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For: Zhang X, Ma YN, Wang X, Liao K, He S, Zhao X, Guo H, Zhao D, Wei HL. Dynamics of rice microbiomes reveal core vertically transmitted seed endophytes. Microbiome 2022;10:216. [PMID: 36482381 PMCID: PMC9733015 DOI: 10.1186/s40168-022-01422-9] [Citation(s) in RCA: 49] [Impact Index Per Article: 16.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/28/2022] [Accepted: 11/09/2022] [Indexed: 06/17/2023]
Number Cited by Other Article(s)
1
Wang X, Li Y, Rensing C, Zhang X. Early inoculation and bacterial community assembly in plants: A review. Microbiol Res 2025;296:128141. [PMID: 40120566 DOI: 10.1016/j.micres.2025.128141] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/12/2024] [Revised: 03/01/2025] [Accepted: 03/13/2025] [Indexed: 03/25/2025]
2
Dwivedi SL, Vetukuri RR, Kelbessa BG, Gepts P, Heslop-Harrison P, Araujo ASF, Sharma S, Ortiz R. Exploitation of rhizosphere microbiome biodiversity in plant breeding. TRENDS IN PLANT SCIENCE 2025:S1360-1385(25)00103-7. [PMID: 40335388 DOI: 10.1016/j.tplants.2025.04.004] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/12/2024] [Revised: 03/28/2025] [Accepted: 04/07/2025] [Indexed: 05/09/2025]
3
Zhang WD, Liu YY, Li MM, Du H, Huang KY, Feng YY, Ma CW, Wei XX, Wang XQ, Ran JH. Decoding endosperm endophytes in Pinus armandi: a crucial indicator for host response to climate change. BMC Microbiol 2025;25:239. [PMID: 40269688 PMCID: PMC12016235 DOI: 10.1186/s12866-025-03910-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2024] [Accepted: 03/19/2025] [Indexed: 04/25/2025]  Open
4
Ma J, Peng Q, Chen S, Liu Z, Zhang W, Zhang C, Du X, Sun S, Peng W, Lei Z, Zhang L, Su P, Zhang D, Liu Y. Microbiome Migration from Soil to Leaves in Maize and Rice. Microorganisms 2025;13:947. [PMID: 40284783 PMCID: PMC12029745 DOI: 10.3390/microorganisms13040947] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/17/2025] [Revised: 04/13/2025] [Accepted: 04/15/2025] [Indexed: 04/29/2025]  Open
5
Li J, Zhang H, Long S, Li W, Wang T, Yu J, Zhou Y, Zou S, Zhu H, Xu J, Cheng Y. DNA metabarcode analyses reveal similarities and differences in plant microbiomes of industrial hemp and medicinal Cannabis in China. Front Microbiol 2025;16:1524703. [PMID: 40303473 PMCID: PMC12037489 DOI: 10.3389/fmicb.2025.1524703] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/08/2024] [Accepted: 04/01/2025] [Indexed: 05/02/2025]  Open
6
Marian M, Antonielli L, Pertot I, Perazzolli M. Amplicon sequencing and culture-dependent approaches reveal core bacterial endophytes aiding freezing stress tolerance in alpine Rosaceae plants. mBio 2025;16:e0141824. [PMID: 39998219 PMCID: PMC11980557 DOI: 10.1128/mbio.01418-24] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2024] [Accepted: 01/21/2025] [Indexed: 02/26/2025]  Open
7
Díaz-González S, González-Bodí S, González-Sanz C, Marín P, Brunner F, Sacristán S. Maize associated bacterial and fungal microbiomes show contrasting conformation patterns dependent on plant compartment and water availability. BMC PLANT BIOLOGY 2025;25:448. [PMID: 40205544 PMCID: PMC11980124 DOI: 10.1186/s12870-025-06465-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/22/2024] [Accepted: 03/25/2025] [Indexed: 04/11/2025]
8
Shi M, Qin T, Pu Z, Yang Z, Lim KJ, Yang M, Wang Z. Salt stress alters the selectivity of mature pecan for the rhizosphere community and its associated functional traits. FRONTIERS IN PLANT SCIENCE 2025;16:1473473. [PMID: 40206877 PMCID: PMC11979281 DOI: 10.3389/fpls.2025.1473473] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/31/2024] [Accepted: 02/24/2025] [Indexed: 04/11/2025]
9
Zeng Q, Hu HW, Ge AH, Xiong C, Zhai CC, Duan GL, Han LL, Huang SY, Zhang LM. Plant-microbiome interactions and their impacts on plant adaptation to climate change. JOURNAL OF INTEGRATIVE PLANT BIOLOGY 2025;67:826-844. [PMID: 39981843 DOI: 10.1111/jipb.13863] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/15/2025] [Accepted: 01/20/2025] [Indexed: 02/22/2025]
10
Maestro-Gaitán I, Redondo-Nieto M, González-Bodí S, Rodríguez-Casillas L, Matías J, Bolaños L, Reguera M. Insights into quinoa endophytes: core bacterial communities reveal high stability to water stress and genotypic variation. ENVIRONMENTAL MICROBIOME 2025;20:16. [PMID: 39901227 PMCID: PMC11789408 DOI: 10.1186/s40793-025-00673-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/28/2024] [Accepted: 01/13/2025] [Indexed: 02/05/2025]
11
Li D, Chen W, Luo W, Zhang H, Liu Y, Shu D, Wei G. Seed microbiomes promote Astragalus mongholicus seed germination through pathogen suppression and cellulose degradation. MICROBIOME 2025;13:23. [PMID: 39856709 PMCID: PMC11761781 DOI: 10.1186/s40168-024-02014-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/14/2024] [Accepted: 12/17/2024] [Indexed: 01/27/2025]
12
Misu IJ, Kayess MO, Siddiqui MN, Gupta DR, Islam MN, Islam T. Microbiome Engineering for Sustainable Rice Production: Strategies for Biofertilization, Stress Tolerance, and Climate Resilience. Microorganisms 2025;13:233. [PMID: 40005600 PMCID: PMC11857137 DOI: 10.3390/microorganisms13020233] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2024] [Revised: 01/11/2025] [Accepted: 01/14/2025] [Indexed: 02/27/2025]  Open
13
Dong Y, Gong J, Yang L, Jiang Q, Wen C, Zhang J, Yang R, Wang Y, Dai Y, Gao G, Li S, Cao Y, Ding W. Superiority of native seed core microbiomes in the suppression of bacterial wilt disease. Front Microbiol 2025;15:1506059. [PMID: 39881988 PMCID: PMC11778171 DOI: 10.3389/fmicb.2024.1506059] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2024] [Accepted: 12/09/2024] [Indexed: 01/31/2025]  Open
14
Jiang C, Wang F, Tian J, Zhang W, Xie K. Two rice cultivars recruit different rhizospheric bacteria to promote aboveground regrowth after mechanical defoliation. Microbiol Spectr 2025;13:e0125424. [PMID: 39651854 PMCID: PMC11705949 DOI: 10.1128/spectrum.01254-24] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/22/2024] [Accepted: 11/03/2024] [Indexed: 01/11/2025]  Open
15
Khan D, Shaw R, Kabiraj A, Paul A, Bandopadhyay R. Microbial inheritance through seed: a clouded area needs to be enlightened. Arch Microbiol 2025;207:23. [PMID: 39754662 DOI: 10.1007/s00203-024-04225-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2024] [Revised: 12/13/2024] [Accepted: 12/21/2024] [Indexed: 01/06/2025]
16
Li XY, Zhu CW, Chen S, Xiang Q, Lu C, Lin XY, Chen QL. Elevated CO2 Increased Antibiotic Resistomes in Seed Endophytes: Evidence from a Free-Air CO2 Enrichment (FACE) Experiment. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2024;58:23190-23200. [PMID: 39680930 DOI: 10.1021/acs.est.4c09625] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/18/2024]
17
Zhou Y, Jin Z, Ren X, Hong C, Hua Z, Zhu Y, Dong Y, Li X. Symbiotic conserved arbuscular mycorrhiza fungi supports plant health. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024;955:176974. [PMID: 39419224 DOI: 10.1016/j.scitotenv.2024.176974] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/07/2024] [Revised: 10/14/2024] [Accepted: 10/14/2024] [Indexed: 10/19/2024]
18
Zhou X, Liu F, Wang CC, Zhang HL, Zhao P, Xie FH, Hu DM, Duan WJ, Cai L. Characterization of core microbiota of barley seeds from different continents for origin tracing and quarantine pathogen assessment. Food Microbiol 2024;124:104615. [PMID: 39244367 DOI: 10.1016/j.fm.2024.104615] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/22/2023] [Revised: 07/25/2024] [Accepted: 07/30/2024] [Indexed: 09/09/2024]
19
Yang M, Zhao Y, Li L, Qi Y, Gao P, Guo J, Liu J, Chen Z, Zhao J, Yu L. Functional dynamics analysis of endophytic microbial communities during Amorphophallus muelleri seed maturation. Sci Rep 2024;14:28432. [PMID: 39558081 PMCID: PMC11574185 DOI: 10.1038/s41598-024-79850-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/20/2024] [Accepted: 11/12/2024] [Indexed: 11/20/2024]  Open
20
Qi J, Xiao F, Liu X, Li J, Wang H, Li S, Yu H, Xu Y, Wang H. The fall armyworm converts maize endophytes into its own probiotics to detoxify benzoxazinoids and promote caterpillar growth. MICROBIOME 2024;12:240. [PMID: 39548567 PMCID: PMC11568528 DOI: 10.1186/s40168-024-01957-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/18/2024] [Accepted: 10/22/2024] [Indexed: 11/18/2024]
21
Nag P, Supriya Y, Datta J, Bera S, Das S. Investigating Microbial Diversity in the Endosphere and Rhizoplane of Three Aromatic Rice Landraces: Implications for Biological Nitrogen Fixation. Curr Microbiol 2024;81:454. [PMID: 39528876 DOI: 10.1007/s00284-024-03978-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/01/2024] [Accepted: 10/28/2024] [Indexed: 11/16/2024]
22
Wang K, Wang Q, Hong L, Liu Y, Yang J, Asiegbu FO, Wu P, Huang L, Ma X. Distribution and characterization of endophytic and rhizosphere bacteriome of below-ground tissues in Chinese fir plantation. TREE PHYSIOLOGY 2024;44:tpae137. [PMID: 39423250 DOI: 10.1093/treephys/tpae137] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/12/2024] [Revised: 08/19/2024] [Accepted: 10/17/2024] [Indexed: 10/21/2024]
23
Pantinople DJ, Conner R, Sutton-Dauber S, Broussard K, Siniscalchi CM, Engle-Wrye NJ, Jordan HR, Folk RA. Continental sampling reveals core bacterial and environmentally driven fungal leaf endophytes in Heuchera. AMERICAN JOURNAL OF BOTANY 2024;111:e16428. [PMID: 39449649 DOI: 10.1002/ajb2.16428] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/15/2024] [Revised: 07/17/2024] [Accepted: 07/19/2024] [Indexed: 10/26/2024]
24
Xu S, Hong L, Wu T, Liu X, Ding Z, Liu L, Shao Q, Zheng Y, Xing B. Insight into saffron associated microbiota from different origins and explore the endophytes for enhancement of bioactive compounds. Food Chem 2024;456:140006. [PMID: 38870814 DOI: 10.1016/j.foodchem.2024.140006] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2024] [Revised: 05/31/2024] [Accepted: 06/06/2024] [Indexed: 06/15/2024]
25
Oeum K, Suong M, Uon K, Jobert L, Bellafiore S, Comte A, Thomas E, Kuok F, Moulin L. Comparison of plant microbiota in diseased and healthy rice reveals methylobacteria as health signatures with biocontrol capabilities. FRONTIERS IN PLANT SCIENCE 2024;15:1468192. [PMID: 39534110 PMCID: PMC11554501 DOI: 10.3389/fpls.2024.1468192] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/21/2024] [Accepted: 09/27/2024] [Indexed: 11/16/2024]
26
Jaiswal G, Rana R, Nayak PK, Chouhan R, Gandhi SG, Patel HK, Patil PB. Luteibacter sahnii sp. nov., A Novel Yellow-Colored Xanthomonadin Pigment Producing Probiotic Bacterium from Healthy Rice Seed Microbiome. Curr Microbiol 2024;81:424. [PMID: 39446145 DOI: 10.1007/s00284-024-03950-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/26/2024] [Accepted: 10/15/2024] [Indexed: 10/25/2024]
27
Mao Y, Li N, Huang Y, Chen D, Sun K. Divergence of rhizosphere microbial communities between females and males of the dioecious Hippophae tibetana at different habitats. Microbiol Spectr 2024;12:e0167024. [PMID: 39258920 PMCID: PMC11448439 DOI: 10.1128/spectrum.01670-24] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/07/2024] [Accepted: 08/14/2024] [Indexed: 09/12/2024]  Open
28
Rana R, Nayak PK, Madhavan VN, Sonti RV, Patel HK, Patil PB. Comparative genomics-based insights into Xanthomonas indica, a non-pathogenic species of healthy rice microbiome with bioprotection function. Appl Environ Microbiol 2024;90:e0084824. [PMID: 39158313 PMCID: PMC11409687 DOI: 10.1128/aem.00848-24] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/01/2024] [Accepted: 07/02/2024] [Indexed: 08/20/2024]  Open
29
Rana R, Patil PB. Xanthomonas sontii, and Not X. sacchari, Is the Predominant Vertically Transmitted Core Rice Seed Endophyte. PHYTOPATHOLOGY 2024;114:2017-2023. [PMID: 38916954 DOI: 10.1094/phyto-04-24-0141-sc] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/27/2024]
30
Wang D, Wan Y, Liu D, Wang N, Wu J, Gu Q, Wu H, Gao X, Wang Y. Immune-enriched phyllosphere microbiome in rice panicle exhibits protective effects against rice blast and rice false smut diseases. IMETA 2024;3:e223. [PMID: 39135691 PMCID: PMC11316918 DOI: 10.1002/imt2.223] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/03/2024] [Revised: 06/13/2024] [Accepted: 06/14/2024] [Indexed: 08/15/2024]
31
Pearman WS, Duffy GA, Gemmell NJ, Morales SE, Fraser CI. Long-distance movement dynamics shape host microbiome richness and turnover. FEMS Microbiol Ecol 2024;100:fiae089. [PMID: 38857884 PMCID: PMC11212666 DOI: 10.1093/femsec/fiae089] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/06/2023] [Revised: 05/22/2024] [Accepted: 06/08/2024] [Indexed: 06/12/2024]  Open
32
Barone GD, Zhou Y, Wang H, Xu S, Ma Z, Cernava T, Chen Y. Implications of bacteria‒bacteria interactions within the plant microbiota for plant health and productivity. J Zhejiang Univ Sci B 2024;25:1-16. [PMID: 38773879 DOI: 10.1631/jzus.b2300914] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2023] [Accepted: 02/26/2024] [Indexed: 05/24/2024]
33
Joubert PM, Krasileva KV. Distinct genomic contexts predict gene presence-absence variation in different pathotypes of Magnaporthe oryzae. Genetics 2024;226:iyae012. [PMID: 38290434 PMCID: PMC10990425 DOI: 10.1093/genetics/iyae012] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/28/2023] [Revised: 11/28/2023] [Accepted: 12/19/2023] [Indexed: 02/01/2024]  Open
34
Luo DL, Huang SY, Ma CY, Zhang XY, Sun K, Zhang W, Dai CC. Seed-borne bacterial synthetic community resists seed pathogenic fungi and promotes plant growth. J Appl Microbiol 2024;135:lxae073. [PMID: 38520150 DOI: 10.1093/jambio/lxae073] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2023] [Revised: 02/21/2024] [Accepted: 03/21/2024] [Indexed: 03/25/2024]
35
Yao Y, Liu C, Zhang Y, Lin Y, Chen T, Xie J, Chang H, Fu Y, Cheng J, Li B, Yu X, Lyu X, Feng Y, Bian X, Jiang D. The Dynamic Changes of Brassica napus Seed Microbiota across the Entire Seed Life in the Field. PLANTS (BASEL, SWITZERLAND) 2024;13:912. [PMID: 38592934 PMCID: PMC10975644 DOI: 10.3390/plants13060912] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/18/2024] [Revised: 03/15/2024] [Accepted: 03/18/2024] [Indexed: 04/11/2024]
36
Zhao J, Yu X, Zhang C, Hou L, Wu N, Zhang W, Wang Y, Yao B, Delaplace P, Tian J. Harnessing microbial interactions with rice: Strategies for abiotic stress alleviation in the face of environmental challenges and climate change. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024;912:168847. [PMID: 38036127 DOI: 10.1016/j.scitotenv.2023.168847] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/24/2023] [Revised: 11/21/2023] [Accepted: 11/22/2023] [Indexed: 12/02/2023]
37
Nanfack AD, Nguefack J, Musonerimana S, La China S, Giovanardi D, Stefani E. Exploiting the microbiome associated with normal and abnormal sprouting rice (Oryza sativa L.) seed phenotypes through a metabarcoding approach. Microbiol Res 2024;279:127546. [PMID: 37992468 DOI: 10.1016/j.micres.2023.127546] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/29/2023] [Revised: 10/16/2023] [Accepted: 11/07/2023] [Indexed: 11/24/2023]
38
Qin S, Pang Y, Hu H, Liu T, Yuan D, Clough T, Wrage-Mönnig N, Luo J, Zhou S, Ma L, Hu C, Oenema O. Foliar N2 O emissions constitute a significant source to atmosphere. GLOBAL CHANGE BIOLOGY 2024;30:e17181. [PMID: 38372171 DOI: 10.1111/gcb.17181] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/14/2023] [Revised: 01/05/2024] [Accepted: 01/08/2024] [Indexed: 02/20/2024]
39
Wu C, Zhang X, Fan Y, Ye J, Dong L, Wang Y, Ren Y, Yong H, Liu R, Wang A. Vertical transfer and functional characterization of cotton seed core microbiome. Front Microbiol 2024;14:1323342. [PMID: 38264479 PMCID: PMC10803423 DOI: 10.3389/fmicb.2023.1323342] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/17/2023] [Accepted: 12/22/2023] [Indexed: 01/25/2024]  Open
40
Rana R, Sharma A, Madhavan VN, Korpole S, Sonti RV, Patel HK, Patil PB. Xanthomonas protegens sp. nov., a novel rice seed-associated bacterium, provides in vivo protection against X. oryzae pv. oryzae, the bacterial leaf blight pathogen. FEMS Microbiol Lett 2024;371:fnae093. [PMID: 39500549 DOI: 10.1093/femsle/fnae093] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/07/2024] [Revised: 10/28/2024] [Accepted: 11/01/2024] [Indexed: 11/28/2024]  Open
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Wu PH, Chang HX. Colonization compatibility with Bacillus altitudinis confers soybean seed rot resistance. THE ISME JOURNAL 2024;18:wrae142. [PMID: 39073909 PMCID: PMC11378728 DOI: 10.1093/ismejo/wrae142] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/10/2024] [Revised: 07/15/2024] [Accepted: 07/25/2024] [Indexed: 07/31/2024]
42
Song J, Wang D, Han D, Zhang DD, Li R, Kong ZQ, Dai XF, Subbarao KV, Chen JY. Characterization of the Endophytic Bacillus subtilis KRS015 Strain for Its Biocontrol Efficacy Against Verticillium dahliae. PHYTOPATHOLOGY 2024;114:61-72. [PMID: 37530500 DOI: 10.1094/phyto-04-23-0142-r] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 08/03/2023]
43
Khalaf EM, Shrestha A, Reid M, McFadyen BJ, Raizada MN. Conservation and diversity of the pollen microbiome of Pan-American maize using PacBio and MiSeq. Front Microbiol 2023;14:1276241. [PMID: 38179444 PMCID: PMC10764481 DOI: 10.3389/fmicb.2023.1276241] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2023] [Accepted: 11/21/2023] [Indexed: 01/06/2024]  Open
44
Shen Y, Liu Y, Du Y, Wang X, Guan J, Jia X, Xu F, Song Z, Gao H, Zhang B, Guo P. Transfer of antibiotic resistance genes from soil to wheat: Role of host bacteria, impact on seed-derived bacteria, and affecting factors. THE SCIENCE OF THE TOTAL ENVIRONMENT 2023;905:167279. [PMID: 37741386 DOI: 10.1016/j.scitotenv.2023.167279] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/02/2023] [Revised: 09/17/2023] [Accepted: 09/20/2023] [Indexed: 09/25/2023]
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Zeng Q, Zhao Y, Shen W, Han D, Yang M. Seed-to-Seed: Plant Core Vertically Transmitted Microbiota. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2023;71:19255-19264. [PMID: 38044571 DOI: 10.1021/acs.jafc.3c07092] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/05/2023]
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Sun Z, Adeleke BS, Shi Y, Li C. The seed microbiomes of staple food crops. Microb Biotechnol 2023;16:2236-2249. [PMID: 37815330 PMCID: PMC10686132 DOI: 10.1111/1751-7915.14352] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2023] [Revised: 09/19/2023] [Accepted: 09/22/2023] [Indexed: 10/11/2023]  Open
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Wippel K. Plant and microbial features governing an endophytic lifestyle. CURRENT OPINION IN PLANT BIOLOGY 2023;76:102483. [PMID: 37939457 DOI: 10.1016/j.pbi.2023.102483] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/17/2023] [Revised: 10/06/2023] [Accepted: 10/13/2023] [Indexed: 11/10/2023]
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Acuña JJ, Hu J, Inostroza NG, Valenzuela T, Perez P, Epstein S, Sessitsch A, Zhang Q, Jorquera MA. Endophytic bacterial communities in ungerminated and germinated seeds of commercial vegetables. Sci Rep 2023;13:19829. [PMID: 37963999 PMCID: PMC10645892 DOI: 10.1038/s41598-023-47099-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2023] [Accepted: 11/09/2023] [Indexed: 11/16/2023]  Open
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Lv H, Li X, He D, Chen X, Liu M, Lan Y, Zhao J, Wang H, Yan Z. Genotype-Controlled Vertical Transmission Exerts Selective Pressure on Community Assembly of Salvia miltiorrhiza. MICROBIAL ECOLOGY 2023;86:2934-2948. [PMID: 37667132 DOI: 10.1007/s00248-023-02295-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/07/2023] [Accepted: 08/27/2023] [Indexed: 09/06/2023]
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Sessitsch A, Wakelin S, Schloter M, Maguin E, Cernava T, Champomier-Verges MC, Charles TC, Cotter PD, Ferrocino I, Kriaa A, Lebre P, Cowan D, Lange L, Kiran S, Markiewicz L, Meisner A, Olivares M, Sarand I, Schelkle B, Selvin J, Smidt H, van Overbeek L, Berg G, Cocolin L, Sanz Y, Fernandes WL, Liu SJ, Ryan M, Singh B, Kostic T. Microbiome Interconnectedness throughout Environments with Major Consequences for Healthy People and a Healthy Planet. Microbiol Mol Biol Rev 2023;87:e0021222. [PMID: 37367231 PMCID: PMC10521359 DOI: 10.1128/mmbr.00212-22] [Citation(s) in RCA: 37] [Impact Index Per Article: 18.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/28/2023]  Open
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