing importance of MD measurement in clinical management of patients, widely accepted, reproducible, and accurate measures of MD are required.
Collapse
Affiliation(s)
- Christine N Damases
- Faculty of Health Sciences, Discipline of Medical Radiation Sciences and Brain and Mind Research Institute, M205, Cumberland Campus, The University of Sydney, 75 East St, Room M205, Lidcombe, Sydney, NSW 2141, Australia; Faculty of Health Sciences, Department of Radiography, University of Namibia, M-Block, Room M-105, Mandume Ndemufayo Avenue, Private Bag 13310, Windhoek 9000, Namibia.
| | - Patrick C Brennan
- Faculty of Health Sciences, Discipline of Medical Radiation Sciences and Brain and Mind Research Institute, M205, Cumberland Campus, The University of Sydney, 75 East St, Room M205, Lidcombe, Sydney, NSW 2141, Australia
| | - Claudia Mello-Thoms
- Faculty of Health Sciences, Discipline of Medical Radiation Sciences and Brain and Mind Research Institute, M205, Cumberland Campus, The University of Sydney, 75 East St, Room M205, Lidcombe, Sydney, NSW 2141, Australia
| | - Mark F McEntee
- Faculty of Health Sciences, Discipline of Medical Radiation Sciences and Brain and Mind Research Institute, M205, Cumberland Campus, The University of Sydney, 75 East St, Room M205, Lidcombe, Sydney, NSW 2141, Australia
| |
Collapse
|
26
|
Kriti, Virmani J. Comparison of CAD Systems for Three Class Breast Tissue Density Classification Using Mammographic Images. MEDICAL IMAGING IN CLINICAL APPLICATIONS 2016. [DOI: 10.1007/978-3-319-33793-7_5] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
|
27
|
Imaging Breast Density: Established and Emerging Modalities. Transl Oncol 2015; 8:435-45. [PMID: 26692524 PMCID: PMC4700291 DOI: 10.1016/j.tranon.2015.10.002] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2015] [Revised: 09/30/2015] [Accepted: 10/06/2015] [Indexed: 11/23/2022] Open
Abstract
Mammographic density has been proven as an independent risk factor for breast cancer. Women with dense breast tissue visible on a mammogram have a much higher cancer risk than women with little density. A great research effort has been devoted to incorporate breast density into risk prediction models to better estimate each individual’s cancer risk. In recent years, the passage of breast density notification legislation in many states in USA requires that every mammography report should provide information regarding the patient’s breast density. Accurate definition and measurement of breast density are thus important, which may allow all the potential clinical applications of breast density to be implemented. Because the two-dimensional mammography-based measurement is subject to tissue overlapping and thus not able to provide volumetric information, there is an urgent need to develop reliable quantitative measurements of breast density. Various new imaging technologies are being developed. Among these new modalities, volumetric mammographic density methods and three-dimensional magnetic resonance imaging are the most well studied. Besides, emerging modalities, including different x-ray–based, optical imaging, and ultrasound-based methods, have also been investigated. All these modalities may either overcome some fundamental problems related to mammographic density or provide additional density and/or compositional information. The present review article aimed to summarize the current established and emerging imaging techniques for the measurement of breast density and the evidence of the clinical use of these density methods from the literature.
Collapse
|
28
|
Ng KH, Lau S. Vision 20/20: Mammographic breast density and its clinical applications. Med Phys 2015; 42:7059-77. [PMID: 26632060 DOI: 10.1118/1.4935141] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022] Open
Affiliation(s)
- Kwan-Hoong Ng
- Department of Biomedical Imaging and University of Malaya Research Imaging Centre, Faculty of Medicine, University of Malaya, 50603 Kuala Lumpur, Malaysia
| | - Susie Lau
- Department of Biomedical Imaging and University of Malaya Research Imaging Centre, Faculty of Medicine, University of Malaya, 50603 Kuala Lumpur, Malaysia
| |
Collapse
|
29
|
Stone J, Thompson DJ, Dos Santos Silva I, Scott C, Tamimi RM, Lindstrom S, Kraft P, Hazra A, Li J, Eriksson L, Czene K, Hall P, Jensen M, Cunningham J, Olson JE, Purrington K, Couch FJ, Brown J, Leyland J, Warren RML, Luben RN, Khaw KT, Smith P, Wareham NJ, Jud SM, Heusinger K, Beckmann MW, Douglas JA, Shah KP, Chan HP, Helvie MA, Le Marchand L, Kolonel LN, Woolcott C, Maskarinec G, Haiman C, Giles GG, Baglietto L, Krishnan K, Southey MC, Apicella C, Andrulis IL, Knight JA, Ursin G, Alnaes GIG, Kristensen VN, Borresen-Dale AL, Gram IT, Bolla MK, Wang Q, Michailidou K, Dennis J, Simard J, Pharoah P, Dunning AM, Easton DF, Fasching PA, Pankratz VS, Hopper JL, Vachon CM. Novel Associations between Common Breast Cancer Susceptibility Variants and Risk-Predicting Mammographic Density Measures. Cancer Res 2015; 75:2457-67. [PMID: 25862352 PMCID: PMC4470785 DOI: 10.1158/0008-5472.can-14-2012] [Citation(s) in RCA: 51] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/11/2014] [Accepted: 03/10/2015] [Indexed: 12/30/2022]
Abstract
Mammographic density measures adjusted for age and body mass index (BMI) are heritable predictors of breast cancer risk, but few mammographic density-associated genetic variants have been identified. Using data for 10,727 women from two international consortia, we estimated associations between 77 common breast cancer susceptibility variants and absolute dense area, percent dense area and absolute nondense area adjusted for study, age, and BMI using mixed linear modeling. We found strong support for established associations between rs10995190 (in the region of ZNF365), rs2046210 (ESR1), and rs3817198 (LSP1) and adjusted absolute and percent dense areas (all P < 10(-5)). Of 41 recently discovered breast cancer susceptibility variants, associations were found between rs1432679 (EBF1), rs17817449 (MIR1972-2: FTO), rs12710696 (2p24.1), and rs3757318 (ESR1) and adjusted absolute and percent dense areas, respectively. There were associations between rs6001930 (MKL1) and both adjusted absolute dense and nondense areas, and between rs17356907 (NTN4) and adjusted absolute nondense area. Trends in all but two associations were consistent with those for breast cancer risk. Results suggested that 18% of breast cancer susceptibility variants were associated with at least one mammographic density measure. Genetic variants at multiple loci were associated with both breast cancer risk and the mammographic density measures. Further understanding of the underlying mechanisms at these loci could help identify etiologic pathways implicated in how mammographic density predicts breast cancer risk.
Collapse
Affiliation(s)
- Jennifer Stone
- Centre for Genetic Origins of Health and Disease, University of Western Australia, Crawley, Western Australia, Australia
| | - Deborah J Thompson
- Centre for Cancer Genetic Epidemiology, Department of Public Health and Primary Care, University of Cambridge, Cambridge, United Kingdom
| | - Isabel Dos Santos Silva
- Department of Epidemiology and Population Health, London School of Hygiene and Tropical Medicine, London, United Kingdom
| | - Christopher Scott
- Department of Health Sciences Research, Division of Biostatistics, Mayo Clinic College of Medicine, Rochester, Minnesota
| | - Rulla M Tamimi
- Channing Laboratory, Department of Medicine, Brigham and Women's Hospital, Boston, Massachusetts. Department of Epidemiology, Harvard T.H. Chan School of Public Health, Boston, Massachusetts
| | - Sara Lindstrom
- Department of Epidemiology, Harvard T.H. Chan School of Public Health, Boston, Massachusetts. Program in Genetic Epidemiology and Statistical Genetics, Harvard School of Public Health, Boston, Massachusetts
| | - Peter Kraft
- Department of Epidemiology, Harvard T.H. Chan School of Public Health, Boston, Massachusetts. Program in Genetic Epidemiology and Statistical Genetics, Harvard School of Public Health, Boston, Massachusetts. Department of Biostatistics, Harvard T.H. Chan School of Public Health, Boston, Massachusetts
| | - Aditi Hazra
- Department of Epidemiology, Harvard T.H. Chan School of Public Health, Boston, Massachusetts
| | - Jingmei Li
- Department of Medical Epidemiology and Biostatistics, Karolinska Institutet, Stockholm, Sweden. Human Genetics, Genome Institute of Singapore, Singapore, Singapore
| | - Louise Eriksson
- Department of Medical Epidemiology and Biostatistics, Karolinska Institutet, Stockholm, Sweden
| | - Kamila Czene
- Department of Medical Epidemiology and Biostatistics, Karolinska Institutet, Stockholm, Sweden
| | - Per Hall
- Department of Medical Epidemiology and Biostatistics, Karolinska Institutet, Stockholm, Sweden
| | - Matt Jensen
- Department of Health Sciences Research, Division of Biostatistics, Mayo Clinic College of Medicine, Rochester, Minnesota
| | - Julie Cunningham
- Department of Laboratory Medicine and Pathology, Division of Experimental Pathology, Mayo Clinic College of Medicine, Rochester, Minnesota
| | - Janet E Olson
- Department of Health Sciences Research, Division of Epidemiology, Mayo Clinic, Rochester, Minnesota
| | - Kristen Purrington
- Department of Oncology, Wayne State University School of Medicine and Karmanos Cancer Institute, Detroit, Michigan
| | - Fergus J Couch
- Department of Laboratory Medicine and Pathology, Division of Experimental Pathology, Mayo Clinic College of Medicine, Rochester, Minnesota. Department of Health Sciences Research, Division of Epidemiology, Mayo Clinic, Rochester, Minnesota
| | - Judith Brown
- Centre for Cancer Genetic Epidemiology, Department of Public Health and Primary Care, University of Cambridge, Cambridge, United Kingdom
| | - Jean Leyland
- Centre for Cancer Genetic Epidemiology, Department of Public Health and Primary Care, University of Cambridge, Cambridge, United Kingdom
| | - Ruth M L Warren
- Department of Radiology, University of Cambridge, Addenbrooke's NHS Foundation Trust, Cambridge, United Kingdom
| | - Robert N Luben
- Department of Public Health and Primary Care, University of Cambridge, Cambridge, United Kingdom
| | - Kay-Tee Khaw
- MRC Centre for Nutritional Epidemiology in Cancer Prevention and Survival (CNC), University of Cambridge, Cambridge, United Kingdom
| | - Paula Smith
- Department of Psychiatry, University of Cambridge, Cambridge, United Kingdom
| | - Nicholas J Wareham
- MRC Epidemiology Unit, University of Cambridge, Cambridge, United Kingdom
| | - Sebastian M Jud
- University Breast Center Franconia, Department of Gynecology and Obstetrics, University Hospital Erlangen, Friedrich-Alexander University Erlangen-Nuremberg, Comprehensive Cancer Center Erlangen-Nuremberg, Erlangen-Nuremberg, Germany
| | - Katharina Heusinger
- University Breast Center Franconia, Department of Gynecology and Obstetrics, University Hospital Erlangen, Friedrich-Alexander University Erlangen-Nuremberg, Comprehensive Cancer Center Erlangen-Nuremberg, Erlangen-Nuremberg, Germany
| | - Matthias W Beckmann
- University Breast Center Franconia, Department of Gynecology and Obstetrics, University Hospital Erlangen, Friedrich-Alexander University Erlangen-Nuremberg, Comprehensive Cancer Center Erlangen-Nuremberg, Erlangen-Nuremberg, Germany
| | - Julie A Douglas
- Department of Human Genetics, University of Michigan Medical School, Ann Arbor, Michigan
| | - Kaanan P Shah
- Department of Human Genetics, University of Michigan Medical School, Ann Arbor, Michigan
| | - Heang-Ping Chan
- Department of Radiology, University of Michigan Medical School, Ann Arbor, Michigan
| | - Mark A Helvie
- Department of Radiology, University of Michigan Medical School, Ann Arbor, Michigan
| | | | | | - Christy Woolcott
- Department of Obstetrics and Genecology, IWK Health Centre, Halifax, Canada
| | | | - Christopher Haiman
- Keck School of Medicine, University of Southern California, Los Angeles, California
| | - Graham G Giles
- Cancer Epidemiology Centre, Cancer Council Victoria, Melbourne, Australia. Centre for Epidemiology and Biostatistics, Melbourne School of Population and Global Health, The University of Melbourne, Melbourne, Australia
| | - Laura Baglietto
- Cancer Epidemiology Centre, Cancer Council Victoria, Melbourne, Australia. Centre for Epidemiology and Biostatistics, Melbourne School of Population and Global Health, The University of Melbourne, Melbourne, Australia. Centre for Research in Epidemiology and Population Health, Gustave Roussy Institute, Villejuif Cedex, France. Paris-South University, Villejuif, France
| | - Kavitha Krishnan
- Centre for Epidemiology and Biostatistics, Melbourne School of Population and Global Health, The University of Melbourne, Melbourne, Australia
| | - Melissa C Southey
- Department of Pathology, University of Melbourne, Melbourne, Australia
| | - Carmel Apicella
- Centre for Epidemiology and Biostatistics, Melbourne School of Population and Global Health, The University of Melbourne, Melbourne, Australia
| | - Irene L Andrulis
- Center for Cancer Genetics, Lunenfeld-Tanenbaum Research Institute, Mount Sinai Hospital, Toronto, Ontario, Canada. Department of Molecular Genetics, University of Toronto, Toronto, Ontario, Canada
| | - Julia A Knight
- Prosserman Centre for Health Research, Lunenfeld-Tanenbaum Research Institute, Mount Sinai Hospital, Toronto, Canada. Dalla Lana School of Public Health, University of Toronto, Toronto, Ontario, Canada
| | - Giske Ursin
- Institute of Basic Medical Sciences, University of Oslo, Norway. Department of Preventive Medicine, University of Southern California, California
| | - Grethe I Grenaker Alnaes
- Department of Genetics, Institute for Cancer Research, The Norwegian Radium Hospital, Montebello, Oslo, Norway
| | - Vessela N Kristensen
- Department of Genetics, Institute for Cancer Research, The Norwegian Radium Hospital, Montebello, Oslo, Norway
| | - Anne-Lise Borresen-Dale
- Department of Genetics, Institute for Cancer Research, The Norwegian Radium Hospital, Montebello, Oslo, Norway
| | - Inger Torhild Gram
- Faculty of Health Sciences, Department of Community Medicine, UiT The Arctic University of Norway, Tromsø, Norway
| | - Manjeet K Bolla
- Centre for Cancer Genetic Epidemiology, Department of Public Health and Primary Care, University of Cambridge, Cambridge, United Kingdom
| | - Qin Wang
- Faculty of Health Sciences, Department of Community Medicine, UiT The Arctic University of Norway, Tromsø, Norway
| | - Kyriaki Michailidou
- Centre for Cancer Genetic Epidemiology, Department of Public Health and Primary Care, University of Cambridge, Cambridge, United Kingdom
| | - Joe Dennis
- Centre for Cancer Genetic Epidemiology, Department of Public Health and Primary Care, University of Cambridge, Cambridge, United Kingdom
| | - Jacques Simard
- Centre Hospitalier Universitaire de Québec Research Center and Laval University, Quebec, Canada
| | - Paul Pharoah
- Centre for Cancer Genetic Epidemiology, Department of Public Health and Primary Care, University of Cambridge, Cambridge, United Kingdom. Centre for Cancer Genetic Epidemiology, Department of Oncology, University of Cambridge, Cambridge, United Kingdom
| | - Alison M Dunning
- Centre for Cancer Genetic Epidemiology, Department of Oncology, University of Cambridge, Cambridge, United Kingdom
| | - Douglas F Easton
- Centre for Cancer Genetic Epidemiology, Department of Public Health and Primary Care, University of Cambridge, Cambridge, United Kingdom. Centre for Cancer Genetic Epidemiology, Department of Oncology, University of Cambridge, Cambridge, United Kingdom
| | - Peter A Fasching
- University Breast Center Franconia, Department of Gynecology and Obstetrics, University Hospital Erlangen, Friedrich-Alexander University Erlangen-Nuremberg, Comprehensive Cancer Center Erlangen-Nuremberg, Erlangen-Nuremberg, Germany. Department of Medicine, Division of Hematology and Oncology, David Geffen School of Medicine, University of California at Los Angeles, Los Angeles, California
| | - V Shane Pankratz
- Department of Health Sciences Research, Division of Biostatistics, Mayo Clinic College of Medicine, Rochester, Minnesota
| | - John L Hopper
- Centre for Epidemiology and Biostatistics, Melbourne School of Population and Global Health, The University of Melbourne, Melbourne, Australia
| | - Celine M Vachon
- Department of Health Sciences Research, Division of Epidemiology, Mayo Clinic, Rochester, Minnesota.
| |
Collapse
|
30
|
He W, Juette A, Denton ERE, Oliver A, Martí R, Zwiggelaar R. A Review on Automatic Mammographic Density and Parenchymal Segmentation. Int J Breast Cancer 2015; 2015:276217. [PMID: 26171249 PMCID: PMC4481086 DOI: 10.1155/2015/276217] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/13/2015] [Revised: 04/21/2015] [Accepted: 05/17/2015] [Indexed: 01/03/2023] Open
Abstract
Breast cancer is the most frequently diagnosed cancer in women. However, the exact cause(s) of breast cancer still remains unknown. Early detection, precise identification of women at risk, and application of appropriate disease prevention measures are by far the most effective way to tackle breast cancer. There are more than 70 common genetic susceptibility factors included in the current non-image-based risk prediction models (e.g., the Gail and the Tyrer-Cuzick models). Image-based risk factors, such as mammographic densities and parenchymal patterns, have been established as biomarkers but have not been fully incorporated in the risk prediction models used for risk stratification in screening and/or measuring responsiveness to preventive approaches. Within computer aided mammography, automatic mammographic tissue segmentation methods have been developed for estimation of breast tissue composition to facilitate mammographic risk assessment. This paper presents a comprehensive review of automatic mammographic tissue segmentation methodologies developed over the past two decades and the evidence for risk assessment/density classification using segmentation. The aim of this review is to analyse how engineering advances have progressed and the impact automatic mammographic tissue segmentation has in a clinical environment, as well as to understand the current research gaps with respect to the incorporation of image-based risk factors in non-image-based risk prediction models.
Collapse
Affiliation(s)
- Wenda He
- Department of Computer Science, Aberystwyth University, Aberystwyth SY23 3DB, UK
| | - Arne Juette
- Department of Radiology, Norfolk & Norwich University Hospital, Norwich NR4 7UY, UK
| | - Erika R. E. Denton
- Department of Radiology, Norfolk & Norwich University Hospital, Norwich NR4 7UY, UK
| | - Arnau Oliver
- Department of Architecture and Computer Technology, University of Girona, 17071 Girona, Spain
| | - Robert Martí
- Department of Architecture and Computer Technology, University of Girona, 17071 Girona, Spain
| | - Reyer Zwiggelaar
- Department of Computer Science, Aberystwyth University, Aberystwyth SY23 3DB, UK
| |
Collapse
|
31
|
Kim Y, Hong BW, Kim SJ, Kim JH. A population-based tissue probability map-driven level set method for fully automated mammographic density estimations. Med Phys 2015; 41:071905. [PMID: 24989383 DOI: 10.1118/1.4881525] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
Abstract
PURPOSE A major challenge when distinguishing glandular tissues on mammograms, especially for area-based estimations, lies in determining a boundary on a hazy transition zone from adipose to glandular tissues. This stems from the nature of mammography, which is a projection of superimposed tissues consisting of different structures. In this paper, the authors present a novel segmentation scheme which incorporates the learned prior knowledge of experts into a level set framework for fully automated mammographic density estimations. METHODS The authors modeled the learned knowledge as a population-based tissue probability map (PTPM) that was designed to capture the classification of experts' visual systems. The PTPM was constructed using an image database of a selected population consisting of 297 cases. Three mammogram experts extracted regions for dense and fatty tissues on digital mammograms, which was an independent subset used to create a tissue probability map for each ROI based on its local statistics. This tissue class probability was taken as a prior in the Bayesian formulation and was incorporated into a level set framework as an additional term to control the evolution and followed the energy surface designed to reflect experts' knowledge as well as the regional statistics inside and outside of the evolving contour. RESULTS A subset of 100 digital mammograms, which was not used in constructing the PTPM, was used to validate the performance. The energy was minimized when the initial contour reached the boundary of the dense and fatty tissues, as defined by experts. The correlation coefficient between mammographic density measurements made by experts and measurements by the proposed method was 0.93, while that with the conventional level set was 0.47. CONCLUSIONS The proposed method showed a marked improvement over the conventional level set method in terms of accuracy and reliability. This result suggests that the proposed method successfully incorporated the learned knowledge of the experts' visual systems and has potential to be used as an automated and quantitative tool for estimations of mammographic breast density levels.
Collapse
Affiliation(s)
- Youngwoo Kim
- Interdisciplinary Program of Radiation Applied Life Science, Seoul National University College of Medicine, Seoul, South Korea 110-744 and Center for Medical-IT Convergence Technology Research, Advanced Institutes of Convergence Technology, Suwon, South Korea 443-270
| | - Byung Woo Hong
- School of Computer Science and Engineering, Chung-Ang University, Seoul, South Korea 156-756
| | - Seung Ja Kim
- Department of Radiology, Seoul Metropolitan Government Seoul National University Boramae Medical Center, Seoul, South Korea 156-756
| | - Jong Hyo Kim
- Center for Medical-IT Convergence Technology Research, Advanced Institutes of Convergence Technology, Suwon, South Korea 443-270; Department of Radiology, Institute of Radiation Medicine, Seoul National University College of Medicine, 28, Yongon-dong, Chongno-gu, Seoul, 110-744, Korea; and Department of Transdisciplinary Studies, Graduate School of Convergence Science and Technology, Seoul National University, Seoul, South Korea 110-744
| |
Collapse
|
32
|
Martínez Gómez I, Casals el Busto M, Antón Guirao J, Ruiz Perales F, Llobet Azpitarte R. Estimación semiautomática de la densidad mamaria con DM-Scan. RADIOLOGIA 2014; 56:429-34. [DOI: 10.1016/j.rx.2012.11.007] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/27/2012] [Revised: 11/20/2012] [Accepted: 11/22/2012] [Indexed: 10/27/2022]
|
33
|
Llobet R, Pollán M, Antón J, Miranda-García J, Casals M, Martínez I, Ruiz-Perales F, Pérez-Gómez B, Salas-Trejo D, Pérez-Cortés JC. Semi-automated and fully automated mammographic density measurement and breast cancer risk prediction. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 2014; 116:105-115. [PMID: 24636804 DOI: 10.1016/j.cmpb.2014.01.021] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/03/2013] [Revised: 10/06/2013] [Accepted: 01/27/2014] [Indexed: 06/03/2023]
Abstract
The task of breast density quantification is becoming increasingly relevant due to its association with breast cancer risk. In this work, a semi-automated and a fully automated tools to assess breast density from full-field digitized mammograms are presented. The first tool is based on a supervised interactive thresholding procedure for segmenting dense from fatty tissue and is used with a twofold goal: for assessing mammographic density (MD) in a more objective and accurate way than via visual-based methods and for labeling the mammograms that are later employed to train the fully automated tool. Although most automated methods rely on supervised approaches based on a global labeling of the mammogram, the proposed method relies on pixel-level labeling, allowing better tissue classification and density measurement on a continuous scale. The fully automated method presented combines a classification scheme based on local features and thresholding operations that improve the performance of the classifier. A dataset of 655 mammograms was used to test the concordance of both approaches in measuring MD. Three expert radiologists measured MD in each of the mammograms using the semi-automated tool (DM-Scan). It was then measured by the fully automated system and the correlation between both methods was computed. The relation between MD and breast cancer was then analyzed using a case-control dataset consisting of 230 mammograms. The Intraclass Correlation Coefficient (ICC) was used to compute reliability among raters and between techniques. The results obtained showed an average ICC=0.922 among raters when using the semi-automated tool, whilst the average correlation between the semi-automated and automated measures was ICC=0.838. In the case-control study, the results obtained showed Odds Ratios (OR) of 1.38 and 1.50 per 10% increase in MD when using the semi-automated and fully automated approaches respectively. It can therefore be concluded that the automated and semi-automated MD assessments present a good correlation. Both the methods also found an association between MD and breast cancer risk, which warrants the proposed tools for breast cancer risk prediction and clinical decision making. A full version of the DM-Scan is freely available.
Collapse
Affiliation(s)
- Rafael Llobet
- Institute of Computer Technology, Universitat Politècnica de València, Camino de Vera s/n, 46022 Valencia, Spain.
| | - Marina Pollán
- National Center for Epidemiology, Carlos III Institute of Health, Monforte de Lemos 5, Madrid 28029, Spain; Consortium for Biomedical Research in Epidemiology and Public Health (CIBER en Epidemiología y Salud Pública - CIBERESP), Carlos III Institute of Health, Monforte de Lemos 5, Madrid 28029, Spain.
| | - Joaquín Antón
- Institute of Computer Technology, Universitat Politècnica de València, Camino de Vera s/n, 46022 Valencia, Spain.
| | - Josefa Miranda-García
- Valencian Breast Cancer Screening Program, General Directorate of Public Health, Valencia, Spain; Centro Superior de Investigación en Salud Pública CSISP, FISABIO, Valencia, Spain.
| | - María Casals
- Valencian Breast Cancer Screening Program, General Directorate of Public Health, Valencia, Spain; Centro Superior de Investigación en Salud Pública CSISP, FISABIO, Valencia, Spain.
| | - Inmaculada Martínez
- Valencian Breast Cancer Screening Program, General Directorate of Public Health, Valencia, Spain; Centro Superior de Investigación en Salud Pública CSISP, FISABIO, Valencia, Spain.
| | - Francisco Ruiz-Perales
- Valencian Breast Cancer Screening Program, General Directorate of Public Health, Valencia, Spain; Centro Superior de Investigación en Salud Pública CSISP, FISABIO, Valencia, Spain.
| | - Beatriz Pérez-Gómez
- Institute of Computer Technology, Universitat Politècnica de València, Camino de Vera s/n, 46022 Valencia, Spain; National Center for Epidemiology, Carlos III Institute of Health, Monforte de Lemos 5, Madrid 28029, Spain.
| | - Dolores Salas-Trejo
- Valencian Breast Cancer Screening Program, General Directorate of Public Health, Valencia, Spain; Centro Superior de Investigación en Salud Pública CSISP, FISABIO, Valencia, Spain.
| | - Juan-Carlos Pérez-Cortés
- Institute of Computer Technology, Universitat Politècnica de València, Camino de Vera s/n, 46022 Valencia, Spain.
| |
Collapse
|
34
|
Tagliafico AS, Tagliafico G. Fascicular ratio: a new parameter to evaluate peripheral nerve pathology on magnetic resonance imaging: a feasibility study on a 3T MRI system. Medicine (Baltimore) 2014; 93:e68. [PMID: 25255018 PMCID: PMC4616287 DOI: 10.1097/md.0000000000000068] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 05/27/2014] [Revised: 07/07/2014] [Accepted: 07/07/2014] [Indexed: 12/21/2022] Open
Abstract
The objective of the study was to define and quantitatively evaluate the fascicular ratio (FR) on magnetic resonance imaging (MRI) in patients with peripheral neuropathies compared with healthy controls. Forty control subjects (20 women, 20 men; age, 44.6 ± 13.4 years) and 40 patients with peripheral neuropathy (22 women, 18 men; age, 50.3 ± 10.2 years) were examined with a standard 3T MRI protocol. With customized software (with semiautomatic and automatic interface), the hypointense and hyperintense areas of the peripheral nerves corresponding to fascicular and nonfascicular tissue were examined on T1-weighted sequences. The ratio of fascicular pixels to total pixels was called FR. Correlation with FR calculated on high-resolution ultrasound was performed. The statistical analysis included the Mann-Whitney U test of controls versus patients, the receiver operating characteristic (ROC) analysis, and the subgroup analysis of patients according to etiologies of neuropathy. Intraobserver and interobserver agreement was calculated based on the evaluation made by 3 readers. Finally, a complete automatic evaluation was performed. On MRI, FRs were significantly increased in patients compared with controls (FR, 76.7 ± 15.1 vs 56 ± 12.3; P < 0.0001 for the semiautomatic interface; and FR 66.3 ± 17.5 vs 47.8 ± 18.4; P < 0.0001 for the automatic interface). The increase in FR was caused mainly by an increase in the hypointense part of the nerve. This observation was valid for all causes of neuropathies. ROC analysis found an area under the curve of 0.75 (95% confidence interval, 0.44-0.81) for FR to discriminate neuropathy from control. The correlation coefficient between MRI and ultrasound was significant (r = 0.49; 95% confidence interval for r, 0.21-0.70; P = 0.012). With the semiautomated evaluation, the mean intraobserver agreement was good (K = 0.86). The interobserver agreements were also good (reader 1 vs reader 2, k = 0.71; reader 2 vs reader 3, k = 0.78; reader 3 vs reader 1, k = 0.71). There were no statistically significant differences between the results obtained using the 2 methods. FR calculation on MRI is feasible, and it may be used in adjunct to standard MRI evaluation in peripheral nerve disorders.
Collapse
Affiliation(s)
- Alberto S Tagliafico
- Institute of Anatomy, Department of Experimental Medicine (DIMES), University of Genoa (AST); and CNR-IMATI, Consiglio Nazionale delle Ricerche, Istituto di Matematica Applicata e Tecnologie Informatiche, Genova, Italy (GT)
| | | |
Collapse
|
35
|
Martínez Gómez I, Casals el Busto M, Antón Guirao J, Ruiz Perales F, Llobet Azpitarte R. Semiautomatic estimation of breast density with DM-Scan software. RADIOLOGIA 2014. [DOI: 10.1016/j.rxeng.2012.11.003] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
|
36
|
Tan M, Pu J, Zheng B. Reduction of false-positive recalls using a computerized mammographic image feature analysis scheme. Phys Med Biol 2014; 59:4357-73. [PMID: 25029964 DOI: 10.1088/0031-9155/59/15/4357] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Abstract
The high false-positive recall rate is one of the major dilemmas that significantly reduce the efficacy of screening mammography, which harms a large fraction of women and increases healthcare cost. This study aims to investigate the feasibility of helping reduce false-positive recalls by developing a new computer-aided diagnosis (CAD) scheme based on the analysis of global mammographic texture and density features computed from four-view images. Our database includes full-field digital mammography (FFDM) images acquired from 1052 recalled women (669 positive for cancer and 383 benign). Each case has four images: two craniocaudal (CC) and two mediolateral oblique (MLO) views. Our CAD scheme first computed global texture features related to the mammographic density distribution on the segmented breast regions of four images. Second, the computed features were given to two artificial neural network (ANN) classifiers that were separately trained and tested in a ten-fold cross-validation scheme on CC and MLO view images, respectively. Finally, two ANN classification scores were combined using a new adaptive scoring fusion method that automatically determined the optimal weights to assign to both views. CAD performance was tested using the area under a receiver operating characteristic curve (AUC). The AUC = 0.793 ± 0.026 was obtained for this four-view CAD scheme, which was significantly higher at the 5% significance level than the AUCs achieved when using only CC (p = 0.025) or MLO (p = 0.0004) view images, respectively. This study demonstrates that a quantitative assessment of global mammographic image texture and density features could provide useful and/or supplementary information to classify between malignant and benign cases among the recalled cases, which may eventually help reduce the false-positive recall rate in screening mammography.
Collapse
Affiliation(s)
- Maxine Tan
- School of Electrical and Computer Engineering, University of Oklahoma, Norman, OK 73019
| | | | | |
Collapse
|
37
|
Lam AR, Ding H, Molloi S. Quantification of breast density using dual-energy mammography with liquid phantom calibration. Phys Med Biol 2014; 59:3985-4000. [DOI: 10.1088/0031-9155/59/14/3985] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
|
38
|
Malkov S, Kerlikowske K, Shepherd J. Automated Volumetric Breast Density derived by Shape and Appearance Modeling. PROCEEDINGS OF SPIE--THE INTERNATIONAL SOCIETY FOR OPTICAL ENGINEERING 2014; 9034:90342T. [PMID: 25083119 PMCID: PMC4112966 DOI: 10.1117/12.2043990] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
The image shape and texture (appearance) estimation designed for facial recognition is a novel and promising approach for application in breast imaging. The purpose of this study was to apply a shape and appearance model to automatically estimate percent breast fibroglandular volume (%FGV) using digital mammograms. We built a shape and appearance model using 2000 full-field digital mammograms from the San Francisco Mammography Registry with known %FGV measured by single energy absorptiometry method. An affine transformation was used to remove rotation, translation and scale. Principal Component Analysis (PCA) was applied to extract significant and uncorrelated components of %FGV. To build an appearance model, we transformed the breast images into the mean texture image by piecewise linear image transformation. Using PCA the image pixels grey-scale values were converted into a reduced set of the shape and texture features. The stepwise regression with forward selection and backward elimination was used to estimate the outcome %FGV with shape and appearance features and other system parameters. The shape and appearance scores were found to correlate moderately to breast %FGV, dense tissue volume and actual breast volume, body mass index (BMI) and age. The highest Pearson correlation coefficient was equal 0.77 for the first shape PCA component and actual breast volume. The stepwise regression method with ten-fold cross-validation to predict %FGV from shape and appearance variables and other system outcome parameters generated a model with a correlation of r2 = 0.8. In conclusion, a shape and appearance model demonstrated excellent feasibility to extract variables useful for automatic %FGV estimation. Further exploring and testing of this approach is warranted.
Collapse
Affiliation(s)
- Serghei Malkov
- Dept. of Radiology & Biomedical Imaging, Univ. of California at San Francisco, 1 Irving Street, San Francisco, CA, USA 94122
| | - Karla Kerlikowske
- Depts. of Medicine and Epidemiology and Biostatistics, Univ. of California at San Francisco, 4150 Clement St., San Francisco, CA, United States, 94121
| | - John Shepherd
- Dept. of Radiology & Biomedical Imaging, Univ. of California at San Francisco, 1 Irving Street, San Francisco, CA, USA 94122
| |
Collapse
|
39
|
Vállez N, Bueno G, Déniz O, Dorado J, Seoane JA, Pazos A, Pastor C. Breast density classification to reduce false positives in CADe systems. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 2014; 113:569-584. [PMID: 24286729 DOI: 10.1016/j.cmpb.2013.10.004] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/30/2012] [Revised: 10/03/2013] [Accepted: 10/05/2013] [Indexed: 06/02/2023]
Abstract
This paper describes a novel weighted voting tree classification scheme for breast density classification. Breast parenchymal density is an important risk factor in breast cancer. Moreover, it is known that mammogram interpretation is more difficult when dense tissue is involved. Therefore, automated breast density classification may aid in breast lesion detection and analysis. Several classification methods have been compared and a novel hierarchical classification procedure of combined classifiers with linear discriminant analysis (LDA) is proposed as the best solution to classify the mammograms into the four BIRADS tissue classes. The classification scheme is based on 298 texture features. Statistical analysis to test the normality and homoscedasticity of the data was carried out for feature selection. Thus, only features that are influenced by the tissue type were considered. The novel classification techniques have been incorporated into a CADe system to drive the detection algorithms and tested with 1459 images. The results obtained on the 322 screen-film mammograms (SFM) of the mini-MIAS dataset show that 99.75% of samples were correctly classified. On the 1137 full-field digital mammograms (FFDM) dataset results show 91.58% agreement. The results of the lesion detection algorithms were obtained from modules integrated within the CADe system developed by the authors and show that using breast tissue classification prior to lesion detection leads to an improvement of the detection results. The tools enhance the detectability of lesions and they are able to distinguish their local attenuation without local tissue density constraints.
Collapse
Affiliation(s)
- Noelia Vállez
- VISILAB, Engineering School, Universidad de Castilla-La Mancha, Spain.
| | - Gloria Bueno
- VISILAB, Engineering School, Universidad de Castilla-La Mancha, Spain.
| | - Oscar Déniz
- VISILAB, Engineering School, Universidad de Castilla-La Mancha, Spain.
| | - Julián Dorado
- RNASA-IMEDIR Group, Computer School, Universidade da Coruña, Spain
| | | | - Alejandro Pazos
- RNASA-IMEDIR Group, Computer School, Universidade da Coruña, Spain
| | - Carlos Pastor
- Department of Radiology, Hospital General Universitario de Ciudad Real, Spain
| |
Collapse
|
40
|
Anter AM, Abu ElSoud M, Hassanien AE. Automatic Mammographic Parenchyma Classification According to BIRADS Dictionary. ACTA ACUST UNITED AC 2014. [DOI: 10.4018/978-1-4666-6030-4.ch002] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/16/2023]
Abstract
Internal density of the breast is a parameter that clearly affects the performance of segmentation and classification algorithms to define abnormality regions. Recent studies have shown that their sensitivity is significantly decreased as the density of the breast is increased. In this chapter, enhancement and segmentation process is applied to increase the computation and focus on mammographic parenchyma. This parenchyma is analyzed to discriminate tissue density according to BIRADS using Local Binary Pattern (LBP), Gray Level Co-Occurrence Matrix (GLCM), Fractal Dimension (FD), and feature fusion technique is applied to maximize and enhance the performance of the classifier rate. The different methods for computing tissue density parameter are reviewed, and the authors also present and exhaustively evaluate algorithms using computer vision techniques. The experimental results based on confusion matrix and kappa coefficient show a higher accuracy is obtained by automatic agreement classification.
Collapse
Affiliation(s)
- Ahmed M. Anter
- Mansoura University, Egypt & Scientific Research Group in Egypt (SRGE), Egypt
| | - Mohamed Abu ElSoud
- Mansoura University, Egypt & Scientific Research Group in Egypt (SRGE), Egypt
| | | |
Collapse
|
41
|
Prediction of near-term breast cancer risk based on bilateral mammographic feature asymmetry. Acad Radiol 2013; 20:1542-50. [PMID: 24200481 DOI: 10.1016/j.acra.2013.08.020] [Citation(s) in RCA: 40] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/05/2013] [Revised: 08/28/2013] [Accepted: 08/29/2013] [Indexed: 11/23/2022]
Abstract
RATIONALE AND OBJECTIVES The objective of this study is to investigate the feasibility of predicting near-term risk of breast cancer development in women after a negative mammography screening examination. It is based on a statistical learning model that combines computerized image features related to bilateral mammographic tissue asymmetry and other clinical factors. MATERIALS AND METHODS A database of negative digital mammograms acquired from 994 women was retrospectively collected. In the next sequential screening examination (12 to 36 months later), 283 women were diagnosed positive for cancer, 349 were recalled for additional diagnostic workups and later proved to be benign, and 362 remain negative (not recalled). From an initial pool of 183 features, we applied a Sequential Forward Floating Selection feature selection method to search for effective features. Using 10 selected features, we developed and trained a support vector machine classification model to compute a cancer risk or probability score for each case. The area under the receiver operating characteristic curve and odds ratios (ORs) were used as the two performance assessment indices. RESULTS The area under the receiver operating characteristic curve = 0.725 ± 0.018 was obtained for positive and negative/benign case classification. The ORs showed an increasing risk trend with increasing model-generated risk scores (from 1.00 to 12.34, between positive and negative/benign case groups). Regression analysis of ORs also indicated a significant increase trend in slope (P = .006). CONCLUSIONS This study demonstrates that the risk scores computed by a new support vector machine model involving bilateral mammographic feature asymmetry have potential to assist the prediction of near-term risk of women for developing breast cancer.
Collapse
|
42
|
Henry NL, Chan HP, Dantzer J, Goswami CP, Li L, Skaar TC, Rae JM, Desta Z, Khouri N, Pinsky R, Oesterreich S, Zhou C, Hadjiiski L, Philips S, Robarge J, Nguyen AT, Storniolo AM, Flockhart DA, Hayes DF, Helvie MA, Stearns V. Aromatase inhibitor-induced modulation of breast density: clinical and genetic effects. Br J Cancer 2013; 109:2331-9. [PMID: 24084768 PMCID: PMC3817329 DOI: 10.1038/bjc.2013.587] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2013] [Revised: 09/01/2013] [Accepted: 09/04/2013] [Indexed: 11/08/2022] Open
Abstract
BACKGROUND Change in breast density may predict outcome of women receiving adjuvant hormone therapy for breast cancer. We performed a prospective clinical trial to evaluate the impact of inherited variants in genes involved in oestrogen metabolism and signalling on change in mammographic percent density (MPD) with aromatase inhibitor (AI) therapy. METHODS Postmenopausal women with breast cancer who were initiating adjuvant AI therapy were enrolled onto a multicentre, randomised clinical trial of exemestane vs letrozole, designed to identify associations between AI-induced change in MPD and single-nucleotide polymorphisms in candidate genes. Subjects underwent unilateral craniocaudal mammography before and following 24 months of treatment. RESULTS Of the 503 enrolled subjects, 259 had both paired mammograms at baseline and following 24 months of treatment and evaluable DNA. We observed a statistically significant decrease in mean MPD from 17.1 to 15.1% (P<0.001), more pronounced in women with baseline MPD ≥20%. No AI-specific difference in change in MPD was identified. No significant associations between change in MPD and inherited genetic variants were observed. CONCLUSION Subjects with higher baseline MPD had a greater average decrease in MPD with AI therapy. There does not appear to be a substantial effect of inherited variants in biologically selected candidate genes.
Collapse
Affiliation(s)
- N L Henry
- Breast Oncology Program, University of Michigan Comprehensive Cancer Center, 1500 East Medical Center Drive, Med Inn Building C450, Ann Arbor, MI 48109-5843, USA
| | - H-P Chan
- Department of Radiology, University of Michigan Health Systems, Ann Arbor, MI 48109, USA
| | - J Dantzer
- Division of Clinical Pharmacology, Indiana University School of Medicine, Indianapolis, IN 46202, USA
| | - C P Goswami
- Division of Clinical Pharmacology, Indiana University School of Medicine, Indianapolis, IN 46202, USA
| | - L Li
- Division of Clinical Pharmacology, Indiana University School of Medicine, Indianapolis, IN 46202, USA
| | - T C Skaar
- Division of Clinical Pharmacology, Indiana University School of Medicine, Indianapolis, IN 46202, USA
| | - J M Rae
- Breast Oncology Program, University of Michigan Comprehensive Cancer Center, 1500 East Medical Center Drive, Med Inn Building C450, Ann Arbor, MI 48109-5843, USA
| | - Z Desta
- Division of Clinical Pharmacology, Indiana University School of Medicine, Indianapolis, IN 46202, USA
| | - N Khouri
- Department of Radiology, Johns Hopkins School of Medicine, Baltimore, MD 21231, USA
| | - R Pinsky
- Department of Radiology, University of Michigan Health Systems, Ann Arbor, MI 48109, USA
| | - S Oesterreich
- Womens Cancer Research Center, University of Pittsburgh Cancer Institute, Pittsburgh, PA 15213, USA
| | - C Zhou
- Department of Radiology, University of Michigan Health Systems, Ann Arbor, MI 48109, USA
| | - L Hadjiiski
- Department of Radiology, University of Michigan Health Systems, Ann Arbor, MI 48109, USA
| | - S Philips
- Division of Clinical Pharmacology, Indiana University School of Medicine, Indianapolis, IN 46202, USA
| | - J Robarge
- Division of Clinical Pharmacology, Indiana University School of Medicine, Indianapolis, IN 46202, USA
| | - A T Nguyen
- Division of Clinical Pharmacology, Indiana University School of Medicine, Indianapolis, IN 46202, USA
| | - A M Storniolo
- Department of Medicine, Indiana University School of Medicine, Indianapolis, IN 46202, USA
| | - D A Flockhart
- Division of Clinical Pharmacology, Indiana University School of Medicine, Indianapolis, IN 46202, USA
| | - D F Hayes
- Breast Oncology Program, University of Michigan Comprehensive Cancer Center, 1500 East Medical Center Drive, Med Inn Building C450, Ann Arbor, MI 48109-5843, USA
| | - M A Helvie
- Department of Radiology, University of Michigan Health Systems, Ann Arbor, MI 48109, USA
| | - V Stearns
- Breast Cancer Program, Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University, Baltimore, MD 21231, USA
| |
Collapse
|
43
|
Kim WH, Moon WK, Kim SM, Yi A, Chang JM, Koo HR, Lee SH, Cho N. Variability of breast density assessment in short-term reimaging with digital mammography. Eur J Radiol 2013; 82:1724-30. [DOI: 10.1016/j.ejrad.2013.05.004] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2013] [Revised: 04/22/2013] [Accepted: 05/05/2013] [Indexed: 10/26/2022]
|
44
|
Feng SSJ, Patel B, Sechopoulos I. Objective models of compressed breast shapes undergoing mammography. Med Phys 2013; 40:031902. [PMID: 23464317 DOI: 10.1118/1.4789579] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023] Open
Abstract
PURPOSE To develop models of compressed breasts undergoing mammography based on objective analysis, that are capable of accurately representing breast shapes in acquired clinical images and generating new, clinically realistic shapes. METHODS An automated edge detection algorithm was used to catalogue the breast shapes of clinically acquired cranio-caudal (CC) and medio-lateral oblique (MLO) view mammograms from a large database of digital mammography images. Principal component analysis (PCA) was performed on these shapes to reduce the information contained within the shapes to a small number of linearly independent variables. The breast shape models, one of each view, were developed from the identified principal components, and their ability to reproduce the shape of breasts from an independent set of mammograms not used in the PCA, was assessed both visually and quantitatively by calculating the average distance error (ADE). RESULTS The PCA breast shape models of the CC and MLO mammographic views based on six principal components, in which 99.2% and 98.0%, respectively, of the total variance of the dataset is contained, were found to be able to reproduce breast shapes with strong fidelity (CC view mean ADE = 0.90 mm, MLO view mean ADE = 1.43 mm) and to generate new clinically realistic shapes. The PCA models based on fewer principal components were also successful, but to a lesser degree, as the two-component model exhibited a mean ADE = 2.99 mm for the CC view, and a mean ADE = 4.63 mm for the MLO view. The four-component models exhibited a mean ADE = 1.47 mm for the CC view and a mean ADE = 2.14 mm for the MLO view. Paired t-tests of the ADE values of each image between models showed that these differences were statistically significant (max p-value = 0.0247). Visual examination of modeled breast shapes confirmed these results. Histograms of the PCA parameters associated with the six principal components were fitted with Gaussian distributions. The six-component model was also used to generate CC and MLO view mammogram breast shapes, using the mean PCA parameter values of these distributions and randomly generated values based on the fitted Gaussian distributions, which resemble clinically encountered breasts. A spreadsheet with the data necessary to apply this model is provided as the supplementary material. CONCLUSIONS Our PCA models of breast shapes in both mammographic views successfully reproduce analyzed breast shapes and generate new clinically relevant shapes. This work can aid in research applications which incorporate breast shape modeling, such as x-ray scatter correction, dosimetry, and image registration.
Collapse
Affiliation(s)
- Steve Si Jia Feng
- Department of Biomedical Engineering, Georgia Institute of Technology and Emory University, Atlanta, Georgia 30322, USA
| | | | | |
Collapse
|
45
|
Computer aided detection of breast density and mass, and visualization of other breast anatomical regions on mammograms using graph cuts. COMPUTATIONAL AND MATHEMATICAL METHODS IN MEDICINE 2013; 2013:205384. [PMID: 24106523 PMCID: PMC3782823 DOI: 10.1155/2013/205384] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/29/2013] [Revised: 07/29/2013] [Accepted: 08/03/2013] [Indexed: 11/22/2022]
Abstract
Breast cancer mostly arises from the glandular (dense) region of the breast. Consequently, breast density has been found to be a strong indicator for breast cancer risk. Therefore, there is a need to develop a system which can segment or classify dense breast areas. In a dense breast, the sensitivity of mammography for the early detection of breast cancer is reduced. It is difficult to detect a mass in a breast that is dense. Therefore, a computerized method to separate the existence of a mass from the glandular tissues becomes an important task. Moreover, if the segmentation results provide more precise demarcation enabling the visualization of the breast anatomical regions, it could also assist in the detection of architectural distortion or asymmetry. This study attempts to segment the dense areas of the breast and the existence of a mass and to visualize other breast regions (skin-air interface, uncompressed fat, compressed fat, and glandular) in a system. The graph cuts (GC) segmentation technique is proposed. Multiselection of seed labels has been chosen to provide the hard constraint for segmentation of the different parts. The results are promising. A strong correlation (r = 0.93) was observed between the segmented dense breast areas detected and radiological ground truth.
Collapse
|
46
|
O'Sullivan TD, Leproux A, Chen JH, Bahri S, Matlock A, Roblyer D, McLaren CE, Chen WP, Cerussi AE, Su MY, Tromberg BJ. Optical imaging correlates with magnetic resonance imaging breast density and reveals composition changes during neoadjuvant chemotherapy. Breast Cancer Res 2013; 15:R14. [PMID: 23433249 PMCID: PMC3672664 DOI: 10.1186/bcr3389] [Citation(s) in RCA: 54] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2012] [Accepted: 02/22/2013] [Indexed: 12/17/2022] Open
Abstract
Introduction In addition to being a risk factor for breast cancer, breast density has been
hypothesized to be a surrogate biomarker for predicting response to
endocrine-based chemotherapies. The purpose of this study was to evaluate whether
a noninvasive bedside scanner based on diffuse optical spectroscopic imaging
(DOSI) provides quantitative metrics to measure and track changes in breast tissue
composition and density. To access a broad range of densities in a limited patient
population, we performed optical measurements on the contralateral normal breast
of patients before and during neoadjuvant chemotherapy (NAC). In this work, DOSI
parameters, including tissue hemoglobin, water, and lipid concentrations, were
obtained and correlated with magnetic resonance imaging (MRI)-measured
fibroglandular tissue density. We evaluated how DOSI could be used to assess
breast density while gaining new insight into the impact of chemotherapy on breast
tissue. Methods This was a retrospective study of 28 volunteers undergoing NAC treatment for
breast cancer. Both 3.0-T MRI and broadband DOSI (650 to 1,000 nm) were obtained
from the contralateral normal breast before and during NAC. Longitudinal DOSI
measurements were used to calculate breast tissue concentrations of oxygenated and
deoxygenated hemoglobin, water, and lipid. These values were compared with
MRI-measured fibroglandular density before and during therapy. Results Water (r = 0.843; P < 0.001), deoxyhemoglobin (r =
0.785; P = 0.003), and lipid (r = -0.707; P = 0.010)
concentration measured with DOSI correlated strongly with MRI-measured density
before therapy. Mean DOSI parameters differed significantly between pre- and
postmenopausal subjects at baseline (water, P < 0.001;
deoxyhemoglobin, P = 0.024; lipid, P = 0.006). During NAC
treatment measured at about 90 days, significant reductions were observed in
oxyhemoglobin for pre- (-20.0%; 95% confidence interval (CI), -32.7 to -7.4) and
postmenopausal subjects (-20.1%; 95% CI, -31.4 to -8.8), and water concentration
for premenopausal subjects (-11.9%; 95% CI, -17.1 to -6.7) compared with baseline.
Lipid increased slightly in premenopausal subjects (3.8%; 95% CI, 1.1 to 6.5), and
water increased slightly in postmenopausal subjects (4.4%; 95% CI, 0.1 to 8.6).
Percentage change in water at the end of therapy compared with baseline correlated
strongly with percentage change in MRI-measured density (r = 0.864; P
= 0.012). Conclusions DOSI functional measurements correlate with MRI fibroglandular density, both
before therapy and during NAC. Although from a limited patient dataset, these
results suggest that DOSI may provide new functional indices of density based on
hemoglobin and water that could be used at the bedside to assess response to
therapy and evaluate disease risk.
Collapse
|
47
|
Automated volumetric breast density estimation: a comparison with visual assessment. Clin Radiol 2013; 68:690-5. [PMID: 23434202 DOI: 10.1016/j.crad.2013.01.011] [Citation(s) in RCA: 44] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2012] [Revised: 12/24/2012] [Accepted: 01/14/2013] [Indexed: 11/22/2022]
Abstract
AIM To compare automated volumetric breast density (VBD) measurement with visual assessment according to Breast Imaging Reporting and Data System (BI-RADS), and to determine the factors influencing the agreement between them. MATERIALS AND METHODS One hundred and ninety-three consecutive screening mammograms reported as negative were included in the study. Three radiologists assigned qualitative BI-RADS density categories to the mammograms. An automated volumetric breast-density method was used to measure VBD (% breast density) and density grade (VDG). Each case was classified into an agreement or disagreement group according to the comparison between visual assessment and VDG. The correlation between visual assessment and VDG was obtained. Various physical factors were compared between the two groups. RESULTS Agreement between visual assessment by the radiologists and VDG was good (ICC value = 0.757). VBD showed a highly significant positive correlation with visual assessment (Spearman's ρ = 0.754, p < 0.001). VBD and the x-ray tube target was significantly different between the agreement group and the disagreement groups (p = 0.02 and 0.04, respectively). CONCLUSION Automated VBD is a reliable objective method to measure breast density. The agreement between VDG and visual assessment by radiologist might be influenced by physical factors.
Collapse
|
48
|
Azevedo-Marques PMD, Rangayyan RM. Content-based Retrieval of Medical Images: Landmarking, Indexing, and Relevance Feedback. ACTA ACUST UNITED AC 2013. [DOI: 10.2200/s00469ed1v01y201301bme048] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
|
49
|
Wang X, Li L, Xu W, Liu W, Lederman D, Zheng B. Improving performance of computer-aided detection of masses by incorporating bilateral mammographic density asymmetry: an assessment. Acad Radiol 2012; 19:303-10. [PMID: 22173323 DOI: 10.1016/j.acra.2011.10.026] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2011] [Revised: 10/17/2011] [Accepted: 10/18/2011] [Indexed: 11/15/2022]
Abstract
RATIONALE AND OBJECTIVES Bilateral mammographic density asymmetry is a promising indicator in assessing risk of having or developing breast cancer. This study aims to assess the performance improvement of a computer-aided detection (CAD) scheme in detecting masses by incorporating bilateral mammographic density asymmetrical information. MATERIALS AND METHODS A testing dataset containing 2400 full-field digital mammograms (FFDM) acquired from 600 examination cases was established. Among them, 300 were positive cases with verified cancer associated with malignant masses and 300 were negative cases. Two computerized schemes were applied to process images of each case. The first single-image based CAD scheme detected suspicious mass regions and the second scheme computed average and difference of mammographic tissue density depicted between the left and right breast. A fusion method based on rotation of the CAD scoring projection reference axis was then applied to combine CAD-generated mass detection scores and either the computed average or difference (asymmetry) of bilateral mammographic density scores. The CAD performance levels with and without incorporating mammographic density information were evaluated and compared using a free-response receiver operating characteristic type data analysis method. RESULTS CAD achieved a case-based mass detection sensitivity of 0.74 and a region-based sensitivity of 0.56 at a false-positive rate of 0.25 per image. By fusing the CAD and bilateral mammographic density asymmetry scores, the case-based and region-based sensitivity levels of the CAD scheme were increased to 0.84 and 0.69, respectively, at the same false-positive rate. Fusion with average mammographic density only slightly increased CAD sensitivity to 0.75 (case-based) and 0.57 (region-based). CONCLUSIONS This study indicated that 1) bilateral mammographic density asymmetry was a stronger indicator of the case depicting suspicious masses than the average density computed from two breasts and 2) fusion between the conventional CAD scores and bilateral mammographic density asymmetry information could substantially increase CAD performance in mass detection.
Collapse
Affiliation(s)
- Xingwei Wang
- Department of Radiology, University of Pittsburgh, PA 15213, USA
| | | | | | | | | | | |
Collapse
|
50
|
Ciatto S, Bernardi D, Calabrese M, Durando M, Gentilini MA, Mariscotti G, Monetti F, Moriconi E, Pesce B, Roselli A, Stevanin C, Tapparelli M, Houssami N. A first evaluation of breast radiological density assessment by QUANTRA software as compared to visual classification. Breast 2012; 21:503-6. [PMID: 22285387 DOI: 10.1016/j.breast.2012.01.005] [Citation(s) in RCA: 100] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2011] [Revised: 12/22/2011] [Accepted: 01/11/2012] [Indexed: 12/01/2022] Open
Abstract
Breast radiological density is a determinant of breast cancer risk and of mammography sensitivity and may be used to personalize screening approach. We first analyzed the reproducibility of visual density assessment by eleven experienced radiologists classifying a set of 418 digital mammograms: reproducibility was satisfactory on a four (BI-RADS D1-2-3-4: weighted kappa = 0.694-0.844) and on a two grade (D1-2 vs D3-4: kappa = 0.620-0.851), but subjects classified as with dense breast would range between 25.1 and 50.5% depending on the classifying reader. Breast density was then assessed by computer using the QUANTRA software which provided systematically lower density percentage values as compared to visual classification. In order to predict visual classification results in discriminating dense and non-dense breast subjects on a two grade scale (D3-4 vs, D1-2) the best fitting cut off value observed for QUANTRA was ≤22.0%, which correctly predicted 88.6% of D1-2, 89.8% of D3-4, and 89.0% of total cases. Computer assessed breast density is absolutely reproducible, and thus to be preferred to visual classification. Thus far few studies have addressed the issue of adjusting computer assessed density to reproduce visual classification, and more similar comparative studies are needed.
Collapse
Affiliation(s)
- Stefano Ciatto
- UO Senologia Clinica e Screening Mammografico, Dipartimento di Radiodiagnostica, APSS, Trento, Italy.
| | | | | | | | | | | | | | | | | | | | | | | | | |
Collapse
|