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Sakurai A, Takahashi S, Mochizuki T, Sugimoto T. Tip-Enhanced Sum Frequency Generation for Molecular Vibrational Nanospectroscopy. NANO LETTERS 2025; 25:6390-6398. [PMID: 40210593 PMCID: PMC12023042 DOI: 10.1021/acs.nanolett.4c06065] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/27/2024] [Revised: 04/07/2025] [Accepted: 04/08/2025] [Indexed: 04/12/2025]
Abstract
Vibrational sum frequency generation (SFG) is a nonlinear spectroscopic technique widely used to study the molecular structure and dynamics of surface systems. However, the spatial resolution achieved by far-field observations is constrained by the diffraction limit, obscuring molecular details in inhomogeneous structures smaller than the wavelength of light. To overcome this limitation, we developed a system for tip-enhanced SFG (TE-SFG) spectroscopy based on a scanning tunneling microscope. We successfully detected vibrational TE-SFG signals from adsorbed molecules on a gold substrate under ambient conditions. The phase analysis of interferometric SFG spectra provided information on molecular orientation. Furthermore, the observed TE-SFG signal was confirmed to originate from a highly localized region within a gap between the tip apex and the sample substrate. This method offers a novel platform for nonlinear optical nanospectroscopy, paving the way for the investigation of surface molecular systems beyond the diffraction limit.
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Affiliation(s)
- Atsunori Sakurai
- Institute
for Molecular Science, National Institutes
of Natural Sciences, Okazaki, Aichi 444-8585, Japan
- Graduate
Institute for Advanced Studies, SOKENDAI, Okazaki, Aichi 444-8585, Japan
- Laser-Driven
Electron-Acceleration Technology Group, RIKEN SPring-8 Center, Sayocho, Hyogo 679-5148, Japan
| | - Shota Takahashi
- Institute
for Molecular Science, National Institutes
of Natural Sciences, Okazaki, Aichi 444-8585, Japan
| | - Tatsuto Mochizuki
- Institute
for Molecular Science, National Institutes
of Natural Sciences, Okazaki, Aichi 444-8585, Japan
- Graduate
Institute for Advanced Studies, SOKENDAI, Okazaki, Aichi 444-8585, Japan
| | - Toshiki Sugimoto
- Institute
for Molecular Science, National Institutes
of Natural Sciences, Okazaki, Aichi 444-8585, Japan
- Graduate
Institute for Advanced Studies, SOKENDAI, Okazaki, Aichi 444-8585, Japan
- Laser-Driven
Electron-Acceleration Technology Group, RIKEN SPring-8 Center, Sayocho, Hyogo 679-5148, Japan
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2
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Speelman R, Marker EJ, Boamah MD, Kupferberg J, Bye JZ, Engelhard M, Zhao Y, Martinson ABF, Rosso KM, Geiger FM. Water flipping and the oxygen evolution reaction on Fe 2O 3 nanolayers. Nat Commun 2025; 16:3585. [PMID: 40234436 PMCID: PMC12000574 DOI: 10.1038/s41467-025-58842-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2024] [Accepted: 04/02/2025] [Indexed: 04/17/2025] Open
Abstract
Hematite photoanodes are promising for the oxygen evolution reaction, however, their high overpotential (0.5-0.6 V) for water oxidation and limited photocurrent make them economically unviable at present. The work needed to orient dipoles at an electrode surface may be an overlooked contribution to the overpotential, especially regarding dipoles of water, the electron source in the oxygen evolution reaction (OER). Here, we employ second harmonic amplitude and phase measurements to quantify the number of net-aligned Stern layer water molecules and the work associated with water flipping, on hematite, an earth abundant OER semiconductor associated with a high overpotential. At zero applied bias, the pH-dependent potentials for Stern layer water molecule flipping exhibit Nernstian behavior. At positive applied potentials and pH 13, approximately one to two monolayers of water molecules points the oxygen atoms towards the electrode, favorable for the OER. The work associated with water flipping matches the cohesive energy of liquid water (44 kJ mol-1) and the OER current density is highest. This current is negligible at pH 5, where the work approaches 100 kJ mol-1. Our findings suggest a causal relationship between the need for Stern layer water flipping and the OER overpotential, which may lead to developing strategies for decreasing the latter.
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Affiliation(s)
- Raiden Speelman
- Department of Chemistry, Northwestern University, Evanston, IL, USA
| | - Ezra J Marker
- Department of Chemistry, Northwestern University, Evanston, IL, USA
| | - Mavis D Boamah
- Pacific Northwest National Laboratory, Richland, WA, USA
| | - Jacob Kupferberg
- Materials Science Division, Argonne National Laboratory, Lemont, IL, USA
| | - Justin Z Bye
- Department of Chemistry, Northwestern University, Evanston, IL, USA
| | - Mark Engelhard
- Pacific Northwest National Laboratory, Richland, WA, USA
| | - Yatong Zhao
- Pacific Northwest National Laboratory, Richland, WA, USA
| | - Alex B F Martinson
- Materials Science Division, Argonne National Laboratory, Lemont, IL, USA
| | - Kevin M Rosso
- Pacific Northwest National Laboratory, Richland, WA, USA
| | - Franz M Geiger
- Department of Chemistry, Northwestern University, Evanston, IL, USA.
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3
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Lee J, Ryu J, Choi J, Chae I, Kim SH. Vibrational Sum Frequency Generation Spectroscopy Study of Nanoscale to Mesoscale Polarity and Orientation of Crystalline Biopolymers in Natural Materials. Annu Rev Phys Chem 2025; 76:405-430. [PMID: 39971375 DOI: 10.1146/annurev-physchem-082423-125535] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/21/2025]
Abstract
As a nonlinear optical process, sum frequency generation (SFG) requires noncentrosymmetry across multiple length scales, ranging from individual molecular functional groups to their arrangements in space. This principle makes SFG not only intrinsically sensitive to molecular species at surfaces but also useful for studying 3D structures of crystalline biopolymers in natural materials. Examples of such biopolymers are cellulose, starch, and chitin in the polysaccharide family and collagen, silk, and keratin in the fibrous protein family. These biopolymers are noncentrosymmetric at multiple length scales, with chirality at the molecular scale, unit cell structure at the nanoscale, and crystallite orientation and polarity at the mesoscale; thus, they are SFG active. In this review, we describe how SFG can be used to determine nano- to mesoscale polarity and orientational orders of crystalline biopolymers interspersed in natural materials containing the same or similar biopolymers in amorphous states, which cannot be obtained with other characterization methods.
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Affiliation(s)
- Jongcheol Lee
- Department of Chemical Engineering and Materials Research Institute, Pennsylvania State University, University Park, Pennsylvania, USA;
| | - Jihyeong Ryu
- Department of Chemical Engineering and Materials Research Institute, Pennsylvania State University, University Park, Pennsylvania, USA;
| | - Juseok Choi
- Department of Chemical Engineering and Materials Research Institute, Pennsylvania State University, University Park, Pennsylvania, USA;
| | - Inseok Chae
- Department of Bioengineering, University of California, Berkeley, California, USA
| | - Seong H Kim
- Department of Chemical Engineering and Materials Research Institute, Pennsylvania State University, University Park, Pennsylvania, USA;
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4
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Judd KD, Parsons SW, Majumder T, Dawlaty JM. Electrostatics, Hydration, and Chemical Equilibria at Charged Monolayers on Water. Chem Rev 2025; 125:2440-2473. [PMID: 39933097 DOI: 10.1021/acs.chemrev.4c00676] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/13/2025]
Abstract
The chemistry and physics of soft matter interfaces, especially aqueous-organic interfaces, are centrally important to many areas of science and technology. Often, the thermodynamics, kinetics, and selectivity of reactions are modified at interfaces. Here, we review the electrostatics and hydration at charged monolayers on water and their influence on interfacial chemical equilibria. First, we provide an understanding of interfaces as a conceptual continuation of the solvation shell of small molecules, along with recent relevant experimental work. Then, we provide a summary of models for describing the electrostatics of aqueous interfaces. While we will discuss a range of new developments, our focus will be on systems where the electrostatics of the surface is controllable by the choice of relatively simple insoluble surfactants. New insights into the molecular structure of the double layer, with particular attention on the knowledge gained from spectroscopy will be reviewed. Our approach is to familiarize the reader with simple models, followed by discussion of models with further complexity for explaining interfacial phenomena. Experiments that test the limits of such models will also be discussed. Finally, we will provide an outlook on engineering the interfacial environment for tailored reactivity, along with the anticipated experimental advancements and potentials impacts.
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Affiliation(s)
- Kenneth D Judd
- Department of Chemistry, The University of Southern California, Los Angeles, California 90089, United States
| | - Sean W Parsons
- Department of Chemistry, The University of Southern California, Los Angeles, California 90089, United States
| | - Tirthick Majumder
- Department of Chemistry, The University of Southern California, Los Angeles, California 90089, United States
| | - Jahan M Dawlaty
- Department of Chemistry, The University of Southern California, Los Angeles, California 90089, United States
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5
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Chandra A, Malik R, Chandra A. Behavior of water at lipid/water interfaces upon phase transition of the lipid bilayer: Insights from 1D- and 2D-vibrational sum frequency generation spectral calculations from molecular dynamics simulations. J Chem Phys 2025; 162:054702. [PMID: 39898570 DOI: 10.1063/5.0247533] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/07/2024] [Accepted: 01/09/2025] [Indexed: 02/04/2025] Open
Abstract
We have investigated the structural and dynamical changes of the interfacial water near [1,2-dimyristoyl-sn-glycero-3-phosphatidylcholine] (DMPC) lipid bilayer across various temperatures, ranging from 285 K (gel phase of lipid) to 320 K (liquid phase of lipid), through calculations of one-dimensional (1D) and two-dimensional (2D) vibrational sum frequency generation (VSFG) spectra from molecular dynamics simulations. The 1D-VSFG spectra show a broad positive peak in the hydrogen-bonded region, which means that water molecules are oriented upward toward the lipid bilayer. Although DMPC is a zwitterionic lipid, the negatively charged phosphate group primarily influences the orientation of the water molecules. The absence of a dangling peak in the 1D- and 2D-VSFG spectra shows that the water molecules form hydrogen bonds with the lipid headgroup atoms. The spectral diffusion timescales obtained from the 2D-VSFG metrics of the slope of the nodal line clearly reveal a dynamical crossover and exhibit Arrhenius behavior with different activation energies before and after the melting of the lipid bilayer. Apart from 2D-VSFG, the frequency fluctuation time correlation function also exhibits a dynamical crossover upon melting of the lipid bilayer.
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Affiliation(s)
- Abhilash Chandra
- Department of Chemistry, Indian Institute of Technology Kanpur, Kanpur, Uttar Pradesh 208016, India
| | - Ravi Malik
- Department of Chemistry, Indian Institute of Technology Kanpur, Kanpur, Uttar Pradesh 208016, India
| | - Amalendu Chandra
- Department of Chemistry, Indian Institute of Technology Kanpur, Kanpur, Uttar Pradesh 208016, India
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6
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Yamamoto YI, Hirano T, Ishiyama T, Morita A, Suzuki T. Gas-Liquid Interface of Aqueous Solutions of Surface Active Aromatic Molecules Studied Using Extreme Ultraviolet Laser Photoelectron Spectroscopy and Molecular Dynamics Simulation. J Am Chem Soc 2025; 147:4026-4037. [PMID: 39838608 DOI: 10.1021/jacs.4c12310] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2025]
Abstract
We investigated the gas-liquid interface of aqueous solutions containing phenol and related aromatic compounds using extreme ultraviolet laser photoelectron spectroscopy and molecular dynamics simulations. The interfacial densities of protonated and deprotonated forms of phenol, aniline, and 4-nitrophenol were found to be primarily determined by their surface affinities and exhibit similar concentration dependences to their respective bulk densities. Despite the distinct interfacial orientations of their permanent dipole moments, these compounds monotonically decreased the surface potential at higher concentrations. The exception was sodium phenolate, whose surface potential first increased and then decreased with increasing concentration. This behavior is attributed to the opposing effects of the electric double layer formed by Na+ and phenolate ions at the gas-liquid interface and the induced electronic polarization of phenolate.
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Affiliation(s)
- Yo-Ichi Yamamoto
- Department of Chemistry, Graduate School of Science, Kyoto University, Kitashirakawa-Oiwakecho, Sakyo-ku, Kyoto 606-8502, Japan
| | - Tomonori Hirano
- Department of Chemistry, Graduate School of Science, Tohoku University, Sendai 980-8578, Japan
| | - Tatsuya Ishiyama
- Department of Applied Chemistry, Graduate School of Science and Engineering, University of Toyama, Toyama 930-8555, Japan
| | - Akihiro Morita
- Department of Chemistry, Graduate School of Science, Tohoku University, Sendai 980-8578, Japan
| | - Toshinori Suzuki
- Department of Chemistry, Graduate School of Science, Kyoto University, Kitashirakawa-Oiwakecho, Sakyo-ku, Kyoto 606-8502, Japan
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7
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Kinoshita E, Sung W, Nihonyanagi S, Okuyama H, Tahara T. Frequency-Dependent Vibrational Relaxation Time of OH Stretch at the Air/Isotopically Diluted Water Interface. J Phys Chem Lett 2025; 16:1088-1094. [PMID: 39842787 PMCID: PMC11789769 DOI: 10.1021/acs.jpclett.4c03223] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/07/2024] [Revised: 12/20/2024] [Accepted: 12/26/2024] [Indexed: 01/24/2025]
Abstract
Elucidation of the vibrational relaxation process of interfacial water is indispensable for understanding energy dissipation at the aqueous interface. In this study, the vibrational relaxation dynamics of the hydrogen-bonded OH (HB OH) stretch vibration was investigated at the air/isotopically diluted water (HOD-D2O) interface by time-resolved heterodyne-detected vibrational sum frequency generation (TR-HD-VSFG) spectroscopy. We observed the temporal change of the excited-state band (v = 1 → 2 transition), which enables a reliable determination of the T1 time of interfacial water. The T1 times obtained for the HB OH stretch with various pump frequencies are 0.14 ± 0.15 ps (3200 cm-1), 0.27 ± 0.05 ps (3300 cm-1), 0.34 ± 0.03 ps (3400 cm-1), and 0.63 ± 0.04 ps (3500 cm-1), indicating that T1 is comparable with the value at the air/H2O interface at the low-frequency side but is markedly longer at the high-frequency side. The observed frequency-dependent T1 time can be rationalized in terms of the frequency mismatch between the HB OH stretch and the bending overtone in HOD-D2O, supporting the conclusion that vibrational relaxation through the Fermi resonance with the bending overtone is the predominant mechanism of the vibrational relaxation of the HB OH stretch at the air/water interface.
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Affiliation(s)
- Erika Kinoshita
- Molecular
Spectroscopy Laboratory, RIKEN, 2-1 Hirosawa, Wako 351-0198, Japan
- Department
of Chemistry, Graduate School of Science, Kyoto University, Kyoto 606-8502, Japan
| | - Woongmo Sung
- Molecular
Spectroscopy Laboratory, RIKEN, 2-1 Hirosawa, Wako 351-0198, Japan
| | - Satoshi Nihonyanagi
- Molecular
Spectroscopy Laboratory, RIKEN, 2-1 Hirosawa, Wako 351-0198, Japan
- Ultrafast
Spectroscopy Research Team, RIKEN Center
for Advanced Photonics (RAP), 2-1 Hirosawa, Wako 351-0198, Japan
| | - Hiroshi Okuyama
- Department
of Chemistry, Graduate School of Science, Kyoto University, Kyoto 606-8502, Japan
| | - Tahei Tahara
- Molecular
Spectroscopy Laboratory, RIKEN, 2-1 Hirosawa, Wako 351-0198, Japan
- Ultrafast
Spectroscopy Research Team, RIKEN Center
for Advanced Photonics (RAP), 2-1 Hirosawa, Wako 351-0198, Japan
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8
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Hirose M, Ishiyama T. Orientational Disorder of Alcohol Molecules at Their Solution Surfaces in Low Concentration Range: A Molecular Dynamics Simulation Study. J Phys Chem B 2024; 128:11450-11459. [PMID: 39505829 DOI: 10.1021/acs.jpcb.4c04611] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2024]
Abstract
Molecular dynamics (MD) simulations of short-chain alcohols (methanol, ethanol, and 1-propanol) in solution were carried out to examine the orientational disordering (randomizing) of alcohol molecules at the surface under diluted conditions. Recent vibrational sum frequency generation (VSFG) spectroscopy, combined with photoelectron spectroscopy, has successfully measured the disordering structure at low concentrations. The present MD simulations accurately reproduce this observation for the first time. To ensure reliable results through MD simulations, several widely used force field models for water and alcohol, including polarizable models, were examined. This examination involved a comparison of structural and thermodynamic quantities, such as surface density times orientation and surface excess concentration, which were obtained through surface-specific measurements like VSFG spectroscopy and surface tension measurements. It is found that the width of the density profile for alcohol molecules at the surface, along the surface normal, increases as the concentration decreases in the diluted condition, which is consistent with the results obtained from the previous neutron and X-ray grazing incidence reflection experiments. A molecular mechanism explaining the disordering of alcohol molecules with decreasing concentration is also discussed.
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Affiliation(s)
- Mayu Hirose
- Department of Applied Chemistry, Graduate School of Science and Engineering, University of Toyama, Toyama 930-8555, Japan
| | - Tatsuya Ishiyama
- Department of Applied Chemistry, Graduate School of Science and Engineering, University of Toyama, Toyama 930-8555, Japan
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9
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Kumar N, Bilsky J, Clark AE. Isotropic ↔ anisotropic surface geometry transitions induced by adsorbed surfactants at water/vapor interfaces. J Chem Phys 2024; 161:184712. [PMID: 39540449 DOI: 10.1063/5.0237563] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2024] [Accepted: 10/23/2024] [Indexed: 11/16/2024] Open
Abstract
Adsorbates at a water/vapor interface change the surface geometry through altered surface tension, yet detailed theoretical studies are relatively sparse, and many applications focus on ensemble average characteristics. Here, we demonstrate that different interpretations of surface geometry emerge when considering the distributions of surface curvature and orientation as a function of adsorbed surfactant concentration and sterics. At low surface densities, the tributyl phosphate (TBP) sorbed water/vapor surface has an increased presence of ridges that are defined by principal curvatures κ1 and κ2 of opposite signs yet close in magnitude. As the TBP surface density increases, the difference in principal curvatures slowly increases. There is a distinct transition of the surface geometry, where the ridge-like features become much more pronounced, having sides whose orientation is normal to a flat interfacial plane. Thus, as the TBP surfactant is added to the surface, the surface curvatures become anisotropic in terms of the difference in magnitude of κ1 and κ2. We label this an isotropic → anisotropic geometric transition. Comparing the surface geometry as a function of the carbon tail length of the alkyl phosphate surfactant reveals that smaller surfactants also anisotropically enhance surface curvatures and that adsorbed alkyl tails to the surface stabilize and increase the symmetry of surface waves along the two principal curvature axes. We label this an anisotropic → isotropic geometric transition. These results reflect the opportunity to incorporate more realistic distributions of surface geometry within the collective understanding of statistical theories of surfaces, including capillary wave theory.
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Affiliation(s)
- Nitesh Kumar
- Department of Chemistry, University of Utah, Salt Lake City, Utah 84112, USA
| | - Joshua Bilsky
- Department of Chemistry, University of Utah, Salt Lake City, Utah 84112, USA
| | - Aurora E Clark
- Department of Chemistry, University of Utah, Salt Lake City, Utah 84112, USA
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10
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Roy S, Ahmed M, Nihonyanagi S, Tahara T. Time-resolved heterodyne-detected electronic sum frequency generation (TR-HD-ESFG) spectroscopy: A new approach to explore interfacial dynamics. J Chem Phys 2024; 161:174202. [PMID: 39494797 DOI: 10.1063/5.0235176] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/26/2024] [Accepted: 10/17/2024] [Indexed: 11/05/2024] Open
Abstract
Aqueous interfaces containing organic/inorganic molecules are important in various biological, industrial, and atmospheric processes. So far, the study on the dynamics of interfacial molecules has been carried out with time-resolved vibrational sum-frequency generation (TR-VSFG) and time-resolved electronic sum-frequency generation (TR-ESFG) techniques. Although the ESFG probe is powerful for investigating interfacial photochemical dynamics of solute molecules by monitoring the electronic transition of transients or photoproducts at the interface, heterodyne detection is highly desirable for obtaining straightforward information, particularly in time-resolved measurements. So far, heterodyne detection has been realized only for TR-VSFG measurements but not for TR-ESFG measurements. In this paper, we report on femtosecond time-resolved heterodyne-detected ESFG (TR-HD-ESFG) spectroscopy for the first time. With TR-HD-ESFG developed, we measured the time-resolved electronic ΔImχ(2) spectra (pump-induced changes in the imaginary part of the second-order susceptibility) of a prototype dye, malachite green (MG), at the air/water interface. The obtained ΔImχ(2) spectra clearly show not only the ground-state bleach but also the excited-state band of MG at the air/water interface, demonstrating the high potential of TR-HD-ESFG as a new powerful tool to investigate ultrafast reaction dynamics at the interface.
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Affiliation(s)
- Subhadip Roy
- Molecular Spectroscopy Laboratory, RIKEN, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan
| | - Mohammed Ahmed
- Molecular Spectroscopy Laboratory, RIKEN, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan
- Ultrafast Spectroscopy Research Team, RIKEN Centre for Advanced Photonics (RAP), 2-1 Hirosawa, Wako, Saitama 351-0198, Japan
| | - Satoshi Nihonyanagi
- Molecular Spectroscopy Laboratory, RIKEN, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan
- Ultrafast Spectroscopy Research Team, RIKEN Centre for Advanced Photonics (RAP), 2-1 Hirosawa, Wako, Saitama 351-0198, Japan
| | - Tahei Tahara
- Molecular Spectroscopy Laboratory, RIKEN, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan
- Ultrafast Spectroscopy Research Team, RIKEN Centre for Advanced Photonics (RAP), 2-1 Hirosawa, Wako, Saitama 351-0198, Japan
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11
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Pritchard FG, Jordan CJC, Verlet JRR. Probing photochemical dynamics using electronic vs vibrational sum-frequency spectroscopy: The case of the hydrated electron at the water/air interface. J Chem Phys 2024; 161:170901. [PMID: 39484892 DOI: 10.1063/5.0235875] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2024] [Accepted: 10/15/2024] [Indexed: 11/03/2024] Open
Abstract
Photo-dynamics can proceed differently at the water/air interface compared to in the respective bulk phases. Second-order non-linear spectroscopy is capable of selectively probing the dynamics of species in such an environment. However, certain conclusions drawn from vibrational and electronic sum-frequency generation spectroscopies do not agree as is the case for the formation and structure of hydrated electrons at the interface. This Perspective aims to highlight these apparent discrepancies, how they can be reconciled, suggests how the two techniques complement one another, and outline the value of performing both techniques on the same system.
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Affiliation(s)
- Faith G Pritchard
- Department of Chemistry, Durham University, Durham DH1 3LE, United Kingdom
| | - Caleb J C Jordan
- Department of Chemistry, Durham University, Durham DH1 3LE, United Kingdom
| | - Jan R R Verlet
- Department of Chemistry, Durham University, Durham DH1 3LE, United Kingdom
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12
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Inoue KI, Yamamoto T, Hatori Y, Hiraide T, Ye S. Hydrolysis of phospholipid monolayers by phospholipase A2 revealed by heterodyne-detected sum frequency generation (HD-SFG) spectroscopy. J Chem Phys 2024; 161:154704. [PMID: 39404221 DOI: 10.1063/5.0231282] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2024] [Accepted: 09/27/2024] [Indexed: 10/25/2024] Open
Abstract
Phospholipase A2 (PLA2) catalyzes the hydrolysis of the sn-2 acyl ester linkage in phospholipid, producing lysophospholipid and fatty acid in the presence of Ca2+. The hydrolysis mediated by PLA2 has attracted much interest in various fields, such as pharmacy and biotechnology. It is recognized that PLA2 cannot hydrolyze phospholipid monolayers at high surface coverage. However, the origin of different PLA2 activities is not fully understood yet. The present study investigated the interaction between DPPC (16:0 PC) monolayer and PLA2 using heterodyne-detected sum frequency generation spectroscopy, which is interface-specific spectroscopy and highly sensitive to molecular symmetry based on a second-order nonlinear optical process. It was revealed that PLA2 adsorbs to the DPPC monolayer on the aqueous solution surface only when the surface coverage is low. The adsorption at the low surface coverage significantly changes the interfacial structures of PLA2 and the hydration, which are stabilized by the presence of Ca2+. Therefore, the restriction of the hydrolysis of phospholipid monolayers at high surface coverage can be rationalized by the inhabitation of the PLA2 adsorption. The present study deepens our molecular-level understanding of the hydrolysis of phospholipids by PLA2.
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Affiliation(s)
- Ken-Ichi Inoue
- Department of Chemistry, Graduate School of Science, Tohoku University, Sendai 980-8578, Japan
| | - Takashi Yamamoto
- Department of Chemistry, Graduate School of Science, Tohoku University, Sendai 980-8578, Japan
| | - Yosuke Hatori
- Department of Chemistry, Graduate School of Science, Tohoku University, Sendai 980-8578, Japan
| | - Takeru Hiraide
- Department of Chemistry, Graduate School of Science, Tohoku University, Sendai 980-8578, Japan
| | - Shen Ye
- Department of Chemistry, Graduate School of Science, Tohoku University, Sendai 980-8578, Japan
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13
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Nagatsuka N, Otsuki T, Kamibashira S, Koitaya T, Watanabe K. Water orientation on platinum surfaces controlled by step sites. J Chem Phys 2024; 161:094705. [PMID: 39225537 DOI: 10.1063/5.0221288] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2024] [Accepted: 08/07/2024] [Indexed: 09/04/2024] Open
Abstract
In this work, the adsorption structure of deuterated water on the stepped platinum surface is studied under an ultra-high vacuum by using heterodyne-detected sum-frequency generation spectroscopy. On a pristine Pt(553), D2O molecules adsorbed at the step sites act as hydrogen bond (H-bond) donors to the adjacent terrace sites. This ensures the net D-down orientation at the terrace sites away from the steps. In particular, the pre-adsorption of oxygen atoms at the step sites significantly alters the D-down configuration. The oxygen pre-adsorption leads to a spontaneous dissociation of the post-adsorbed water molecules at the step to form hydroxyl (OD) species. Since the hydroxyl at the step acts as a strong H-bond acceptor, D2O at the terrace no longer maintains the D-down configuration and adopts flat-lying configurations, significantly reducing the number of D-down molecules at the terrace. Density-functional theoretical calculations support these pictures. This work demonstrates the critical role of steps in controlling the net orientation of the interfacial water and provides an important reference for future considerations of the reactions at electrochemical interfaces.
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Affiliation(s)
- Naoki Nagatsuka
- Department of Chemistry, Graduate School of Science, Kyoto University, Kitashirakawa Oiwake-cho, Sakyo-ku, Kyoto 606-8502, Japan
| | - Takumi Otsuki
- Department of Chemistry, Graduate School of Science, Kyoto University, Kitashirakawa Oiwake-cho, Sakyo-ku, Kyoto 606-8502, Japan
| | - Shota Kamibashira
- Department of Chemistry, Graduate School of Science, Kyoto University, Kitashirakawa Oiwake-cho, Sakyo-ku, Kyoto 606-8502, Japan
| | - Takanori Koitaya
- Department of Chemistry, Graduate School of Science, Kyoto University, Kitashirakawa Oiwake-cho, Sakyo-ku, Kyoto 606-8502, Japan
| | - Kazuya Watanabe
- Department of Chemistry, Graduate School of Science, Kyoto University, Kitashirakawa Oiwake-cho, Sakyo-ku, Kyoto 606-8502, Japan
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14
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Fellows AP, Duque ÁD, Balos V, Lehmann L, Netz RR, Wolf M, Thämer M. How Thick is the Air-Water Interface?─A Direct Experimental Measurement of the Decay Length of the Interfacial Structural Anisotropy. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2024; 40:18760-18772. [PMID: 39171356 PMCID: PMC11375779 DOI: 10.1021/acs.langmuir.4c02571] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 08/23/2024]
Abstract
The air-water interface is a highly prevalent phase boundary impacting many natural and artificial processes. The significance of this interface arises from the unique properties of water molecules within the interfacial region, with a crucial parameter being the thickness of its structural anisotropy, or "healing depth". This quantity has been extensively assessed by various simulations which have converged to a prediction of a remarkably short length of ∼6 Å. Despite the absence of any direct experimental measurement of this quantity, this predicted value has surprisingly become widely accepted as fact. Using an advancement in nonlinear vibrational spectroscopy, we provide the first measurement of this thickness and, indeed, find it to be ∼6-8 Å, finally confirming the prior predictions. Lastly, by combining the experimental results with depth-dependent second-order spectra calculated from ab initio parametrized molecular dynamics simulations, which are also in excellent agreement with this experimental result, we shed light on this surprisingly short correlation length of molecular orientations at the interface.
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Affiliation(s)
- Alexander P Fellows
- Fritz-Haber-Institut der Max-Planck-Gesellschaft, Faradayweg 4-6, 14195 Berlin, Germany
| | - Álvaro Díaz Duque
- Fritz-Haber-Institut der Max-Planck-Gesellschaft, Faradayweg 4-6, 14195 Berlin, Germany
| | - Vasileios Balos
- Instituto Madrileño de Estudios Avanzados en Nanociencia (IMDEA Nanociencia), 28049 Madrid, Spain
| | - Louis Lehmann
- Department of Physics, Freie Universität Berlin, Arnimallee 14, 14195 Berlin, Germany
| | - Roland R Netz
- Department of Physics, Freie Universität Berlin, Arnimallee 14, 14195 Berlin, Germany
| | - Martin Wolf
- Fritz-Haber-Institut der Max-Planck-Gesellschaft, Faradayweg 4-6, 14195 Berlin, Germany
| | - Martin Thämer
- Fritz-Haber-Institut der Max-Planck-Gesellschaft, Faradayweg 4-6, 14195 Berlin, Germany
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15
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Cecchet F. Light on the interactions between nanoparticles and lipid membranes by interface-sensitive vibrational spectroscopy. Colloids Surf B Biointerfaces 2024; 241:114013. [PMID: 38865867 DOI: 10.1016/j.colsurfb.2024.114013] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2024] [Revised: 05/10/2024] [Accepted: 06/03/2024] [Indexed: 06/14/2024]
Abstract
Nanoparticles are produced in natural phenomena or synthesized artificially for technological applications. Their frequent contact with humans has been judged potentially harmful for health, and numerous studies are ongoing to understand the mechanisms of the toxicity of nanoparticles. At the macroscopic level, the toxicity can be established in vitro or in vivo by measuring the survival of cells. At the sub-microscopic level, scientists want to unveil the molecular mechanisms of the first interactions of nanoparticles with cells via the cell membrane, before the toxicity cascades within the whole cell. Unveiling a molecular understanding of the nanoparticle-membrane interface is a tricky challenge, because of the chemical complexity of this system and its nanosized dimensions buried within bulk macroscopic environments. In this review, we highlight how, in the last 10 years, second-order nonlinear optical (NLO) spectroscopy, and specifically vibrational sum frequency generation (SFG), has provided a new understanding of the structural, physicochemical, and dynamic properties of these biological interfaces, with molecular sensitivity. We will show how the intrinsic interfacial sensitivity of second-order NLO and the chemical information of vibrational SFG spectroscopy have revealed new knowledge of the molecular mechanisms that drive nanoparticles to interact with cell membranes, from both sides, the nanoparticles and the membrane properties.
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Affiliation(s)
- Francesca Cecchet
- Laboratory of Lasers and Spectroscopies (LLS), Namur Institute of Structured Matter (NISM) and NAmur Institute for Life Sciences (NARILIS), University of Namur (UNamur), Belgium.
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16
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Schneck E, Reed J, Seki T, Nagata Y, Kanduč M. Experimental and simulation-based characterization of surfactant adsorption layers at fluid interfaces. Adv Colloid Interface Sci 2024; 331:103237. [PMID: 38959812 DOI: 10.1016/j.cis.2024.103237] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/07/2023] [Revised: 06/10/2024] [Accepted: 06/13/2024] [Indexed: 07/05/2024]
Abstract
Adsorption of surfactants to fluid interfaces occurs in numerous technological and daily-life contexts. The coverage at the interface and other properties of the formed adsorption layers determine the performance of a surfactant with regard to the desired application. Given the importance of these applications, there is a great demand for the comprehensive characterization and understanding of surfactant adsorption layers. In this review, we provide an overview of suitable experimental and simulation-based techniques and review the literature in which they were used for the investigation of surfactant adsorption layers. We come to the conclusion that, while these techniques have been successfully applied to investigate Langmuir monolayers of water-insoluble surfactants, their application to the study of Gibbs adsorption layers of water-soluble surfactants has not been fully exploited. Finally, we emphasize the great potential of these methods in providing a deeper understanding of the behavior of soluble surfactants at interfaces, which is crucial for optimizing their performance in various applications.
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Affiliation(s)
- Emanuel Schneck
- Department of Physics, Technische Universität Darmstadt, Hochschulstrasse 8, 64289 Darmstadt, Germany.
| | - Joshua Reed
- Department of Physics, Technische Universität Darmstadt, Hochschulstrasse 8, 64289 Darmstadt, Germany
| | - Takakazu Seki
- Graduate School of Science and Technology, Hirosaki University, Hirosaki, 036-8561 Aomori, Japan
| | - Yuki Nagata
- Max Planck Institute for Polymer Research, Ackermannweg 10, 55128 Mainz, Germany.
| | - Matej Kanduč
- Department of Theoretical Physics, Jožef Stefan Institute, Jamova 39, SI-1000 Ljubljana, Slovenia.
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17
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Hore DK. Phase of the second-order susceptibility in vibrational sum frequency generation spectroscopy: Origins, utility, and measurement techniques. J Chem Phys 2024; 161:060902. [PMID: 39132786 DOI: 10.1063/5.0220817] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/28/2024] [Accepted: 07/17/2024] [Indexed: 08/13/2024] Open
Abstract
Vibrational sum frequency generation can provide valuable structural information at surfaces and buried interfaces. Relating the measured spectra to the complex-valued second-order susceptibility χ(2) is at the heart of the technique and a requisite step in nearly all subsequent analyses. The magnitude and phase of χ(2) as a function of frequency reveal important information about molecules and materials in regions where centrosymmetry is broken. In this tutorial-style perspective, the origins of the χ(2) phase are first described, followed by the utility of phase determination. Finally, some practical methods of phase extraction are discussed.
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Affiliation(s)
- Dennis K Hore
- Department of Chemistry, University of Victoria, Victoria, British Columbia V8W 3V6, Canada and Department of Computer Science, University of Victoria, Victoria, British Columbia V8W 3V6, Canada
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18
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Smirnov KS. Effects of Surface Charge Distribution and Electrolyte Ions on the Nonlinear Spectra of Model Solid-Water Interfaces. Molecules 2024; 29:3758. [PMID: 39202839 PMCID: PMC11356812 DOI: 10.3390/molecules29163758] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/04/2024] [Revised: 07/31/2024] [Accepted: 08/01/2024] [Indexed: 09/03/2024] Open
Abstract
Molecular dynamics simulations of model charged solid/water interfaces were carried out to provide insight about the relationship between the second-order nonlinear susceptibility χ(2) and the structure of the interfacial water layer. The results of the calculations reveal that the density fluctuations of water extend to about 12 Å from the surface regardless of the system, while the orientational ordering of molecules is long-ranged and is sensitive to the presence of electrolytes. The charge localization on the surface was found to affect only the high-frequency part of the Im[χ(2)] spectrum, and the addition of salt has very little effect on the spectrum of the first water layer. For solid/neat water interfaces, the spectroscopically active part of the liquid phase has a thickness largely exceeding the region of density fluctuations, and this long-ranged nonlinear activity is mediated by the electric field of the molecules. The electrolyte ions and their hydration shells act in a destructive way on the molecular field. This effect, combined with the screening of the surface charge by ions, drastically reduces the thickness of the spectroscopic diffuse layer. There is an electrolyte concentration at which the nonlinear response of the diffuse layer is suppressed and the χ(2) spectrum of the interface essentially coincides with that of the first water layer.
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Affiliation(s)
- Konstantin S Smirnov
- Univ. Lille, CNRS, UMR 8516 - LASIRe - Laboratoire Avancé de Spectroscopie pour les Interactions la Réactivité et l'Environnement, F-59000 Lille, France
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19
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de la Puente M, Laage D. Impact of interfacial curvature on molecular properties of aqueous interfaces. J Chem Phys 2024; 160:234504. [PMID: 38888129 DOI: 10.1063/5.0210884] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/27/2024] [Accepted: 05/28/2024] [Indexed: 06/20/2024] Open
Abstract
The curvature of soft interfaces plays a crucial role in determining their mechanical and thermodynamic properties, both at macroscopic and microscopic scales. In the case of air/water interfaces, particular attention has recently focused on water microdroplets, due to their distinctive chemical reactivity. However, the specific impact of curvature on the molecular properties of interfacial water and interfacial reactivity has so far remained elusive. Here, we use molecular dynamics simulations to determine the effect of curvature on a broad range of structural, dynamical, and thermodynamical properties of the interface. For a droplet, a flat interface, and a cavity, we successively examine the structure of the hydrogen-bond network and its relation to vibrational spectroscopy, the dynamics of water translation, rotation, and hydrogen-bond exchanges, and the thermodynamics of ion solvation and ion-pair dissociation. Our simulations show that curvature predominantly impacts the hydrogen-bond structure through the fraction of dangling OH groups and the dynamics of interfacial water molecules. In contrast, curvature has a limited effect on solvation and ion-pair dissociation thermodynamics. For water microdroplets, this suggests that the curvature alone cannot fully account for the distinctive reactivity measured in these systems, which are of great importance for catalysis and atmospheric chemistry.
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Affiliation(s)
- M de la Puente
- PASTEUR, Department of Chemistry, École Normale Supérieure, PSL University, Sorbonne Université, CNRS, 75005 Paris, France
| | - D Laage
- PASTEUR, Department of Chemistry, École Normale Supérieure, PSL University, Sorbonne Université, CNRS, 75005 Paris, France
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20
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Malik R, Saito S, Chandra A. Effect of counterions on the structure and dynamics of water near a negatively charged surfactant: a theoretical vibrational sum frequency generation study. Phys Chem Chem Phys 2024; 26:17065-17074. [PMID: 38841889 DOI: 10.1039/d4cp00537f] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/07/2024]
Abstract
Charged aqueous interfaces are of paramount importance in electrochemical, biological and environmental sciences. The properties of aqueous interfaces with ionic surfactants can be influenced by the presence of counterions. Earlier experiments involving vibrational sum frequency generation (VSFG) spectroscopy of aqueous interfaces with negatively charged sodium dodecyl sulfate (Na+DS- or SDS) surfactants revealed that the hydrogen bonding strength of the interfacial water molecules follows a certain order when salts of monovalent and divalent cations are added. It is known that cations do not directly participate in hydrogen bonding with water molecules, rather they only influence the hydrogen bonded network through their electrostatic fields. In the current work, we have simulated the aqueous interfacial systems of sodium dodecyl sulfate in the presence of chloride salts of mono and divalent countercations. The electronic polarization effects on the ions are considered at a mean-field level within the electronic continuum correction model. Our calculations of the VSFG spectra show a blue shift in the presence of added countercations whose origin is traced to different relative contributions of water molecules from the solvation shells of the surfactant headgroups and the remaining water molecules in the presence of countercations. Furthermore, the cations shield the electric fields of the surfactant headgroups, which in turn influences the contributions of water molecules to the total VSFG spectrum. This shielding effect becomes more significant when divalent countercations are present. The dynamics of water molecules is found to be slower at the interface in comparison to the bulk. The interfacial depth dependence of various dynamical quantities shows that the interface is structurally and dynamically more heterogeneous at the microscopic level.
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Affiliation(s)
- Ravi Malik
- Department of Chemistry, Indian Institute of Technology Kanpur, Uttar Pradesh, 208016, India.
- Department of Theoretical and Computational Molecular Science, Institute of Molecular Science, Myodaiji, Okazaki 444-8585, Aichi, Japan
| | - Shinji Saito
- Department of Theoretical and Computational Molecular Science, Institute of Molecular Science, Myodaiji, Okazaki 444-8585, Aichi, Japan
- Department of Chemistry, Indian Institute of Technology Kanpur, Uttar Pradesh, 208016, India.
| | - Amalendu Chandra
- Department of Chemistry, Indian Institute of Technology Kanpur, Uttar Pradesh, 208016, India.
- Department of Theoretical and Computational Molecular Science, Institute of Molecular Science, Myodaiji, Okazaki 444-8585, Aichi, Japan
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21
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Zheng X, Ni Z, Pei Q, Wang M, Tan J, Bai S, Shi F, Ye S. Probing the Molecular Structure and Dynamics of Membrane-Bound Proteins during Misfolding Processes by Sum-Frequency Generation Vibrational Spectroscopy. Chempluschem 2024; 89:e202300684. [PMID: 38380553 DOI: 10.1002/cplu.202300684] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/23/2023] [Revised: 02/17/2024] [Accepted: 02/20/2024] [Indexed: 02/22/2024]
Abstract
Protein misfolding and amyloid formation are implicated in the protein dysfunction, but the underlying mechanism remains to be clarified due to the lack of effective tools for detecting the transient intermediates. Sum frequency generation vibrational spectroscopy (SFG-VS) has emerged as a powerful tool for identifying the structure and dynamics of proteins at the interfaces. In this review, we summarize recent SFG-VS studies on the structure and dynamics of membrane-bound proteins during misfolding processes. This paper first introduces the methods for determining the secondary structure of interfacial proteins: combining chiral and achiral spectra of amide A and amide I bands and combining amide I, amide II, and amide III spectral features. To demonstrate the ability of SFG-VS in investigating the interfacial protein misfolding and amyloid formation, studies on the interactions between different peptides/proteins (islet amyloid polypeptide, amyloid β, prion protein, fused in sarcoma protein, hen egg-white lysozyme, fusing fusion peptide, class I hydrophobin SC3 and class II hydrophobin HFBI) and surfaces such as lipid membranes are discussed. These molecular-level studies revealed that SFG-VS can provide a unique understanding of the mechanism of interfacial protein misfolding and amyloid formation in real time, in situ and without any exogenous labeling.
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Affiliation(s)
- Xiaoxuan Zheng
- Hefei National Research Center for Physical Sciences at the Microscale, University of Science and Technology of China, 96 Jinzhai Road, Hefei, Anhui, 230026, China
| | - Zijian Ni
- Hefei National Research Center for Physical Sciences at the Microscale, University of Science and Technology of China, 96 Jinzhai Road, Hefei, Anhui, 230026, China
| | - Quanbing Pei
- Hefei National Research Center for Physical Sciences at the Microscale, University of Science and Technology of China, 96 Jinzhai Road, Hefei, Anhui, 230026, China
| | - Mengmeng Wang
- Hefei National Research Center for Physical Sciences at the Microscale, University of Science and Technology of China, 96 Jinzhai Road, Hefei, Anhui, 230026, China
| | - Junjun Tan
- Hefei National Research Center for Physical Sciences at the Microscale, University of Science and Technology of China, 96 Jinzhai Road, Hefei, Anhui, 230026, China
| | - Shiyu Bai
- Hefei National Research Center for Physical Sciences at the Microscale, University of Science and Technology of China, 96 Jinzhai Road, Hefei, Anhui, 230026, China
| | - Fangwen Shi
- Hefei National Research Center for Physical Sciences at the Microscale, University of Science and Technology of China, 96 Jinzhai Road, Hefei, Anhui, 230026, China
| | - Shuji Ye
- Hefei National Research Center for Physical Sciences at the Microscale, University of Science and Technology of China, 96 Jinzhai Road, Hefei, Anhui, 230026, China
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22
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Buraschi M, Horsfield AP, Cucinotta CS. Revealing Interface Polarization Effects on the Electrical Double Layer with Efficient Open Boundary Simulations under Potential Control. J Phys Chem Lett 2024; 15:4872-4879. [PMID: 38682685 PMCID: PMC11089570 DOI: 10.1021/acs.jpclett.3c03615] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/27/2023] [Revised: 04/17/2024] [Accepted: 04/23/2024] [Indexed: 05/01/2024]
Abstract
A major challenge in modeling interfacial processes in electrochemical (EC) devices is performing simulations at constant potential. This requires an open-boundary description of the electrons, so that they can enter and leave the computational cell. To enable realistic modeling of EC processes under potential control we have interfaced density functional theory with the hairy probe method in the weak coupling limit (Zauchner et al. Phys. Rev. B 2018, 97, 045116). Our implementation was systematically tested using simple parallel-plate capacitor models with pristine surfaces and a single layer of adsorbed water molecules. Remarkably, our code's efficiency is comparable with a standard DFT calculation. We reveal that local field effects at the electrical double layer induced by the change of applied potential can significantly affect the energies of chemical steps in heterogeneous electrocatalysis. Our results demonstrate the importance of an explicit modeling of the applied potential in a simulation and provide an efficient tool to control this critical parameter.
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Affiliation(s)
- Margherita Buraschi
- Department
of Chemistry, Imperial College London, White City Campus, London W12 0BZ, U.K.
| | - Andrew P. Horsfield
- Department
of Materials, Imperial College London, South Kensington Campus, London SW7 2AZ, U.K.
- Thomas
Young Centre, London, U.K.
| | - Clotilde S. Cucinotta
- Department
of Chemistry, Imperial College London, White City Campus, London W12 0BZ, U.K.
- Thomas
Young Centre, London, U.K.
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23
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Yu CC, Seki T, Chiang KY, Wang Y, Bonn M, Nagata Y. Depth-profiling alkyl chain order in unsaturated lipid monolayers on water. J Chem Phys 2024; 160:114902. [PMID: 38506293 DOI: 10.1063/5.0190519] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/06/2023] [Accepted: 02/28/2024] [Indexed: 03/21/2024] Open
Abstract
Unsaturated lipids with C=C groups in their alkyl chains are widely present in the cell membrane and food. The C=C groups alter the lipid packing density, membrane stability, and persistence against lipid oxidation. Yet, molecular-level insights into the structure of the unsaturated lipids remain scarce. Here, we probe the molecular structure and organization of monolayers of unsaturated lipids on the water surface using heterodyne-detected sum-frequency generation (HD-SFG) spectroscopy. We vary the location of the C=C in the alkyl chain and find that at high lipid density, the location of the C=C group affects neither the interfacial water organization nor the tail of the alkyl chain. Based on this observation, we use the C=C stretch HD-SFG response to depth-profile the alkyl chain conformation of the unsaturated lipid. We find that the first 1/3 of carbon atoms from the headgroup are relatively rigid, oriented perpendicular to the surface. In contrast, the remaining carbon atoms can be approximated as free rotators, introducing the disordering of the alkyl chains.
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Affiliation(s)
- Chun-Chieh Yu
- Max Planck Institute for Polymer Research, Ackermannweg 10, 55128 Mainz, Germany
| | - Takakazu Seki
- Max Planck Institute for Polymer Research, Ackermannweg 10, 55128 Mainz, Germany
- Graduate School of Science and Technology, Hirosaki University, Hirosaki, 036-8561 Aomori, Japan
| | - Kuo-Yang Chiang
- Max Planck Institute for Polymer Research, Ackermannweg 10, 55128 Mainz, Germany
| | - Yongkang Wang
- Max Planck Institute for Polymer Research, Ackermannweg 10, 55128 Mainz, Germany
| | - Mischa Bonn
- Max Planck Institute for Polymer Research, Ackermannweg 10, 55128 Mainz, Germany
| | - Yuki Nagata
- Max Planck Institute for Polymer Research, Ackermannweg 10, 55128 Mainz, Germany
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24
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Sung W, Inoue KI, Nihonyanagi S, Tahara T. Unified picture of vibrational relaxation of OH stretch at the air/water interface. Nat Commun 2024; 15:1258. [PMID: 38341439 DOI: 10.1038/s41467-024-45388-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/17/2023] [Accepted: 01/19/2024] [Indexed: 02/12/2024] Open
Abstract
The elucidation of the energy dissipation process is crucial for understanding various phenomena occurring in nature. Yet, the vibrational relaxation and its timescale at the water interface, where the hydrogen-bonding network is truncated, are not well understood and are still under debate. In the present study, we focus on the OH stretch of interfacial water at the air/water interface and investigate its vibrational relaxation by femtosecond time-resolved, heterodyne-detected vibrational sum-frequency generation (TR-HD-VSFG) spectroscopy. The temporal change of the vibrationally excited hydrogen-bonded (HB) OH stretch band (ν=1→2 transition) is measured, enabling us to determine reliable vibrational relaxation (T1) time. The T1 times obtained with direct excitations of HB OH stretch are 0.2-0.4 ps, which are similar to the T1 time in bulk water and do not noticeably change with the excitation frequency. It suggests that vibrational relaxation of the interfacial HB OH proceeds predominantly with the intramolecular relaxation mechanism as in the case of bulk water. The delayed rise and following decay of the excited-state HB OH band are observed with excitation of free OH stretch, indicating conversion from excited free OH to excited HB OH (~0.9 ps) followed by relaxation to low-frequency vibrations (~0.3 ps). This study provides a complete set of the T1 time of the interfacial OH stretch and presents a unified picture of its vibrational relaxation at the air/water interface.
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Affiliation(s)
- Woongmo Sung
- Molecular Spectroscopy Laboratory, RIKEN, 2-1 Hirosawa, Wako, Saitama, 351-0198, Japan
| | - Ken-Ichi Inoue
- Molecular Spectroscopy Laboratory, RIKEN, 2-1 Hirosawa, Wako, Saitama, 351-0198, Japan
- Department of Chemistry, Graduate School of Science, Tohoku University, Sendai, 980-8578, Japan
| | - Satoshi Nihonyanagi
- Molecular Spectroscopy Laboratory, RIKEN, 2-1 Hirosawa, Wako, Saitama, 351-0198, Japan
- Ultrafast Spectroscopy Research Team, RIKEN Center for Advanced Photonics (RAP), 2-1 Hirosawa, Wako, Saitama, 351-0198, Japan
| | - Tahei Tahara
- Molecular Spectroscopy Laboratory, RIKEN, 2-1 Hirosawa, Wako, Saitama, 351-0198, Japan.
- Ultrafast Spectroscopy Research Team, RIKEN Center for Advanced Photonics (RAP), 2-1 Hirosawa, Wako, Saitama, 351-0198, Japan.
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25
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Wang Y, Nagata Y, Bonn M. Substrate effect on charging of electrified graphene/water interfaces. Faraday Discuss 2024; 249:303-316. [PMID: 37772472 DOI: 10.1039/d3fd00107e] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/30/2023]
Abstract
Graphene, a transparent two-dimensional (2D) conductive electrode, has brought extensive new perspectives and prospects to electrochemical systems, such as chemical sensors, energy storage, and energy conversion devices. In many of these applications, graphene, supported on a substrate, is in contact with an aqueous solution. An increasing number of studies indicate that the substrate, rather than graphene, determines the organization of water in contact with graphene, i.e., the electric double layer (EDL) structure near the electrified graphene, and the wetting behavior of the graphene: the graphene sheet is transparent in terms of its supporting substrate. By applying surface-specific heterodyne-detected sum-frequency generation (HD-SFG) spectroscopy to the silicon dioxide (SiO2)-supported graphene electrode/aqueous electrolyte interface and comparing the data with those for the calcium fluoride (CaF2)-supported graphene [Y. Wang et al., Angew. Chem., Int. Ed., 2023, 62, e202216604], we discuss the impact of the different substrates on the charging of both the graphene and the substrate upon applying potentials. The SiO2-supported graphene shows pseudocapacitive behavior, consistent with the CaF2-supported graphene case, although the surface charges on SiO2 and CaF2 differ substantially. The SiO2 surface is already negatively charged at +0.57 V (vs. Pd/H2), and the negative surface charge is doubled when negative potentials are applied, in contrast with the CaF2 case, where the positive charge is reduced when negative potentials are applied. Interestingly, the charging of the graphene sheet is almost identical between the negatively charged SiO2 surface and positively charged CaF2 surface, demonstrating that the graphene charging is decoupled from the charging of the substrates.
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Affiliation(s)
- Yongkang Wang
- Molecular Spectroscopy Department, Max Planck Institute for Polymer Research, Ackermannweg 10, 55128 Mainz, Germany.
| | - Yuki Nagata
- Molecular Spectroscopy Department, Max Planck Institute for Polymer Research, Ackermannweg 10, 55128 Mainz, Germany.
| | - Mischa Bonn
- Molecular Spectroscopy Department, Max Planck Institute for Polymer Research, Ackermannweg 10, 55128 Mainz, Germany.
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26
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Ge A, Nagai R, Nemoto K, Li B, Kannari K, Inoue KI, Ye S. Unraveling the solvent stability on the cathode surface of Li-O 2 batteries by using in situ vibrational spectroscopies. Faraday Discuss 2024; 248:119-133. [PMID: 37842815 DOI: 10.1039/d3fd00092c] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2023]
Abstract
In aprotic lithium-oxygen (Li-O2) batteries, solvent properties are crucial in the charge/discharge processes. Therefore, a thorough understanding of the solvent stability at the cathode surface during the oxygen reduction/evolution reactions (ORR/OER) is essential for the rational design of high-performance electrolytes. In this study, the stability of typical solvents, a series of glyme solvents with different chain lengths, has been investigated during the ORR/OER by in situ vibrational spectroscopy measurements of sum frequency generation (SFG) spectroscopy and infrared reflection absorption spectroscopy (IRRAS). The structural evolution and decomposition mechanism of the solvents during ORR/OER have been discussed based on the observations. Our results demonstrate that superoxide (O2-) generated during the ORR plays a critical role in the stability of the solvents.
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Affiliation(s)
- Aimin Ge
- Center for Advanced Low-dimension Materials, Donghua University, Shanghai 201620, P. R. China
| | - Ryuuta Nagai
- Department of Chemistry, Graduate School of Science, Tohoku University, Sendai 980-8578, Japan.
| | - Kota Nemoto
- Department of Chemistry, Graduate School of Science, Tohoku University, Sendai 980-8578, Japan.
| | - Bingbing Li
- Department of Chemistry, Graduate School of Science, Tohoku University, Sendai 980-8578, Japan.
| | - Koki Kannari
- Department of Chemistry, Graduate School of Science, Tohoku University, Sendai 980-8578, Japan.
| | - Ken-Ichi Inoue
- Department of Chemistry, Graduate School of Science, Tohoku University, Sendai 980-8578, Japan.
| | - Shen Ye
- Department of Chemistry, Graduate School of Science, Tohoku University, Sendai 980-8578, Japan.
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27
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Gallop NP, Maslennikov DR, Mondal N, Goetz KP, Dai Z, Schankler AM, Sung W, Nihonyanagi S, Tahara T, Bodnarchuk MI, Kovalenko MV, Vaynzof Y, Rappe AM, Bakulin AA. Ultrafast vibrational control of organohalide perovskite optoelectronic devices using vibrationally promoted electronic resonance. NATURE MATERIALS 2024; 23:88-94. [PMID: 37985838 PMCID: PMC10769873 DOI: 10.1038/s41563-023-01723-w] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/02/2022] [Accepted: 10/12/2023] [Indexed: 11/22/2023]
Abstract
Vibrational control (VC) of photochemistry through the optical stimulation of structural dynamics is a nascent concept only recently demonstrated for model molecules in solution. Extending VC to state-of-the-art materials may lead to new applications and improved performance for optoelectronic devices. Metal halide perovskites are promising targets for VC due to their mechanical softness and the rich array of vibrational motions of both their inorganic and organic sublattices. Here, we demonstrate the ultrafast VC of FAPbBr3 perovskite solar cells via intramolecular vibrations of the formamidinium cation using spectroscopic techniques based on vibrationally promoted electronic resonance. The observed short (~300 fs) time window of VC highlights the fast dynamics of coupling between the cation and inorganic sublattice. First-principles modelling reveals that this coupling is mediated by hydrogen bonds that modulate both lead halide lattice and electronic states. Cation dynamics modulating this coupling may suppress non-radiative recombination in perovskites, leading to photovoltaics with reduced voltage losses.
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Affiliation(s)
- Nathaniel P Gallop
- Department of Chemistry and Centre for Processable Electronics, Imperial College London, London, UK
| | - Dmitry R Maslennikov
- Department of Chemistry and Centre for Processable Electronics, Imperial College London, London, UK
| | - Navendu Mondal
- Department of Chemistry and Centre for Processable Electronics, Imperial College London, London, UK
| | - Katelyn P Goetz
- Chair for Emerging Electronic Technologies, Technical University of Dresden, Dresden, Germany
| | - Zhenbang Dai
- Department of Chemistry, University of Pennsylvania, Philadelphia, PA, USA
| | - Aaron M Schankler
- Department of Chemistry, University of Pennsylvania, Philadelphia, PA, USA
| | - Woongmo Sung
- Molecular Spectroscopy Laboratory, RIKEN, Wako, Saitama, Japan
| | - Satoshi Nihonyanagi
- Molecular Spectroscopy Laboratory, RIKEN, Wako, Saitama, Japan
- RIKEN Center for Advanced Photonics (RAP), RIKEN, Wako, Saitama, Japan
| | - Tahei Tahara
- Molecular Spectroscopy Laboratory, RIKEN, Wako, Saitama, Japan
- RIKEN Center for Advanced Photonics (RAP), RIKEN, Wako, Saitama, Japan
| | - Maryna I Bodnarchuk
- Institute of Inorganic Chemistry, Department of Chemistry and Applied Biosciences, ETH Zürich, Zürich, Switzerland
- Laboratory for Thin Films and Photovoltaics, Empa, Swiss Federal Laboratories for Materials Science and Technology, Dübendorf, Switzerland
| | - Maksym V Kovalenko
- Institute of Inorganic Chemistry, Department of Chemistry and Applied Biosciences, ETH Zürich, Zürich, Switzerland
- Laboratory for Thin Films and Photovoltaics, Empa, Swiss Federal Laboratories for Materials Science and Technology, Dübendorf, Switzerland
| | - Yana Vaynzof
- Chair for Emerging Electronic Technologies, Technical University of Dresden, Dresden, Germany
- Leibniz Institute for Solid State and Materials Research Dresden, Dresden, Germany
| | - Andrew M Rappe
- Department of Chemistry, University of Pennsylvania, Philadelphia, PA, USA
| | - Artem A Bakulin
- Department of Chemistry and Centre for Processable Electronics, Imperial College London, London, UK.
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28
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Malik R, Chandra A, Das B, Chandra A. Theoretical Study of the Two-Dimensional Vibrational Sum Frequency Generation Spectroscopy of the Air-Water Interface at Varying Temperature and Its Connections to the Interfacial Structure and Dynamics. J Phys Chem B 2023; 127:10880-10895. [PMID: 38055625 DOI: 10.1021/acs.jpcb.3c03205] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/08/2023]
Abstract
We performed a theoretical study of the temperature variation of two-dimensional vibrational sum frequency generation (2D-VSFG) spectra of the OH stretch modes at air-water interfaces in the mid-IR region. The calculations are performed at four different temperatures from 250 to 325 K by using a combination of techniques involving response function formalism of nonlinear spectroscopy, electronic structure calculations, and molecular dynamics simulations. Also, the calculations are performed for isotopically dilute solutions so that the intra- and intermolecular coupling between the vibrational modes of interest can be ignored. We have established the connections of temperature variation of various frequency- and time-dependent features of the calculated spectra to the changes in the underlying structure and dynamics of the interfaces. The results reveal that interfacial water is dynamically more heterogeneous than bulk water, with three dominant dynamical processes exhibiting their corresponding time-dependent features in the 2D-VSFG spectrum. These are the spectral diffusion of hydrogen-bonded OH groups at the interface, conversion of an initially hydrogen-bonded OH group to a dangling OH which is a stable state for surface water, unlike the bulk water, and the third one, which involves the conversion of an initially free or dangling OH group to its hydrogen-bonded state at the interface. The temporal appearance of the cross peaks corresponding to interconversion of the hydrogen-bonded state to the dangling state or vice versa of an interfacial OH group is found to take place at a slower rate than the dynamics of spectral diffusion of hydrogen-bonded molecules at the interface, which, in turn, is slower than the corresponding spectral diffusion of bulk water molecules. The temperature variation of these dynamic processes can be linked to the decay of appropriate hydrogen-bond and non-hydrogen-bond time correlation functions of interfacial water molecules for the different air-water systems studied in this work.
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Affiliation(s)
- Ravi Malik
- Department of Chemistry, Indian Institute of Technology Kanpur, Kanpur, Uttar Pradesh 208016, India
| | - Abhilash Chandra
- Department of Chemistry, Indian Institute of Technology Kanpur, Kanpur, Uttar Pradesh 208016, India
| | - Banshi Das
- Department of Chemistry, Indian Institute of Technology Kanpur, Kanpur, Uttar Pradesh 208016, India
| | - Amalendu Chandra
- Department of Chemistry, Indian Institute of Technology Kanpur, Kanpur, Uttar Pradesh 208016, India
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29
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Patra A, Bandyopadhyay A, Roy S, Mondal JA. Origin of Strong Hydrogen Bonding and Preferred Orientation of Water at Uncharged Polyethylene Glycol Polymer/Water Interface. J Phys Chem Lett 2023; 14:11359-11366. [PMID: 38065092 DOI: 10.1021/acs.jpclett.3c03098] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2023]
Abstract
Polyethylene glycol (PEG), a water-soluble non-ionic polymer, finds diverse applications from Li-ion batteries to drug delivery. The effectiveness of PEG in these contexts hinges on water's behavior at PEG/water interfaces. Employing heterodyne-detected vibrational sum frequency generation and Raman spectroscopy along with a novel analytical approach, termed difference spectroscopy with simultaneous curve-fitting analysis, we observed that water exhibits both "hydrogen-up" and "hydrogen-down" orientations at PEG(≥400u)/water interfaces. As the molar mass of PEG increases, the contribution of the strongly hydrogen-bonded and H-up-oriented water rises. We propose that the PEG-affected interfacial water originates from the asymmetrical hydration of the surface-adsorbed PEG, as evidenced by the resemblance between the water spectra in the hydration shell of PEG and those at the PEG/water interface. These findings elucidate the molecular mechanism underlying PEG's catalytic role in water splitting at membrane interfaces.
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Affiliation(s)
- Animesh Patra
- School of Chemistry, Centre for Excellence in Basic Sciences, Mumbai 400098, India
| | - Anisha Bandyopadhyay
- Radiation & Photochemistry Division, Bhabha Atomic Research Centre, Homi Bhabha National Institute, Trombay, Mumbai 400085, India
| | - Subhadip Roy
- Radiation & Photochemistry Division, Bhabha Atomic Research Centre, Homi Bhabha National Institute, Trombay, Mumbai 400085, India
| | - Jahur Alam Mondal
- Radiation & Photochemistry Division, Bhabha Atomic Research Centre, Homi Bhabha National Institute, Trombay, Mumbai 400085, India
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30
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Prasoon A, Yu X, Hambsch M, Bodesheim D, Liu K, Zacarias A, Nguyen NN, Seki T, Dianat A, Croy A, Cuniberti G, Fontaine P, Nagata Y, Mannsfeld SCB, Dong R, Bonn M, Feng X. Site-selective chemical reactions by on-water surface sequential assembly. Nat Commun 2023; 14:8313. [PMID: 38097633 PMCID: PMC10721922 DOI: 10.1038/s41467-023-44129-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/25/2023] [Accepted: 12/01/2023] [Indexed: 12/17/2023] Open
Abstract
Controlling site-selectivity and reactivity in chemical reactions continues to be a key challenge in modern synthetic chemistry. Here, we demonstrate the discovery of site-selective chemical reactions on the water surface via a sequential assembly approach. A negatively charged surfactant monolayer on the water surface guides the electrostatically driven, epitaxial, and aligned assembly of reagent amino-substituted porphyrin molecules, resulting in a well-defined J-aggregated structure. This constrained geometry of the porphyrin molecules prompts the subsequent directional alignment of the perylenetetracarboxylic dianhydride reagent, enabling the selective formation of a one-sided imide bond between porphyrin and reagent. Surface-specific in-situ spectroscopies reveal the underlying mechanism of the dynamic interface that promotes multilayer growth of the site-selective imide product. The site-selective reaction on the water surface is further demonstrated by three reversible and irreversible chemical reactions, such as imide-, imine-, and 1, 3-diazole (imidazole)- bonds involving porphyrin molecules. This unique sequential assembly approach enables site-selective chemical reactions that can bring on-water surface synthesis to the forefront of modern organic chemistry.
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Affiliation(s)
- Anupam Prasoon
- Center for Advancing Electronics Dresden (cfaed) and Faculty of Chemistry and Food Chemistry, Technische Universität Dresden, 01062, Dresden, Germany
- Max Planck Institute for Microstructure Physics, Halle (Saale), D-06120, Germany
| | - Xiaoqing Yu
- Max Planck Institute for Polymer Research, Ackermannweg 10, 55128, Mainz, Germany
| | - Mike Hambsch
- Center for Advancing Electronics Dresden (cfaed) and Faculty of Electrical and Computer Engineering, Technische Universität Dresden, 01062, Dresden, Germany
| | - David Bodesheim
- Institute for Materials Science and Max Bergmann Center of Biomaterials, Technische Universität Dresden, 01062, Dresden, Germany
| | - Kejun Liu
- Center for Advancing Electronics Dresden (cfaed) and Faculty of Chemistry and Food Chemistry, Technische Universität Dresden, 01062, Dresden, Germany
| | - Angelica Zacarias
- Max Planck Institute for Microstructure Physics, Halle (Saale), D-06120, Germany
| | - Nguyen Ngan Nguyen
- Center for Advancing Electronics Dresden (cfaed) and Faculty of Chemistry and Food Chemistry, Technische Universität Dresden, 01062, Dresden, Germany
| | - Takakazu Seki
- Max Planck Institute for Polymer Research, Ackermannweg 10, 55128, Mainz, Germany
| | - Aerzoo Dianat
- Institute for Materials Science and Max Bergmann Center of Biomaterials, Technische Universität Dresden, 01062, Dresden, Germany
| | - Alexander Croy
- Institute of Physical Chemistry, Friedrich Schiller University Jena, 07737, Jena, Germany
| | - Gianaurelio Cuniberti
- Institute for Materials Science and Max Bergmann Center of Biomaterials, Technische Universität Dresden, 01062, Dresden, Germany
- Dresden Center for Computational Materials Science (DCMS), Technische Universität Dresden, 01062, Dresden, Germany
| | - Philippe Fontaine
- Synchrotron SOLEIL, L'Orme des Merisiers, Départementale 128, 91190, Saint-Aubin, France
| | - Yuki Nagata
- Max Planck Institute for Polymer Research, Ackermannweg 10, 55128, Mainz, Germany
| | - Stefan C B Mannsfeld
- Center for Advancing Electronics Dresden (cfaed) and Faculty of Electrical and Computer Engineering, Technische Universität Dresden, 01062, Dresden, Germany.
| | - Renhao Dong
- Center for Advancing Electronics Dresden (cfaed) and Faculty of Chemistry and Food Chemistry, Technische Universität Dresden, 01062, Dresden, Germany.
- Key Laboratory of Colloid and Interface Chemistry of the Ministry of Education, School of Chemistry and Chemical Engineering, Shandong University, Jinan, 250100, China.
| | - Mischa Bonn
- Max Planck Institute for Polymer Research, Ackermannweg 10, 55128, Mainz, Germany.
| | - Xinliang Feng
- Center for Advancing Electronics Dresden (cfaed) and Faculty of Chemistry and Food Chemistry, Technische Universität Dresden, 01062, Dresden, Germany.
- Max Planck Institute for Microstructure Physics, Halle (Saale), D-06120, Germany.
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31
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Clarke RJ. Electrostatic switch mechanisms of membrane protein trafficking and regulation. Biophys Rev 2023; 15:1967-1985. [PMID: 38192346 PMCID: PMC10771482 DOI: 10.1007/s12551-023-01166-2] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/24/2023] [Accepted: 11/17/2023] [Indexed: 01/10/2024] Open
Abstract
Lipid-protein interactions are normally classified as either specific or general. Specific interactions refer to lipid binding to specific binding sites within a membrane protein, thereby modulating the protein's thermal stability or kinetics. General interactions refer to indirect effects whereby lipids affect membrane proteins by modulating the membrane's physical properties, e.g., its fluidity, thickness, or dipole potential. It is not widely recognized that there is a third distinct type of lipid-protein interaction. Intrinsically disordered N- or C-termini of membrane proteins can interact directly but nonspecifically with the surrounding membrane. Many peripheral membrane proteins are held to the cytoplasmic surface of the plasma membrane via a cooperative combination of two forces: hydrophobic anchoring and electrostatic attraction. An acyl chain, e.g., myristoyl, added post-translationally to one of the protein's termini inserts itself into the lipid matrix and helps hold peripheral membrane proteins onto the membrane. Electrostatic attraction occurs between positively charged basic amino acid residues (lysine and arginine) on one of the protein's terminal tails and negatively charged phospholipid head groups, such as phosphatidylserine. Phosphorylation of either serine or tyrosine residues on the terminal tails via regulatory protein kinases allows for an electrostatic switch mechanism to control trafficking of the protein. Kinase action reduces the positive charge on the protein's tail, weakening the electrostatic attraction and releasing the protein from the membrane. A similar mechanism regulates many integral membrane proteins, but here only electrostatic interactions are involved, and the electrostatic switch modulates protein activity by altering the stabilities of different protein conformational states.
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Affiliation(s)
- Ronald J. Clarke
- School of Chemistry, University of Sydney, Sydney, NSW 2006 Australia
- The University of Sydney Nano Institute, Sydney, NSW 2006 Australia
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32
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Yamaguchi S, Takayama T, Otosu T. Appraisal of TIP4P-type models at water surface. J Chem Phys 2023; 159:171101. [PMID: 37909448 DOI: 10.1063/5.0171999] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2023] [Accepted: 10/03/2023] [Indexed: 11/03/2023] Open
Abstract
In view of the current situation in which non-polarizable rigid water models have been scarcely examined against surface-specific properties, we appraise TIP4P-type models at the liquid water surface on the basis of heterodyne-detected sum frequency generation (HD-SFG) spectroscopy. We find in the HD-SFG spectrum of the water surface that the peak frequency of the hydrogen-bonded OH band, the half width at half maximum of the hydrogen-bonded OH band, and the full width at half maximum of the free OH band are best reproduced by TIP4P, TIP4P/Ew, and TIP4P/Ice, respectively, whereas it is already well known that TIP4P/2005 best reproduces the surface tension. These TIP4P-type models perform better at the water surface in terms of the present appraisal items than some polarizable models in the literature.
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Affiliation(s)
- Shoichi Yamaguchi
- Department of Applied Chemistry, Graduate School of Science and Engineering, Saitama University, 255 Shimo-Okubo, Sakura, Saitama 338-8570, Japan
| | - Tetsuyuki Takayama
- Department of Applied Chemistry, Graduate School of Science and Engineering, Saitama University, 255 Shimo-Okubo, Sakura, Saitama 338-8570, Japan
| | - Takuhiro Otosu
- Department of Applied Chemistry, Graduate School of Science and Engineering, Saitama University, 255 Shimo-Okubo, Sakura, Saitama 338-8570, Japan
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33
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Sengupta S, Versluis J, Bakker HJ. Observation of a Two-Dimensional Hydrophobic Collapse at the Surface of Water Using Heterodyne-Detected Surface Sum-Frequency Generation. J Phys Chem Lett 2023; 14:9285-9290. [PMID: 37815274 PMCID: PMC10591499 DOI: 10.1021/acs.jpclett.3c01530] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/03/2023] [Accepted: 10/04/2023] [Indexed: 10/11/2023]
Abstract
We study the effect of sodium chloride (NaCl) on the properties of the interface of water and the surfactant dodecyl sulfate (DS-) using heterodyne-detected vibrational sum-frequency generation spectroscopy. We find that the signal of the O-H stretch vibrations of oriented water molecules at the interface is highly nonlinearly dependent on the NaCl concentration. This nonlinear dependence is explained by a combination of screening of the electric field of surface-bound DS- ions pointing into the bulk and screening of the Coulomb repulsion between the headgroups of the DS- ions in the surface plane. The latter effect strongly increases the oriented water signal within a limited NaCl concentration range of 10-100 mM, indicating a two-dimensional hydrophobic collapse of the surfactant layer. The occurrence of collapse is supported by model calculations of the surface potential and surface surfactant density.
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Affiliation(s)
| | - Jan Versluis
- AMOLF, Science Park 104, 1098 XG Amsterdam, The Netherlands
| | - Huib J. Bakker
- AMOLF, Science Park 104, 1098 XG Amsterdam, The Netherlands
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34
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Liu S, Liang H, Zong H, Yang H, Chen J, Zhang D, Su Z, Kong W. Experimental investigation of expansive bending pipe flow separation control using a surface dielectric barrier discharge plasma actuator. Sci Prog 2023; 106:368504231216832. [PMID: 38105488 PMCID: PMC10729633 DOI: 10.1177/00368504231216832] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2023]
Abstract
Adverse pressure gradients can cause severe flow separation within typical S-shaped inlets. This results in a total pressure distortion at the aerodynamic interface plane (AIP). The expansive bending pipe, where flow separation also occurs due to the adverse pressure gradient, is the basis for investigations into S-shaped inlets. In this study, surface dielectric barrier discharge (SDBD) plasma actuators are used to moderate the total pressure distortion in the AIP of an expansive bending pipe under a 10 m/s incoming flow. Also, the influences of actuation voltage amplitude and pulsed frequency on the total pressure distortion of the AIP are investigated under two plasma actuation modes, nanosecond pulsed SDBD and alternating current (AC) SDBD. Under optimal actuation parameters, the nanosecond pulsed SDBD and the AC-SDBD can reduce the distortion index by 14.93% and 32.22%, respectively. The results demonstrate the effectiveness of SDBD plasma actuators in suppressing flow separation within expansive bending pipes.
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Affiliation(s)
- Shimin Liu
- National Key Lab of Aerospace Power System and Plasma Technology, Air Force Engineering University, Xi’an, People's Republic of China
| | - Hua Liang
- National Key Lab of Aerospace Power System and Plasma Technology, Air Force Engineering University, Xi’an, People's Republic of China
| | - Haohua Zong
- School of Mechanical Engineering, Xi'an Jiaotong University, Xi’an, People's Republic of China
| | - Hesen Yang
- National Key Lab of Aerospace Power System and Plasma Technology, Air Force Engineering University, Xi’an, People's Republic of China
| | - Jie Chen
- National Key Lab of Aerospace Power System and Plasma Technology, Air Force Engineering University, Xi’an, People's Republic of China
| | - Dongsheng Zhang
- National Key Lab of Aerospace Power System and Plasma Technology, Air Force Engineering University, Xi’an, People's Republic of China
| | - Zhi Su
- National Key Lab of Aerospace Power System and Plasma Technology, Air Force Engineering University, Xi’an, People's Republic of China
| | - Weiliang Kong
- The Green Aerotechnics Research Institute, Chongqing Jiaotong University, Chongqing, People's Republic of China
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35
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Khan T, John B, Niemann R, Paarmann A, Wolf M, Thämer M. Compact oblique-incidence nonlinear widefield microscopy with paired-pixel balanced imaging. OPTICS EXPRESS 2023; 31:28792-28804. [PMID: 37710691 DOI: 10.1364/oe.495903] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/22/2023] [Accepted: 07/10/2023] [Indexed: 09/16/2023]
Abstract
Nonlinear (vibrational) microscopy has emerged as a successful tool for the investigation of molecular systems as it combines label-free chemical characterization with spatial resolution on the sub-micron scale. In addition to the molecular recognition, the physics of the nonlinear interactions allows in principle to obtain structural information on the molecular level such as molecular orientations. Due to technical limitations such as the relatively complex imaging geometry with the required oblique sample irradiation and insufficient sensitivity of the instrument this detailed molecular information is typically not accessible using widefield imaging. Here, we present, what we believe to be, a new microscope design that addresses both challenges. We introduce a simplified imaging geometry that enables the measurement of distortion-free widefield images with free space oblique sample irradiation achieving high spatial resolution (∼1 µm). Furthermore, we present a method based on a paired-pixel balanced detection system for sensitivity improvement. With this technique, we demonstrate a substantial enhancement of the signal-to-noise ratio of up to a factor of 10. While both experimental concepts presented in this work are very general and can, in principle, be applied to various microscopy techniques, we demonstrate their performance for the specific case of heterodyned, sum frequency generation (SFG) microscopy.
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36
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Pullanchery S, Zhang L, Kulik S, Roke S. Interfacial Inversion, Interference, and IR Absorption in Vibrational Sum Frequency Scattering Experiments. J Phys Chem B 2023; 127:6795-6803. [PMID: 37470215 PMCID: PMC10405221 DOI: 10.1021/acs.jpcb.3c02727] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/25/2023] [Revised: 06/26/2023] [Indexed: 07/21/2023]
Abstract
Molecular interfacial structure greatly determines the properties of nano- and microscale systems. Vibrational sum frequency scattering (SFS) spectroscopy is a unique interface-selective tool to measure the interfacial vibrational spectrum of sub-micron to micron-scale objects dispersed in liquid and solid media. The interfacial structure is extracted from the interfacial susceptibility, a physical property derived from the intensity. Here, we describe the effect of infrared absorption that occurs in a bulk medium that is spectroscopically complex and use the results to investigate the effects of interfacial inversion, interfacial interference, and interfacial interference combined with absorption. We use the same three chemicals to do so, hexadecane oil, water, and a neutral Span80 surfactant. For all cases, the effective surface susceptibility can be retrieved from the intensity. We further find that inverting the phases results in different interfacial structures, even though they are composed of the same three chemicals, and explain this in terms of the different interactions that are necessary to stabilize the drops: steric stabilization for water drops in oil vs. charge stabilization for oil drops in water. Interfacial interference can be used to estimate the surface density of different compounds.
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Affiliation(s)
- S. Pullanchery
- Laboratory
for Fundamental BioPhotonics, Institute of Bioengineering (IBI), School
of Engineering (STI), École Polytechnique
Fédérale de Lausanne (EPFL), CH-1015 Lausanne, Switzerland
| | - L. Zhang
- Laboratory
for Fundamental BioPhotonics, Institute of Bioengineering (IBI), School
of Engineering (STI), École Polytechnique
Fédérale de Lausanne (EPFL), CH-1015 Lausanne, Switzerland
| | - S. Kulik
- Laboratory
for Fundamental BioPhotonics, Institute of Bioengineering (IBI), School
of Engineering (STI), École Polytechnique
Fédérale de Lausanne (EPFL), CH-1015 Lausanne, Switzerland
| | - S. Roke
- Laboratory
for Fundamental BioPhotonics, Institute of Bioengineering (IBI), School
of Engineering (STI), École Polytechnique
Fédérale de Lausanne (EPFL), CH-1015 Lausanne, Switzerland
- Institute
of Materials Science and Engineering (IMX), School of Engineering
(STI), École Polytechnique Fédérale
de Lausanne (EPFL), CH-1015 Lausanne, Switzerland
- Lausanne
Centre for Ultrafast Science, École
Polytechnique Fédérale de Lausanne (EPFL), CH-1015 Lausanne, Switzerland
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37
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Kumar Y, Dhami S, Pandey R. Theoretical study of electronic sum frequency generation spectroscopy to assess the buried interfaces. Biointerphases 2023; 18:041202. [PMID: 37417719 DOI: 10.1116/6.0002698] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2023] [Accepted: 06/13/2023] [Indexed: 07/08/2023] Open
Abstract
This article provides a comprehensive theoretical background of electronic sum frequency generation (ESFG), a second-order nonlinear spectroscopy technique. ESFG is utilized to investigate both exposed and buried interfaces, which are challenging to study using conventional spectroscopic methods. By overlapping two incident beams at the interface, ESFG generates a beam at the sum of their frequencies, allowing for the extraction of valuable interfacial molecular information such as molecular orientation and density of states present at interfaces. The unique surface selectivity of ESFG arises from the absence of inversion symmetry at the interfaces. However, detecting weak signals from interfaces requires the ultrafast lasers to generate a sufficiently strong signal. By understanding the theoretical foundations of ESFG presented in this article, readers can gain a solid grasp of the basics of ESFG spectroscopy.
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Affiliation(s)
- Yogesh Kumar
- Department of Chemistry, Indian Institute of Technology Roorkee, Haridwar 247667, Uttarakhand, India
| | - Suman Dhami
- Department of Chemistry, Indian Institute of Technology Roorkee, Haridwar 247667, Uttarakhand, India
| | - Ravindra Pandey
- Department of Chemistry, Indian Institute of Technology Roorkee, Haridwar 247667, Uttarakhand, India
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38
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Yan ECY, Perets EA, Konstantinovsky D, Hammes-Schiffer S. Detecting Interplay of Chirality, Water, and Interfaces for Elucidating Biological Functions. Acc Chem Res 2023; 56:1494-1504. [PMID: 37163574 PMCID: PMC10344471 DOI: 10.1021/acs.accounts.3c00088] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/12/2023]
Abstract
Chemists have long been fascinated by chirality, water, and interfaces, making tremendous progress in each research area. However, the chemistry emerging from the interplay of chirality, water, and interfaces has been difficult to study due to technical challenges, creating a barrier to elucidating biological functions at interfaces. Most biopolymers (proteins, DNA, and RNA) fold into macroscopic chiral structures to perform biological functions. Their folding requires water, but water behaves differently at interfaces where the bulk water hydrogen-bonding network terminates. A question arises as to how water molecules rearrange to minimize free energy at interfaces while stabilizing the macroscopic folding of biopolymers to support biological function. This question is central to solving many research challenges, including the molecular origin of biological homochirality, folding and insertion of proteins into cell membranes, and the design of heterogeneous biocatalysts. Researchers can resolve these challenges if they have the theoretical tools to accurately predict molecular behaviors of water and biopolymers at various interfaces. However, developing such tools requires validation by the experimental data. These experimental data are scarce because few physical methods can simultaneously distinguish chiral folding of the biopolymers, separate signals of interfaces from the overwhelming background of bulk solvent, and differentiate water in hydration shells of the polymers from water elsewhere.We recently illustrated these very capacities of chirality-sensitive vibrational sum frequency generation spectroscopy (chiral SFG). While chiral SFG theory dictates that the method is surface-specific under the condition of electronic nonresonance, we show the method can distinguish chiral folding of proteins and DNA and probe water structures in the first hydration shell of proteins at interfaces. Using amide I signals, we observe protein folding into β-sheets without background signals from α-helices and disordered structures at interfaces, thereby demonstrating the effect of 2D crowding on protein folding. Also, chiral SFG signals of C-H stretches are silent from single-stranded DNA, but prominent for canonical antiparallel duplexes as well as noncanonical parallel duplexes at interfaces, allowing for sensing DNA secondary structures and hybridization. In establishing chiral SFG for detecting protein hydration structures, we observe an H218O isotopic shift that reveals water contribution to the chiral SFG spectra. Additionally, the phase of the O-H stretching bands flips when the protein chirality is switched from L to D. These experimental results agree with our simulated chiral SFG spectra of water hydrating the β-sheet protein at the vacuum-water interface. The simulations further reveal that over 90% of the total chiral SFG signal comes from water in the first hydration shell. We conclude that the chiral SFG signals originate from achiral water molecules that assemble around the protein into a chiral supramolecular structure with chirality transferred from the protein. As water O-H stretches can reveal hydrogen-bonding interactions, chiral SFG shows promise in probing the structures and dynamics of water-biopolymer interactions at interfaces. Altogether, our work has created an experimental and computational framework for chiral SFG to elucidate biological functions at interfaces, setting the stage for probing the intricate chemical interplay of chirality, water, and interfaces.
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Affiliation(s)
- Elsa C. Y. Yan
- Department of Chemistry, Yale University, New Haven, CT 06520, USA
| | - Ethan A. Perets
- Department of Chemistry, Yale University, New Haven, CT 06520, USA
| | - Daniel Konstantinovsky
- Department of Chemistry, Yale University, New Haven, CT 06520, USA
- Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT 06520, USA
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39
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Maltseva D, Chatterjee S, Yu CC, Brzezinski M, Nagata Y, Gonella G, Murthy AC, Stachowiak JC, Fawzi NL, Parekh SH, Bonn M. Fibril formation and ordering of disordered FUS LC driven by hydrophobic interactions. Nat Chem 2023:10.1038/s41557-023-01221-1. [PMID: 37231298 PMCID: PMC10396963 DOI: 10.1038/s41557-023-01221-1] [Citation(s) in RCA: 16] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/24/2021] [Accepted: 04/25/2023] [Indexed: 05/27/2023]
Abstract
Biomolecular condensates, protein-rich and dynamic membrane-less organelles, play critical roles in a range of subcellular processes, including membrane trafficking and transcriptional regulation. However, aberrant phase transitions of intrinsically disordered proteins in biomolecular condensates can lead to the formation of irreversible fibrils and aggregates that are linked to neurodegenerative diseases. Despite the implications, the interactions underlying such transitions remain obscure. Here we investigate the role of hydrophobic interactions by studying the low-complexity domain of the disordered 'fused in sarcoma' (FUS) protein at the air/water interface. Using surface-specific microscopic and spectroscopic techniques, we find that a hydrophobic interface drives fibril formation and molecular ordering of FUS, resulting in solid-like film formation. This phase transition occurs at 600-fold lower FUS concentration than required for the canonical FUS low-complexity liquid droplet formation in bulk. These observations highlight the importance of hydrophobic effects for protein phase separation and suggest that interfacial properties drive distinct protein phase-separated structures.
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Affiliation(s)
- Daria Maltseva
- Max Planck Institute for Polymer Research, Mainz, Germany
| | - Sayantan Chatterjee
- Max Planck Institute for Polymer Research, Mainz, Germany
- Department of Biomedical Engineering, University of Texas at Austin, Austin, TX, USA
| | - Chun-Chieh Yu
- Max Planck Institute for Polymer Research, Mainz, Germany
| | - Mateusz Brzezinski
- Max Planck Institute for Polymer Research, Mainz, Germany
- Department of Biomedical Engineering, University of Texas at Austin, Austin, TX, USA
| | - Yuki Nagata
- Max Planck Institute for Polymer Research, Mainz, Germany
| | - Grazia Gonella
- Max Planck Institute for Polymer Research, Mainz, Germany
- Institute of Biochemistry and Bringing Materials to Life Initiative, ETH Zurich, Zürich, Switzerland
| | - Anastasia C Murthy
- Department of Molecular Biology, Cell Biology, and Biochemistry, Brown University, Providence, RI, USA
| | - Jeanne C Stachowiak
- Department of Biomedical Engineering, University of Texas at Austin, Austin, TX, USA
| | - Nicolas L Fawzi
- Department of Molecular Biology, Cell Biology, and Biochemistry, Brown University, Providence, RI, USA
| | - Sapun H Parekh
- Max Planck Institute for Polymer Research, Mainz, Germany.
- Department of Biomedical Engineering, University of Texas at Austin, Austin, TX, USA.
| | - Mischa Bonn
- Max Planck Institute for Polymer Research, Mainz, Germany.
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40
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Rozak H, Nihonyanagi S, Myalitsin A, Roy S, Ahmed M, Tahara T, Rzeznicka II. Adsorption of SARS-CoV-2 Spike (N501Y) RBD to Human Angiotensin-Converting Enzyme 2 at a Lipid/Water Interface. J Phys Chem B 2023; 127:4406-4414. [PMID: 37171105 DOI: 10.1021/acs.jpcb.3c00832] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/13/2023]
Abstract
The receptor binding domain (RBD) of spike proteins plays a crucial role in the process of severe acute respiratory syndrome corona virus 2 (SARS-CoV-2) attachment to the human angiotensin-converting enzyme 2 (ACE2). The N501Y mutation and later mutations introduced extra positive charges on the spike RBD and resulted in higher transmissibility, likely due to stronger binding with the highly negatively charged ACE2. Consequently, many studies have been devoted to understanding the molecular mechanism of spike protein binding with the ACE2 receptor. Most of the theoretical studies, however, have been done on isolated proteins. ACE2 is a transmembrane protein; thus, it is important to understand the interaction of spike proteins with ACE2 in a lipid matrix. In this study, the adsorption of ACE2 and spike (N501Y) RBD at a lipid/water interface was studied using the heterodyne-detected vibrational sum frequency generation (HD-VSFG) technique. The technique is a non-linear optical spectroscopy which measures vibrational spectra of molecules at an interface and provides information on their structure and orientation. It is found that ACE2 is effectively adsorbed at the positively charged 1,2-dipalmitoyl-3-trimethylammonium-propane (DPTAP) lipid monolayer via electrostatic interactions. The adsorption of ACE2 at the DPTAP monolayer causes a reorganization of interfacial water (D2O) from the D-down to the D-up orientation, indicating that the originally positively charged DPTAP interface becomes negatively charged due to ACE2 adsorption. The negatively charged interface (DPTAP/ACE2) allows further adsorption of positively charged spike RBD. HD-VSFG spectra in the amide I region show differences for spike (N501Y) RBD adsorbed at D2O, DPTAP, and DPTAP/ACE2 interfaces. A red shift observed for the spectra of spike RBD/DPTAP suggests that spike RBD oligomers are formed upon contact with DPTAP lipids.
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Affiliation(s)
- Harison Rozak
- College of Engineering, Shibaura Institute of Technology, Saitama City, Saitama 337-8570, Japan
| | - Satoshi Nihonyanagi
- Molecular Spectroscopy Laboratory, RIKEN, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan
- Ultrafast Spectroscopy Research Team, RIKEN Center for Advanced Photonics, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan
| | - Anton Myalitsin
- Molecular Spectroscopy Laboratory, RIKEN, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan
- ANVOS Analytics Co., 4-168 Motomachi, Naka-ku, Yokohama, Kanagawa 231-0861, Japan
| | - Subhadip Roy
- Molecular Spectroscopy Laboratory, RIKEN, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan
| | - Mohammed Ahmed
- Molecular Spectroscopy Laboratory, RIKEN, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan
- Ultrafast Spectroscopy Research Team, RIKEN Center for Advanced Photonics, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan
| | - Tahei Tahara
- Molecular Spectroscopy Laboratory, RIKEN, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan
- Ultrafast Spectroscopy Research Team, RIKEN Center for Advanced Photonics, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan
| | - Izabela I Rzeznicka
- College of Engineering, Shibaura Institute of Technology, Saitama City, Saitama 337-8570, Japan
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41
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Sanchez-Burgos I, Muniz MC, Espinosa JR, Panagiotopoulos AZ. A Deep Potential model for liquid-vapor equilibrium and cavitation rates of water. J Chem Phys 2023; 158:2889532. [PMID: 37158636 DOI: 10.1063/5.0144500] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2023] [Accepted: 03/30/2023] [Indexed: 05/10/2023] Open
Abstract
Computational studies of liquid water and its phase transition into vapor have traditionally been performed using classical water models. Here, we utilize the Deep Potential methodology-a machine learning approach-to study this ubiquitous phase transition, starting from the phase diagram in the liquid-vapor coexistence regime. The machine learning model is trained on ab initio energies and forces based on the SCAN density functional, which has been previously shown to reproduce solid phases and other properties of water. Here, we compute the surface tension, saturation pressure, and enthalpy of vaporization for a range of temperatures spanning from 300 to 600 K and evaluate the Deep Potential model performance against experimental results and the semiempirical TIP4P/2005 classical model. Moreover, by employing the seeding technique, we evaluate the free energy barrier and nucleation rate at negative pressures for the isotherm of 296.4 K. We find that the nucleation rates obtained from the Deep Potential model deviate from those computed for the TIP4P/2005 water model due to an underestimation in the surface tension from the Deep Potential model. From analysis of the seeding simulations, we also evaluate the Tolman length for the Deep Potential water model, which is (0.091 ± 0.008) nm at 296.4 K. Finally, we identify that water molecules display a preferential orientation in the liquid-vapor interface, in which H atoms tend to point toward the vapor phase to maximize the enthalpic gain of interfacial molecules. We find that this behavior is more pronounced for planar interfaces than for the curved interfaces in bubbles. This work represents the first application of Deep Potential models to the study of liquid-vapor coexistence and water cavitation.
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Affiliation(s)
- Ignacio Sanchez-Burgos
- Maxwell Centre, Cavendish Laboratory, Department of Physics, University of Cambridge, J J Thomson Avenue,Cambridge CB3 0HE, United Kingdom
- Department of Chemical and Biological Engineering, Princeton University, Princeton, New Jersey 08544, USA
| | - Maria Carolina Muniz
- Department of Chemical and Biological Engineering, Princeton University, Princeton, New Jersey 08544, USA
| | - Jorge R Espinosa
- Maxwell Centre, Cavendish Laboratory, Department of Physics, University of Cambridge, J J Thomson Avenue,Cambridge CB3 0HE, United Kingdom
- Departamento de Química Fisica, Facultad de Ciencias Químicas, Universidad Complutense de Madrid, 28040 Madrid, Spain
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42
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Chen S, Li Z, Voth GA. Acidic Conditions Impact Hydrophobe Transfer across the Oil-Water Interface in Unusual Ways. J Phys Chem B 2023; 127:3911-3918. [PMID: 37084419 PMCID: PMC10166083 DOI: 10.1021/acs.jpcb.3c00828] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/06/2023] [Revised: 04/09/2023] [Indexed: 04/23/2023]
Abstract
Molecular dynamics simulation and enhanced free energy sampling are used to study hydrophobic solute transfer across the water-oil interface with explicit consideration of the effect of different electrolytes: hydronium cation (hydrated excess proton) and sodium cation, both with chloride counterions (i.e., dissociated acid and salt, HCl and NaCl). With the Multistate Empirical Valence Bond (MS-EVB) methodology, we find that, surprisingly, hydronium can to a certain degree stabilize the hydrophobic solute, neopentane, in the aqueous phase and including at the oil-water interface. At the same time, the sodium cation tends to "salt out" the hydrophobic solute in the expected fashion. When it comes to the solvation structure of the hydrophobic solute in the acidic conditions, hydronium shows an affinity to the hydrophobic solute, as suggested by the radial distribution functions (RDFs). Upon consideration of this interfacial effect, we find that the solvation structure of the hydrophobic solute varies at different distances from the oil-liquid interface due to a competition between the bulk oil phase and the hydrophobic solute phase. Together with an observed orientational preference of the hydroniums and the lifetime of water molecules in the first solvation shell of neopentane, we conclude that hydronium stabilizes to a certain degree the dispersal of neopentane in the aqueous phase and eliminates any salting out effect in the acid solution; i.e., the hydronium acts like a surfactant. The present molecular dynamics study provides new insight into the hydrophobic solute transfer across the water-oil interface process, including for acid and salt solutions.
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Affiliation(s)
- Sijia Chen
- Department of Chemistry, Chicago Center
for Theoretical Chemistry, The James Franck Institute, and Institute
for Biophysical Dynamics, The University
of Chicago, Chicago, Illinois 60637, United States
| | - Zhefu Li
- Department of Chemistry, Chicago Center
for Theoretical Chemistry, The James Franck Institute, and Institute
for Biophysical Dynamics, The University
of Chicago, Chicago, Illinois 60637, United States
| | - Gregory A. Voth
- Department of Chemistry, Chicago Center
for Theoretical Chemistry, The James Franck Institute, and Institute
for Biophysical Dynamics, The University
of Chicago, Chicago, Illinois 60637, United States
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43
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Wei F, Urashima SH, Nihonyanagi S, Tahara T. Elucidation of the pH-Dependent Electric Double Layer Structure at the Silica/Water Interface Using Heterodyne-Detected Vibrational Sum Frequency Generation Spectroscopy. J Am Chem Soc 2023; 145:8833-8846. [PMID: 37068781 PMCID: PMC10143621 DOI: 10.1021/jacs.2c11344] [Citation(s) in RCA: 18] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2022] [Indexed: 04/19/2023]
Abstract
The silica/water interface is one of the most abundant charged interfaces in natural environments, and the elucidation of the water structure at the silica/water interface is essential. In the present study, we measured the interface-selective vibrational (χ(2)) spectra in the OH stretch region of the silica/water interface in a wide pH range of pH 2.0-12.0 while changing the salt concentration by heterodyne-detected vibrational sum-frequency generation spectroscopy. With the help of singular value decomposition analysis, it is shown that the imaginary part of the χ(2) (Imχ(2)) spectra can be decomposed into the spectra of the diffuse Gouy-Chapman layer (DL) and the compact Stern layer (SL), which enables us to quantitatively analyze the spectra of DL and SL separately. The salt-concentration dependence of the DL spectra at different pH values is analyzed using the modified Gouy-Chapman theory, and the pH-dependent surface charge density and the pKa value (4.8 ± 0.2) of the silica/water interface are evaluated. Furthermore, it is found that the pH-dependent change of the SL spectra is quantitatively explained by three spectral components that represent the three characteristic water species appearing in different pH regions in SL. The quantitative understanding obtained from the analysis of each spectral component in the Imχ(2) spectra provides a clear molecular-level picture of the electric double layer at the silica/water interface.
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Affiliation(s)
- Feng Wei
- Molecular
Spectroscopy Laboratory, RIKEN, Wako, Saitama 351-0198, Japan
| | - Shu-hei Urashima
- Molecular
Spectroscopy Laboratory, RIKEN, Wako, Saitama 351-0198, Japan
| | - Satoshi Nihonyanagi
- Molecular
Spectroscopy Laboratory, RIKEN, Wako, Saitama 351-0198, Japan
- Ultrafast
Spectroscopy Research Team, RIKEN Center
for Advanced Photonics (RAP), Wako, Saitama 351-0198, Japan
| | - Tahei Tahara
- Molecular
Spectroscopy Laboratory, RIKEN, Wako, Saitama 351-0198, Japan
- Ultrafast
Spectroscopy Research Team, RIKEN Center
for Advanced Photonics (RAP), Wako, Saitama 351-0198, Japan
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44
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Wang Y, Seki T, Liu X, Yu X, Yu CC, Domke KF, Hunger J, Koper MTM, Chen Y, Nagata Y, Bonn M. Direct Probe of Electrochemical Pseudocapacitive pH Jump at a Graphene Electrode. Angew Chem Int Ed Engl 2023; 62:e202216604. [PMID: 36592114 DOI: 10.1002/anie.202216604] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/10/2022] [Revised: 12/21/2022] [Accepted: 01/02/2023] [Indexed: 01/03/2023]
Abstract
Molecular-level insight into interfacial water at a buried electrode interface is essential in electrochemistry, but spectroscopic probing of the interface remains challenging. Here, using surface-specific heterodyne-detected sum-frequency generation (HD-SFG) spectroscopy, we directly access the interfacial water in contact with the graphene electrode supported on calcium fluoride (CaF2 ). We find phase transition-like variations of the HD-SFG spectra vs. applied potentials, which arises not from the charging/discharging of graphene but from the charging/discharging of the CaF2 substrate through the pseudocapacitive process. The potential-dependent spectra are nearly identical to the pH-dependent spectra, evidencing that the pseudocapacitive behavior is associated with a substantial local pH change induced by water dissociation between the CaF2 and graphene. Our work evidences the local molecular-level effects of pseudocapacitive charging at an electrode/aqueous electrolyte interface.
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Affiliation(s)
- Yongkang Wang
- School of Mechanical Engineering, Southeast University, 211189, Nanjing, China.,Max Planck Institute for Polymer Research, Ackermannweg 10, 55128, Mainz, Germany
| | - Takakazu Seki
- Max Planck Institute for Polymer Research, Ackermannweg 10, 55128, Mainz, Germany
| | - Xuan Liu
- Leiden Institute of Chemistry, Leiden University, Einsteinweg 55, 2333CC, Leiden (The, Netherlands
| | - Xiaoqing Yu
- Max Planck Institute for Polymer Research, Ackermannweg 10, 55128, Mainz, Germany
| | - Chun-Chieh Yu
- Max Planck Institute for Polymer Research, Ackermannweg 10, 55128, Mainz, Germany
| | - Katrin F Domke
- Max Planck Institute for Polymer Research, Ackermannweg 10, 55128, Mainz, Germany.,University Duisburg-Essen, Faculty of Chemistry, Universitätsstraße 5, 45141, Essen, Germany
| | - Johannes Hunger
- Max Planck Institute for Polymer Research, Ackermannweg 10, 55128, Mainz, Germany
| | - Marc T M Koper
- Leiden Institute of Chemistry, Leiden University, Einsteinweg 55, 2333CC, Leiden (The, Netherlands
| | - Yunfei Chen
- School of Mechanical Engineering, Southeast University, 211189, Nanjing, China
| | - Yuki Nagata
- Max Planck Institute for Polymer Research, Ackermannweg 10, 55128, Mainz, Germany
| | - Mischa Bonn
- Max Planck Institute for Polymer Research, Ackermannweg 10, 55128, Mainz, Germany
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45
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Sarkar S, Singh PC. Selective Action of Antimalarial Hydroxychloroquine on the Packing of Phospholipids and Interfacial Water Associated with Lysosomal Model Membranes: A Vibrational Sum Frequency Generation Study. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2023; 39:2435-2443. [PMID: 36735290 DOI: 10.1021/acs.langmuir.2c03321] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/18/2023]
Abstract
Understanding the structural change of lysosomal membranes induced by hydroxychloroquine (HCQ) drug is essential as it has been considered as one of the probable mechanisms of its antimalarial action. In this context, vibrational sum frequency generation (VSFG) spectra of the O-H region of water and C-H of the hydrocarbon chain of negatively charged and zwitterionic phospholipids associated with the lysosomal membrane in the absence and presence of different concentrations of HCQ have been measured at the air/water interface. The interfacial water at the negatively charged and zwitterionic lipids gets restructured in the presence of HCQ; however, the mechanism of restructuring is different due to the charge of the head groups of lipids. Interestingly, the presence of HCQ leads to a disorder in the negatively charged lipids, irrespective of their chemical nature, mainly by creating the gauche defect in the hydrocarbon chain of the lipid. In contrast, the ordering of the zwitterionic lipid does not show any appreciable change with the addition of HCQ. The finding on the selectivity of HCQ in affecting the ordering of the lipid depending on its head group charge and restructuring of interfacial water may be useful in understanding the molecular level mechanism of the antimalarial action of HCQ.
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Affiliation(s)
- Sunipa Sarkar
- School of Chemical Sciences, Indian Association for the Cultivation of Science, Kolkata700032, India
| | - Prashant Chandra Singh
- School of Chemical Sciences, Indian Association for the Cultivation of Science, Kolkata700032, India
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46
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Piontek S, Naujoks D, Tabassum T, DelloStritto MJ, Jaugstetter M, Hosseini P, Corva M, Ludwig A, Tschulik K, Klein ML, Petersen PB. Probing the Gold/Water Interface with Surface-Specific Spectroscopy. ACS PHYSICAL CHEMISTRY AU 2023; 3:119-129. [PMID: 36718265 PMCID: PMC9881240 DOI: 10.1021/acsphyschemau.2c00044] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/07/2022] [Revised: 12/08/2022] [Accepted: 12/08/2022] [Indexed: 01/05/2023]
Abstract
Water is an integral component in electrochemistry, in the generation of the electric double layer, and in the propagation of the interfacial electric fields into the solution; however, probing the molecular-level structure of interfacial water near functioning electrode surfaces remains challenging. Due to the surface-specificity, sum-frequency-generation (SFG) spectroscopy offers an opportunity to investigate the structure of water near working electrochemical interfaces but probing the hydrogen-bonded structure of water at this buried electrode-electrolyte interface was thought to be impossible. Propagating the laser beams through the solvent leads to a large attenuation of the infrared light due to the absorption of water, and interrogating the interface by sending the laser beams through the electrode normally obscures the SFG spectra due to the large nonlinear response of conduction band electrons. Here, we show that the latter limitation is removed when the gold layer is thin. To demonstrate this, we prepared Au gradient films on CaF2 with a thickness between 0 and 8 nm. SFG spectra of the Au gradient films in contact with H2O and D2O demonstrate that resonant water SFG spectra can be obtained using Au films with a thickness of ∼2 nm or less. The measured spectra are distinctively different from the frequency-dependent Fresnel factors of the interface, suggesting that the features we observe in the OH stretching region indeed do not arise from the nonresonant response of the Au films. With the newfound ability to probe interfacial solvent structure at electrode/aqueous interfaces, we hope to provide insights into more efficient electrolyte composition and electrode design.
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Affiliation(s)
- Stefan
M. Piontek
- Faculty
of Chemistry and Biochemistry, Ruhr-Universität
Bochum, 44801 Bochum, Germany,Light
Conversion Inc., Vilnius City Municipality, Vilnius 10234, Lithuania
| | - Dennis Naujoks
- Faculty
of Mechanical Engineering, Institute for Materials and ZGH, Ruhr-Universität Bochum, 44801 Bochum, Germany
| | - Tadneem Tabassum
- Faculty
of Chemistry and Biochemistry, Ruhr-Universität
Bochum, 44801 Bochum, Germany
| | - Mark J. DelloStritto
- Institute
for Computational Molecular Science, Temple
University, Philadelphia, 19122 Pennsylvania, United States
| | | | - Pouya Hosseini
- Max-Planck-Institut
für Eisenforschung GmbH, 40237 Düsseldorf, Germany
| | - Manuel Corva
- Faculty
of Chemistry and Biochemistry, Ruhr-Universität
Bochum, 44801 Bochum, Germany
| | - Alfred Ludwig
- Faculty
of Mechanical Engineering, Institute for Materials and ZGH, Ruhr-Universität Bochum, 44801 Bochum, Germany
| | - Kristina Tschulik
- Faculty
of Chemistry and Biochemistry, Ruhr-Universität
Bochum, 44801 Bochum, Germany
| | - Michael L. Klein
- Institute
for Computational Molecular Science, Temple
University, Philadelphia, 19122 Pennsylvania, United States
| | - Poul B. Petersen
- Faculty
of Chemistry and Biochemistry, Ruhr-Universität
Bochum, 44801 Bochum, Germany,
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47
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Das B, Chandra A. Vibrational Sum Frequency Generation Spectra of Water-Vapor Interfaces Covered by Alcohols: Effects of Surface Coverage and Coupling between Oscillators. Chemphyschem 2022; 24:e202200604. [PMID: 36537178 DOI: 10.1002/cphc.202200604] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/13/2022] [Revised: 12/18/2022] [Accepted: 12/20/2022] [Indexed: 12/24/2022]
Abstract
The present study deals with the effects of varying coverage of water surface by alcohols on the vibrational sum frequency generation (VSFG) spectrum of interfacial water. We have considered two different alcohols: Tertiary butyl alcohol (TBA) whose alkyl part is fully branched and stearyl alcohol (STA) which has a long linear alkyl chain with larger hydrophobic surface area than that of TBA. With increase of the alcohol concentration, the hydrogen bonded OH stretch region of the VSFG spectrum is found to change following a regular trend for the STA-water system, whereas non-monotonic variation of the VSFG spectrum is observed for the TBA-water system which can be correlated with the presence of very different interactions of TBA molecules at different concentrations. On increasing the concentration of TBA, the hydrophobic groups get more tilted towards the water phase and significant hydrophobic interactions are introduced at higher concentrations. Whereas, for STA, there is a gradual increase in the hydrophilic interaction. Because of stacking interactions between the long chain alkyl groups, the hydrophobic parts stay outward from the water phase at higher concentrations and a regular change in the VSFG spectrum is observed. We have also presented a computationally efficient scheme to calculate the VSFG spectrum of interfacial systems for coupled oscillators which is expected to be beneficial for the treatment of coupling where the interfacial system size is inherently large.
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Affiliation(s)
- Banshi Das
- Lehrstuhl für Theoretische Chemie, Ruhr-Universität Bochum, 44780, Bochum, Germany
| | - Amalendu Chandra
- Department of Chemistry, Indian Institute of Technology Kanpur, Kanpur, India, 208016
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48
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Sustainable organic synthesis promoted on titanium dioxide using coordinated water and renewable energies/resources. Coord Chem Rev 2022. [DOI: 10.1016/j.ccr.2022.214773] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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Krzan M, Rey NG, Jarek E, Czakaj A, Santini E, Ravera F, Liggieri L, Warszynski P, Braunschweig B. Surface Properties of Saponin-Chitosan Mixtures. Molecules 2022; 27:7505. [PMID: 36364333 PMCID: PMC9658537 DOI: 10.3390/molecules27217505] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2022] [Revised: 10/25/2022] [Accepted: 10/26/2022] [Indexed: 08/03/2024] Open
Abstract
The surface properties of saponin and saponin-chitosan mixtures were analysed as a function of their bulk mixing ratio using vibrational sum-frequency generation (SFG), surface tensiometry and dilational rheology measurements. Our experiments show that saponin-chitosan mixtures present some remarkable properties, such as a strong amphiphilicity of the saponin and high dilational viscoelasticity. We believe this points to the presence of chitosan in the adsorption layer, despite its complete lack of surface activity. We explain this phenomenon by electrostatic interactions between the saponin as an anionic surfactant and chitosan as a polycation, leading to surface-active saponin-chitosan complexes and aggregates. Analysing the SFG intensity of the O-H stretching bands from interfacial water molecules, we found that in the case of pH 3.4 for a mixture consisting of 0.1 g/L saponin and 0.001 g/L chitosan, the adsorption layer was electrically neutral. This conclusion from SFG spectra is corroborated by results from surface tensiometry showing a significant reduction in surface tension and effects on the dilational surface elasticity strictly at saponin/chitosan ratios, where SFG spectra indicate zero net charge at the air-water interface.
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Affiliation(s)
- Marcel Krzan
- Jerzy Haber Institute of Catalysis and Surface Chemistry, Polish Academy of Sciences, ul. Niezapominajek 8, 30-239 Krakow, Poland
| | - Natalia García Rey
- Institute of Physical Chemistry and Center for Soft Nanoscience, Westfälische Wilhelms-Universität Münster, Corrensstraße 28/30, 48149 Münster, Germany
| | - Ewelina Jarek
- Jerzy Haber Institute of Catalysis and Surface Chemistry, Polish Academy of Sciences, ul. Niezapominajek 8, 30-239 Krakow, Poland
| | - Agnieszka Czakaj
- Jerzy Haber Institute of Catalysis and Surface Chemistry, Polish Academy of Sciences, ul. Niezapominajek 8, 30-239 Krakow, Poland
| | - Eva Santini
- Institute of Condensed Matter and Technologies for Energy, Consiglio Nazionale delle Ricerche, Via Marini 6, 16149 Genova, Italy
| | - Francesca Ravera
- Institute of Condensed Matter and Technologies for Energy, Consiglio Nazionale delle Ricerche, Via Marini 6, 16149 Genova, Italy
| | - Libero Liggieri
- Institute of Condensed Matter and Technologies for Energy, Consiglio Nazionale delle Ricerche, Via Marini 6, 16149 Genova, Italy
| | - Piotr Warszynski
- Jerzy Haber Institute of Catalysis and Surface Chemistry, Polish Academy of Sciences, ul. Niezapominajek 8, 30-239 Krakow, Poland
| | - Björn Braunschweig
- Institute of Physical Chemistry and Center for Soft Nanoscience, Westfälische Wilhelms-Universität Münster, Corrensstraße 28/30, 48149 Münster, Germany
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Nagatsuka N, Shibata N, Muratani T, Watanabe K. Proton Configuration in Water Chain on Pt(533). J Phys Chem Lett 2022; 13:7660-7666. [PMID: 35959992 DOI: 10.1021/acs.jpclett.2c01378] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
Abstract
In this paper, a wetting behavior of Pt(533) is studied by using heterodyne-detected vibrational sum-frequency generation spectroscopy under an ultrahigh-vacuum condition at 145 K. The imaginary parts of the surface nonlinear susceptibility (Imχ(2)) of the H-bonded OH stretching region are successfully obtained for submonolayer water coverage that show negative bands indicating H-down (proton pointing to the substrate) configurations both for the water at the step and at the terrace. The growth manner of the Imχ(2) signal with coverage and the results of an isotopic dilution are consistent with a model in which a one-dimensional (1D) chain at the step forms a "zigzag" structure that contains H-down orientations. This finding resolves the previous controversy in the literature concerning the proton configuration in the 1D water chain at the step.
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Affiliation(s)
- Naoki Nagatsuka
- Department of Chemistry, Graduate School of Science, Kyoto University, Kyoto 606-8502, Japan
| | - Noboru Shibata
- Department of Chemistry, Graduate School of Science, Kyoto University, Kyoto 606-8502, Japan
| | - Toya Muratani
- Department of Chemistry, Graduate School of Science, Kyoto University, Kyoto 606-8502, Japan
| | - Kazuya Watanabe
- Department of Chemistry, Graduate School of Science, Kyoto University, Kyoto 606-8502, Japan
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