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De Micco V, Aronne G, Caplin N, Carnero-Diaz E, Herranz R, Horemans N, Legué V, Medina FJ, Pereda-Loth V, Schiefloe M, De Francesco S, Izzo LG, Le Disquet I, Kittang Jost AI. Perspectives for plant biology in space and analogue environments. NPJ Microgravity 2023; 9:67. [PMID: 37604914 PMCID: PMC10442387 DOI: 10.1038/s41526-023-00315-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/10/2022] [Accepted: 08/02/2023] [Indexed: 08/23/2023] Open
Abstract
Advancements in plant space biology are required for the realization of human space exploration missions, where the re-supply of resources from Earth is not feasible. Until a few decades ago, space life science was focused on the impact of the space environment on the human body. More recently, the interest in plant space biology has increased because plants are key organisms in Bioregenerative Life Support Systems (BLSS) for the regeneration of resources and fresh food production. Moreover, plants play an important role in psychological support for astronauts. The definition of cultivation requirements for the design, realization, and successful operation of BLSS must consider the effects of space factors on plants. Altered gravitational fields and radiation exposure are the main space factors inducing changes in gene expression, cell proliferation and differentiation, signalling and physiological processes with possible consequences on tissue organization and organogenesis, thus on the whole plant functioning. Interestingly, the changes at the cellular and molecular levels do not always result in organismic or developmental changes. This apparent paradox is a current research challenge. In this paper, the main findings of gravity- and radiation-related research on higher plants are summarized, highlighting the knowledge gaps that are still necessary to fill. Existing experimental facilities to simulate the effect of space factors, as well as requirements for future facilities for possible experiments to achieve fundamental biology goals are considered. Finally, the need for making synergies among disciplines and for establishing global standard operating procedures for analyses and data collection in space experiments is highlighted.
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Affiliation(s)
- Veronica De Micco
- Department of Agricultural Sciences, University of Naples Federico II, via Università 100, 80055, Portici (NA), Italy.
| | - Giovanna Aronne
- Department of Agricultural Sciences, University of Naples Federico II, via Università 100, 80055, Portici (NA), Italy
| | - Nicol Caplin
- SciSpacE Team, Directorate of Human and Robotic Exploration Programmes, European Space Agency (ESA), Noordwijk, Netherlands
| | - Eugénie Carnero-Diaz
- Institute of Systematic, Evolution, Biodiversity, Sorbonne University, National Museum of Natural History, CNRS, EPHE, UA, 45, rue Buffon CP50, 75005, Paris, France
| | - Raúl Herranz
- Centro de Investigaciones Biológicas Margarita Salas - CSIC, Ramiro de Maeztu 9, 28040, Madrid, Spain
| | - Nele Horemans
- Belgian Nuclear Research Centre (SCK CEN), Biosphere Impact Studies (BIS), Boeretang 200, 2400, Mol, Belgium
| | - Valérie Legué
- Université Clermont Auvergne, INRAE, PIAF, F-63000, Clermont-Ferrand, France
| | - F Javier Medina
- Centro de Investigaciones Biológicas Margarita Salas - CSIC, Ramiro de Maeztu 9, 28040, Madrid, Spain
| | | | - Mona Schiefloe
- NTNU Social Research, Centre for Interdisciplinary Research in Space (CIRiS) Dragvoll Allé 38 B, 7049, Trondheim, Norway
| | - Sara De Francesco
- Department of Agricultural Sciences, University of Naples Federico II, via Università 100, 80055, Portici (NA), Italy
| | - Luigi Gennaro Izzo
- Department of Agricultural Sciences, University of Naples Federico II, via Università 100, 80055, Portici (NA), Italy
| | - Isabel Le Disquet
- Institute of Systematic, Evolution, Biodiversity, Sorbonne University, National Museum of Natural History, CNRS, EPHE, UA, 45, rue Buffon CP50, 75005, Paris, France
| | - Ann- Iren Kittang Jost
- NTNU Social Research, Centre for Interdisciplinary Research in Space (CIRiS) Dragvoll Allé 38 B, 7049, Trondheim, Norway
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Romanowska-Duda Z, Piotrowski K, Stępiński D, Popłońska K. A Promising Ash Supplementation Strategy in the Cultivation of Spirodela polyrrhiza Plants. Cells 2023; 12:289. [PMID: 36672224 PMCID: PMC9856745 DOI: 10.3390/cells12020289] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/03/2022] [Revised: 01/05/2023] [Accepted: 01/09/2023] [Indexed: 01/15/2023] Open
Abstract
An innovative approach to the management of waste in the form of ash obtained during biomass combustion is justified due to its specific properties, including the presence of macro- and microelements. The aim of the current study was to determine the concentration of ash obtained from Sorghum combustion regarding its fertilizer value and its effect on the cytological structures, physiological parameters, growth and development of Lemnaceae plants, thereby demonstrating the possibility of using this waste to supplement culture media. The analyses showed that the use of ash in the in vitro cultivation of Lemnaceae aquatic plants had a dose-dependent effect. The addition of 2% ash favorably affected the condition of plant roots, i.e., meristem elongation and an increase in nucleoli sizes as well as improving the chlorophyll content index, gas exchange parameters, chemical oxygen demand (COD) and plant vigor via PSII, which was confirmed by a chlorophyll fluorescence measurement. On the other hand, too high of a concentration, i.e., 10% ash, adversely affected the plant development and parameters studied. Concluding, the use of ash at a low concentration favorably affected the yielding of Spirodela polyrrhiza, whose biomass can be used for energy purposes in the production of bioethanol, plant biogas or the phytoremediation of industrial waters and leachate.
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Affiliation(s)
- Zdzisława Romanowska-Duda
- Department of Plant Ecophysiology, Faculty of Biology and Environmental Protection, University of Lodz, Banacha 12/16, 92-237 Lodz, Poland
| | - Krzysztof Piotrowski
- Department of Plant Ecophysiology, Faculty of Biology and Environmental Protection, University of Lodz, Banacha 12/16, 92-237 Lodz, Poland
| | - Dariusz Stępiński
- Department of Cytophysiology, Faculty of Biology and Environmental Protection, University of Lodz, Pomorska 141/143, 90-236 Lodz, Poland
| | - Katarzyna Popłońska
- Department of Cytophysiology, Faculty of Biology and Environmental Protection, University of Lodz, Pomorska 141/143, 90-236 Lodz, Poland
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Hosamani R, Swamy BK, Dsouza A, Sathasivam M. Plant responses to hypergravity: a comprehensive review. PLANTA 2022; 257:17. [PMID: 36534189 DOI: 10.1007/s00425-022-04051-6] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/27/2022] [Accepted: 12/10/2022] [Indexed: 06/17/2023]
Abstract
Hypergravity is an effective novel stimulus to elucidate plant gravitational and mechanobiological behaviour. Here, we review the current understanding of phenotypic, physio-biochemical, and molecular plant responses to simulated hypergravity. Plants readily respond to altered gravity conditions, such as microgravity or hypergravity. Hypergravity-a gravitational force higher than that on the Earth's surface (> 1g)-can be simulated using centrifuges. Exposing seeds, seedlings, or plant cell cultures to hypergravity elicits characteristic morphological, physio-biochemical, and molecular changes. While several studies have provided insights into plant responses and underlying mechanisms, much is still elusive, including the interplay of hypergravity with gravitropism. Moreover, hypergravity is of great significance for mechano- and space/gravitational biologists to elucidate fundamental plant behaviour. In this review, we provide an overview of the phenotypic, physiological, biochemical, and molecular responses of plants to hypergravity. We then discuss the involvement of hypergravity in plant gravitropism-the directional growth along the gravity vector. Finally, we highlight future research directions to expand our understanding of hypergravity in plant biology.
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Affiliation(s)
- Ravikumar Hosamani
- Institute of Agricultural Biotechnology (IABT), University of Agricultural Sciences, Dharwad, 580005, India.
| | - Basavalingayya K Swamy
- Institute of Agricultural Biotechnology (IABT), University of Agricultural Sciences, Dharwad, 580005, India
| | - Ajwal Dsouza
- Controlled Environment Systems Research Facility, School of Environmental Sciences, University of Guelph, 50 Stone Road East, Guelph, ON, N1G 2W1, Canada
| | - Malarvizhi Sathasivam
- Institute of Agricultural Biotechnology (IABT), University of Agricultural Sciences, Dharwad, 580005, India
- College of Agriculture, Forestry and Life Sciences, Clemson University, Clemson, South Carolina, USA
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Red Light Enhances Plant Adaptation to Spaceflight and Mars g-Levels. Life (Basel) 2022; 12:life12101484. [PMID: 36294919 PMCID: PMC9605285 DOI: 10.3390/life12101484] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/25/2022] [Revised: 09/14/2022] [Accepted: 09/20/2022] [Indexed: 12/15/2022] Open
Abstract
Understanding how plants respond and adapt to extraterrestrial conditions is essential for space exploration initiatives. Deleterious effects of the space environment on plant development have been reported, such as the unbalance of cell growth and proliferation in the root meristem, or gene expression reprogramming. However, plants are capable of surviving and completing the seed-to-seed life cycle under microgravity. A key research challenge is to identify environmental cues, such as light, which could compensate the negative effects of microgravity. Understanding the crosstalk between light and gravity sensing in space was the major objective of the NASA-ESA Seedling Growth series of spaceflight experiments (2013–2018). Different g-levels were used, with special attention to micro-g, Mars-g, and Earth-g. In spaceflight seedlings illuminated for 4 days with a white light photoperiod and then photostimulated with red light for 2 days, transcriptomic studies showed, first, that red light partially reverted the gene reprogramming induced by microgravity, and that the combination of microgravity and photoactivation was not recognized by seedlings as stressful. Two mutant lines of the nucleolar protein nucleolin exhibited differential requirements in response to red light photoactivation. This observation opens the way to directed-mutagenesis strategies in crop design to be used in space colonization. Further transcriptomic studies at different g-levels showed elevated plastid and mitochondrial genome expression in microgravity, associated with disturbed nucleus–organelle communication, and the upregulation of genes encoding auxin and cytokinin hormonal pathways. At the Mars g-level, genes of hormone pathways related to stress response were activated, together with some transcription factors specifically related to acclimation, suggesting that seedlings grown in partial-g are able to acclimate by modulating genome expression in routes related to space-environment-associated stress.
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Use of Reduced Gravity Simulators for Plant Biological Studies. Methods Mol Biol 2021; 2368:241-265. [PMID: 34647260 DOI: 10.1007/978-1-0716-1677-2_16] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/17/2023]
Abstract
Simulated microgravity and partial gravity research on Earth is a necessary complement to space research in real microgravity due to limitations of access to spaceflight. However, the use of ground-based facilities for reduced gravity simulation is far from simple. Microgravity simulation usually results in the need to consider secondary effects that appear in the generation of altered gravity. These secondary effects may interfere with gravity alteration in the changes observed in the biological processes under study. In addition to microgravity simulation, ground-based facilities are also capable of generating hypergravity or fractional gravity conditions whose effects on biological systems are worth being tested and compared with the results of microgravity exposure. Multiple technologies (2D clinorotation, random positioning machines, magnetic levitators, or centrifuges) and experimental hardware (different containers and substrates for seedlings or cell cultures) are available for these studies. Experimental requirements should be collectively and carefully considered in defining the optimal experimental design, taking into account that some environmental parameters, or life-support conditions, could be difficult to be provided in certain facilities. Using simulation facilities will allow us to anticipate, modify, or redefine the findings provided by the scarce available spaceflight opportunities.
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Manzano A, Pereda-Loth V, de Bures A, Sáez-Vásquez J, Herranz R, Medina FJ. Light signals counteract alterations caused by simulated microgravity in proliferating plant cells. AMERICAN JOURNAL OF BOTANY 2021; 108:1775-1792. [PMID: 34524692 DOI: 10.1002/ajb2.1728] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/23/2020] [Revised: 04/18/2021] [Accepted: 04/20/2021] [Indexed: 06/13/2023]
Abstract
PREMISE Light and gravity are fundamental cues for plant development. Our understanding of the effects of light stimuli on plants in space, without gravity, is key to providing conditions for plants to acclimate to the environment. Here we tested the hypothesis that the alterations caused by the absence of gravity in root meristematic cells can be counteracted by light. METHODS Seedlings of wild-type Arabidopsis thaliana and two mutants of the essential nucleolar protein nucleolin (nuc1, nuc2) were grown in simulated microgravity, either under a white light photoperiod or under continuous darkness. Key variables of cell proliferation (cell cycle regulation), cell growth (ribosome biogenesis), and auxin transport were measured in the root meristem using in situ cellular markers and transcriptomic methods and compared with those of a 1 g control. RESULTS The incorporation of a photoperiod regime was sufficient to attenuate or suppress the effects caused by gravitational stress at the cellular level in the root meristem. In all cases, values for variables recorded from samples receiving light stimuli in simulated microgravity were closer to values from the controls than values from samples grown in darkness. Differential sensitivities were obtained for the two nucleolin mutants. CONCLUSIONS Light signals may totally or partially replace gravity signals, significantly improving plant growth and development in microgravity. Despite that, molecular alterations are still compatible with the expected acclimation mechanisms, which need to be better understood. The differential sensitivity of nuc1 and nuc2 mutants to gravitational stress points to new strategies to produce more resilient plants to travel with humans in new extraterrestrial endeavors.
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Affiliation(s)
- Aránzazu Manzano
- Centro de Investigaciones Biológicas Margarita Salas - CSIC, Ramiro de Maeztu 9, Madrid, 28040, Spain
| | | | - Anne de Bures
- CNRS, Laboratoire Génome et Développement des Plantes (LGDP), UMR 5096, Perpignan, 66860, France
- Université de Perpignan Via Domitia, LGDP, UMR 5096, Perpignan, 66860, France
| | - Julio Sáez-Vásquez
- CNRS, Laboratoire Génome et Développement des Plantes (LGDP), UMR 5096, Perpignan, 66860, France
- Université de Perpignan Via Domitia, LGDP, UMR 5096, Perpignan, 66860, France
| | - Raúl Herranz
- Centro de Investigaciones Biológicas Margarita Salas - CSIC, Ramiro de Maeztu 9, Madrid, 28040, Spain
| | - F Javier Medina
- Centro de Investigaciones Biológicas Margarita Salas - CSIC, Ramiro de Maeztu 9, Madrid, 28040, Spain
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Sathasivam M, Hosamani R, K Swamy B, Kumaran G S. Plant responses to real and simulated microgravity. LIFE SCIENCES IN SPACE RESEARCH 2021; 28:74-86. [PMID: 33612182 DOI: 10.1016/j.lssr.2020.10.001] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/06/2020] [Revised: 09/22/2020] [Accepted: 10/07/2020] [Indexed: 06/12/2023]
Abstract
Plant biology experiments in real and simulated microgravity have significantly contributed to our understanding of physiology and behavior of plants. How do plants perceive microgravity? How that perception translates into stimulus? And in turn plant's response and adaptation to microgravity through physiological, cellular, and molecular changes have been reasonably well documented in the literature. Knowledge gained through these plant biology experiments in microgravity helped to successfully cultivate crops in space. For instance, salad crop such as red romaine lettuce grown on the International Space Station (ISS) is allowed to incorporate into the crew's supplementary diet. However, the use of plants as a sustainable bio-regenerative life support system (BLSS) to produce fresh food and O2, reduce CO2 level, recycle metabolic waste, and efficient water management for long-duration space exploration missions requires critical gap filling research. Hence, it is inevitable to reflect and review plant biology microgravity research findings time and again with a new set of data available in the literature. With that in focus, the current article discusses phenotypic, physiological, biochemical, cell cycle, cell wall changes and molecular responses of plants to microgravity both in real and simulated conditions with the latest literature.
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Affiliation(s)
- Malarvizhi Sathasivam
- Institute of Agricultural Biotechnology (IABT), University of Agricultural Sciences, Dharwad, Karnataka, 580005, India
| | - Ravikumar Hosamani
- Institute of Agricultural Biotechnology (IABT), University of Agricultural Sciences, Dharwad, Karnataka, 580005, India.
| | - Basavalingayya K Swamy
- Institute of Agricultural Biotechnology (IABT), University of Agricultural Sciences, Dharwad, Karnataka, 580005, India
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Villacampa A, Ciska M, Manzano A, Vandenbrink JP, Kiss JZ, Herranz R, Medina FJ. From Spaceflight to Mars g-Levels: Adaptive Response of A. Thaliana Seedlings in a Reduced Gravity Environment Is Enhanced by Red-Light Photostimulation. Int J Mol Sci 2021; 22:E899. [PMID: 33477454 PMCID: PMC7830483 DOI: 10.3390/ijms22020899] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2020] [Revised: 01/10/2021] [Accepted: 01/14/2021] [Indexed: 12/31/2022] Open
Abstract
The response of plants to the spaceflight environment and microgravity is still not well understood, although research has increased in this area. Even less is known about plants' response to partial or reduced gravity levels. In the absence of the directional cues provided by the gravity vector, the plant is especially perceptive to other cues such as light. Here, we investigate the response of Arabidopsis thaliana 6-day-old seedlings to microgravity and the Mars partial gravity level during spaceflight, as well as the effects of red-light photostimulation by determining meristematic cell growth and proliferation. These experiments involve microscopic techniques together with transcriptomic studies. We demonstrate that microgravity and partial gravity trigger differential responses. The microgravity environment activates hormonal routes responsible for proliferation/growth and upregulates plastid/mitochondrial-encoded transcripts, even in the dark. In contrast, the Mars gravity level inhibits these routes and activates responses to stress factors to restore cell growth parameters only when red photostimulation is provided. This response is accompanied by upregulation of numerous transcription factors such as the environmental acclimation-related WRKY-domain family. In the long term, these discoveries can be applied in the design of bioregenerative life support systems and space farming.
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Affiliation(s)
- Alicia Villacampa
- Centro de Investigaciones Biológicas Margarita Salas (CSIC), Ramiro de Maeztu 9, 28040 Madrid, Spain; (A.V.); (M.C.); (A.M.)
| | - Malgorzata Ciska
- Centro de Investigaciones Biológicas Margarita Salas (CSIC), Ramiro de Maeztu 9, 28040 Madrid, Spain; (A.V.); (M.C.); (A.M.)
| | - Aránzazu Manzano
- Centro de Investigaciones Biológicas Margarita Salas (CSIC), Ramiro de Maeztu 9, 28040 Madrid, Spain; (A.V.); (M.C.); (A.M.)
| | | | - John Z. Kiss
- Department of Biology, University of North Carolina-Greensboro, Greensboro, NC 27402, USA;
| | - Raúl Herranz
- Centro de Investigaciones Biológicas Margarita Salas (CSIC), Ramiro de Maeztu 9, 28040 Madrid, Spain; (A.V.); (M.C.); (A.M.)
| | - F. Javier Medina
- Centro de Investigaciones Biológicas Margarita Salas (CSIC), Ramiro de Maeztu 9, 28040 Madrid, Spain; (A.V.); (M.C.); (A.M.)
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Ambastha V, Leshem Y. Cyclin B1;1 activity is observed in lateral roots but not in the primary root during lethal salinity and salt stress recovery. PLANT SIGNALING & BEHAVIOR 2020; 15:1776026. [PMID: 32564656 PMCID: PMC8570749 DOI: 10.1080/15592324.2020.1776026] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/24/2020] [Revised: 05/25/2020] [Accepted: 05/26/2020] [Indexed: 06/07/2023]
Abstract
Earlier, we reported that Arabidopsis young lateral roots (LR) exhibited improved lethal salinity tolerance as compared with the primary root (PR). We have shown that cell death processes which take place in the PR during salt stress are postponed in the LR. Still, very little is known about the regulation of cell survival mechanisms in the LR during salinity stress. Here we used transgenic Arabidopsis plants expressing Cyclin B1;1:GUS, to further study the responses to salinity in the PR and LR positions. We found strong Cyclin B1;1:GUS activity in young budding LR of salt stressed and stress recovered plants. The Cyclin B1;1:GUS activity dropped significantly in long LR and was almost completely abolished in the PR. Our data provides another line of evidence that position-dependent response occurs in Arabidopsis roots during lethal salinity. The possible roles Cyclin B1;1 plays in the young LR during the response to lethal salinity are discussed.
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Affiliation(s)
- Vivek Ambastha
- Department of Plant Sciences, MIGAL - Galilee Research Institute, Kiryat-Shmona, Israel
| | - Yehoram Leshem
- Department of Plant Sciences, MIGAL - Galilee Research Institute, Kiryat-Shmona, Israel
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Vandenbrink JP, Herranz R, Poehlman WL, Alex Feltus F, Villacampa A, Ciska M, Javier Medina F, Kiss JZ. RNA-seq analyses of Arabidopsis thaliana seedlings after exposure to blue-light phototropic stimuli in microgravity. AMERICAN JOURNAL OF BOTANY 2019; 106:1466-1476. [PMID: 31709515 DOI: 10.1002/ajb2.1384] [Citation(s) in RCA: 32] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/09/2019] [Accepted: 09/17/2019] [Indexed: 05/04/2023]
Abstract
PREMISE Plants synthesize information from multiple environmental stimuli when determining their direction of growth. Gravity, being ubiquitous on Earth, plays a major role in determining the direction of growth and overall architecture of the plant. Here, we utilized the microgravity environment on board the International Space Station (ISS) to identify genes involved influencing growth and development of phototropically stimulated seedlings of Arabidopsis thaliana. METHODS Seedlings were grown on the ISS, and RNA was extracted from 7 samples (pools of 10-15 plants) grown in microgravity (μg) or Earth gravity conditions (1-g). Transcriptomic analyses via RNA sequencing (RNA-seq) of differential gene expression was performed using the HISAT2-Stringtie-DESeq2 RNASeq pipeline. Differentially expressed genes were further characterized by using Pathway Analysis and enrichment for Gene Ontology classifications. RESULTS For 296 genes that were found significantly differentially expressed between plants in microgravity compared to 1-g controls, Pathway Analysis identified eight molecular pathways that were significantly affected by reduced gravity conditions. Specifically, light-associated pathways (e.g., photosynthesis-antenna proteins, photosynthesis, porphyrin, and chlorophyll metabolism) were significantly downregulated in microgravity. CONCLUSIONS Gene expression in A. thaliana seedlings grown in microgravity was significantly altered compared to that of the 1-g control. Understanding how plants grow in conditions of microgravity not only aids in our understanding of how plants grow and respond to the environment but will also help to efficiently grow plants during long-range space missions.
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Affiliation(s)
- Joshua P Vandenbrink
- School of Biological Sciences, Louisiana Tech University, Ruston, LA, 71272, USA
- Department of Biology, University of North Carolina at Greensboro, Greensboro, NC, 27402, USA
| | - Raul Herranz
- Centro de Investigaciones Biológicas (CSIC), Madrid, E28040, Spain
| | - William L Poehlman
- Department of Genetics and Biochemistry, Clemson University, Clemson, SC, 29634, USA
| | - F Alex Feltus
- Department of Genetics and Biochemistry, Clemson University, Clemson, SC, 29634, USA
| | | | - Malgorzata Ciska
- Centro de Investigaciones Biológicas (CSIC), Madrid, E28040, Spain
| | - F Javier Medina
- Centro de Investigaciones Biológicas (CSIC), Madrid, E28040, Spain
| | - John Z Kiss
- Department of Biology, University of North Carolina at Greensboro, Greensboro, NC, 27402, USA
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Zhou M, Sng NJ, LeFrois CE, Paul AL, Ferl RJ. Epigenomics in an extraterrestrial environment: organ-specific alteration of DNA methylation and gene expression elicited by spaceflight in Arabidopsis thaliana. BMC Genomics 2019; 20:205. [PMID: 30866818 PMCID: PMC6416986 DOI: 10.1186/s12864-019-5554-z] [Citation(s) in RCA: 29] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2018] [Accepted: 02/21/2019] [Indexed: 01/07/2023] Open
Abstract
BACKGROUND Plants adapted to diverse environments on Earth throughout their evolutionary history, and developed mechanisms to thrive in a variety of terrestrial habitats. When plants are grown in the novel environment of spaceflight aboard the International Space Station (ISS), an environment completely outside their evolutionary history, they respond with unique alterations to their gene expression profile. Identifying the genes important for physiological adaptation to spaceflight and dissecting the biological processes and pathways engaged by plants during spaceflight has helped reveal spaceflight adaptation, and has furthered understanding of terrestrial growth processes. However, the underlying regulatory mechanisms responsible for these changes in gene expression patterns are just beginning to be explored. Epigenetic modifications, such as DNA methylation at position five in cytosine, has been shown to play a role in the physiological adaptation to adverse terrestrial environments, and may play a role in spaceflight as well. RESULTS Whole Genome Bisulfite Sequencing of DNA of Arabidopsis grown on the ISS from seed revealed organ-specific patterns of differential methylation compared to ground controls. The overall levels of methylation in CG, CHG, and CHH contexts were similar between flight and ground DNA, however, thousands of specifically differentially methylated cytosines were discovered, and there were clear organ-specific differences in methylation patterns. Spaceflight leaves had higher methylation levels in CHG and CHH contexts within protein-coding genes in spaceflight; about a fifth of the leaf genes were also differentially regulated in spaceflight, almost half of which were associated with reactive oxygen signaling. CONCLUSIONS The physiological adaptation of plants to spaceflight is likely nuanced by epigenomic modification. This is the first examination of differential genomic methylation from plants grown completely in the spaceflight environment of the ISS in plant growth hardware developed for informing exploration life support strategies. Yet even in this optimized plant habitat, plants respond as if stressed. These data suggest that gene expression associated with physiological adaptation to spaceflight is regulated in part by methylation strategies similar to those engaged with familiar terrestrial stress responses. The differential methylation maps generated here provide a useful reference for elucidating the layers of regulation of spaceflight responses.
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Affiliation(s)
- Mingqi Zhou
- 0000 0004 1936 8091grid.15276.37Plant Molecular and Cellular Biology Program, University of Florida, Gainesville, FL USA ,0000 0004 1936 8091grid.15276.37Horticultural Sciences Department, University of Florida, Gainesville, FL USA
| | - Natasha J. Sng
- 0000 0004 1936 8091grid.15276.37Plant Molecular and Cellular Biology Program, University of Florida, Gainesville, FL USA ,0000 0004 1936 8091grid.15276.37Horticultural Sciences Department, University of Florida, Gainesville, FL USA
| | - Collin E. LeFrois
- 0000 0004 1936 8091grid.15276.37Horticultural Sciences Department, University of Florida, Gainesville, FL USA
| | - Anna-Lisa Paul
- 0000 0004 1936 8091grid.15276.37Plant Molecular and Cellular Biology Program, University of Florida, Gainesville, FL USA ,0000 0004 1936 8091grid.15276.37Horticultural Sciences Department, University of Florida, Gainesville, FL USA
| | - Robert J. Ferl
- 0000 0004 1936 8091grid.15276.37Plant Molecular and Cellular Biology Program, University of Florida, Gainesville, FL USA ,0000 0004 1936 8091grid.15276.37Horticultural Sciences Department, University of Florida, Gainesville, FL USA ,0000 0004 1936 8091grid.15276.37Interdisciplinary Center for Biotechnology, University of Florida, Gainesville, FL USA
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Kamal KY, Herranz R, van Loon JJWA, Medina FJ. Cell cycle acceleration and changes in essential nuclear functions induced by simulated microgravity in a synchronized Arabidopsis cell culture. PLANT, CELL & ENVIRONMENT 2019; 42:480-494. [PMID: 30105864 DOI: 10.1111/pce.13422] [Citation(s) in RCA: 20] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/07/2017] [Revised: 07/22/2018] [Accepted: 08/04/2018] [Indexed: 06/08/2023]
Abstract
Zero gravity is an environmental challenge unknown to organisms throughout evolution on Earth. Nevertheless, plants are sensitive to altered gravity, as exemplified by changes in meristematic cell proliferation and growth. We found that synchronized Arabidopsis-cultured cells exposed to simulated microgravity showed a shortened cell cycle, caused by a shorter G2/M phase and a slightly longer G1 phase. The analysis of selected marker genes and proteins by quantitative polymerase chain reaction and flow cytometry in synchronic G1 and G2 subpopulations indicated changes in gene expression of core cell cycle regulators and chromatin-modifying factors, confirming that microgravity induced misregulation of G2/M and G1/S checkpoints and chromatin remodelling. Changes in chromatin-based regulation included higher DNA methylation and lower histone acetylation, increased chromatin condensation, and overall depletion of nuclear transcription. Estimation of ribosome biogenesis rate using nucleolar parameters and selected nucleolar genes and proteins indicated reduced nucleolar activity under simulated microgravity, especially at G2/M. These results expand our knowledge of how meristematic cells are affected by real and simulated microgravity. Counteracting this cellular stress is necessary for plant culture in space exploration.
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Affiliation(s)
- Khaled Y Kamal
- Plant Cell Nucleolus, Proliferation & Microgravity Laboratory, Centro de Investigaciones Biológicas (CSIC), Madrid, Spain
- Agronomy Department, Zagazig University, Zagazig, Egypt
| | - Raúl Herranz
- Plant Cell Nucleolus, Proliferation & Microgravity Laboratory, Centro de Investigaciones Biológicas (CSIC), Madrid, Spain
| | - Jack J W A van Loon
- DESC (Dutch Experiment Support Center), Department of Oral and Maxillofacial Surgery/Oral Pathology, VU University Medical Center and Academic Centre for Dentistry Amsterdam (ACTA), Amsterdam, The Netherlands
- ESA-ESTEC, TEC-MMG, Noordwijk, The Netherlands
| | - F Javier Medina
- Plant Cell Nucleolus, Proliferation & Microgravity Laboratory, Centro de Investigaciones Biológicas (CSIC), Madrid, Spain
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Valbuena MA, Manzano A, Vandenbrink JP, Pereda-Loth V, Carnero-Diaz E, Edelmann RE, Kiss JZ, Herranz R, Medina FJ. The combined effects of real or simulated microgravity and red-light photoactivation on plant root meristematic cells. PLANTA 2018; 248:691-704. [PMID: 29948124 DOI: 10.1007/s00425-018-2930-x] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/15/2018] [Accepted: 05/29/2018] [Indexed: 05/04/2023]
Abstract
Red light is able to compensate for deleterious effects of microgravity on root cell growth and proliferation. Partial gravity combined with red light produces differential signals during the early plant development. Light and gravity are environmental cues used by plants throughout evolution to guide their development. We have investigated the cross-talk between phototropism and gravitropism under altered gravity in space. The focus was on the effects on the meristematic balance between cell growth and proliferation, which is disrupted under microgravity in the dark. In our spaceflight experiments, seedlings of three Arabidopsis thaliana genotypes, namely the wild type and mutants of phytochrome A and B, were grown for 6 days, including red-light photoactivation for the last 2 days. Apart from the microgravity and the 1g on-board control conditions, fractional gravity (nominally 0.1g, 0.3g, and 0.5g) was created with on-board centrifuges. In addition, a simulated microgravity (random positioning machine, RPM) experiment was performed on ground, including both dark-grown and photostimulated samples. Photoactivated samples in spaceflight and RPM experiments showed an increase in the root length consistent with phototropic response to red light, but, as gravity increased, a gradual decrease in this response was observed. Uncoupling of cell growth and proliferation was detected under microgravity in darkness by transcriptomic and microscopic methods, but red-light photoactivation produced a significant reversion. In contrast, the combination of red light and partial gravity produced small but consistent variations in the molecular markers of cell growth and proliferation, suggesting an antagonistic effect between light and gravity signals at the early plant development. Understanding these parameters of plant growth and development in microgravity will be important as bioregenerative life support systems for the colonization of the Moon and Mars.
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Affiliation(s)
- Miguel A Valbuena
- Centro de Investigaciones Biológicas (CSIC), Ramiro de Maeztu, 9, 28040, Madrid, Spain
- Institut Systématique, Evolution, Biodiversité (ISYEB), Museum National d'Histoire Naturelle, CNRS, Sorbonne Université, EPHE.57 rue Cuvier CP39, 75005, Paris, France
| | - Aránzazu Manzano
- Centro de Investigaciones Biológicas (CSIC), Ramiro de Maeztu, 9, 28040, Madrid, Spain
| | - Joshua P Vandenbrink
- Department of Biology, University of North Carolina at Greensboro, Greensboro, NC, 27402, USA
| | - Veronica Pereda-Loth
- Faculté de Médécine Rangeuil, Université de Toulouse III UPS, GSBMS-AMIS, Toulouse, France
| | - Eugénie Carnero-Diaz
- Institut Systématique, Evolution, Biodiversité (ISYEB), Museum National d'Histoire Naturelle, CNRS, Sorbonne Université, EPHE.57 rue Cuvier CP39, 75005, Paris, France
| | | | - John Z Kiss
- Department of Biology, University of North Carolina at Greensboro, Greensboro, NC, 27402, USA
| | - Raúl Herranz
- Centro de Investigaciones Biológicas (CSIC), Ramiro de Maeztu, 9, 28040, Madrid, Spain.
| | - F Javier Medina
- Centro de Investigaciones Biológicas (CSIC), Ramiro de Maeztu, 9, 28040, Madrid, Spain.
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14
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Trinh CS, Lee H, Lee WJ, Lee SJ, Chung N, Han J, Kim J, Hong SW, Lee H. Evaluation of the plant growth-promoting activity of Pseudomonas nitroreducens in Arabidopsis thaliana and Lactuca sativa. PLANT CELL REPORTS 2018; 37:873-885. [PMID: 29541882 DOI: 10.1007/s00299-018-2275-8] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/24/2017] [Accepted: 03/05/2018] [Indexed: 05/06/2023]
Abstract
KEY MESSAGE Pseudomonas nitroreducens: strain IHB B 13561 (PnIHB) enhances the growth of Arabidopsis thaliana and Lactuca sativa via the stimulation of cell development and nitrate absorption. Plant growth-promoting rhizobacteria (PGPR) enhance plant development through various mechanisms; they improve the uptake of soil resources by plants to greatly promote plant growth. Here, we used Arabidopsis thaliana seedlings and Lactuca sativa to screen the growth enhancement activities of a purified PGPR, Pseudomonas nitroreducens strain IHB B 13561 (PnIHB). When cocultivated with PnIHB, both species of plants exhibited notably improved growth, particularly in regard to biomass. Quantitative reverse transcription polymerase chain reaction analysis indicated high expression levels of the nitrate transporter genes, especially NRT2.1, which plays a major role in the high-affinity nitrate transport system in roots. Moreover, enhanced activity of the cyclin-B1 promoter was observed when wild-type 'Columbia-0' Arabidopsis seedlings were exposed to PnIHB, whereas upregulation of cyclin-B also occurred in the inoculated lettuce seedlings. Overall, these results suggest that PnIHB improves A. thaliana and L. sativa growth via specific pathways involved in the promotion of cell development and enhancement of nitrate uptake.
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Affiliation(s)
- Cao Son Trinh
- Department of Biosystems and Biotechnology, College of Life Sciences and Biotechnology, Korea University, Anam-dong 5-ga, Seongbuk-gu, Seoul, 136-713, Republic of Korea
| | - Hyeri Lee
- Department of Biosystems and Biotechnology, College of Life Sciences and Biotechnology, Korea University, Anam-dong 5-ga, Seongbuk-gu, Seoul, 136-713, Republic of Korea
| | - Won Je Lee
- Department of Biosystems and Biotechnology, College of Life Sciences and Biotechnology, Korea University, Anam-dong 5-ga, Seongbuk-gu, Seoul, 136-713, Republic of Korea
| | - Seok Jin Lee
- Department of Biosystems and Biotechnology, College of Life Sciences and Biotechnology, Korea University, Anam-dong 5-ga, Seongbuk-gu, Seoul, 136-713, Republic of Korea
| | - Namhyun Chung
- Department of Biosystems and Biotechnology, College of Life Sciences and Biotechnology, Korea University, Anam-dong 5-ga, Seongbuk-gu, Seoul, 136-713, Republic of Korea
| | - Juhyeong Han
- Odus R&D Center, 262 Daecheong-Ro, Samseong-myeon, Eumseong-Gun, Chungcheongbuk-Do, 369-830, Republic of Korea
| | - Jongyun Kim
- Department of Biosystems and Biotechnology, College of Life Sciences and Biotechnology, Korea University, Anam-dong 5-ga, Seongbuk-gu, Seoul, 136-713, Republic of Korea
| | - Suk-Whan Hong
- Department of Molecular Biotechnology, College of Agriculture and Life Sciences, Bioenergy Research Center, Chonnam National University, Gwangju, Republic of Korea.
| | - Hojoung Lee
- Department of Biosystems and Biotechnology, College of Life Sciences and Biotechnology, Korea University, Anam-dong 5-ga, Seongbuk-gu, Seoul, 136-713, Republic of Korea.
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15
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Kamal KY, Herranz R, van Loon JJWA, Medina FJ. Simulated microgravity, Mars gravity, and 2g hypergravity affect cell cycle regulation, ribosome biogenesis, and epigenetics in Arabidopsis cell cultures. Sci Rep 2018; 8:6424. [PMID: 29686401 PMCID: PMC5913308 DOI: 10.1038/s41598-018-24942-7] [Citation(s) in RCA: 34] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2017] [Accepted: 04/13/2018] [Indexed: 01/09/2023] Open
Abstract
Gravity is the only component of Earth environment that remained constant throughout the entire process of biological evolution. However, it is still unclear how gravity affects plant growth and development. In this study, an in vitro cell culture of Arabidopsis thaliana was exposed to different altered gravity conditions, namely simulated reduced gravity (simulated microgravity, simulated Mars gravity) and hypergravity (2g), to study changes in cell proliferation, cell growth, and epigenetics. The effects after 3, 14, and 24-hours of exposure were evaluated. The most relevant alterations were found in the 24-hour treatment, being more significant for simulated reduced gravity than hypergravity. Cell proliferation and growth were uncoupled under simulated reduced gravity, similarly, as found in meristematic cells from seedlings grown in real or simulated microgravity. The distribution of cell cycle phases was changed, as well as the levels and gene transcription of the tested cell cycle regulators. Ribosome biogenesis was decreased, according to levels and gene transcription of nucleolar proteins and the number of inactive nucleoli. Furthermore, we found alterations in the epigenetic modifications of chromatin. These results show that altered gravity effects include a serious disturbance of cell proliferation and growth, which are cellular functions essential for normal plant development.
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Affiliation(s)
- Khaled Y Kamal
- Agronomy Department, Faculty of Agriculture, Zagazig University, Zagazig, Egypt. .,Centro de Investigaciones Biológicas (CSIC), Ramiro de Maeztu 9, 28040, Madrid, Spain.
| | - Raúl Herranz
- Centro de Investigaciones Biológicas (CSIC), Ramiro de Maeztu 9, 28040, Madrid, Spain
| | - Jack J W A van Loon
- DESC (Dutch Experiment Support Center), Dept. Oral and Maxillofacial Surgery/Oral Pathology, VU University Medical Center & Academic Centre for Dentistry Amsterdam (ACTA), Gustav Mahlerlaan 3004, 1081 LA, Amsterdam, The Netherlands.,ESA-ESTEC, TEC-MMG, Keplerlaan 1, NL-2200 AG, Noordwijk, The Netherlands
| | - F Javier Medina
- Centro de Investigaciones Biológicas (CSIC), Ramiro de Maeztu 9, 28040, Madrid, Spain
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16
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Novel, Moon and Mars, partial gravity simulation paradigms and their effects on the balance between cell growth and cell proliferation during early plant development. NPJ Microgravity 2018; 4:9. [PMID: 29644337 PMCID: PMC5884789 DOI: 10.1038/s41526-018-0041-4] [Citation(s) in RCA: 25] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/01/2018] [Revised: 02/28/2018] [Accepted: 03/06/2018] [Indexed: 01/29/2023] Open
Abstract
Clinostats and Random Positioning Machine (RPM) are used to simulate microgravity, but, for space exploration, we need to know the response of living systems to fractional levels of gravity (partial gravity) as they exist on Moon and Mars. We have developed and compared two different paradigms to simulate partial gravity using the RPM, one by implementing a centrifuge on the RPM (RPMHW), the other by applying specific software protocols to driving the RPM motors (RPMSW). The effects of the simulated partial gravity were tested in plant root meristematic cells, a system with known response to real and simulated microgravity. Seeds of Arabidopsis thaliana were germinated under simulated Moon (0.17 g) and Mars (0.38 g) gravity. In parallel, seeds germinated under simulated microgravity (RPM), or at 1 g control conditions. Fixed root meristematic cells from 4-day grown seedlings were analyzed for cell proliferation rate and rate of ribosome biogenesis using morphometrical methods and molecular markers of the regulation of cell cycle and nucleolar activity. Cell proliferation appeared increased and cell growth was depleted under Moon gravity, compared with the 1 g control. The effects were even higher at the Moon level than at simulated microgravity, indicating that meristematic competence (balance between cell growth and proliferation) is also affected at this gravity level. However, the results at the simulated Mars level were close to the 1 g static control. This suggests that the threshold for sensing and responding to gravity alteration in the root would be at a level intermediate between Moon and Mars gravity. Both partial g simulation strategies seem valid and show similar results at Moon g-levels, but further research is needed, in spaceflight and simulation facilities, especially around and beyond Mars g levels to better understand more precisely the differences and constrains in the use of these facilities for the space biology community. Novel simulators of partial gravity show that the threshold for plants to sense and respond to gravity in their roots lies somewhere between gravity levels of the Moon and Mars. An international team led by Jack van Loon from the VU University Medical Center in Amsterdam, the Netherlands, reconfigured the hardware (include centrifugation) and software (new algorithm) on a microgravity-simulating instrument known as a Random Positioning Machine to produce fractional levels of gravity similar to those found on Mars (0.38 g) and the Moon (0.17 g). They germinated seeds of thale cress (Arabidopsis thaliana) in these devices, and showed in 4-day old seedlings that the balance between cell proliferation and cell growth in the roots was out of whack in both simulated microgravity and Moon gravity levels, but not in a simulated Mars scenario.
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17
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Hilo A, Shahinnia F, Druege U, Franken P, Melzer M, Rutten T, von Wirén N, Hajirezaei MR. A specific role of iron in promoting meristematic cell division during adventitious root formation. JOURNAL OF EXPERIMENTAL BOTANY 2017; 68:4233-4247. [PMID: 28922771 PMCID: PMC5853222 DOI: 10.1093/jxb/erx248] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/06/2016] [Accepted: 06/28/2017] [Indexed: 05/19/2023]
Abstract
Adventitious root (AR) formation is characterized by a sequence of physiological and morphological processes and determined by external factors, including mineral nutrition, the impacts of which remain largely elusive. Morphological and anatomical evaluation of the effects of mineral elements on AR formation in leafy cuttings of Petunia hybrida revealed a striking stimulation by iron (Fe) and a promotive action of ammonium (NH4+). The optimal application period for these nutrients corresponded to early division of meristematic cells in the rooting zone and coincided with increased transcript levels of mitotic cyclins. Fe-localization studies revealed an enhanced allocation of Fe to the nuclei of meristematic cells in AR initials. NH4+ supply promoted AR formation to a lesser extent, most likely by favoring the availability of Fe. We conclude that Fe acts locally by promoting cell division in the meristematic cells of AR primordia. These results highlight a specific biological function of Fe in AR development and point to an unexploited importance of Fe for the vegetative propagation of plants from cuttings.
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Affiliation(s)
- Alexander Hilo
- Leibniz Institute of Plant Genetics and Crop Plant Research, Corrensstraße, Gatersleben, Germany
| | - Fahimeh Shahinnia
- Leibniz Institute of Plant Genetics and Crop Plant Research, Corrensstraße, Gatersleben, Germany
| | - Uwe Druege
- Leibniz Institute of Vegetable and Ornamental Crops, Kuehnhaeuser Straße, Erfurt, Germany
| | - Philipp Franken
- Leibniz Institute of Vegetable and Ornamental Crops, Kuehnhaeuser Straße, Erfurt, Germany
| | - Michael Melzer
- Leibniz Institute of Plant Genetics and Crop Plant Research, Corrensstraße, Gatersleben, Germany
| | - Twan Rutten
- Leibniz Institute of Plant Genetics and Crop Plant Research, Corrensstraße, Gatersleben, Germany
| | - Nicolaus von Wirén
- Leibniz Institute of Plant Genetics and Crop Plant Research, Corrensstraße, Gatersleben, Germany
| | - Mohammad-Reza Hajirezaei
- Leibniz Institute of Plant Genetics and Crop Plant Research, Corrensstraße, Gatersleben, Germany
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18
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Boucheron-Dubuisson E, Manzano AI, Le Disquet I, Matía I, Sáez-Vasquez J, van Loon JJWA, Herranz R, Carnero-Diaz E, Medina FJ. Functional alterations of root meristematic cells of Arabidopsis thaliana induced by a simulated microgravity environment. JOURNAL OF PLANT PHYSIOLOGY 2016; 207:30-41. [PMID: 27792899 DOI: 10.1016/j.jplph.2016.09.011] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/20/2016] [Revised: 09/23/2016] [Accepted: 09/26/2016] [Indexed: 05/20/2023]
Abstract
Environmental gravity modulates plant growth and development, and these processes are influenced by the balance between cell proliferation and differentiation in meristems. Meristematic cells are characterized by the coordination between cell proliferation and cell growth, that is, by the accurate regulation of cell cycle progression and the optimal production of biomass for the viability of daughter cells after division. Thus, cell growth is correlated with the rate of ribosome biogenesis and protein synthesis. We investigated the effects of simulated microgravity on cellular functions of the root meristem in a sequential study. Seedlings were grown in a clinostat, a device producing simulated microgravity, for periods between 3 and 10days. In a complementary study, seedlings were grown in a Random Positioning Machine (RPM) and sampled sequentially after similar periods of growth. Under these conditions, the cell proliferation rate and the regulation of cell cycle progression showed significant alterations, accompanied by a reduction of cell growth. However, the overall size of the root meristem did not change. Analysis of cell cycle phases by flow cytometry showed changes in their proportion and duration, and the expression of the cyclin B1 gene, a marker of entry in mitosis, was decreased, indicating altered cell cycle regulation. With respect to cell growth, the rate of ribosome biogenesis was reduced under simulated microgravity, as shown by morphological and morphometric nucleolar changes and variations in the levels of the nucleolar protein nucleolin. Furthermore, in a nucleolin mutant characterized by disorganized nucleolar structure, the microgravity treatment intensified disorganization. These results show that, regardless of the simulated microgravity device used, a great disruption of meristematic competence was the first response to the environmental alteration detected at early developmental stages. However, longer periods of exposure to simulated microgravity do not produce an intensification of the cellular damages or a detectable developmental alteration in seedlings analyzed at further stages of their growth. This suggests that the secondary response to the gravity alteration is a process of adaptation, whose mechanism is still unknown, which eventually results in viable adult plants.
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Affiliation(s)
- Elodie Boucheron-Dubuisson
- Université Pierre et Marie Curie - Paris 6, Sorbonne Universités, Institut de Systématique, Évolution, Biodiversité, ISYEB - UMR 7205 - CNRS, MNHN, UPMC, EPHE, 57 rue Cuvier, CP50, 75005 Paris, France.
| | - Ana I Manzano
- Centro de Investigaciones Biológicas (CSIC), Ramiro de Maeztu 9, E-28040 Madrid, Spain.
| | - Isabel Le Disquet
- Université Pierre et Marie Curie - Paris 6, Sorbonne Universités, Institut de Systématique, Évolution, Biodiversité, ISYEB - UMR 7205 - CNRS, MNHN, UPMC, EPHE, 57 rue Cuvier, CP50, 75005 Paris, France.
| | - Isabel Matía
- Centro de Investigaciones Biológicas (CSIC), Ramiro de Maeztu 9, E-28040 Madrid, Spain.
| | - Julio Sáez-Vasquez
- Laboratoire Génome et Développement des Plantes, CNRS, UMR 5096, Université de Perpignan via Domitia, 66860 Perpignan, France.
| | - Jack J W A van Loon
- DESC (Dutch Experiment Support Center), Dept. Oral and Maxillofacial Surgery/Oral Pathology, VU University Medical Center & Academic Centre for Dentistry Amsterdam (ACTA), Gustav Mahlerlaan 3004, 1081 LA Amsterdam, The Netherlands; ESA-ESTEC, TEC-MMG, Keplerlaan 1, NL-2200 AG, Noordwijk, The Netherlands.
| | - Raúl Herranz
- Centro de Investigaciones Biológicas (CSIC), Ramiro de Maeztu 9, E-28040 Madrid, Spain.
| | - Eugénie Carnero-Diaz
- Université Pierre et Marie Curie - Paris 6, Sorbonne Universités, Institut de Systématique, Évolution, Biodiversité, ISYEB - UMR 7205 - CNRS, MNHN, UPMC, EPHE, 57 rue Cuvier, CP50, 75005 Paris, France.
| | - F Javier Medina
- Centro de Investigaciones Biológicas (CSIC), Ramiro de Maeztu 9, E-28040 Madrid, Spain.
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19
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da Silva JAT, Dobránszki J. Magnetic fields: how is plant growth and development impacted? PROTOPLASMA 2016; 253:231-48. [PMID: 25952081 DOI: 10.1007/s00709-015-0820-7] [Citation(s) in RCA: 60] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/09/2015] [Accepted: 04/13/2015] [Indexed: 05/24/2023]
Abstract
This review provides detailed insight on the effects of magnetic fields on germination, growth, development, and yield of plants focusing on ex vitro growth and development and discussing the possible physiological and biochemical responses. The MFs considered in this review range from the nanoTesla (nT) to geomagnetic levels, up to very strong MFs greater than 15 Tesla (T) and also super-weak MFs (near 0 T). The theoretical bases of the action of MFs on plant growth, which are complex, are not discussed here and thus far, there is limited mathematical background about the action of MFs on plant growth. MFs can positively influence the morphogenesis of several plants which allows them to be used in practical situations. MFs have thus far been shown to modify seed germination and affect seedling growth and development in a wide range of plants, including field, fodder, and industrial crops; cereals and pseudo-cereals; grasses; herbs and medicinal plants; horticultural crops (vegetables, fruits, ornamentals); trees; and model crops. This is important since MFs may constitute a non-residual and non-toxic stimulus. In addition to presenting and summarizing the effects of MFs on plant growth and development, we also provide possible physiological and biochemical explanations for these responses including stress-related responses of plants, explanations based on dia-, para-, and ferromagnetism, oriented movements of substances, and cellular and molecular changes.
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Affiliation(s)
| | - Judit Dobránszki
- Research Institute of Nyíregyháza, University of Debrecen, Nyíregyháza, P.O. Box 12, 4400, Hungary.
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20
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Kamal KY, Hemmersbach R, Medina FJ, Herranz R. Proper selection of 1 g controls in simulated microgravity research as illustrated with clinorotated plant cell suspension cultures. LIFE SCIENCES IN SPACE RESEARCH 2015; 5:47-52. [PMID: 26177849 DOI: 10.1016/j.lssr.2015.04.004] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/18/2014] [Revised: 03/24/2015] [Accepted: 04/08/2015] [Indexed: 06/04/2023]
Abstract
Understanding the physical and biological effects of the absence of gravity is necessary to conduct operations on space environments. It has been previously shown that the microgravity environment induces the dissociation of cell proliferation from cell growth in young seedling root meristems, but this source material is limited to few cells in each row of meristematic layers. Plant cell cultures, composed by a large and homogeneous population of proliferating cells, are an ideal model to study the effects of altered gravity on cellular mechanisms regulating cell proliferation and associated cell growth. Cell suspension cultures of Arabidopsis thaliana cell line (MM2d) were exposed to 2D-clinorotation in a pipette clinostat for 3.5 or 14 h, respectively, and were then processed either by quick freezing, to be used in flow cytometry, or by chemical fixation, for microscopy techniques. After long-term clinorotation, the proportion of cells in G1 phase was increased and the nucleolus area, as revealed by immunofluorescence staining with anti-nucleolin, was decreased. Despite the compatibility of these results with those obtained in real microgravity on seedling meristems, we provide a technical discussion in the context of clinorotation and proper 1 g controls with respect to suspension cultures. Standard 1 g procedure of sustaining the cell suspension is achieved by continuously shaking. Thus, we compare the mechanical forces acting on cells in clinorotated samples, in a control static sample and in the standard 1 g conditions of suspension cultures in order to define the conditions of a complete and reliable experiment in simulated microgravity with corresponding 1 g controls.
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Affiliation(s)
- Khaled Y Kamal
- Centro de Investigaciones Biológicas (CSIC), Madrid, Spain
| | - Ruth Hemmersbach
- Institute of Aerospace Medicine, DLR (German Aerospace Center), Köln, Germany
| | | | - Raúl Herranz
- Centro de Investigaciones Biológicas (CSIC), Madrid, Spain.
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21
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Herranz R, Valbuena MA, Manzano A, Kamal KY, Medina FJ. Use of microgravity simulators for plant biological studies. Methods Mol Biol 2015; 1309:239-54. [PMID: 25981780 DOI: 10.1007/978-1-4939-2697-8_18] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
Simulated microgravity and partial gravity research on Earth is highly convenient for every space biology researcher due to limitations of access to spaceflight. However, the use of ground-based facilities for microgravity simulation is far from simple. Microgravity simulation usually results in the need to consider additional environmental parameters which appear as secondary effects in the generation of altered gravity. These secondary effects may interfere with gravity alteration in the changes observed in the biological processes under study. Furthermore, ground-based facilities are also capable of generating hypergravity or fractional gravity conditions, which are worth being tested and compared with the results of microgravity exposure. Multiple technologies (2D clinorotation, random positioning machines, magnetic levitators or centrifuges), experimental hardware (proper use of containers and substrates for the seedlings or cell cultures), and experimental requirements (some life support/environmental parameters are more difficult to provide in certain facilities) should be collectively considered in defining the optimal experimental design that will allow us to anticipate, modify, or redefine the findings provided by the scarce spaceflight opportunities that have been (and will be) available.
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Affiliation(s)
- Raúl Herranz
- Centro de Investigaciones Biológicas (CSIC), Ramiro de Maeztu 9, 28040, Madrid, Spain,
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22
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Vandenbrink JP, Kiss JZ, Herranz R, Medina FJ. Light and gravity signals synergize in modulating plant development. FRONTIERS IN PLANT SCIENCE 2014; 5:563. [PMID: 25389428 PMCID: PMC4211383 DOI: 10.3389/fpls.2014.00563] [Citation(s) in RCA: 48] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/11/2014] [Accepted: 09/30/2014] [Indexed: 05/20/2023]
Abstract
Tropisms are growth-mediated plant movements that help plants to respond to changes in environmental stimuli. The availability of water and light, as well as the presence of a constant gravity vector, are all environmental stimuli that plants sense and respond to via directed growth movements (tropisms). The plant response to gravity (gravitropism) and the response to unidirectional light (phototropism) have long been shown to be interconnected growth phenomena. Here, we discuss the similarities in these two processes, as well as the known molecular mechanisms behind the tropistic responses. We also highlight research done in a microgravity environment in order to decouple two tropisms through experiments carried out in the absence of a significant unilateral gravity vector. In addition, alteration of gravity, especially the microgravity environment, and light irradiation produce important effects on meristematic cells, the undifferentiated, highly proliferating, totipotent cells which sustain plant development. Microgravity produces the disruption of meristematic competence, i.e., the decoupling of cell proliferation and cell growth, affecting the regulation of the cell cycle and ribosome biogenesis. Light irradiation, especially red light, mediated by phytochromes, has an activating effect on these processes. Phytohormones, particularly auxin, also are key mediators in these alterations. Upcoming experiments on the International Space Station will clarify some of the mechanisms and molecular players of the plant responses to these environmental signals involved in tropisms and the cell cycle.
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Affiliation(s)
| | - John Z. Kiss
- Department of Biology, University of Mississippi, UniversityMS, USA
| | - Raul Herranz
- Centro de Investigaciones Biológicas (CSIC), MadridSpain
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Herranz R, Valbuena MA, Youssef K, Medina FJ. Mechanisms of disruption of meristematic competence by microgravity in Arabidopsis seedlings. PLANT SIGNALING & BEHAVIOR 2014; 9:e28289. [PMID: 24614101 PMCID: PMC4091523 DOI: 10.4161/psb.28289] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/11/2023]
Abstract
Experiments performed in actively proliferating plant cells both in space and simulated microgravity have evidenced a common effect: cell proliferation appears enhanced whereas cell growth is depleted. Coordination of cell growth and proliferation, called meristematic competence, is a major feature of meristematic cells and its disruption may lead to important alterations in the developmental pattern of the plant. Auxin is known to be a mediator of the transduction of the gravitropic signal and a regulator of the rates of growth and proliferation in meristematic cells, as well as of their further differentiation. Therefore, gravity sensing, gravitropism, auxin levels, and meristematic competence are mutually interrelated. However, our experiments in simulated microgravity, using both mechanical and magnetic levitation technologies, have revealed that this interdependence is neither strict nor univocal and may include additional factors and mechanisms. Available data indicate that altered gravity may affect cell growth and proliferation by mechanisms alternative to the transduction of the gravitropic signal perceived by columella cells in the root tip. These mechanisms would include gravity sensing independent from statolith displacement and transduction mediators other than polar auxin transport.
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Affiliation(s)
- Raúl Herranz
- Centro de Investigaciones Biológicas (CSIC); Madrid, Spain
- Correspondence to: Raúl Herranz, and Francisco-Javier Medina,
| | | | - Khaled Youssef
- Centro de Investigaciones Biológicas (CSIC); Madrid, Spain
| | - Francisco-Javier Medina
- Centro de Investigaciones Biológicas (CSIC); Madrid, Spain
- Correspondence to: Raúl Herranz, and Francisco-Javier Medina,
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24
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Maffei ME. Magnetic field effects on plant growth, development, and evolution. FRONTIERS IN PLANT SCIENCE 2014; 5:445. [PMID: 25237317 PMCID: PMC4154392 DOI: 10.3389/fpls.2014.00445] [Citation(s) in RCA: 118] [Impact Index Per Article: 11.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/05/2014] [Accepted: 08/18/2014] [Indexed: 05/20/2023]
Abstract
The geomagnetic field (GMF) is a natural component of our environment. Plants, which are known to sense different wavelengths of light, respond to gravity, react to touch and electrical signaling, cannot escape the effect of GMF. While phototropism, gravitropism, and tigmotropism have been thoroughly studied, the impact of GMF on plant growth and development is not well-understood. This review describes the effects of altering magnetic field (MF) conditions on plants by considering plant responses to MF values either lower or higher than those of the GMF. The possible role of GMF on plant evolution and the nature of the magnetoreceptor is also discussed.
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Affiliation(s)
- Massimo E. Maffei
- *Correspondence: Massimo E. Maffei, Department Life Sciences and Systems Biology, Plant Physiology-Innovation Centre, University of Turin, Via Quarello 15/A, I-10135 Turin, Italy e-mail:
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