1
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Tian DS, Zhang X, Cox RJ. Comparing total chemical synthesis and total biosynthesis routes to fungal specialized metabolites. Nat Prod Rep 2025; 42:720-738. [PMID: 39145774 DOI: 10.1039/d4np00015c] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/16/2024]
Abstract
Covering the period 1965-2024Total synthesis has been defined as the art and science of making the molecules of living Nature in the laboratory, and by extension, their analogues. At the extremes, specialised metabolites can be created by total chemical synthesis or by total biosynthesis. In this review we explore the advantages and disadvantages of these two approaches using quantitative methodology that combines measures of molecular complexity, molecular weight and fraction of sp3 centres for bioactive fungal metabolites. Total biosynthesis usually involves fewer chemical steps and those steps move more directly to the target than comparable total chemical synthesis. However, total biosynthesis currently lacks the flexibility of chemical synthesis and the ability to easily diversify synthetic routes.
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Affiliation(s)
- Dong-Song Tian
- College of Pharmaceutical Sciences, Southwest University, 400715 Chongqing, China.
| | - Xiao Zhang
- College of Pharmaceutical Sciences, Southwest University, 400715 Chongqing, China.
| | - Russell J Cox
- Institute for Organic Chemistry, Leibniz University of Hannover, Schneiderberg 38, 30167 Hannover, Germany.
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2
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Smith J, LeBlanc AR, Wuest WM. From Natural Products to Small Molecules: Recent Advancements in Anti-MRSA Therapeutics. ACS Med Chem Lett 2025; 16:542-551. [PMID: 40236547 PMCID: PMC11995227 DOI: 10.1021/acsmedchemlett.5c00061] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2025] [Revised: 02/27/2025] [Accepted: 03/05/2025] [Indexed: 04/17/2025] Open
Abstract
The urgent need for unique small molecules to treat increasing resistance in gram-positive pathogens, particularly methicillin-resistant Staphylococcus aureus, has motivated several creative research endeavors over the past decade. Recent advances have been inspired by natural products such as pleuromutilin, discovered in high-throughput screens, or repurposed approved drugs like sorafenib. This microperspective spotlights bioactive compounds, ranging from natural products to small molecule scaffolds, that have been reported in recent literature, highlighting their mechanisms of action, structure-activity relationships, and future potential.
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Affiliation(s)
- Jacqueline
R. Smith
- Department of Chemistry, Emory University, Atlanta, Georgia 30322, United States
| | - Andrew R. LeBlanc
- Department of Chemistry, Emory University, Atlanta, Georgia 30322, United States
| | - William M. Wuest
- Department of Chemistry, Emory University, Atlanta, Georgia 30322, United States
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3
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Li T, Jiang S, Dai Y, Wu X, Guo H, Shi L, Sang X, Ren L, Wang J, Shi L, Zhou W, Li H, Hao HD. Total synthesis and target identification of marine cyclopiane diterpenes. Nat Commun 2024; 15:10851. [PMID: 39738095 PMCID: PMC11686375 DOI: 10.1038/s41467-024-55189-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/10/2023] [Accepted: 12/04/2024] [Indexed: 01/01/2025] Open
Abstract
Marine cyclopianes are a family of diterpenoid with novel carbon skeleton and diverse biological activities. Herein, we report our synthetic and chemical proteomics studies of cyclopiane diterpenes which culminate in the asymmetric total synthesis of conidiogenones C, K and 12β-hydroxy conidiogenone C, and identification of Immunity-related GTPase family M protein 1 (IRGM1) as a cellular target. Our asymmetric synthesis commences from Wieland-Miescher ketone and features a sequential intramolecular Pauson-Khand reaction and gold-catalyzed Nazarov cyclization to rapidly construct the 6-5-5-5 tetracyclic skeleton. The stereocontrolled cyclopentenone construction is further investigated on complex settings to demonstrate its synthetic utility. Furthermore, using an alkyne-tagged conidiogenone C-derived probe, IRGM1, a master regulator of type I interferon responses, is identified as a key cellular target of conidiogenone C responsible for its anti-inflammatory activity. Preliminary mechanism of action studies shows that conidiogenone C activates IRGM1-mediate dysfunctional mitochondria autophagy to maintain mitochondria quality control of inflammatory macrophages.
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Affiliation(s)
- Tian Li
- Shaanxi Key Laboratory of Natural Products & Chemical Biology, College of Chemistry & Pharmacy, Northwest A&F University, Yangling, Shaanxi, 712100, China
| | - Shan Jiang
- State Key Laboratory of Natural and Biomimetic Drugs, Chemical Biology Center, School of Pharmaceutical Sciences, Peking University, Xue Yuan Road No. 38, Beijing, 100191, China
| | - Yuanhao Dai
- Shaanxi Key Laboratory of Natural Products & Chemical Biology, College of Chemistry & Pharmacy, Northwest A&F University, Yangling, Shaanxi, 712100, China
| | - Xia Wu
- State Key Laboratory of Natural and Biomimetic Drugs, Chemical Biology Center, School of Pharmaceutical Sciences, Peking University, Xue Yuan Road No. 38, Beijing, 100191, China
| | - Huihui Guo
- Shaanxi Key Laboratory of Natural Products & Chemical Biology, College of Chemistry & Pharmacy, Northwest A&F University, Yangling, Shaanxi, 712100, China
| | - Liang Shi
- Shaanxi Key Laboratory of Natural Products & Chemical Biology, College of Chemistry & Pharmacy, Northwest A&F University, Yangling, Shaanxi, 712100, China
| | - Xueli Sang
- Shaanxi Key Laboratory of Natural Products & Chemical Biology, College of Chemistry & Pharmacy, Northwest A&F University, Yangling, Shaanxi, 712100, China
| | - Li Ren
- Shaanxi Key Laboratory of Natural Products & Chemical Biology, College of Chemistry & Pharmacy, Northwest A&F University, Yangling, Shaanxi, 712100, China
| | - Jie Wang
- State Key Laboratory of Natural and Biomimetic Drugs, Chemical Biology Center, School of Pharmaceutical Sciences, Peking University, Xue Yuan Road No. 38, Beijing, 100191, China
| | - Lili Shi
- State Key Laboratory of Chemical Oncogenomics, Peking University Shenzhen Graduate School, Shenzhen, 518055, China
| | - Wenming Zhou
- Shaanxi Key Laboratory of Natural Products & Chemical Biology, College of Chemistry & Pharmacy, Northwest A&F University, Yangling, Shaanxi, 712100, China.
| | - Houhua Li
- State Key Laboratory of Natural and Biomimetic Drugs, Chemical Biology Center, School of Pharmaceutical Sciences, Peking University, Xue Yuan Road No. 38, Beijing, 100191, China.
| | - Hong-Dong Hao
- Shaanxi Key Laboratory of Natural Products & Chemical Biology, College of Chemistry & Pharmacy, Northwest A&F University, Yangling, Shaanxi, 712100, China.
- State Key Laboratory of Chemical Oncogenomics, Peking University Shenzhen Graduate School, Shenzhen, 518055, China.
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4
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Chen L, Lv C, Meng Y, Yang Z, Xin W, Zhu Y, Wang X, Wang B, Ding X, Wang Z, Wei X, Zhang X, Fu X, Meng X, Zhang M, Huo M, Li Y, Yu H, Wei Y, Geng L. The Latest Progress in the Chemistry of Daphniphyllum Alkaloids. Molecules 2024; 29:5498. [PMID: 39683658 DOI: 10.3390/molecules29235498] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/14/2024] [Revised: 11/04/2024] [Accepted: 11/11/2024] [Indexed: 12/18/2024] Open
Abstract
Daphniphyllum alkaloids (DAs) are interesting molecules with rich molecular skeletons and diverse biological activities. Since their discovery, phytochemists have isolated, purified, and identified more than 350 DAs. Synthetic chemists, attracted by the structure and activity of DAs, have accomplished many elegant synthetic jobs. Herein, we summarize work on the isolation, structural identification, bioactivity testing, and synthesis of DAs from 2018 to 2023, with the aim of providing a reference for future studies.
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Affiliation(s)
- Lujuan Chen
- Belgorod Institute of Food Sciences, Dezhou University, Dezhou 253023, China
| | - Chao Lv
- Shandong Provincial Engineering Research Center of Organic Functional Materials and Green Low-Carbon Technology, School of Chemistry and Chemical Engineering, Dezhou University, Dezhou 253023, China
| | - Yinping Meng
- Shandong Provincial Engineering Research Center of Organic Functional Materials and Green Low-Carbon Technology, School of Chemistry and Chemical Engineering, Dezhou University, Dezhou 253023, China
| | - Zhen Yang
- Belgorod Institute of Food Sciences, Dezhou University, Dezhou 253023, China
| | - Wenbin Xin
- Shandong Provincial Engineering Research Center of Organic Functional Materials and Green Low-Carbon Technology, School of Chemistry and Chemical Engineering, Dezhou University, Dezhou 253023, China
| | - Yuxue Zhu
- Shandong Provincial Engineering Research Center of Organic Functional Materials and Green Low-Carbon Technology, School of Chemistry and Chemical Engineering, Dezhou University, Dezhou 253023, China
| | - Xuehan Wang
- Shandong Provincial Engineering Research Center of Organic Functional Materials and Green Low-Carbon Technology, School of Chemistry and Chemical Engineering, Dezhou University, Dezhou 253023, China
| | - Baozhen Wang
- Shandong Provincial Engineering Research Center of Organic Functional Materials and Green Low-Carbon Technology, School of Chemistry and Chemical Engineering, Dezhou University, Dezhou 253023, China
| | - Xuan Ding
- Shandong Provincial Engineering Research Center of Organic Functional Materials and Green Low-Carbon Technology, School of Chemistry and Chemical Engineering, Dezhou University, Dezhou 253023, China
| | - Zhaoxia Wang
- Shandong Provincial Engineering Research Center of Organic Functional Materials and Green Low-Carbon Technology, School of Chemistry and Chemical Engineering, Dezhou University, Dezhou 253023, China
| | - Xuyue Wei
- Shandong Provincial Engineering Research Center of Organic Functional Materials and Green Low-Carbon Technology, School of Chemistry and Chemical Engineering, Dezhou University, Dezhou 253023, China
| | - Xinyue Zhang
- Shandong Provincial Engineering Research Center of Organic Functional Materials and Green Low-Carbon Technology, School of Chemistry and Chemical Engineering, Dezhou University, Dezhou 253023, China
| | - Xuexue Fu
- Shandong Provincial Engineering Research Center of Organic Functional Materials and Green Low-Carbon Technology, School of Chemistry and Chemical Engineering, Dezhou University, Dezhou 253023, China
| | - Xiangru Meng
- Shandong Provincial Engineering Research Center of Organic Functional Materials and Green Low-Carbon Technology, School of Chemistry and Chemical Engineering, Dezhou University, Dezhou 253023, China
| | - Meimei Zhang
- Shandong Provincial Engineering Research Center of Organic Functional Materials and Green Low-Carbon Technology, School of Chemistry and Chemical Engineering, Dezhou University, Dezhou 253023, China
| | - Manyu Huo
- Shandong Provincial Engineering Research Center of Organic Functional Materials and Green Low-Carbon Technology, School of Chemistry and Chemical Engineering, Dezhou University, Dezhou 253023, China
| | - Ying Li
- School of Life Sciences, Dezhou University, Dezhou 253023, China
| | - Hui Yu
- Health and Medicine College, Dezhou University, Dezhou 253023, China
| | - Yuxia Wei
- School of Life Sciences, Dezhou University, Dezhou 253023, China
| | - Longlong Geng
- Shandong Provincial Engineering Research Center of Organic Functional Materials and Green Low-Carbon Technology, School of Chemistry and Chemical Engineering, Dezhou University, Dezhou 253023, China
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5
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Santalucia D, Bondanza M, Lipparini F, Ripszam M, Rossi N, Mandoli A. Breaking the Rules: On the Relative Stability of Some Methylencyclopropane and Methylcyclopropene Derivatives. Chemistry 2024; 30:e202400431. [PMID: 38483818 DOI: 10.1002/chem.202400431] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2024] [Indexed: 04/11/2024]
Abstract
The structure of the spirocyclic product obtained by reacting catechol with 1,1-dichloro-2-(chloromethyl)cyclopropane is shown by NMR and X-ray analysis to be that of a 2-methylcyclopropene (MeCP), instead of the previously reported 2-methylenecyclopropane (MCP) one. The study of the equilibration between the two isomeric forms by experimental and computational means (including both Density Functional Theory - DFT - and Coupled Cluster with single, double, and perturbative triple excitations - CCSD(T) - calculations) revealed that, at variance with most of the alkylidenecyclopropane/alkylcyclopropene systems described to date, for the compounds of the present study the MeCP derivative is more stable by≈ 2.5-3.0 Kcal mol-1 than the MCP one. The extension of the DFT and CCSD(T) study to other spiro-MCP/MeCP pairs suggests that the origin of the unexpected shift of the equilibrium position can be tracked back to a combination of electronic and ring-strain effects. These findings lead to re-think a long-standing, and substantially undisputed belief in the area of unsaturated cyclopropane derivatives.
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Affiliation(s)
- Delio Santalucia
- Dipartimento di Chimica e Chimica Industriale, Università di Pisa, Via G. Moruzzi 13, 56126, Pisa, Italy
| | - Mattia Bondanza
- Dipartimento di Chimica e Chimica Industriale, Università di Pisa, Via G. Moruzzi 13, 56126, Pisa, Italy
| | - Filippo Lipparini
- Dipartimento di Chimica e Chimica Industriale, Università di Pisa, Via G. Moruzzi 13, 56126, Pisa, Italy
| | - Matyas Ripszam
- Dipartimento di Chimica e Chimica Industriale, Università di Pisa, Via G. Moruzzi 13, 56126, Pisa, Italy
| | - Nicolò Rossi
- Dipartimento di Chimica e Chimica Industriale, Università di Pisa, Via G. Moruzzi 13, 56126, Pisa, Italy
| | - Alessandro Mandoli
- Dipartimento di Chimica e Chimica Industriale, Università di Pisa, Via G. Moruzzi 13, 56126, Pisa, Italy
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6
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Geng S, Pu Y, Wang S, Ji Y, Feng Z. Advances in disilylation reactions to access cis/ trans-1,2-disilylated and gem-disilylated alkenes. Chem Commun (Camb) 2024; 60:3484-3506. [PMID: 38469709 DOI: 10.1039/d4cc00288a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/13/2024]
Abstract
Organosilane compounds are widely used in both organic synthesis and materials science. Particularly, 1,2-disilylated and gem-disilylated alkenes, characterized by a carbon-carbon double bond and multiple silyl groups, exhibit significant potential for subsequently diverse transformations. The versatility of these compounds renders them highly promising for applications in materials, enabling them to be valuable and versatile building blocks in organic synthesis. This review provides a comprehensive summary of methods for the preparation of cis/trans-1,2-disilylated and gem-disilylated alkenes. Despite notable advancements in this field, certain limitations persist, including challenges related to regioselectivity in the incorporation and chemoselectivity in the transformation of two nearly identical silyl groups. The primary objective of this review is to outline synthetic methodologies for the generation of these alkenes through disilylation reactions, employing silicon reagents, specifically disilanes, hydrosilanes, and silylborane reagents. The review places particular emphasis on investigating the practical applications of the C-Si bond of disilylalkenes and delves into an in-depth discussion of reaction mechanisms, particularly those reactions involving the activation of Si-Si, Si-H, and Si-B bonds, as well as the C-Si bond formation.
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Affiliation(s)
- Shasha Geng
- Chongqing Key Laboratory of Natural Product Synthesis and Drug Research, Chemical Biology Research Center, School of Pharmaceutical Sciences, Chongqing University, Chongqing 401331, P. R. China.
| | - Yu Pu
- Sichuan Key Laboratory of Medical Imaging, North Sichuan Medical College, Nanchong, Sichuan 637000, P. R. China
| | - Siyu Wang
- Chongqing Key Laboratory of Natural Product Synthesis and Drug Research, Chemical Biology Research Center, School of Pharmaceutical Sciences, Chongqing University, Chongqing 401331, P. R. China.
| | - Yanru Ji
- Sichuan Key Laboratory of Medical Imaging, North Sichuan Medical College, Nanchong, Sichuan 637000, P. R. China
| | - Zhang Feng
- Chongqing Key Laboratory of Natural Product Synthesis and Drug Research, Chemical Biology Research Center, School of Pharmaceutical Sciences, Chongqing University, Chongqing 401331, P. R. China.
- Sichuan Key Laboratory of Medical Imaging, North Sichuan Medical College, Nanchong, Sichuan 637000, P. R. China
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7
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Deng H, Deng H, Kim C, Li P, Wang X, Yu Y, Qin T. Synthesis of nimbolide and its analogues and their application as poly(ADP-ribose) polymerase-1 trapping inducers. NATURE SYNTHESIS 2024; 3:378-385. [PMID: 39119242 PMCID: PMC11309514 DOI: 10.1038/s44160-023-00437-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/27/2022] [Accepted: 10/11/2023] [Indexed: 08/10/2024]
Abstract
Nimbolide, a ring seco-C limonoid natural product, was recently found to inhibit the poly(ADP)-ribosylation (PARylation)-dependent ubiquitin E3 ligase RNF114. In doing so, it induces the 'supertrapping' of both PARylated PARP1 and PAR-dependent DNA-repair factors. PARP1 inhibitors have reshaped the treatment of cancer patients with germline BRCA1/2 mutations partly through the PARP1 trapping mechanism. To this end, modular access to nimbolide analogues represents an opportunity to develop cancer therapeutics with enhanced PARP1 trapping capability. Here we report a convergent synthesis of nimbolide through a late-stage coupling strategy. Through a sulfonyl hydrazone-mediated etherification and a radical cyclization, this strategy uses a pharmacophore-containing building block and diversifiable hydrazone units to enable the modular synthesis of nimbolide and its analogues. The broad generality of our synthetic strategy allowed access to a variety of analogues with their preliminary cellular cytotoxicity and PARP1 trapping activity reported.
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Affiliation(s)
- Heping Deng
- Department of Biochemistry, The University of Texas Southwestern Medical Center, Dallas, TX, USA
- These authors contributed equally: Heping Deng, Hejun Deng
| | - Hejun Deng
- Department of Biochemistry, The University of Texas Southwestern Medical Center, Dallas, TX, USA
- These authors contributed equally: Heping Deng, Hejun Deng
| | - Chiho Kim
- Department of Biochemistry, The University of Texas Southwestern Medical Center, Dallas, TX, USA
- Present address: Department of Molecular Pharmacology and Therapeutics, Columbia University Vagelos College of Physicians and Surgeons, New York, NY, USA
| | - Peng Li
- Department of Biochemistry, The University of Texas Southwestern Medical Center, Dallas, TX, USA
| | - Xudong Wang
- Department of Biochemistry, The University of Texas Southwestern Medical Center, Dallas, TX, USA
- Present address: Department of Molecular Pharmacology and Therapeutics, Columbia University Vagelos College of Physicians and Surgeons, New York, NY, USA
| | - Yonghao Yu
- Department of Biochemistry, The University of Texas Southwestern Medical Center, Dallas, TX, USA
- Present address: Department of Molecular Pharmacology and Therapeutics, Columbia University Vagelos College of Physicians and Surgeons, New York, NY, USA
| | - Tian Qin
- Department of Biochemistry, The University of Texas Southwestern Medical Center, Dallas, TX, USA
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8
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Li Y, Qu X, Wang Q, Li S, Zhang Q, Zhang X. Tannic acid and carboxymethyl chitosan-based multi-functional double-layered hydrogel with pH-stimulated response behavior for smart real-time infection monitoring and wound treatment. Int J Biol Macromol 2024; 261:129042. [PMID: 38161021 DOI: 10.1016/j.ijbiomac.2023.129042] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/06/2023] [Revised: 12/18/2023] [Accepted: 12/22/2023] [Indexed: 01/03/2024]
Abstract
The dramatic increase of drug-resistant pathogenic bacteria has seriously effect on human health, appealing the needs of developing theranostic platforms with stimuli-responsive materials to realize the accurate bacterial diagnostics and therapeutics. Herein, a tannic acid and carboxymethyl chitosan-based multifunctional ZIF-90@i-PPOPs-phenol red double-layered hydrogel with stimuli-responsiveness and antibacterial activity was fabricated. The inner layer hydrogel (ZIF-90@i-PPOPs-based TFC hydrogels) was fabricated based on ZIF-90@i-PPOPs, integrate tannic acid and carboxymethyl chitosan linked by formylphenylboronic acid (FPBA), which exhibited outstanding injectable, biodegradability and antibacterial activity. The outer layer hydrogel (PR@PAM hydrogels) were constructed from polyacrylamide (PAM) and pH indicator phenol red, owning porous structure and excellent tissue adhesion. Due to the weakly acidic microenvironment within wound, the inner-layer hydrogel was stimulus-responsively decomposed, resulting in the accurate delivery of the positively charged ZIF-90@i-PPOPs to the lesion site to capture and kill bacteria by enhanced Zn2+ and ROS release. Meantime, the outer-layer hydrogel could real-timely monitor the pH changes to evaluate the wound recovery status. These double-layered hydrogels possessed precisely pH monitoring capacity, excellent antibacterial ability and negligible side effect to normal tissue in vivo, implying the high potential of the suggested hydrogels as theranostic platform for antibacterial treatment.
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Affiliation(s)
- Yanhong Li
- School of Chemistry and Chemical Engineering, Shandong University, Jinan, Shandong 250100, China
| | - Xinyan Qu
- School of Pharmaceutical Sciences, Shandong Analysis and Test Center, Qilu University of Technology (Shandong Academy of Sciences), Jinan 250014, China.
| | - Quanbo Wang
- School of Pharmaceutical Sciences, Shandong Analysis and Test Center, Qilu University of Technology (Shandong Academy of Sciences), Jinan 250014, China
| | - Sheng Li
- Weifang Hospital of Traditional Chinese Medicine, Weifang 261000, China
| | - Qiang Zhang
- School of Chemistry and Chemical Engineering, Shandong University, Jinan, Shandong 250100, China
| | - Xiaomei Zhang
- School of Chemistry and Chemical Engineering, Shandong University, Jinan, Shandong 250100, China.
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9
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Li Y, Wang Q, Qu X, Tian J, Zhang X. Construction of palladium porphyrins and triptycene photo-activated nanomaterial for enhanced colorimetric detection and inactivation of bacteria. J Colloid Interface Sci 2023; 648:220-230. [PMID: 37301146 DOI: 10.1016/j.jcis.2023.05.190] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/27/2023] [Revised: 05/04/2023] [Accepted: 05/29/2023] [Indexed: 06/12/2023]
Abstract
In the face of increasing bacterial resistance, design of high-performing and dual-functional nanomaterials to satisfy the requirements for both detecting and eradicating bacteria is of immense importance, but still remains a great challenge. Herein, a hierarchically three-dimensional (3D) porous organic frameworks (PdPPOPHBTT) was rationally designed and fabricated for the first time to realize ideal simultaneous detection and eradication of bacteria. PdPPOPHBTT covalently integrated palladium 5,10,15,20-tetrakis-(4'-bromophenyl) porphyrin (PdTBrPP, an excellent photosensitizer) with 2,3,6,7,12,13-hexabromotriptycene (HBTT, a 3D building module). The resulting material had outstanding NIR absorption, narrow bad gap and robust singlet oxygen (1O2) production capacity, which is responsible for the sensitive detection and effective removal of bacteria. We successfully realized the colorimetric detection of S. aureus and the efficient removal of S. aureus and E. coli. The first-principles calculations found at the highly activated 1O2 derived from the 3D conjugated periodic structures and ample palladium adsorption site in PdPPOPHBTT. The bacterial infection wound model revealed that PdPPOPHBTT possesses good disinfection ability and negligible side effect to normal tissue in vivo. This finding provides an innovative strategy for designing individual porous organic polymer (POPs) with multi-function and also broaden the applications of POPs as powerful nonantibiotic type of antimicrobials.
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Affiliation(s)
- Yanhong Li
- School of Chemistry and Chemical Engineering, Shandong University, Jinan, Shandong 250100, China
| | - Quanbo Wang
- School of Pharmaceutical Sciences, Shandong Analysis and Test Center, Qilu University of Technology (Shandong Academy of Sciences), Jinan 250014, China.
| | - Xinyan Qu
- School of Pharmaceutical Sciences, Shandong Analysis and Test Center, Qilu University of Technology (Shandong Academy of Sciences), Jinan 250014, China
| | - Jing Tian
- Shandong Product Quality Inspection Research Institute, Jinan, Shandong 250100, China
| | - Xiaomei Zhang
- School of Chemistry and Chemical Engineering, Shandong University, Jinan, Shandong 250100, China.
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10
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Kisszékelyi P, Šebesta R. Enolates ambushed - asymmetric tandem conjugate addition and subsequent enolate trapping with conventional and less traditional electrophiles. Beilstein J Org Chem 2023; 19:593-634. [PMID: 37180457 PMCID: PMC10167861 DOI: 10.3762/bjoc.19.44] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/03/2023] [Accepted: 04/21/2023] [Indexed: 05/16/2023] Open
Abstract
Metal enolates are useful intermediates and building blocks indispensable in many organic synthetic transformations. Chiral metal enolates obtained by asymmetric conjugate additions of organometallic reagents are structurally complex intermediates that can be employed in many transformations. In this review, we describe this burgeoning field that is reaching maturity after more than 25 years of development. The effort of our group to broaden possibilities to engage metal enolates in reactions with new electrophiles is described. The material is divided according to the organometallic reagent employed in the conjugate addition step, and thus to the particular metal enolate formed. Short information on applications in total synthesis is also given.
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Affiliation(s)
- Péter Kisszékelyi
- Department of Organic Chemistry, Faculty of Natural Sciences, Comenius University Bratislava, Mlynská dolina, Ilkovičova 6, 842 15 Bratislava, Slovakia
| | - Radovan Šebesta
- Department of Organic Chemistry, Faculty of Natural Sciences, Comenius University Bratislava, Mlynská dolina, Ilkovičova 6, 842 15 Bratislava, Slovakia
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11
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Hsu IT, Herzon SB. Fragment Coupling Approach to Diaporthein B. J Org Chem 2023; 88:2221-2244. [PMID: 36737056 DOI: 10.1021/acs.joc.2c02655] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
Abstract
Pimarane diterpenes are produced by a diverse array of plants, fungi, and bacteria. Many members of this family possess antimicrobial and antiproliferative activities. The pimarane diterpenes are characterized by a tricyclic carbon scaffold comprising three fused six-membered rings and at least three quaternary centers. Here, we describe two convergent, fragment-based strategies toward the synthesis of diaporthein B (3), one of the most highly oxidized pimarane diterpenes. The first approach provided access to the tricyclic carbon scaffold of the target and featured a highly diastereoselective fragment coupling, a novel carbonylative Stille cross-coupling to directly access an α-hydroxyketone from a vinyl iodide, and a tandem aldol cyclization-deprotection cascade. The second route utilized a diastereoselective 1,4-addition of a silyloxyfuran to an unsaturated ketone, followed by an epoxidation-ring opening sequence, to access a highly oxidized intermediate containing two elaborated cyclohexane rings. The chemistry developed herein may ultimately be useful in an eventual synthesis of this class of natural products.
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Affiliation(s)
- Ian Tingyung Hsu
- Department of Chemistry, Yale University, New Haven, Connecticut06520, United States
| | - Seth B Herzon
- Department of Chemistry, Yale University, New Haven, Connecticut06520, United States.,Departments of Pharmacology and Therapeutic Radiology, Yale School of Medicine, New Haven, Connecticut06520, United States
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12
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Alleman C, Gadais C, Legentil L, Porée FH. Strategies to access the [5-8] bicyclic core encountered in the sesquiterpene, diterpene and sesterterpene series. Beilstein J Org Chem 2023; 19:245-281. [PMID: 36895430 PMCID: PMC9989678 DOI: 10.3762/bjoc.19.23] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2022] [Accepted: 02/13/2023] [Indexed: 03/06/2023] Open
Abstract
Terpene compounds probably represent the most diversified class of secondary metabolites. Some classes of terpenes, mainly diterpenes (C20) and sesterterpenes (C25) and to a lesser extent sesquiterpenes (C15), share a common bicyclo[3.6.0]undecane core which is characterized by the presence of a cyclooctane ring fused to a cyclopentane ring, i.e., a [5-8] bicyclic ring system. This review focuses on the different strategies elaborated to construct this [5-8] bicyclic ring system and their application in the total synthesis of terpenes over the last two decades. The overall approaches involve the construction of the 8-membered ring from an appropriate cyclopentane precursor. The proposed strategies include metathesis, Nozaki-Hiyama-Kishi (NHK) cyclization, Pd-mediated cyclization, radical cyclization, Pauson-Khand reaction, Lewis acid-promoted cyclization, rearrangement, cycloaddition and biocatalysis.
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Affiliation(s)
- Cécile Alleman
- Université Rennes, Faculté de Pharmacie, CNRS ISCR UMR 6226, F-35000 Rennes, France
| | - Charlène Gadais
- Université Rennes, Faculté de Pharmacie, CNRS ISCR UMR 6226, F-35000 Rennes, France
| | - Laurent Legentil
- Université Rennes, Ecole Nationale Supérieure de Chimie de Rennes, CNRS, ISCR - UMR 6226, F-35000 Rennes, France
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13
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Goethe O, DiBello M, Herzon SB. Total synthesis of structurally diverse pleuromutilin antibiotics. Nat Chem 2022; 14:1270-1277. [PMID: 36163267 PMCID: PMC9633427 DOI: 10.1038/s41557-022-01027-7] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/28/2022] [Accepted: 07/21/2022] [Indexed: 11/08/2022]
Abstract
The emergence of drug-resistant bacterial pathogens has placed renewed emphasis on the total chemical synthesis of novel antibacterials. Tetracyclines, macrolides, streptogramins and lincosamides are now accessible through flexible and general synthetic routes. Pleuromutilins (antibiotics based on the fungal metabolite pleuromutilin) have remained resistant to this approach, in large part due to the difficulties encountered in the de novo construction of the decahydro-3a,9-propanocyclopenta[8]annulene skeleton. Here we present a platform for the total synthesis of pleuromutilins that provides access to diverse derivatives bearing alterations at previously inaccessible skeletal and peripheral positions. The synthesis is enabled by the serendipitous discovery of a vinylogous Wolff rearrangement, which serves to establish the C9 quaternary centre in the targets, and the development of a highly diastereoselective butynylation of an α-quaternary aldehyde, which forms the C14 secondary alcohol. The versatility of the route is demonstrated through the synthesis of seventeen structurally distinct derivatives, with many possessing potent antibacterial activity.
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Affiliation(s)
- Olivia Goethe
- Department of Chemistry, Yale University, New Haven, CT, USA
| | - Mikaela DiBello
- Department of Chemistry, Yale University, New Haven, CT, USA
| | - Seth B Herzon
- Department of Chemistry, Yale University, New Haven, CT, USA.
- Department of Pharmacology, Yale School of Medicine, New Haven, CT, USA.
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14
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Chen H, Li Z, Shao P, Yuan H, Chen SC, Luo T. Total Synthesis of (+)-Mutilin: A Transannular [2+2] Cycloaddition/Fragmentation Approach. J Am Chem Soc 2022; 144:15462-15467. [DOI: 10.1021/jacs.2c06934] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Affiliation(s)
- Han Chen
- Key Laboratory of Bioorganic Chemistry and Molecular Engineering, Ministry of Education and Beijing National Laboratory for Molecular Science, College of Chemistry and Molecular Engineering, Peking University, Beijing 100871, China
| | - Zesheng Li
- Key Laboratory of Bioorganic Chemistry and Molecular Engineering, Ministry of Education and Beijing National Laboratory for Molecular Science, College of Chemistry and Molecular Engineering, Peking University, Beijing 100871, China
| | - Peng Shao
- Peking-Tsinghua Center for Life Sciences, Academy for Advanced Interdisciplinary Studies, Peking University, Beijing 100871, China
| | - Haosen Yuan
- Key Laboratory of Bioorganic Chemistry and Molecular Engineering, Ministry of Education and Beijing National Laboratory for Molecular Science, College of Chemistry and Molecular Engineering, Peking University, Beijing 100871, China
| | - Si-Cong Chen
- Key Laboratory of Bioorganic Chemistry and Molecular Engineering, Ministry of Education and Beijing National Laboratory for Molecular Science, College of Chemistry and Molecular Engineering, Peking University, Beijing 100871, China
| | - Tuoping Luo
- Key Laboratory of Bioorganic Chemistry and Molecular Engineering, Ministry of Education and Beijing National Laboratory for Molecular Science, College of Chemistry and Molecular Engineering, Peking University, Beijing 100871, China
- Peking-Tsinghua Center for Life Sciences, Academy for Advanced Interdisciplinary Studies, Peking University, Beijing 100871, China
- Institute of Molecular Physiology, Shenzhen Bay Laboratory, Shenzhen, Guangdong 518055, China
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15
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Abstract
Synthesis of a potent inhibitor of bacterial protein synthesis, pleuromutilin, is described. Assembly of the critical cyclooctane fragment relies on an oxidative ring-expansion, and complete stereochemical relay in the synthetic sequence is enabled by the judicious choice of tactics. The requisite connectivity pattern of the perhydroindanone motif is rapidly established in a sequence of cycloaddition and radical cyclization events. Application of this strategy allows for preparation of the target natural product in 16 steps from commercially available material.
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Affiliation(s)
- Nicholas J Foy
- Department of Chemistry, University of California, Irvine, California 92697-2025, United States
| | - Sergey V Pronin
- Department of Chemistry, University of California, Irvine, California 92697-2025, United States
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16
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Dooley CJ, Rychnovsky SD. Asymmetric Total Synthesis of (2 R)-Hydroxynorneomajucin, a Norsesquiterpene from Illicium jiadifengpi. Org Lett 2022; 24:3411-3415. [DOI: 10.1021/acs.orglett.2c01207] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Affiliation(s)
- Charles J. Dooley
- Department of Chemistry, University of California at Irvine, 1102 Natural Sciences II, Irvine, California 92697, United States
| | - Scott D. Rychnovsky
- Department of Chemistry, University of California at Irvine, 1102 Natural Sciences II, Irvine, California 92697, United States
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17
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Shen SJ, Wang LM, Gong GM, Wang YJ, Liang JY, Wang JW. Construction of sulfur-containing N-vinylimides: N-addition of imides to propargyl sulfonium salts. RSC Adv 2022; 12:12663-12671. [PMID: 35480347 PMCID: PMC9039989 DOI: 10.1039/d2ra01117d] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/19/2022] [Accepted: 04/08/2022] [Indexed: 11/25/2022] Open
Abstract
An N-addition reaction between imides and propargyl sulfonium salts was developed to afford sulfur-containing N-vinylimides with moderate to excellent yields. Under the activation of NaOAc·3H2O, imides could undergo deprotonation and propargyl sulfonium salts could isomerize to allenic sulfonium salts. The N-nucleophilic attack initiates the reaction and gives the desired products. Various imides, including arylimides, aliphatic imides and N-(arylsulfonyl) alkyl acylamides, and even bioactive saccharin, thalidomide and pomalidomide could provide organosulfur N-vinylimides compounds. The simple, mild and metal-free reaction conditions, the broad scope of substrates, gram-scale synthesis and convenient transformation embody the synthetic superiority of this process.
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Affiliation(s)
- Shou-Jie Shen
- Key Laboratory of Magnetic Molecules, Magnetic Information Materials Ministry of Education, The School of Chemical and Material Science, Shanxi Normal University Linfen 041004 China
| | - Le-Mei Wang
- Key Laboratory of Magnetic Molecules, Magnetic Information Materials Ministry of Education, The School of Chemical and Material Science, Shanxi Normal University Linfen 041004 China
| | - Guo-Mei Gong
- Key Laboratory of Magnetic Molecules, Magnetic Information Materials Ministry of Education, The School of Chemical and Material Science, Shanxi Normal University Linfen 041004 China
| | - Yan-Jiao Wang
- Key Laboratory of Magnetic Molecules, Magnetic Information Materials Ministry of Education, The School of Chemical and Material Science, Shanxi Normal University Linfen 041004 China
| | - Jin-Yan Liang
- College of Life Science, Shanxi Normal University Linfen 041004 China
| | - Jun-Wen Wang
- Key Laboratory of Magnetic Molecules, Magnetic Information Materials Ministry of Education, The School of Chemical and Material Science, Shanxi Normal University Linfen 041004 China
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18
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Leowattana W, Leowattana P, Leowattana T. Pleuromutilin and its Derivatives: Promising Novel Anti-Infective Agents. ANTI-INFECTIVE AGENTS 2022; 20. [DOI: 10.2174/2211352519666211130111723] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/09/2021] [Revised: 06/12/2021] [Accepted: 09/18/2021] [Indexed: 02/05/2023]
Abstract
:
Due to the emergence and spread of the drug resistance to numerous antibiotics, global
research attempts focus on new classes of antibiotics with different mechanisms of action from currently
used drugs. Pleuromutilin was first identified as a natural antibiotic in 1951 from the New
York Botanical Garden and Columbia University. The substance was isolated from Pleurotus mutilus
and Pleurotus passeckerianus. Nevertheless, pleuromutilin was first launched in 1979 (tiamulin)
for use in veterinarians. However, antibiotics with new targets or employing a different action
mechanism are always attractive because they conquered recognized resistance by the bacteria
and were not resisted against approved antibiotic classes. Pleuromutilin has a unique antibacterial
activity that binds to the peptidyl transferase at the central area of the bacteria's 50S ribosome to inhibit
protein synthesis. Pleuromutilin antibiotics have antimicrobial activity against Gram-positive
pathogens. Besides, they cover some fastidious Gram-negative bacteria. As Gram-positive bacteria
increased resistance against currently approved antibiotics, the pleuromutilin antibiotic was investigated
to develop a systemically antibacterial drug to be used in humans. In 2006, lefamulin was developed
and started to encounter studying for systemic infection in humans. Lefamulin is a semisynthetic
pleuromutilin antibiotic, and the US FDA approved it for community-acquired bacterial
pneumonia (CABP) treatment in August 2019. This review will focus on this antibiotic's critical issues,
the relevant bacterial spectrum activity, preclinical and clinical information, and potentially
therapeutic properties of pleuromutilin antibiotic.
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Affiliation(s)
- Wattana Leowattana
- Department of Clinical Tropical Medicine, Faculty of Tropical Medicine, Mahidol University, 420/6 Rajavithi road,
Rachatawee, Bangkok10400, Thailand
| | | | - Tawithep Leowattana
- Department of Medicine, Faculty of Medicine, Srinakharinwirot University, 114 Sukhumvit 23, Wattana District,
Bangkok10110, Thailand
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19
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Yang J, Qi Y, Blodgett JAV, Wencewicz TA. Multifunctional P450 Monooxygenase CftA Diversifies the Clifednamide Pool through Tandem C-H Bond Activations. JOURNAL OF NATURAL PRODUCTS 2022; 85:47-55. [PMID: 35086337 DOI: 10.1021/acs.jnatprod.1c00606] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
Polycyclic tetramate macrolactams (PTMs) are a class of structurally complex hybrid polyketide-nonribosomal peptide (PK-NRP) natural products produced by diverse bacteria. Several PTMs display pharmaceutically interesting bioactivities, and the early stages of PTM biosynthesis involving polyketide synthase (PKS) and nonribosomal peptide synthetase (NRPS) enzymology are well studied. However, the timing and mechanisms of post PKS-NRPS oxidations by P450 monooxygenases encoded in PTM biosynthetic gene clusters (BGCs) remain poorly characterized. Here we demonstrate that CftA, encoded in clifednamide-type PTM BGCs, is a multifunctional P450 monooxygenase capable of converting the C29-C30 ethyl side chain of ikarugamycin to either a C29-C30 methyl ketone or a C29-C30 hydroxymethyl ketone through C-H bond activation, resulting in the formation of clifednamide A or clifednamide C, respectively. We also report the complete structure of clifednamide C solved via multidimensional NMR (COSY, HSQC, HMBC, NOESY, and TOCSY) using material purified from an engineered Streptomyces strain optimized for production. Finally, the in vitro reconstitution of recombinant CftA catalytic activity revealed the oxidation cascade for sequential conversion of ikarugamycin to clifednamide A and clifednamide C. Our findings confirm prior genetics-based predictions on the origins of clifednamide complexity via P450s encoded in PTM BGCs and place CftA into a growing group of multifunctional P450s that tailor PTM natural products through late-stage regioselective C-H bond activation.
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Affiliation(s)
- Jinping Yang
- Department of Chemistry, Washington University in St. Louis, One Brookings Drive, St. Louis, Missouri 63130, United States
| | - Yunci Qi
- Department of Biology, Washington University in St. Louis, One Brookings Drive, St. Louis, Missouri 63130, United States
| | - Joshua A V Blodgett
- Department of Biology, Washington University in St. Louis, One Brookings Drive, St. Louis, Missouri 63130, United States
| | - Timothy A Wencewicz
- Department of Chemistry, Washington University in St. Louis, One Brookings Drive, St. Louis, Missouri 63130, United States
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20
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Tsai K, Stojković V, Noda-Garcia L, Young ID, Myasnikov AG, Kleinman J, Palla A, Floor SN, Frost A, Fraser JS, Tawfik DS, Fujimori DG. Directed evolution of the rRNA methylating enzyme Cfr reveals molecular basis of antibiotic resistance. eLife 2022; 11:e70017. [PMID: 35015630 PMCID: PMC8752094 DOI: 10.7554/elife.70017] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/04/2021] [Accepted: 11/25/2021] [Indexed: 12/11/2022] Open
Abstract
Alteration of antibiotic binding sites through modification of ribosomal RNA (rRNA) is a common form of resistance to ribosome-targeting antibiotics. The rRNA-modifying enzyme Cfr methylates an adenosine nucleotide within the peptidyl transferase center, resulting in the C-8 methylation of A2503 (m8A2503). Acquisition of cfr results in resistance to eight classes of ribosome-targeting antibiotics. Despite the prevalence of this resistance mechanism, it is poorly understood whether and how bacteria modulate Cfr methylation to adapt to antibiotic pressure. Moreover, direct evidence for how m8A2503 alters antibiotic binding sites within the ribosome is lacking. In this study, we performed directed evolution of Cfr under antibiotic selection to generate Cfr variants that confer increased resistance by enhancing methylation of A2503 in cells. Increased rRNA methylation is achieved by improved expression and stability of Cfr through transcriptional and post-transcriptional mechanisms, which may be exploited by pathogens under antibiotic stress as suggested by natural isolates. Using a variant that achieves near-stoichiometric methylation of rRNA, we determined a 2.2 Å cryo-electron microscopy structure of the Cfr-modified ribosome. Our structure reveals the molecular basis for broad resistance to antibiotics and will inform the design of new antibiotics that overcome resistance mediated by Cfr.
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Affiliation(s)
- Kaitlyn Tsai
- Department of Cellular and Molecular Pharmacology, University of California San FranciscoSan FranciscoUnited States
| | - Vanja Stojković
- Department of Cellular and Molecular Pharmacology, University of California San FranciscoSan FranciscoUnited States
| | - Lianet Noda-Garcia
- Department of Biomolecular Sciences, Weizmann Institute of ScienceRehovotIsrael
| | - Iris D Young
- Department of Bioengineering and Therapeutic Sciences, University of California San FranciscoSan FranciscoUnited States
| | - Alexander G Myasnikov
- Department of Biochemistry and Biophysics, University of California San FranciscoSan FranciscoUnited States
| | - Jordan Kleinman
- Department of Cellular and Molecular Pharmacology, University of California San FranciscoSan FranciscoUnited States
| | - Ali Palla
- Department of Cellular and Molecular Pharmacology, University of California San FranciscoSan FranciscoUnited States
| | - Stephen N Floor
- Helen Diller Family Comprehensive Cancer Center, University of California San FranciscoSan FranciscoUnited States
- Department of Cell and Tissue Biology, University of California San FranciscoSan FranciscoUnited States
| | - Adam Frost
- Department of Biochemistry and Biophysics, University of California San FranciscoSan FranciscoUnited States
- Quantitative Biosciences Institute, University of California San FranciscoSan FranciscoUnited States
| | - James S Fraser
- Department of Bioengineering and Therapeutic Sciences, University of California San FranciscoSan FranciscoUnited States
- Quantitative Biosciences Institute, University of California San FranciscoSan FranciscoUnited States
| | - Dan S Tawfik
- Department of Biomolecular Sciences, Weizmann Institute of ScienceRehovotIsrael
| | - Danica Galonić Fujimori
- Department of Cellular and Molecular Pharmacology, University of California San FranciscoSan FranciscoUnited States
- Quantitative Biosciences Institute, University of California San FranciscoSan FranciscoUnited States
- Department of Pharmaceutical Chemistry, University of California San FranciscoSan FranciscoUnited States
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21
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Biosynthesis and regulation of terpenoids from basidiomycetes: exploration of new research. AMB Express 2021; 11:150. [PMID: 34779947 PMCID: PMC8594250 DOI: 10.1186/s13568-021-01304-7] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/12/2021] [Accepted: 10/16/2021] [Indexed: 12/15/2022] Open
Abstract
Basidiomycetes, also known as club fungi, consist of a specific group of fungi. Basidiomycetes produce a large number of secondary metabolites, of which sesquiterpenoids, diterpenoids and triterpenoids are the primary components. However, these terpenoids tend to be present in low amounts, which makes it difficult to meet application requirements. Terpenoid biosynthesis improves the quantity of these secondary metabolites. However, current understanding of the biosynthetic mechanism of terpenoids in basidiomycetes is insufficient. Therefore, this article reviews the latest research on the biosynthesis of terpenoids in basidiomycetes and summarizes the CYP450 involved in the biosynthesis of terpenoids in basidiomycetes. We also propose opportunities and challenges for chassis microbial heterologous production of terpenoids in basidiomycetes and provide a reference basis for the better development of basidiomycete engineering.
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22
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Berntsen LN, Solvi TN, Sørnes K, Wragg DS, Sandtorv AH. Cu-catalyzed C(sp 2)-N-bond coupling of boronic acids and cyclic imides. Chem Commun (Camb) 2021; 57:11851-11854. [PMID: 34698731 DOI: 10.1039/d1cc04356k] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Abstract
A general Cu-catalyzed strategy for coupling cyclic imides and alkenylboronic acids by forming C(sp2)-N-bonds is reported. The method enables the practical and mild preparation of (E)-enimides. A large range of cyclic imides are allowed, and di- and tri-substituted alkenylboronic acids can be used. Full retention was observed in the configuration of the alkene double bond in the coupled products. The method is also applicable for preparing N-arylimides, using arylboronic acids as coupling partners. The usefulness of this strategy is exemplified by the convenient derivatization of the chemotherapy medication 5-flurouracil, the nucleoside uridine and the anti-epileptic drug phenytoin.
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Affiliation(s)
| | | | - Kristian Sørnes
- Department of Chemistry, University of Oslo, Oslo N-0315, Norway.
| | - David S Wragg
- Department of Chemistry, University of Oslo, Oslo N-0315, Norway.
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23
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Souza MA, Palhano HS, Macci D, Broch GM, Tissiani L, Rauber BF, Cecchin D, Bervian J, de Almeida Gomes BPF, Gabrielli ES. Influence of ultrasonic activation on antimicrobial activity of a new final irrigant containing glycolic acid: An in vitro study. AUST ENDOD J 2021; 47:531-537. [PMID: 33901338 DOI: 10.1111/aej.12517] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/07/2021] [Revised: 03/19/2021] [Accepted: 04/11/2021] [Indexed: 11/29/2022]
Abstract
This study evaluated the influence of ultrasonic activation (US) on the antimicrobial activity of a new final irrigant containing glycolic acid (GA). Extracted teeth were used, being 70 to counting of colony-forming units (CFUs) and 35 to confocal laser scanning microscopy. Samples were inoculated with Enterococcus faecalis and divided into 7 groups: distilled water + US; 17% EDTA; Qmix; 17% GA; 17% EDTA + US; QMix + US; and 17% GA + US and kept in contact with test solution for 1 min in the groups with or no US. In the CFUs, the highest bacterial reduction was observed in QMix + US group, followed by QMix and GA + US. In the confocal evaluation, the lowest number of viable cells was observed in EDTA + US, with no statistical difference from QMix, QMix + US and GA + US (P > 0.05). The use of US improves the antimicrobial activity of EDTA and GA, being statistically different from the isolated use of these final irrigants in both evaluation tests.
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Affiliation(s)
| | | | - Dierro Macci
- School of Dentistry, University of Passo Fundo, Passo Fundo, RS, Brazil
| | | | - Luanda Tissiani
- School of Dentistry, University of Passo Fundo, Passo Fundo, RS, Brazil
| | | | - Doglas Cecchin
- School of Dentistry, University of Passo Fundo, Passo Fundo, RS, Brazil
| | - Juliane Bervian
- School of Dentistry, University of Passo Fundo, Passo Fundo, RS, Brazil
| | | | - Ezequiel Santin Gabrielli
- School of Dentistry, University of Passo Fundo, Passo Fundo, RS, Brazil.,School of Dentistry of Piracicaba, State University of Campinas, Piracicaba, SP, Brazil
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24
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Dibrell SE, Tao Y, Reisman SE. Synthesis of Complex Diterpenes: Strategies Guided by Oxidation Pattern Analysis. Acc Chem Res 2021; 54:1360-1373. [PMID: 33621061 DOI: 10.1021/acs.accounts.0c00858] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Abstract
With complex molecular architectures, intriguing oxidation patterns, and wide-ranging biological activities, diterpene natural products have greatly impacted research in organic chemistry and drug discovery. Our laboratory has completed total syntheses of several highly oxidized diterpenes, including the ent-kauranoids maoecrystal Z, trichorabdal A, and longikaurin E; the antibiotic pleuromutilin; and the insecticides ryanodol, ryanodine, and perseanol. In this Account, we show how analysis of oxidation patterns and inherent functional group relationships can inform key C-C bond disconnections that greatly simplify the complexity of polycyclic structures and streamline their total syntheses. In articulating these concepts, we draw heavily from the approaches to synthetic strategy that were codified by Evans, Corey, Seebach, and others, based on the formalism that heteroatoms impose an alternating acceptor and donor reactivity pattern upon a carbon skeleton. We find these ideas particularly useful when considering oxidized diterpenes as synthetic targets.In the first part of the Account, we describe the use of reductive cyclizations as strategic tactics for building polycyclic systems with γ-hydroxyketone motifs. We have leveraged Sm-ketyl radical cyclizations as "reactivity umpolungs" to generate γ-hydroxyketones in our total syntheses of the Isodon ent-kauranoid diterpenes (-)-maoecrystal Z, (-)-longikaurin E, and (-)-trichorabdal A. Following this work, we identified the same γ-hydroxyketone pattern in the diterpene antibiotic (+)-pleuromutilin, which again inspired the use of a SmI2-mediated reductive cyclization, this time to construct a bridging eight-membered ring. This collection of four total syntheses highlights how reductive cyclizations are particularly effective umpolung tactics when used to simultaneously form rings and introduce 1,4-dioxygenation patterns.In the second part of the Account, we detail the syntheses of the complex and highly oxidized ryanodane and isoryanodane diterpenes and present the oxidation pattern analysis that guided our synthetic designs. We first discuss our 15-step total synthesis of (+)-ryanodol, which incorporated five of the eight oxygen atoms in just two transformations: a dihydroxylation of (S)-pulegone and a SeO2-mediated trioxidation of the A-ring cyclopentenone. This latter transformation gave rise to an independent investigation of SeO2-mediated peroxidations of simple bicyclic cyclopent-2-en-1-ones. The syntheses of (+)-ryanodine and (+)-20-deoxyspiganthine are also presented, which required modified end-game strategies to selectively incorporate the key pyrrole-2-carboxylate ester. Finally, we describe our fragment coupling approach to prepare the isoryanodane diterpene (+)-perseanol. Using a similar oxidation pattern analysis to that developed in the synthesis of ryanodol, we again identified a two-stage strategy to install the five hydroxyl groups. This strategy was enabled by a Pd-mediated carbopalladation/carbonylation cascade and leveraged unexpected, emergent reactivity to sequence a series of late-stage oxidations.While each of the diterpene natural products discussed in this Account present unique synthetic questions, we hope that through their collective discussion, we provide a conceptual framework that condenses and summarizes the chemical knowledge we have learned and inspires future discourse and innovations in strategy design and methodology development.
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Affiliation(s)
- Sara E. Dibrell
- The Warren and Katharine Schlinger Laboratory for Chemistry and Chemical Engineering, Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, California 91125, United States
| | - Yujia Tao
- The Warren and Katharine Schlinger Laboratory for Chemistry and Chemical Engineering, Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, California 91125, United States
| | - Sarah E. Reisman
- The Warren and Katharine Schlinger Laboratory for Chemistry and Chemical Engineering, Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, California 91125, United States
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25
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Hsu IT, Tomanik M, Herzon SB. Metric-Based Analysis of Convergence in Complex Molecule Synthesis. Acc Chem Res 2021; 54:903-916. [PMID: 33523640 DOI: 10.1021/acs.accounts.0c00817] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Convergent syntheses are characterized by the coupling of two or more synthetic intermediates of similar complexity, often late in a pathway. At its limit, a fully convergent synthesis is achieved when commercial or otherwise readily available intermediates are coupled to form the final target in a single step. Of course, in all but exceptional circumstances this level of convergence is purely hypothetical; in practice, additional steps are typically required to progress from fragment coupling to the target. Additionally, the length of the sequence required to access each target is a primary consideration in synthetic design.In this Account, we provide an overview of alkaloid, polyketide, and diterpene metabolites synthesized in our laboratory and present parameters that may be used to put the degree of convergence of each synthesis on quantitative footing. We begin with our syntheses of the antiproliferative, antimicrobial bacterial metabolite (-)-kinamycin F (1) and related dimeric structure (-)-lomaiviticin aglycon (2). These synthetic routes featured a three-step sequence to construct a complex diazocyclopentadiene found in both targets and an oxidative dimerization to unite the two halves of (-)-lomaiviticin aglycon (2). We then follow with our synthesis of the antineurodegenerative alkaloid (-)-huperzine A (3). Our route to (-)-huperzine A (3) employed a diastereoselective three-component coupling reaction, followed by the intramolecular α-arylation of a β-ketonitrile intermediate, to form the carbon skeleton of the target. We then present our syntheses of the hasubanan alkaloids (-)-hasubanonine (4), (-)-delavayine (5), (-)-runanine (6), (+)-periglaucine B (7), and (-)-acutumine (8). These alkaloids bear a 7-azatricyclo[4.3.3.01,6]dodecane (propellane) core and a highly oxidized cyclohexenone ring. The propellane structure was assembled by the addition of an aryl acetylide to a complex iminium ion, followed by intramolecular 1,4-addition. We then present our synthesis of the guanidinium alkaloid (+)-batzelladine B (9), which contains two complex polycyclic guanidine residues united by an ester linkage. This target was logically disconnected by an esterification to allow for the independent synthesis of each guanidine residue. A carefully orchestrated cascade reaction provided (+)-batzelladine B (9) in a single step following fragment coupling by esterification. We then discuss our synthesis of the diterpene fungal metabolite (+)-pleuromutilin (10). The synthesis of (+)-pleuromutilin (10) proceeded via a fragment coupling involving two neopentylic reagents and employed a nickel-catalyzed reductive cyclization reaction to close the eight-membered ring, ultimately providing access to (+)-pleuromutilin (10), (+)-12-epi-pleuromutilin (11), and (+)-12-epi-mutilin (12). Finally, we discuss our synthesis of (-)-myrocin G (13), a tricyclic pimarane diterpene that was assembled by a convergent annulation.In the final section of this Account, we present several paramaters to analyze and quantitatively assess the degree of convergence of each synthesis. These parameters include: (1) the number of steps required following the point of convergence, (2) the difference in the number of steps required to prepare each coupling partner, (3) the percentage of carbons (or, more broadly, atoms) present at the point of convergence, and (4) the complexity generated in the fragment coupling step. While not an exhaustive list, these parameters bring the strengths and weaknesses each synthetic strategy to light, emphasizing the key contributors to the degree of convergence of each route while also highlighting the nuances of these analyses.
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Affiliation(s)
- Ian Tingyung Hsu
- Department of Chemistry, Yale University, New Haven, Connecticut 06520, United States
| | - Martin Tomanik
- Department of Chemistry, Yale University, New Haven, Connecticut 06520, United States
| | - Seth B. Herzon
- Department of Chemistry, Yale University, New Haven, Connecticut 06520, United States
- Department of Pharmacology, Yale School of Medicine, New Haven, Connecticut 06520, United States
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Wei S, Bao X, Nawaz S, Qu J, Wang B. Identification of a tartrate-based modular guanidine towards highly asymmetric Michael addition of 3-aminooxindoles to nitroolefins. Tetrahedron Lett 2021. [DOI: 10.1016/j.tetlet.2020.152741] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
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27
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Motika SE, Hergenrother PJ. Re-engineering natural products to engage new biological targets. Nat Prod Rep 2020; 37:1395-1403. [PMID: 33034322 PMCID: PMC7720426 DOI: 10.1039/d0np00059k] [Citation(s) in RCA: 39] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
Covering: up to 2020 Natural products have a long history in drug discovery, with their inherent biological activity often tailored by medicinal chemists to arrive at the final drug product. This process is illustrated by numerous examples, including the conversion of epothilone to ixabepilone, erythromycin to azithromycin, and lovastatin to simvastatin. However, natural products are also fruitful starting points for the creation of complex and diverse compounds, especially those that are markedly different from the parent natural product and accordingly do not retain the biological activity of the parent. The resulting products have physiochemical properties that differ considerably when compared to traditional screening collections, thus affording an opportunity to discover novel biological activity. The synthesis of new structural frameworks from natural products thus yields value-added compounds, as demonstrated in the last several years with multiple biological discoveries emerging from these collections. This Highlight details a handful of these studies, describing new compounds derived from natural products that have biological activity and cellular targets different from those evoked/engaged by the parent. Such re-engineering of natural products offers the potential for discovering compounds with interesting and unexpected biological activity.
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Affiliation(s)
- Stephen E Motika
- Department of Chemistry, Institute for Genomic Biology, Cancer Center at Illinois, University of Illinois, Urbana-Champaign, USA.
| | - Paul J Hergenrother
- Department of Chemistry, Institute for Genomic Biology, Cancer Center at Illinois, University of Illinois, Urbana-Champaign, USA.
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Cao MY, Ma BJ, Lao ZQ, Wang H, Wang J, Liu J, Xing K, Huang YH, Gan KJ, Gao W, Wang H, Hong X, Lu HH. Optically Active Flavaglines-Inspired Molecules by a Palladium-Catalyzed Decarboxylative Dearomative Asymmetric Allylic Alkylation. J Am Chem Soc 2020; 142:12039-12045. [PMID: 32584568 DOI: 10.1021/jacs.0c05113] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023]
Abstract
With the aid of a class of newly discovered Trost-type bisphosphine ligands bearing a chiral cycloalkane framework, the Pd-catalyzed decarboxylative dearomative asymmetric allylic alkylation (AAA) of benzofurans was achieved with high efficiency [0.2-1.0 mol% Pd2(dba)3/L], good generality, and high enantioselectivity (>30 examples, 82-99% yield and 90-96% ee). Moreover, a diversity-oriented synthesis (DOS) of previously unreachable flavaglines is disclosed. It features a reliable and scalable sequence of the freshly developed Tsuji-Trost-Stoltz AAA, a Wacker-Grubbs-Stoltz oxidation, an intra-benzoin condensation, and a conjugate addition, which allows the efficient construction of the challenging and compact cyclopenta[b]benzofuran scaffold with contiguous stereocenters. This strategy offers a new avenue for developing flavagline-based drugs.
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Affiliation(s)
- Meng-Yue Cao
- Key Laboratory of Precise Synthesis of Functional Molecules of Zhejiang Province, School of Science, Westlake University, 18 Shilongshan Road, Hangzhou 310024, China.,Institute of Natural Sciences, Westlake Institute for Advanced Study, Hangzhou 310024, China.,Department of Chemistry, Zhejiang University, 866 Yuhangtang Road, Hangzhou 310058, China
| | - Bin-Jie Ma
- Key Laboratory of Precise Synthesis of Functional Molecules of Zhejiang Province, School of Science, Westlake University, 18 Shilongshan Road, Hangzhou 310024, China.,Institute of Natural Sciences, Westlake Institute for Advanced Study, Hangzhou 310024, China
| | - Zhi-Qi Lao
- Key Laboratory of Precise Synthesis of Functional Molecules of Zhejiang Province, School of Science, Westlake University, 18 Shilongshan Road, Hangzhou 310024, China.,Institute of Natural Sciences, Westlake Institute for Advanced Study, Hangzhou 310024, China
| | - Hongliang Wang
- Department of Chemistry, Zhejiang University, 866 Yuhangtang Road, Hangzhou 310058, China
| | - Jing Wang
- Key Laboratory of Precise Synthesis of Functional Molecules of Zhejiang Province, School of Science, Westlake University, 18 Shilongshan Road, Hangzhou 310024, China.,Institute of Natural Sciences, Westlake Institute for Advanced Study, Hangzhou 310024, China
| | - Juan Liu
- Institute of Advanced Synthesis (IAS), Nanjing Tech University, 30 South Puzhu Road, Nanjing 211816, China
| | - Kuan Xing
- Key Laboratory of Precise Synthesis of Functional Molecules of Zhejiang Province, School of Science, Westlake University, 18 Shilongshan Road, Hangzhou 310024, China.,Institute of Natural Sciences, Westlake Institute for Advanced Study, Hangzhou 310024, China
| | - Yu-Hao Huang
- Key Laboratory of Precise Synthesis of Functional Molecules of Zhejiang Province, School of Science, Westlake University, 18 Shilongshan Road, Hangzhou 310024, China.,Institute of Natural Sciences, Westlake Institute for Advanced Study, Hangzhou 310024, China
| | - Kang-Ji Gan
- Key Laboratory of Precise Synthesis of Functional Molecules of Zhejiang Province, School of Science, Westlake University, 18 Shilongshan Road, Hangzhou 310024, China.,Institute of Natural Sciences, Westlake Institute for Advanced Study, Hangzhou 310024, China.,Department of Chemistry, Zhejiang University, 866 Yuhangtang Road, Hangzhou 310058, China
| | - Wei Gao
- Institute of Advanced Synthesis (IAS), Nanjing Tech University, 30 South Puzhu Road, Nanjing 211816, China
| | - Huaimin Wang
- Key Laboratory of Precise Synthesis of Functional Molecules of Zhejiang Province, School of Science, Westlake University, 18 Shilongshan Road, Hangzhou 310024, China.,Institute of Natural Sciences, Westlake Institute for Advanced Study, Hangzhou 310024, China
| | - Xin Hong
- Department of Chemistry, Zhejiang University, 866 Yuhangtang Road, Hangzhou 310058, China
| | - Hai-Hua Lu
- Key Laboratory of Precise Synthesis of Functional Molecules of Zhejiang Province, School of Science, Westlake University, 18 Shilongshan Road, Hangzhou 310024, China.,Institute of Natural Sciences, Westlake Institute for Advanced Study, Hangzhou 310024, China.,Institute of Advanced Synthesis (IAS), Nanjing Tech University, 30 South Puzhu Road, Nanjing 211816, China.,Department of Chemistry, Zhejiang University, 866 Yuhangtang Road, Hangzhou 310058, China
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29
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Hu YJ, Li LX, Han JC, Min L, Li CC. Recent Advances in the Total Synthesis of Natural Products Containing Eight-Membered Carbocycles (2009-2019). Chem Rev 2020; 120:5910-5953. [PMID: 32343125 DOI: 10.1021/acs.chemrev.0c00045] [Citation(s) in RCA: 93] [Impact Index Per Article: 18.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Abstract
Natural products containing eight-membered carbocycles constitute a class of structurally intriguing and biologically important molecules such as the famous diterpenes taxol and vinigrol. Such natural products are being increasingly investigated because of their fascinating architectural features and potent medicinal properties. However, synthesis of natural products with cyclooctane moieties has proved to be highly challenging. This review highlights the recently completed total syntheses of natural products with eight-membered carbocycles with a focus on strategic considerations. A collection of 27 representative studies from the literature covering the decade from 2009 to 2019 is described in chronological order with relevant studies grouped together, including syntheses of the same natural product by different research groups using different strategies. Finally, a summary and outlook including a discussion of the major features of each strategy used in the syntheses are presented. This review illustrates the diversity and creativity in the elegant synthetic designs of eight-membered carbocycles. We hope this review will provide timely illumination and beneficial guidance for future synthetic efforts for organic chemists who are interested in this area.
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Affiliation(s)
- Ya-Jian Hu
- Shenzhen Grubbs Institute and Department of Chemistry, Southern University of Science and Technology (SUSTech), Shenzhen 518055, China
| | - Li-Xuan Li
- Shenzhen Grubbs Institute and Department of Chemistry, Southern University of Science and Technology (SUSTech), Shenzhen 518055, China
| | - Jing-Chun Han
- Shenzhen Grubbs Institute and Department of Chemistry, Southern University of Science and Technology (SUSTech), Shenzhen 518055, China
| | - Long Min
- Shenzhen Grubbs Institute and Department of Chemistry, Southern University of Science and Technology (SUSTech), Shenzhen 518055, China
| | - Chuang-Chuang Li
- Shenzhen Grubbs Institute and Department of Chemistry, Southern University of Science and Technology (SUSTech), Shenzhen 518055, China
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30
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Trost BM, Min C. Total synthesis of terpenes via palladium-catalysed cyclization strategy. Nat Chem 2020; 12:568-573. [PMID: 32231261 DOI: 10.1038/s41557-020-0439-y] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/13/2019] [Accepted: 02/10/2020] [Indexed: 11/09/2022]
Abstract
Nature's synthetic plans to construct molecules have been developed over millions of years of evolution and frequently prove to be among the most sophisticated. Mimicking nature's route can be a direct and feasible way for synthetic organic chemists to construct complicated molecules. However, lacking nature's ability to manipulate enzymes often prevents us from reproducing the same route. Modifying nature's approaches can provide a simpler synthetic alternative to access complex structural target molecules. Here we report a strategy that simplifies the synthesis of terpenes by inverting the order of nature's two-phase biosynthesis route. We first unite simple molecules into a polyfunctionalized linear polyenyne, with all the desired carbons and oxygens in the targeted places. This compound then undergoes polyenyne cycloisomerization, in the presence of all the functional groups, to give polyoxidized terpenes. The key reaction is a palladium-catalysed polyenyne cycloisomerization that not only tolerates the presence of all of the oxygen functionalities, but also is facilitated by them.
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Affiliation(s)
- Barry M Trost
- Department of Chemistry, Stanford University, Stanford, CA, USA.
| | - Chang Min
- Department of Chemistry, Stanford University, Stanford, CA, USA
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31
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32
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Wang Z. Construction of all-carbon quaternary stereocenters by catalytic asymmetric conjugate addition to cyclic enones in natural product synthesis. Org Chem Front 2020. [DOI: 10.1039/d0qo00763c] [Citation(s) in RCA: 25] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
This review discusses the construction of all-carbon quaternary stereocenters using catalytic asymmetric conjugate addition and its application in natural product synthesis.
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Affiliation(s)
- Zhuo Wang
- Southern University of Science and Technology
- School of Medicine
- Shenzhen
- People's Republic of China
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33
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Pan D, Mou C, Zan N, Lv Y, Song BA, Chi YR, Jin Z. NaOH-Promoted Chemoselective Cascade Cyclization of Cyclopropyl Esters with Unsaturated Imines: Access to Bioactive Cyclopenta[c]pyridine Derivatives. Org Lett 2019; 21:6624-6627. [PMID: 31411487 DOI: 10.1021/acs.orglett.9b02088] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Abstract
A chemoselective cascade cycloaddition reaction is developed for green and efficient access to cyclopenta[c]pyridine derivatives. Simple and inexpensive NaOH is used as the sole catalyst for this process. The δ-carbon of cyclopropyl ester is activated as a nucleophilic carbon to initiate highly chemoselective cascade reactions. Cyclopenta[c]pyridines bearing various substituents are afforded in excellent yields. Preliminary studies on the bioactivities of the afforded products show promising antibacterial activities for potential applications in plant protections.
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Affiliation(s)
- Dingwu Pan
- Laboratory Breeding Base of Green Pesticide and Agricultural Bioengineering, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Guizhou University, Huaxi District, Guiyang 550025, China
| | - Chengli Mou
- Guizhou University of Traditional Chinese Medicine, Huaxi District, Guiyang 550025, China
| | - Ningning Zan
- Laboratory Breeding Base of Green Pesticide and Agricultural Bioengineering, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Guizhou University, Huaxi District, Guiyang 550025, China
| | - Ya Lv
- Laboratory Breeding Base of Green Pesticide and Agricultural Bioengineering, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Guizhou University, Huaxi District, Guiyang 550025, China
| | - Bao-An Song
- Laboratory Breeding Base of Green Pesticide and Agricultural Bioengineering, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Guizhou University, Huaxi District, Guiyang 550025, China
| | - Yonggui Robin Chi
- Laboratory Breeding Base of Green Pesticide and Agricultural Bioengineering, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Guizhou University, Huaxi District, Guiyang 550025, China.,Division of Chemistry & Biological Chemistry, School of Physical & Mathematical Sciences, Nanyang Technological University, Singapore 637371, Singapore
| | - Zhichao Jin
- Laboratory Breeding Base of Green Pesticide and Agricultural Bioengineering, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Guizhou University, Huaxi District, Guiyang 550025, China
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Yang J, Ji DW, Hu YC, Min XT, Zhou X, Chen QA. Cobalt-catalyzed hydroxymethylarylation of terpenes with formaldehyde and arenes. Chem Sci 2019; 10:9560-9564. [PMID: 32055328 PMCID: PMC6979501 DOI: 10.1039/c9sc03747k] [Citation(s) in RCA: 46] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2019] [Accepted: 08/26/2019] [Indexed: 01/01/2023] Open
Abstract
A cobalt(iii)-catalyzed C–H activation strategy has been developed to facilitate hydroxymethylarylation of terpenes with formaldehyde and arenes with high chemo- and regio-selectivities.
Terpenes, consisting of isoprene monomer units, represent a family of naturally abundant compounds. The difunctionalization of terpenes is highly appealing yet remains challenging, since the multiple unbiased C
Created by potrace 1.16, written by Peter Selinger 2001-2019
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C bonds of terpenes lead to difficulty in controlling the regioselectivity. Herein, a cobalt(iii)-catalyzed C–H activation strategy has been developed to facilitate hydroxymethylarylation of terpenes with formaldehyde and arenes with high chemo- and regio-selectivities. These (chemo- and regio-) selectivities are governed by the coordination abilities of isoprene, directing groups and the steric effect. This terpene difunctionalization also features high atom and step economy through a C–H addition pathway.
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Affiliation(s)
- Jun Yang
- Institute of Homogeneous Catalysis , College of Chemistry , Sichuan University , Chengdu 610064 , P. R. China . .,Dalian Institute of Chemical Physics , Chinese Academy of Sciences , Dalian 116023 , P. R. China . ; [http://www.lbcs.dicp.ac.cn]
| | - Ding-Wei Ji
- Dalian Institute of Chemical Physics , Chinese Academy of Sciences , Dalian 116023 , P. R. China . ; [http://www.lbcs.dicp.ac.cn]
| | - Yan-Cheng Hu
- Dalian Institute of Chemical Physics , Chinese Academy of Sciences , Dalian 116023 , P. R. China . ; [http://www.lbcs.dicp.ac.cn]
| | - Xiang-Ting Min
- Dalian Institute of Chemical Physics , Chinese Academy of Sciences , Dalian 116023 , P. R. China . ; [http://www.lbcs.dicp.ac.cn]
| | - Xiangge Zhou
- Institute of Homogeneous Catalysis , College of Chemistry , Sichuan University , Chengdu 610064 , P. R. China .
| | - Qing-An Chen
- Dalian Institute of Chemical Physics , Chinese Academy of Sciences , Dalian 116023 , P. R. China . ; [http://www.lbcs.dicp.ac.cn]
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35
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Llabani E, Hicklin RW, Lee HY, Motika SE, Crawford LA, Weerapana E, Hergenrother PJ. Diverse compounds from pleuromutilin lead to a thioredoxin inhibitor and inducer of ferroptosis. Nat Chem 2019; 11:521-532. [PMID: 31086302 PMCID: PMC6639018 DOI: 10.1038/s41557-019-0261-6] [Citation(s) in RCA: 170] [Impact Index Per Article: 28.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2018] [Accepted: 03/25/2019] [Indexed: 02/08/2023]
Abstract
The chemical diversification of natural products provides a robust and general method for the creation of stereochemically rich and structurally diverse small molecules. The resulting compounds have physicochemical traits different from those in most screening collections, and as such are an excellent source for biological discovery. Herein, we subject the diterpene natural product pleuromutilin to reaction sequences focused on creating ring system diversity in few synthetic steps. This effort resulted in a collection of compounds with previously unreported ring systems, providing a novel set of structurally diverse and highly complex compounds suitable for screening in a variety of different settings. Biological evaluation identified the novel compound ferroptocide, a small molecule that rapidly and robustly induces ferroptotic death of cancer cells. Target identification efforts and CRISPR knockout studies reveal that ferroptocide is an inhibitor of thioredoxin, a key component of the antioxidant system in the cell. Ferroptocide positively modulates the immune system in a murine model of breast cancer and will be a useful tool to study the utility of pro-ferroptotic agents for treatment of cancer.
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Affiliation(s)
- Evijola Llabani
- Department of Chemistry, Roger Adams Laboratory, University of Illinois, Urbana, IL, USA
| | - Robert W Hicklin
- Department of Chemistry, Roger Adams Laboratory, University of Illinois, Urbana, IL, USA
| | - Hyang Yeon Lee
- Department of Chemistry, Roger Adams Laboratory, University of Illinois, Urbana, IL, USA
| | - Stephen E Motika
- Department of Chemistry, Roger Adams Laboratory, University of Illinois, Urbana, IL, USA
| | - Lisa A Crawford
- Department of Chemistry, Boston College, Chestnut Hill, MA, USA
| | | | - Paul J Hergenrother
- Department of Chemistry, Roger Adams Laboratory, University of Illinois, Urbana, IL, USA.
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36
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Llabani E, Hicklin RW, Lee HY, Motika SE, Crawford LA, Weerapana E, Hergenrother PJ. Diverse compounds from pleuromutilin lead to a thioredoxin inhibitor and inducer of ferroptosis. Nat Chem 2019. [PMID: 31086302 DOI: 10.1021/acscentsci.9b00916/suppl_file/oc9b00916_si_001.pdf] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/21/2023]
Abstract
The chemical diversification of natural products provides a robust and general method for the creation of stereochemically rich and structurally diverse small molecules. The resulting compounds have physicochemical traits different from those in most screening collections, and as such are an excellent source for biological discovery. Herein, we subject the diterpene natural product pleuromutilin to reaction sequences focused on creating ring system diversity in few synthetic steps. This effort resulted in a collection of compounds with previously unreported ring systems, providing a novel set of structurally diverse and highly complex compounds suitable for screening in a variety of different settings. Biological evaluation identified the novel compound ferroptocide, a small molecule that rapidly and robustly induces ferroptotic death of cancer cells. Target identification efforts and CRISPR knockout studies reveal that ferroptocide is an inhibitor of thioredoxin, a key component of the antioxidant system in the cell. Ferroptocide positively modulates the immune system in a murine model of breast cancer and will be a useful tool to study the utility of pro-ferroptotic agents for treatment of cancer.
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Affiliation(s)
- Evijola Llabani
- Department of Chemistry, Roger Adams Laboratory, University of Illinois, Urbana, IL, USA
| | - Robert W Hicklin
- Department of Chemistry, Roger Adams Laboratory, University of Illinois, Urbana, IL, USA
| | - Hyang Yeon Lee
- Department of Chemistry, Roger Adams Laboratory, University of Illinois, Urbana, IL, USA
| | - Stephen E Motika
- Department of Chemistry, Roger Adams Laboratory, University of Illinois, Urbana, IL, USA
| | - Lisa A Crawford
- Department of Chemistry, Boston College, Chestnut Hill, MA, USA
| | | | - Paul J Hergenrother
- Department of Chemistry, Roger Adams Laboratory, University of Illinois, Urbana, IL, USA.
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37
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Chen Y, Hu J, Guo L, Zhong W, Ning C, Xu J. A Concise Total Synthesis of (−)‐Himalensine A. Angew Chem Int Ed Engl 2019; 58:7390-7394. [DOI: 10.1002/anie.201902908] [Citation(s) in RCA: 36] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/07/2019] [Indexed: 12/14/2022]
Affiliation(s)
- Yuye Chen
- Department of Chemistry and Shenzhen Grubbs InstituteSouthern University of Science and Technology Shenzhen Guangdong China
- State Key Laboratory of Quality Research in Chinese MedicineInstitute of Chinese Medical SciencesUniversity of Macau China
| | - Jingping Hu
- Department of Chemistry and Shenzhen Grubbs InstituteSouthern University of Science and Technology Shenzhen Guangdong China
- School of Chemistry and Chemical EngineeringHarbin Institute of Technology Harbin Heilongjiang China
| | - Lian‐Dong Guo
- Department of Chemistry and Shenzhen Grubbs InstituteSouthern University of Science and Technology Shenzhen Guangdong China
| | - Weihe Zhong
- Department of Chemistry and Shenzhen Grubbs InstituteSouthern University of Science and Technology Shenzhen Guangdong China
| | - Chengqing Ning
- Department of Chemistry and Shenzhen Grubbs InstituteSouthern University of Science and Technology Shenzhen Guangdong China
- SUSTech Academy for Advanced Interdisciplinary Studies Shenzhen Guangdong China
| | - Jing Xu
- Department of Chemistry and Shenzhen Grubbs InstituteSouthern University of Science and Technology Shenzhen Guangdong China
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38
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Yñigez-Gutierrez AE, Bachmann BO. Fixing the Unfixable: The Art of Optimizing Natural Products for Human Medicine. J Med Chem 2019; 62:8412-8428. [PMID: 31026161 DOI: 10.1021/acs.jmedchem.9b00246] [Citation(s) in RCA: 27] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Abstract
Molecules isolated from natural sources including bacteria, fungi, and plants are a long-standing source of therapeutics that continue to add to our medicinal arsenal today. Despite their potency and prominence in the clinic, complex natural products often exhibit a number of liabilities that hinder their development as therapeutics, which may be partially responsible for the current trend away from natural product discovery, research, and development. However, advances in synthetic biology and organic synthesis have inspired a new generation of natural product chemists to tackle powerful undeveloped scaffolds. In this Perspective, we will present case studies demonstrating the historical and current focus on making targeted, but significant, changes to natural product scaffolds via biosynthetic gene cluster manipulation, total synthesis, semisynthesis, or a combination of these methods, with a focus on increasing activity, decreasing toxicity, or improving chemical and pharmacological properties.
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Affiliation(s)
| | - Brian O Bachmann
- Department of Chemistry , Vanderbilt University , Nashville , Tennessee 37235 , United States
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39
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Chen Y, Hu J, Guo L, Zhong W, Ning C, Xu J. A Concise Total Synthesis of (−)‐Himalensine A. Angew Chem Int Ed Engl 2019. [DOI: 10.1002/ange.201902908] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Affiliation(s)
- Yuye Chen
- Department of Chemistry and Shenzhen Grubbs InstituteSouthern University of Science and Technology Shenzhen Guangdong China
- State Key Laboratory of Quality Research in Chinese MedicineInstitute of Chinese Medical SciencesUniversity of Macau China
| | - Jingping Hu
- Department of Chemistry and Shenzhen Grubbs InstituteSouthern University of Science and Technology Shenzhen Guangdong China
- School of Chemistry and Chemical EngineeringHarbin Institute of Technology Harbin Heilongjiang China
| | - Lian‐Dong Guo
- Department of Chemistry and Shenzhen Grubbs InstituteSouthern University of Science and Technology Shenzhen Guangdong China
| | - Weihe Zhong
- Department of Chemistry and Shenzhen Grubbs InstituteSouthern University of Science and Technology Shenzhen Guangdong China
| | - Chengqing Ning
- Department of Chemistry and Shenzhen Grubbs InstituteSouthern University of Science and Technology Shenzhen Guangdong China
- SUSTech Academy for Advanced Interdisciplinary Studies Shenzhen Guangdong China
| | - Jing Xu
- Department of Chemistry and Shenzhen Grubbs InstituteSouthern University of Science and Technology Shenzhen Guangdong China
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40
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González-Pérez AB, Villar P, de Lera AR. A Computational Study of Model Parent Systems and Reported Aza-(Iso)Nazarov/Aza-(Iso)Piancatelli Electrocyclic Reactions. European J Org Chem 2019. [DOI: 10.1002/ejoc.201900103] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Adán B. González-Pérez
- University of Vigo; Department of Organic Chemistry and Center of Biomedical Research (CINBIO); Lagoas-Marcosende 36310 Vigo Spain
| | - Pedro Villar
- University of Vigo; Department of Organic Chemistry and Center of Biomedical Research (CINBIO); Lagoas-Marcosende 36310 Vigo Spain
| | - Angel R. de Lera
- University of Vigo; Department of Organic Chemistry and Center of Biomedical Research (CINBIO); Lagoas-Marcosende 36310 Vigo Spain
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41
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Huffman BJ, Shenvi RA. Natural Products in the "Marketplace": Interfacing Synthesis and Biology. J Am Chem Soc 2019; 141:3332-3346. [PMID: 30682249 PMCID: PMC6446556 DOI: 10.1021/jacs.8b11297] [Citation(s) in RCA: 53] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Abstract
Drugs are discovered through the biological screening of collections of compounds, followed by optimization toward functional end points. The properties of screening collections are often balanced between diversity, physicochemical favorability, intrinsic complexity, and synthetic tractability (Huggins, D. J.; et al. ACS Chem. Biol. 2011, 6, 208; DOI: 10.1021/cb100420r ). Whereas natural product (NP) collections excel in the first three attributes, NPs suffer a disadvantage on the last point. Academic total synthesis research has worked to solve this problem by devising syntheses of NP leads, diversifying late-stage intermediates, or derivatizing the NP target. This work has led to the discovery of reaction mechanisms, the invention of new methods, and the development of FDA-approved drugs. Few drugs, however, are themselves NPs; instead, NP analogues predominate. Here we highlight past examples of NP analogue development and successful NP-derived drugs. More recently, chemists have explored how NP analogues alter the retrosynthetic analysis of complex scaffolds, merging structural design and synthetic design. This strategy maintains the intrinsic complexity of the NP but can alter the physicochemical properties of the scaffold, like core instability that renders the NP a poor chemotype. Focused libraries based on these syntheses may exclude the NP but maintain the molecular properties that distinguish NP space from synthetic space (Stratton, C. F.; et al. Bioorg. Med. Chem. Lett. 2015, 25, 4802; DOI: 10.1016/j.bmcl.2015.07.014 ), properties that have statistical advantages in clinical progression (Luker, T.; et al. Bioorg. Med. Chem. Lett. 2011, 21, 5673, DOI: 10.1016/j.bmcl.2011.07.074 ; Ritchie, T. J.; Macdonald, S. J. F. Drug Discovery Today 2009, 14, 1011, DOI: 10.1016/j.drudis.2009.07.014 ). Research that expedites synthetic access to NP motifs can prevent homogeneity of chemical matter available for lead discovery. Easily accessed, focused libraries of NP scaffolds can fill empty but active gaps in screening sets and expand the molecular diversity of synthetic collections.
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Affiliation(s)
- Benjamin J. Huffman
- Department of Chemistry, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, California 92037, United States
| | - Ryan A. Shenvi
- Department of Chemistry, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, California 92037, United States
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42
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Ma K, Martin BS, Yin X, Dai M. Natural product syntheses via carbonylative cyclizations. Nat Prod Rep 2019; 36:174-219. [PMID: 29923586 DOI: 10.1039/c8np00033f] [Citation(s) in RCA: 91] [Impact Index Per Article: 15.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
This review summarizes the application of various transition metal-catalyzed/mediated carbonylative cyclization reactions in natural product total synthesis.
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Affiliation(s)
- Kaiqing Ma
- Department of Chemistry
- Center for Cancer Research
- Institute for Drug Discovery
- Purdue University
- West Lafayette
| | - Brandon S. Martin
- Department of Chemistry
- Center for Cancer Research
- Institute for Drug Discovery
- Purdue University
- West Lafayette
| | - Xianglin Yin
- Department of Chemistry
- Center for Cancer Research
- Institute for Drug Discovery
- Purdue University
- West Lafayette
| | - Mingji Dai
- Department of Chemistry
- Center for Cancer Research
- Institute for Drug Discovery
- Purdue University
- West Lafayette
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43
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Goethe O, Heuer A, Ma X, Wang Z, Herzon SB. Antibacterial properties and clinical potential of pleuromutilins. Nat Prod Rep 2019; 36:220-247. [PMID: 29979463 DOI: 10.1039/c8np00042e] [Citation(s) in RCA: 58] [Impact Index Per Article: 9.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Abstract
Covering: up to 2018Pleuromutilins are a clinically validated class of antibiotics derived from the fungal diterpene (+)-pleuromutilin (1). Pleuromutilins inhibit bacterial protein synthesis by binding to the peptidyl transferase center (PTC) of the ribosome. In this review we summarize the biosynthesis and recent total syntheses of (+)-pleuromutilin (1). We review the mode of interaction of pleuromutilins with the bacterial ribosome, which involves binding of the C14 extension and the tricyclic core to the P and A sites of the PTC, respectively. We provide an overview of existing clinical agents, and discuss the three primary modes of bacterial resistance (mutations in ribosomal protein L3, Cfr methylation, and efflux). Finally we collect structure-activity relationships from publicly available reports, and close with some forward looking statements regarding future development.
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Affiliation(s)
- Olivia Goethe
- Department of Chemistry, Yale University, New Haven, Connecticut 06520, USA.
| | - Abigail Heuer
- Department of Chemistry, Yale University, New Haven, Connecticut 06520, USA.
| | - Xiaoshen Ma
- Department of Chemistry, Yale University, New Haven, Connecticut 06520, USA.
| | - Zhixun Wang
- Department of Chemistry, Yale University, New Haven, Connecticut 06520, USA.
| | - Seth B Herzon
- Department of Chemistry, Yale University, New Haven, Connecticut 06520, USA. and Department of Pharmacology, Yale School of Medicine, New Haven, Connecticut 06520, USA
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44
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Sui G, Lv Q, Song X, Guo H, Dai J, Ren L, Lee CS, Zhou W, Hao HD. Chemoselective reduction of aldehydes via a combination of NaBH 4 and acetylacetone. NEW J CHEM 2019. [DOI: 10.1039/c9nj03210j] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Abstract
A bench-stable combination of NaBH4–acetylacetone was developed for the efficient chemoselective reduction of aldehydes in the presence of ketones.
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Affiliation(s)
- Guoqing Sui
- Shaanxi Key Laboratory of Natural Products & Chemical Biology
- College of Chemistry & Pharmacy
- Northwest A&F University
- Yangling
- China
| | - Qingyun Lv
- Shaanxi Key Laboratory of Natural Products & Chemical Biology
- College of Chemistry & Pharmacy
- Northwest A&F University
- Yangling
- China
| | - Xiaoqing Song
- Shaanxi Key Laboratory of Natural Products & Chemical Biology
- College of Chemistry & Pharmacy
- Northwest A&F University
- Yangling
- China
| | - Huihui Guo
- Shaanxi Key Laboratory of Natural Products & Chemical Biology
- College of Chemistry & Pharmacy
- Northwest A&F University
- Yangling
- China
| | - Jiatong Dai
- Shaanxi Key Laboratory of Natural Products & Chemical Biology
- College of Chemistry & Pharmacy
- Northwest A&F University
- Yangling
- China
| | - Li Ren
- Shaanxi Key Laboratory of Natural Products & Chemical Biology
- College of Chemistry & Pharmacy
- Northwest A&F University
- Yangling
- China
| | - Chi-Sing Lee
- Department of Chemistry
- Hong Kong Baptist University
- Kowloon Tong
- China
| | - Wenming Zhou
- Shaanxi Key Laboratory of Natural Products & Chemical Biology
- College of Chemistry & Pharmacy
- Northwest A&F University
- Yangling
- China
| | - Hong-Dong Hao
- Shaanxi Key Laboratory of Natural Products & Chemical Biology
- College of Chemistry & Pharmacy
- Northwest A&F University
- Yangling
- China
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45
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Li Y, Dong Q, Xie Q, Tang P, Zhang M, Qin Y. Enantioselective Synthesis of ABCF Tetracyclic Framework of Daphniphyllum Alkaloid Calyciphylline N. Org Lett 2018; 20:5053-5057. [PMID: 30091930 DOI: 10.1021/acs.orglett.8b02202] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
Affiliation(s)
- Yunfei Li
- Chongqing Key Laboratory of Natural Product Synthesis and Drug Research, School of Pharmaceutical Sciences, Chongqing University, Chongqing 401331, China
| | - Qiuyan Dong
- Chongqing Key Laboratory of Natural Product Synthesis and Drug Research, School of Pharmaceutical Sciences, Chongqing University, Chongqing 401331, China
| | - Qinxia Xie
- Chongqing Key Laboratory of Natural Product Synthesis and Drug Research, School of Pharmaceutical Sciences, Chongqing University, Chongqing 401331, China
| | - Pei Tang
- Chongqing Key Laboratory of Natural Product Synthesis and Drug Research, School of Pharmaceutical Sciences, Chongqing University, Chongqing 401331, China
| | - Min Zhang
- Chongqing Key Laboratory of Natural Product Synthesis and Drug Research, School of Pharmaceutical Sciences, Chongqing University, Chongqing 401331, China
| | - Yong Qin
- Sichuan Engineering Laboratory for Plant-Sourced Drug and Research Center for Drug Industrial Technology, West China School of Pharmacy, Sichuan University, Chengdu 610041, China
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46
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Nett AJ, Cañellas S, Higuchi Y, Robo MT, Kochkodan JM, Haynes MT, Kampf JW, Montgomery J. Stable, Well-Defined Nickel(0) Catalysts for Catalytic C-C and C-N Bond Formation. ACS Catal 2018; 8:6606-6611. [PMID: 30079273 PMCID: PMC6071431 DOI: 10.1021/acscatal.8b02187] [Citation(s) in RCA: 37] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
Abstract
The synthesis and catalytic activity of several classes of NHC-Ni(0) pre-catalysts stabilized by electron-withdrawing alkenes are described. Variations in the structure of fumarate and acrylate ligands modulate the reactivity and stability of the NHC-Ni(0) pre-catalysts and lead to practical and versatile catalysts for a variety of transformations. The catalytic activity and efficiency of representative members of this class of catalysts have been evaluated in reductive couplings of aldehydes and alkynes and in N-arylations of aryl chlorides.
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Affiliation(s)
- Alex J. Nett
- Department of Chemistry, University of Michigan, 930 North University Avenue, Ann Arbor, MI 48019-1055, United States
| | | | - Yuki Higuchi
- Department of Chemistry, University of Michigan, 930 North University Avenue, Ann Arbor, MI 48019-1055, United States
| | - Michael T. Robo
- Department of Chemistry, University of Michigan, 930 North University Avenue, Ann Arbor, MI 48019-1055, United States
| | - Jeanne M. Kochkodan
- Department of Chemistry, University of Michigan, 930 North University Avenue, Ann Arbor, MI 48019-1055, United States
| | | | - Jeff W. Kampf
- Department of Chemistry, University of Michigan, 930 North University Avenue, Ann Arbor, MI 48019-1055, United States
| | - John Montgomery
- Department of Chemistry, University of Michigan, 930 North University Avenue, Ann Arbor, MI 48019-1055, United States
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47
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Ma X, Kucera R, Goethe OF, Murphy SK, Herzon SB. Directed C-H Bond Oxidation of (+)-Pleuromutilin. J Org Chem 2018; 83:6843-6892. [PMID: 29664634 DOI: 10.1021/acs.joc.8b00462] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Antibiotics derived from the diterpene fungal metabolite (+)-pleuromutilin (1) are useful agents for the treatment Gram-positive infections in humans and farm animals. Pleuromutilins elicit slow rates of resistance development and minimal cross-resistance with existing antibiotics. Despite efforts aimed at producing new derivatives by semisynthesis, modification of the tricyclic core is underexplored, in part due to a limited number of functional group handles. Herein, we report methods to selectively functionalize the methyl groups of (+)-pleuromutilin (1) by hydroxyl-directed iridium-catalyzed C-H silylation, followed by Tamao-Fleming oxidation. These reactions provided access to C16, C17, and C18 monooxidized products, as well as C15/C16 and C17/C18 dioxidized products. Four new functionalized derivatives were prepared from the protected C17 oxidation product. C6 carboxylic acid, aldehyde, and normethyl derivatives were prepared from the C16 oxidation product. Many of these sequences were executed on gram scales. The efficiency and practicality of these routes provides an easy method to rapidly interrogate structure-activity relationships that were previously beyond reach. This study will inform the design of fully synthetic approaches to novel pleuromutilins and underscores the power of the hydroxyl-directed iridium-catalyzed C-H silylation reaction.
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48
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Zhu L, Hong R. Pursuing effective Gram-negative antibiotics: The chemical synthesis of negamycin. Tetrahedron Lett 2018. [DOI: 10.1016/j.tetlet.2018.04.059] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
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49
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Morrill C, Jensen C, Just-Baringo X, Grogan G, Turner NJ, Procter DJ. Biocatalytic Conversion of Cyclic Ketones Bearing α-Quaternary Stereocenters into Lactones in an Enantioselective Radical Approach to Medium-Sized Carbocycles. Angew Chem Int Ed Engl 2018. [DOI: 10.1002/ange.201800121] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Affiliation(s)
- Charlotte Morrill
- School of Chemistry; University of Manchester; Manchester M13 9PL UK
| | - Chantel Jensen
- School of Chemistry; University of Manchester; Manchester M13 9PL UK
| | | | - Gideon Grogan
- Department of Chemistry; University of York, Heslington; York YO10 5DD UK
| | | | - David J. Procter
- School of Chemistry; University of Manchester; Manchester M13 9PL UK
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50
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Morrill C, Jensen C, Just-Baringo X, Grogan G, Turner NJ, Procter DJ. Biocatalytic Conversion of Cyclic Ketones Bearing α-Quaternary Stereocenters into Lactones in an Enantioselective Radical Approach to Medium-Sized Carbocycles. Angew Chem Int Ed Engl 2018; 57:3692-3696. [PMID: 29393988 PMCID: PMC6055628 DOI: 10.1002/anie.201800121] [Citation(s) in RCA: 30] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2018] [Indexed: 01/11/2023]
Abstract
Cyclic ketones bearing α‐quaternary stereocenters underwent efficient kinetic resolution using cyclohexanone monooxygenase (CHMO) from Acinetobacter calcoaceticus. Lactones possessing tetrasubstituted stereocenters were obtained with high enantioselectivity (up to >99 % ee) and complete chemoselectivity. Preparative‐scale biotransformations were exploited in conjunction with a SmI2‐mediated cyclization process to access complex, enantiomerically enriched cycloheptan‐ and cycloctan‐1,4‐diols. In a parallel approach to structurally distinct products, enantiomerically enriched ketones from the resolution with an α‐quaternary stereocenter were used in a SmI2‐mediated cyclization process to give cyclobutanol products (up to >99 % ee).
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Affiliation(s)
- Charlotte Morrill
- School of Chemistry, University of Manchester, Manchester, M13 9PL, UK
| | - Chantel Jensen
- School of Chemistry, University of Manchester, Manchester, M13 9PL, UK
| | | | - Gideon Grogan
- Department of Chemistry, University of York, Heslington, York, YO10 5DD, UK
| | - Nicholas J Turner
- School of Chemistry, University of Manchester, Manchester, M13 9PL, UK
| | - David J Procter
- School of Chemistry, University of Manchester, Manchester, M13 9PL, UK
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