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For: Blum G, Ott M, Lischewski A, Ritter A, Imrich H, Tschäpe H, Hacker J. Excision of large DNA regions termed pathogenicity islands from tRNA-specific loci in the chromosome of an Escherichia coli wild-type pathogen. Infect Immun 1994;62:606-14. [PMID: 7507897 PMCID: PMC186147 DOI: 10.1128/iai.62.2.606-614.1994] [Citation(s) in RCA: 284] [Impact Index Per Article: 9.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]  Open
Number Cited by Other Article(s)
1
Chetri S. Escherichia coli: An arduous voyage from commensal to Antibiotic-resistance. Microb Pathog 2025;198:107173. [PMID: 39608506 DOI: 10.1016/j.micpath.2024.107173] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2024] [Revised: 11/14/2024] [Accepted: 11/26/2024] [Indexed: 11/30/2024]
2
Zhang Z, Wang X, Li S, Fu Y, Li Y, Nawaz S, Chen J, Yang G, Li J, Shi D. Isolation of a Virulent Clostridium perfringens Strain from Elaphurus davidianus and Characterization by Whole-Genome Sequence Analysis. Curr Issues Mol Biol 2024;46:7169-7186. [PMID: 39057068 PMCID: PMC11276296 DOI: 10.3390/cimb46070427] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/18/2024] [Revised: 06/28/2024] [Accepted: 06/29/2024] [Indexed: 07/28/2024]  Open
3
Sváb D, Somogyi Z, Tóth I, Marina J, Jose SV, Jeeba J, Safna A, Juhász J, Nagy P, Abdelnassir AMT, Ismail AA, Makrai L. Molecular Markers and Antimicrobial Resistance Patterns of Extraintestinal Pathogenic Escherichia coli from Camel Calves Including Colistin-Resistant and Hypermucoviscuous Strains. Trop Med Infect Dis 2024;9:123. [PMID: 38922035 PMCID: PMC11209031 DOI: 10.3390/tropicalmed9060123] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/13/2024] [Revised: 04/06/2024] [Accepted: 04/24/2024] [Indexed: 06/27/2024]  Open
4
Moazeni S, Askari Badouei M, Hashemitabar G, Rezatofighi SE, Mahmoodi F. Detection and characterization of potentially hybrid enteroaggregative Escherichia coli (EAEC) strains isolated from urinary tract infection. Braz J Microbiol 2024;55:1-9. [PMID: 38036848 PMCID: PMC10920591 DOI: 10.1007/s42770-023-01195-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/21/2023] [Accepted: 11/21/2023] [Indexed: 12/02/2023]  Open
5
Metabolic and Morphotypic Trade-Offs within the Eco-Evolutionary Dynamics of Escherichia coli. Microbiol Spectr 2022;10:e0067822. [PMID: 36169422 PMCID: PMC9602443 DOI: 10.1128/spectrum.00678-22] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]  Open
6
Yang T, Gao F. High-quality pan-genome of Escherichia coli generated by excluding confounding and highly similar strains reveals an association between unique gene clusters and genomic islands. Brief Bioinform 2022;23:6638794. [PMID: 35809555 DOI: 10.1093/bib/bbac283] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/24/2022] [Revised: 06/17/2022] [Accepted: 06/20/2022] [Indexed: 01/24/2023]  Open
7
Li B, Chen D, Lin F, Wu C, Cao L, Chen H, Hu Y, Yin Y. Genomic Island-Mediated Horizontal Transfer of the Erythromycin Resistance Gene erm(X) among Bifidobacteria. Appl Environ Microbiol 2022;88:e0041022. [PMID: 35477272 PMCID: PMC9128502 DOI: 10.1128/aem.00410-22] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2022] [Accepted: 04/02/2022] [Indexed: 01/20/2023]  Open
8
Panunzio A, Tafuri A, Princiotta A, Gentile I, Mazzucato G, Trabacchin N, Antonelli A, Cerruto MA. Omics in urology: An overview on concepts, current status and future perspectives. Urologia 2021;88:270-279. [PMID: 34169788 DOI: 10.1177/03915603211022960] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
9
Bazin A, Gautreau G, Médigue C, Vallenet D, Calteau A. panRGP: a pangenome-based method to predict genomic islands and explore their diversity. Bioinformatics 2021;36:i651-i658. [PMID: 33381850 DOI: 10.1093/bioinformatics/btaa792] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]  Open
10
García A, Fox JG. A One Health Perspective for Defining and Deciphering Escherichia coli Pathogenic Potential in Multiple Hosts. Comp Med 2021;71:3-45. [PMID: 33419487 PMCID: PMC7898170 DOI: 10.30802/aalas-cm-20-000054] [Citation(s) in RCA: 20] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2020] [Revised: 08/17/2020] [Accepted: 09/19/2020] [Indexed: 11/05/2022]
11
Desvaux M, Dalmasso G, Beyrouthy R, Barnich N, Delmas J, Bonnet R. Pathogenicity Factors of Genomic Islands in Intestinal and Extraintestinal Escherichia coli. Front Microbiol 2020;11:2065. [PMID: 33101219 PMCID: PMC7545054 DOI: 10.3389/fmicb.2020.02065] [Citation(s) in RCA: 87] [Impact Index Per Article: 17.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/04/2020] [Accepted: 08/05/2020] [Indexed: 12/20/2022]  Open
12
Yazdanpour Z, Tadjrobehkar O, Shahkhah M. Significant association between genes encoding virulence factors with antibiotic resistance and phylogenetic groups in community acquired uropathogenic Escherichia coli isolates. BMC Microbiol 2020;20:241. [PMID: 32758126 PMCID: PMC7409443 DOI: 10.1186/s12866-020-01933-1] [Citation(s) in RCA: 36] [Impact Index Per Article: 7.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2020] [Accepted: 07/30/2020] [Indexed: 01/29/2023]  Open
13
IHF stabilizes pathogenicity island I of uropathogenic Escherichia coli strain 536 by attenuating integrase I promoter activity. Sci Rep 2020;10:9397. [PMID: 32523028 PMCID: PMC7286903 DOI: 10.1038/s41598-020-66215-2] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/11/2020] [Accepted: 05/12/2020] [Indexed: 11/19/2022]  Open
14
Abd El-Baky RM, Ibrahim RA, Mohamed DS, Ahmed EF, Hashem ZS. Prevalence of Virulence Genes and Their Association with Antimicrobial Resistance Among Pathogenic E. coli Isolated from Egyptian Patients with Different Clinical Infections. Infect Drug Resist 2020;13:1221-1236. [PMID: 32425560 PMCID: PMC7196243 DOI: 10.2147/idr.s241073] [Citation(s) in RCA: 41] [Impact Index Per Article: 8.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2019] [Accepted: 04/04/2020] [Indexed: 12/20/2022]  Open
15
Lerminiaux NA, MacKenzie KD, Cameron ADS. Salmonella Pathogenicity Island 1 (SPI-1): The Evolution and Stabilization of a Core Genomic Type Three Secretion System. Microorganisms 2020;8:microorganisms8040576. [PMID: 32316180 PMCID: PMC7232297 DOI: 10.3390/microorganisms8040576] [Citation(s) in RCA: 31] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/05/2020] [Revised: 04/10/2020] [Accepted: 04/10/2020] [Indexed: 11/16/2022]  Open
16
Rihtar E, Žgur Bertok D, Podlesek Z. The Uropathogenic Specific Protein Gene usp from Escherichia coli and Salmonella bongori is a Novel Member of the TyrR and H-NS Regulons. Microorganisms 2020;8:E330. [PMID: 32111072 PMCID: PMC7142922 DOI: 10.3390/microorganisms8030330] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2020] [Accepted: 02/25/2020] [Indexed: 12/16/2022]  Open
17
Pathogenicity island excision during an infection by Salmonella enterica serovar Enteritidis is required for crossing the intestinal epithelial barrier in mice to cause systemic infection. PLoS Pathog 2019;15:e1008152. [PMID: 31800631 PMCID: PMC6968874 DOI: 10.1371/journal.ppat.1008152] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2019] [Revised: 01/17/2020] [Accepted: 10/21/2019] [Indexed: 02/07/2023]  Open
18
Zhu D, Yang Z, Xu J, Wang M, Jia R, Chen S, Liu M, Zhao X, Yang Q, Wu Y, Zhang S, Liu Y, Zhang L, Yu Y, Chen X, Cheng A. Pan-genome analysis of Riemerella anatipestifer reveals its genomic diversity and acquired antibiotic resistance associated with genomic islands. Funct Integr Genomics 2019;20:307-320. [PMID: 31654228 DOI: 10.1007/s10142-019-00715-x] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/26/2018] [Revised: 07/20/2019] [Accepted: 09/09/2019] [Indexed: 01/09/2023]
19
Sub-Inhibitory concentrations of SOS-Response inducing antibiotics stimulate integrase expression and excision of pathogenicity islands in uropathogenic Escherichia coli strain 536. Int J Med Microbiol 2019;310:151361. [PMID: 31640923 DOI: 10.1016/j.ijmm.2019.151361] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2019] [Revised: 08/26/2019] [Accepted: 09/29/2019] [Indexed: 01/24/2023]  Open
20
Phale PS, Shah BA, Malhotra H. Variability in Assembly of Degradation Operons for Naphthalene and its derivative, Carbaryl, Suggests Mobilization through Horizontal Gene Transfer. Genes (Basel) 2019;10:genes10080569. [PMID: 31357661 PMCID: PMC6723655 DOI: 10.3390/genes10080569] [Citation(s) in RCA: 34] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2019] [Revised: 07/11/2019] [Accepted: 07/11/2019] [Indexed: 01/14/2023]  Open
21
Novick RP. Pathogenicity Islands and Their Role in Staphylococcal Biology. Microbiol Spectr 2019;7:10.1128/microbiolspec.gpp3-0062-2019. [PMID: 31172913 PMCID: PMC11257176 DOI: 10.1128/microbiolspec.gpp3-0062-2019] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2018] [Indexed: 12/20/2022]  Open
22
Zlatkov N, Uhlin BE. Absence of Global Stress Regulation in Escherichia coli Promotes Pathoadaptation and Novel c-di-GMP-dependent Metabolic Capability. Sci Rep 2019;9:2600. [PMID: 30796316 PMCID: PMC6385356 DOI: 10.1038/s41598-019-39580-w] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/05/2018] [Accepted: 01/25/2019] [Indexed: 01/17/2023]  Open
23
Saile N, Schuh E, Semmler T, Eichhorn I, Wieler LH, Bauwens A, Schmidt H. Determination of virulence and fitness genes associated with the pheU, pheV and selC integration sites of LEE-negative food-borne Shiga toxin-producing Escherichia coli strains. Gut Pathog 2018;10:43. [PMID: 30337962 PMCID: PMC6174562 DOI: 10.1186/s13099-018-0271-8] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 07/10/2018] [Accepted: 10/01/2018] [Indexed: 01/22/2023]  Open
24
Chen Z, Cheng H, Pan W, Zheng J, Li D, Lin F, Yu Z, Deng Q. Comparative genome and evolution analysis of the locus of enterocyte effacement from enteropathogenic Escherichia coli Deng and its transcriptional response to ciprofloxacin. J Med Microbiol 2018;67:1368-1382. [PMID: 29989530 DOI: 10.1099/jmm.0.000790] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
25
Vila J, Sáez-López E, Johnson JR, Römling U, Dobrindt U, Cantón R, Giske CG, Naas T, Carattoli A, Martínez-Medina M, Bosch J, Retamar P, Rodríguez-Baño J, Baquero F, Soto SM. Escherichia coli: an old friend with new tidings. FEMS Microbiol Rev 2018;40:437-463. [PMID: 28201713 DOI: 10.1093/femsre/fuw005] [Citation(s) in RCA: 200] [Impact Index Per Article: 28.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Revised: 09/23/2015] [Accepted: 02/04/2016] [Indexed: 12/16/2022]  Open
26
Comparative Genomic Analysis of Globally Dominant ST131 Clone with Other Epidemiologically Successful Extraintestinal Pathogenic Escherichia coli (ExPEC) Lineages. mBio 2017;8:mBio.01596-17. [PMID: 29066550 PMCID: PMC5654935 DOI: 10.1128/mbio.01596-17] [Citation(s) in RCA: 77] [Impact Index Per Article: 9.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]  Open
27
'Omic' Approaches to Study Uropathogenic Escherichia coli Virulence. Trends Microbiol 2017;25:729-740. [PMID: 28550944 DOI: 10.1016/j.tim.2017.04.006] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2017] [Revised: 04/10/2017] [Accepted: 04/21/2017] [Indexed: 01/21/2023]
28
Nieto PA, Pardo-Roa C, Salazar-Echegarai FJ, Tobar HE, Coronado-Arrázola I, Riedel CA, Kalergis AM, Bueno SM. New insights about excisable pathogenicity islands in Salmonella and their contribution to virulence. Microbes Infect 2016;18:302-9. [DOI: 10.1016/j.micinf.2016.02.001] [Citation(s) in RCA: 29] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/25/2015] [Revised: 02/05/2016] [Accepted: 02/09/2016] [Indexed: 12/15/2022]
29
Yousuf FA, Rafiq S, Siddiqui R, Khan NA. The role of genomic islands in Escherichia coli K1 interactions with intestinal and kidney epithelial cells. Microb Pathog 2016;93:145-51. [PMID: 26867478 DOI: 10.1016/j.micpath.2016.02.002] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/02/2015] [Revised: 02/01/2016] [Accepted: 02/01/2016] [Indexed: 10/22/2022]
30
Novick RP, Ram G. The Floating (Pathogenicity) Island: A Genomic Dessert. Trends Genet 2016;32:114-126. [PMID: 26744223 PMCID: PMC4733582 DOI: 10.1016/j.tig.2015.11.005] [Citation(s) in RCA: 40] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2015] [Revised: 11/17/2015] [Accepted: 11/30/2015] [Indexed: 12/30/2022]
31
Virulence Gene Regulation in Escherichia coli. EcoSal Plus 2015;2. [PMID: 26443571 DOI: 10.1128/ecosalplus.8.9.1] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
32
Kittichotirat W, Bumgarner RE, Chen C. Evolutionary Divergence of Aggregatibacter actinomycetemcomitans. J Dent Res 2015;95:94-101. [PMID: 26420795 DOI: 10.1177/0022034515608163] [Citation(s) in RCA: 44] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]  Open
33
Vanga BR, Ramakrishnan P, Butler RC, Toth IK, Ronson CW, Jacobs JME, Pitman AR. Mobilization of horizontally acquired island 2 is induced in planta in the phytopathogen Pectobacterium atrosepticum SCRI1043 and involves the putative relaxase ECA0613 and quorum sensing. Environ Microbiol 2015;17:4730-44. [PMID: 26271942 DOI: 10.1111/1462-2920.13024] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/25/2015] [Revised: 08/11/2015] [Accepted: 08/12/2015] [Indexed: 01/30/2023]
34
Paniagua-Contreras GL, Monroy-Pérez E, Rodríguez-Moctezuma JR, Domínguez-Trejo P, Vaca-Paniagua F, Vaca S. Virulence factors, antibiotic resistance phenotypes and O-serogroups of Escherichia coli strains isolated from community-acquired urinary tract infection patients in Mexico. JOURNAL OF MICROBIOLOGY, IMMUNOLOGY, AND INFECTION = WEI MIAN YU GAN RAN ZA ZHI 2015;50:478-485. [PMID: 26433755 DOI: 10.1016/j.jmii.2015.08.005] [Citation(s) in RCA: 56] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/15/2015] [Revised: 06/24/2015] [Accepted: 08/31/2015] [Indexed: 11/30/2022]
35
A role for Tn6029 in the evolution of the complex antibiotic resistance gene loci in genomic island 3 in enteroaggregative hemorrhagic Escherichia coli O104:H4. PLoS One 2015;10:e0115781. [PMID: 25675217 PMCID: PMC4326458 DOI: 10.1371/journal.pone.0115781] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/22/2014] [Accepted: 12/01/2014] [Indexed: 12/25/2022]  Open
36
Impact of UV and peracetic acid disinfection on the prevalence of virulence and antimicrobial resistance genes in uropathogenic Escherichia coli in wastewater effluents. Appl Environ Microbiol 2015;80:3656-66. [PMID: 24727265 DOI: 10.1128/aem.00418-14] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]  Open
37
Boyd EF, Carpenter MR, Chowdhury N. Mobile effector proteins on phage genomes. BACTERIOPHAGE 2014;2:139-148. [PMID: 23275865 PMCID: PMC3530523 DOI: 10.4161/bact.21658] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
38
Alghoribi MF, Gibreel TM, Dodgson AR, Beatson SA, Upton M. Galleria mellonella infection model demonstrates high lethality of ST69 and ST127 uropathogenic E. coli. PLoS One 2014;9:e101547. [PMID: 25061819 PMCID: PMC4111486 DOI: 10.1371/journal.pone.0101547] [Citation(s) in RCA: 50] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/13/2014] [Accepted: 06/09/2014] [Indexed: 01/09/2023]  Open
39
Rivas AJ, Labella AM, Borrego JJ, Lemos ML, Osorio CR. Evidence for horizontal gene transfer, gene duplication and genetic variation as driving forces of the diversity of haemolytic phenotypes in Photobacterium damselae subsp. damselae. FEMS Microbiol Lett 2014;355:152-62. [PMID: 24813762 DOI: 10.1111/1574-6968.12464] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/21/2014] [Revised: 05/06/2014] [Accepted: 05/06/2014] [Indexed: 12/01/2022]  Open
40
Ecology, diversity, and evolution of magnetotactic bacteria. Microbiol Mol Biol Rev 2014;77:497-526. [PMID: 24006473 DOI: 10.1128/mmbr.00021-13] [Citation(s) in RCA: 238] [Impact Index Per Article: 21.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]  Open
41
Identifying pathogenicity islands in bacterial pathogenomics using computational approaches. Pathogens 2014;3:36-56. [PMID: 25437607 PMCID: PMC4235732 DOI: 10.3390/pathogens3010036] [Citation(s) in RCA: 42] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2013] [Revised: 12/30/2013] [Accepted: 01/07/2014] [Indexed: 12/22/2022]  Open
42
Pacchiani N, Censini S, Buti L, Covacci A. Echoes of a distant past: The cag pathogenicity island of Helicobacter pylori. Cold Spring Harb Perspect Med 2013;3:cshperspect.a010355. [PMID: 24097901 DOI: 10.1101/cshperspect.a010355] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
43
Mateus L, Henriques S, Merino C, Pomba C, Lopes da Costa L, Silva E. Virulence genotypes of Escherichia coli canine isolates from pyometra, cystitis and fecal origin. Vet Microbiol 2013;166:590-4. [DOI: 10.1016/j.vetmic.2013.07.018] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/04/2013] [Revised: 07/12/2013] [Accepted: 07/13/2013] [Indexed: 11/30/2022]
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Richards VP, Zadoks RN, Pavinski Bitar PD, Lefébure T, Lang P, Werner B, Tikofsky L, Moroni P, Stanhope MJ. Genome characterization and population genetic structure of the zoonotic pathogen, Streptococcus canis. BMC Microbiol 2012;12:293. [PMID: 23244770 PMCID: PMC3541175 DOI: 10.1186/1471-2180-12-293] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2012] [Accepted: 12/06/2012] [Indexed: 11/18/2022]  Open
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Bobay LM, Rocha EPC, Touchon M. The adaptation of temperate bacteriophages to their host genomes. Mol Biol Evol 2012;30:737-51. [PMID: 23243039 PMCID: PMC3603311 DOI: 10.1093/molbev/mss279] [Citation(s) in RCA: 147] [Impact Index Per Article: 11.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]  Open
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Dutta C, Paul S. Microbial lifestyle and genome signatures. Curr Genomics 2012;13:153-62. [PMID: 23024607 PMCID: PMC3308326 DOI: 10.2174/138920212799860698] [Citation(s) in RCA: 55] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/18/2011] [Revised: 09/13/2011] [Accepted: 09/28/2011] [Indexed: 12/29/2022]  Open
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Prediction of genomic islands in three bacterial pathogens of pneumonia. Int J Mol Sci 2012;13:3134-3144. [PMID: 22489145 PMCID: PMC3317706 DOI: 10.3390/ijms13033134] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2012] [Revised: 02/20/2012] [Accepted: 03/01/2012] [Indexed: 11/23/2022]  Open
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Soares SC, Abreu VAC, Ramos RTJ, Cerdeira L, Silva A, Baumbach J, Trost E, Tauch A, Hirata R, Mattos-Guaraldi AL, Miyoshi A, Azevedo V. PIPS: pathogenicity island prediction software. PLoS One 2012;7:e30848. [PMID: 22355329 PMCID: PMC3280268 DOI: 10.1371/journal.pone.0030848] [Citation(s) in RCA: 50] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2011] [Accepted: 12/22/2011] [Indexed: 01/08/2023]  Open
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Da Silva GJ, Mendonça N. Association between antimicrobial resistance and virulence in Escherichia coli. Virulence 2012;3:18-28. [PMID: 22286707 DOI: 10.4161/viru.3.1.18382] [Citation(s) in RCA: 130] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]  Open
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Zhang C, Anderson AJ. Polycyclic aromatic hydrocarbon degrading gene islands in five pyrene-degrading Mycobacterium isolates from different geographic locations. Can J Microbiol 2011;58:102-11. [PMID: 22188370 DOI: 10.1139/w11-093] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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