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Xia Y, Liu W, Meng J, Hu J, Liu W, Kang J, Luo B, Zhang H, Tang W. Principles, developments, and applications of spatially resolved spectroscopy in agriculture: a review. Front Plant Sci 2024; 14:1324881. [PMID: 38269139 PMCID: PMC10805836 DOI: 10.3389/fpls.2023.1324881] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/20/2023] [Accepted: 12/19/2023] [Indexed: 01/26/2024]
Abstract
Agriculture is the primary source of human survival, which provides the most basic living and survival conditions for human beings. As living standards continue to improve, people are also paying more attention to the quality and safety of agricultural products. Therefore, the detection of agricultural product quality is very necessary. In the past decades, the spectroscopy technique has been widely used because of its excellent results in agricultural quality detection. However, traditional spectral inspection methods cannot accurately describe the internal information of agricultural products. With the continuous research and development of optical properties, it has been found that the internal quality of an object can be better reflected by separating the properties of light, such as its absorption and scattering properties. In recent years, spatially resolved spectroscopy has been increasingly used in the field of agricultural product inspection due to its simple compositional structure, low-value cost, ease of operation, efficient detection speed, and outstanding ability to obtain information about agricultural products at different depths. It can also separate optical properties based on the transmission equation of optics, which allows for more accurate detection of the internal quality of agricultural products. This review focuses on the principles of spatially resolved spectroscopy, detection equipment, analytical methods, and specific applications in agricultural quality detection. Additionally, the optical properties methods and direct analysis methods of spatially resolved spectroscopy analysis methods are also reported in this paper.
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Affiliation(s)
- Yu Xia
- School of Electrical and Control Engineering, Shaanxi University of Science & Technology, Xi’an, Shaanxi, China
| | - Wenxi Liu
- School of Electrical and Control Engineering, Shaanxi University of Science & Technology, Xi’an, Shaanxi, China
- Intelligent Equipment Research Center, Beijing Academy of Agriculture and Forestry Sciences, Beijing, China
| | - Jingwu Meng
- School of Electrical and Control Engineering, Shaanxi University of Science & Technology, Xi’an, Shaanxi, China
| | - Jinghao Hu
- School of Electrical and Control Engineering, Shaanxi University of Science & Technology, Xi’an, Shaanxi, China
| | - Wenbo Liu
- School of Electrical and Control Engineering, Shaanxi University of Science & Technology, Xi’an, Shaanxi, China
| | - Jie Kang
- School of Electrical and Control Engineering, Shaanxi University of Science & Technology, Xi’an, Shaanxi, China
| | - Bin Luo
- Intelligent Equipment Research Center, Beijing Academy of Agriculture and Forestry Sciences, Beijing, China
| | - Han Zhang
- Intelligent Equipment Research Center, Beijing Academy of Agriculture and Forestry Sciences, Beijing, China
| | - Wei Tang
- School of Electrical and Control Engineering, Shaanxi University of Science & Technology, Xi’an, Shaanxi, China
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Rehman AU, Ahmad I, Qureshi SA. Biomedical Applications of Integrating Sphere: A Review. Photodiagnosis Photodyn Ther 2020; 31:101712. [DOI: 10.1016/j.pdpdt.2020.101712] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/02/2019] [Revised: 02/05/2020] [Accepted: 03/02/2020] [Indexed: 10/24/2022]
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3
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Ankri R, Basu A, Ulku AC, Bruschini C, Charbon E, Weiss S, Michalet X. Single-Photon, Time-Gated, Phasor-Based Fluorescence Lifetime Imaging through Highly Scattering Medium. ACS Photonics 2020; 7:68-79. [PMID: 35936550 PMCID: PMC9355389 DOI: 10.1021/acsphotonics.9b00874] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/22/2023]
Abstract
Fluorescence lifetime imaging (FLI) is increasingly recognized as a powerful tool for biochemical and cellular investigations, including in vivo applications. Fluorescence lifetime is an intrinsic characteristic of any fluorescent dye which, to a large extent, does not depend on excitation intensity and signal level. In particular, it allows distinguishing dyes with similar emission spectra, offering additional multiplexing capabilities. However, in vivo FLI in the visible range is complicated by the contamination by (i) tissue autofluorescence, which decreases contrast, and by (ii) light scattering and absorption in tissues, which significantly reduce fluorescence intensity and modify the temporal profile of the signal. Here, we demonstrate how these issues can be accounted for and overcome, using a new time-gated single-photon avalanche diode array camera, SwissSPAD2, combined with phasor analysis to provide a simple and fast visual method for lifetime imaging. In particular, we show how phasor dispersion increases with increasing scattering and/or decreasing fluorescence intensity. Next, we show that as long as the fluorescence signal of interest is larger than the phantom autofluorescence, the presence of a distinct lifetime can be clearly identified with appropriate background correction. We use these results to demonstrate the detection of A459 cells expressing the fluorescent protein mCyRFP1 through highly scattering and autofluorescent phantom layers. These results showcase the possibility to perform FLI in challenging conditions, using standard, bright, visible fluorophore or fluorescence proteins.
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Affiliation(s)
- Rinat Ankri
- Department of Chemistry & Biochemistry, UCLA, Los Angeles, California 90095, United States
- Corresponding Authors:.
| | - Arkaprabha Basu
- Department of Chemistry & Biochemistry, UCLA, Los Angeles, California 90095, United States
| | - Arin Can Ulku
- School of Engineering, École Polytechnique Fédérale de Lausanne, Neuchâtel 1015, Switzerland
| | - Claudio Bruschini
- School of Engineering, École Polytechnique Fédérale de Lausanne, Neuchâtel 1015, Switzerland
| | - Edoardo Charbon
- School of Engineering, École Polytechnique Fédérale de Lausanne, Neuchâtel 1015, Switzerland
| | - Shimon Weiss
- Department of Chemistry & Biochemistry, UCLA, Los Angeles, California 90095, United States
| | - Xavier Michalet
- Department of Chemistry & Biochemistry, UCLA, Los Angeles, California 90095, United States
- Corresponding Authors:.
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Yariv I, Shapira C, Duadi H, Fixler D. Media Characterization under Scattering Conditions by Nanophotonics Iterative Multiplane Spectroscopy Measurements. ACS Omega 2019; 4:14301-14306. [PMID: 31508554 PMCID: PMC6733169 DOI: 10.1021/acsomega.9b01976] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/30/2019] [Accepted: 08/09/2019] [Indexed: 05/21/2023]
Abstract
Characterizing materials is preferably done by multiple wavelengths. In opaque materials, the scattering poses a challenge due to the additional complexity to the spectroscopic measurements. We have previously demonstrated an iterative multiplane method for characterizing materials using the reflection from turbid media. Initial studies were performed in the red wavelength regime (632.8 nm) which is optimal for biomedical applications. However, in order to differentiate between materials, it is better to use multiple wavelengths, as spectroscopy may detect the material fingerprint. In this paper, our iterative multiplane optical property extraction (IMOPE) technique is presented in the blue regime (473 nm). Agar-based solid phantom measurements were conducted and compared to our theoretical model. Compatibility between experiments in the red and blue wavelengths shows the robustness of our technique.
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Eshein A, Radosevich AJ, Gould B, Wu W, Konda V, Yang LW, Koons A, Feder S, Valuckaite V, Roy HK, Backman V, Nguyen TQ. Fully automated fiber-based optical spectroscopy system for use in a clinical setting. J Biomed Opt 2018; 23:1-10. [PMID: 29981224 PMCID: PMC8357326 DOI: 10.1117/1.jbo.23.7.075003] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/05/2018] [Accepted: 06/05/2018] [Indexed: 05/04/2023]
Abstract
While there are a plethora of in vivo fiber-optic spectroscopic techniques that have demonstrated the ability to detect a number of diseases in research trials with highly trained personnel familiar with the operation of experimental optical technologies, very few techniques show the same level of success in large multicenter trials. To meet the stringent requirements for a viable optical spectroscopy system to be used in a clinical setting, we developed components including an automated calibration tool, optical contact sensor for signal acquisition, and a methodology for real-time in vivo probe calibration correction. The end result is a state-of-the-art medical device that can be realistically used by a physician with spectroscopic fiber-optic probes. We show how the features of this system allow it to have excellent stability measuring two scattering phantoms in a clinical setting by clinical staff with ∼0.5 % standard deviation over 25 unique measurements on different days. In addition, we show the systems' ability to overcome many technical obstacles that spectroscopy applications often face such as speckle noise and user variability. While this system has been designed and optimized for our specific application, the system and design concepts are applicable to most in vivo fiber-optic-based spectroscopic techniques.
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Affiliation(s)
- Adam Eshein
- Northwestern University, Department of Biomedical Engineering, Evanston, Illinois, United States
| | - Andrew J. Radosevich
- Northwestern University, Department of Biomedical Engineering, Evanston, Illinois, United States
| | - Bradley Gould
- Northwestern University, Department of Biomedical Engineering, Evanston, Illinois, United States
| | - Wenli Wu
- Northwestern University, Department of Biomedical Engineering, Evanston, Illinois, United States
| | - Vani Konda
- University of Chicago Medicine, Center for Endoscopic Research and Therapeutics, Chicago, Illinois, United States
| | - Leslie W. Yang
- University of Chicago Medicine, Center for Endoscopic Research and Therapeutics, Chicago, Illinois, United States
| | - Ann Koons
- University of Chicago Medicine, Center for Endoscopic Research and Therapeutics, Chicago, Illinois, United States
| | - Seth Feder
- Northwestern University, Department of Biomedical Engineering, Evanston, Illinois, United States
| | - Vesta Valuckaite
- University of Chicago Medicine, Center for Endoscopic Research and Therapeutics, Chicago, Illinois, United States
| | - Hemant K. Roy
- Boston Medical Center, Department of Gastroenterology, Boston, Massachusetts, United States
| | - Vadim Backman
- Northwestern University, Department of Biomedical Engineering, Evanston, Illinois, United States
| | - The-Quyen Nguyen
- Northwestern University, Department of Biomedical Engineering, Evanston, Illinois, United States
- Address all correspondence to: The-Quyen Nguyen, E-mail:
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Lariviere B, Garman KS, Ferguson NL, Fisher DA, Jokerst NM. Spatially resolved diffuse reflectance spectroscopy endoscopic sensing with custom Si photodetectors. Biomed Opt Express 2018; 9. [PMID: 29541510 PMCID: PMC5846520 DOI: 10.1364/boe.9.001164] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/13/2023]
Abstract
Early detection and surveillance of disease progression in epithelial tissue is key to improving long term patient outcomes for colon and esophageal cancers, which account for nearly a quarter of cancer related mortalities worldwide. Spatially resolved diffuse reflectance spectroscopy (SRDRS) is a non-invasive optical technique to sense biological changes at the cellular and sub-cellular level that occur when normal tissue becomes diseased, and has the potential to significantly improve the current standard of care for endoscopic gastrointestinal (GI) screening. Herein the design, fabrication, and characterization of the first custom SRDRS device to enable endoscopic SRDRS GI tissue characterization using a custom silicon (Si) thin film multi-pixel endoscopic optical sensor (MEOS) is described.
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Affiliation(s)
- Ben Lariviere
- Department of Electrical and Computer Engineering, Duke University, 101 Science Drive, Durham, NC 27708, USA
| | | | | | | | - Nan M. Jokerst
- Department of Electrical and Computer Engineering, Duke University, 101 Science Drive, Durham, NC 27708, USA
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Qin J, Kim MS, Chao K, Schmidt WF, Dhakal S, Cho BK, Peng Y, Huang M. Subsurface inspection of food safety and quality using line-scan spatially offset Raman spectroscopy technique. Food Control 2017. [DOI: 10.1016/j.foodcont.2016.12.012] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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Qin J, Kim MS, Chao K, Schmidt WF, Cho B, Delwiche SR. Line-scan Raman imaging and spectroscopy platform for surface and subsurface evaluation of food safety and quality. J FOOD ENG 2017; 198:17-27. [DOI: 10.1016/j.jfoodeng.2016.11.016] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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9
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Baruch D, Abookasis D. Multimodal optical setup based on spectrometer and cameras combination for biological tissue characterization with spatially modulated illumination. J Biomed Opt 2017; 22:46007. [PMID: 28425559 DOI: 10.1117/1.jbo.22.4.046007] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/17/2016] [Accepted: 03/29/2017] [Indexed: 06/07/2023]
Abstract
The application of optical techniques as tools for biomedical research has generated substantial interest for the ability of such methodologies to simultaneously measure biochemical and morphological parameters of tissue. Ongoing optimization of optical techniques may introduce such tools as alternative or complementary to conventional methodologies. The common approach shared by current optical techniques lies in the independent acquisition of tissue’s optical properties (i.e., absorption and reduced scattering coefficients) from reflected or transmitted light. Such optical parameters, in turn, provide detailed information regarding both the concentrations of clinically relevant chromophores and macroscopic structural variations in tissue. We couple a noncontact optical setup with a simple analysis algorithm to obtain absorption and scattering coefficients of biological samples under test. Technically, a portable picoprojector projects serial sinusoidal patterns at low and high spatial frequencies, while a spectrometer and two independent CCD cameras simultaneously acquire the reflected diffuse light through a single spectrometer and two separate CCD cameras having different bandpass filters at nonisosbestic and isosbestic wavelengths in front of each. This configuration fills the gaps in each other’s capabilities for acquiring optical properties of tissue at high spectral and spatial resolution. Experiments were performed on both tissue-mimicking phantoms as well as hands of healthy human volunteers to quantify their optical properties as proof of concept for the present technique. In a separate experiment, we derived the optical properties of the hand skin from the measured diffuse reflectance, based on a recently developed camera model. Additionally, oxygen saturation levels of tissue measured by the system were found to agree well with reference values. Taken together, the present results demonstrate the potential of this integrated setup for diagnostic and research applications.
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Affiliation(s)
- Daniel Baruch
- Ariel University, Department of Electrical and Electronics Engineering, Ariel, IsraelbAriel University, Department of Physics, Ariel, Israel
| | - David Abookasis
- Ariel University, Department of Electrical and Electronics Engineering, Ariel, Israel
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Danan Y, Yariv I, Zalevsky Z, Sinvani M. Improved Margins Detection of Regions Enriched with Gold Nanoparticles inside Biological Phantom. Materials (Basel) 2017; 10:E203. [PMID: 28772563 PMCID: PMC5459194 DOI: 10.3390/ma10020203] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/31/2016] [Revised: 02/12/2017] [Accepted: 02/14/2017] [Indexed: 02/06/2023]
Abstract
Utilizing the surface plasmon resonance (SPR) effect of gold nanoparticles (GNPs) enables their use as contrast agents in a variety of biomedical applications for diagnostics and treatment. These applications use both the very strong scattering and absorption properties of the GNPs due to their SPR effects. Most imaging methods use the light-scattering properties of the GNPs. However, the illumination source is in the same wavelength of the GNPs' scattering wavelength, leading to background noise caused by light scattering from the tissue. In this paper we present a method to improve border detection of regions enriched with GNPs aiming for the real-time application of complete tumor resection by utilizing the absorption of specially targeted GNPs using photothermal imaging. Phantoms containing different concentrations of GNPs were irradiated with a continuous-wave laser and measured with a thermal imaging camera which detected the temperature field of the irradiated phantoms. By modulating the laser illumination, and use of a simple post processing, the border location was identified at an accuracy of better than 0.5 mm even when the surrounding area got heated. This work is a continuation of our previous research.
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Affiliation(s)
- Yossef Danan
- Faculty of Engineering, Bar-Ilan University, Ramat-Gan 5290002, Israel.
- The Bar-Ilan Institute of Nanotechnology & Advanced Materials, Bar-Ilan University, Ramat-Gan 5290002, Israel.
| | - Inbar Yariv
- Faculty of Engineering, Bar-Ilan University, Ramat-Gan 5290002, Israel.
- The Bar-Ilan Institute of Nanotechnology & Advanced Materials, Bar-Ilan University, Ramat-Gan 5290002, Israel.
| | - Zeev Zalevsky
- Faculty of Engineering, Bar-Ilan University, Ramat-Gan 5290002, Israel.
- The Bar-Ilan Institute of Nanotechnology & Advanced Materials, Bar-Ilan University, Ramat-Gan 5290002, Israel.
| | - Moshe Sinvani
- Faculty of Engineering, Bar-Ilan University, Ramat-Gan 5290002, Israel.
- The Bar-Ilan Institute of Nanotechnology & Advanced Materials, Bar-Ilan University, Ramat-Gan 5290002, Israel.
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11
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Lu Y, Huang Y, Lu R. Innovative Hyperspectral Imaging-Based Techniques for Quality Evaluation of Fruits and Vegetables: A Review. Applied Sciences 2017; 7:189. [DOI: 10.3390/app7020189] [Citation(s) in RCA: 51] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
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Qin J, Kim M, Chao K, Chan D, Delwiche S, Cho B. Line-Scan Hyperspectral Imaging Techniques for Food Safety and Quality Applications. Applied Sciences 2017; 7:125. [DOI: 10.3390/app7020125] [Citation(s) in RCA: 46] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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Barion G, Mosca G, Vamerali T. Estimation of cotyledon isoflavone abundance by a grey luminance-based model in variously hilum-coloured soybean varieties. J Sci Food Agric 2016; 96:4126-34. [PMID: 26757482 DOI: 10.1002/jsfa.7613] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/07/2015] [Revised: 12/15/2015] [Accepted: 01/05/2016] [Indexed: 06/05/2023]
Abstract
BACKGROUND The nutraceutical uses of soybean (Glycine max L. Merr.) have received increasing attention in recent years, due to the therapeutic effects of high seed isoflavone concentrations against heart disease, cancer and menopausal symptoms. RESULTS We found a close correlation between seed isoflavone abundance and hilum colour in a set of 17 contrasting soybean varieties. Image analysis of the hilum grey level pattern allowed us to identify a power model which approximates total cotyledon isoflavone concentrations (TCIC) at 65-71% by the normalised modal grey level. Higher TCIC levels were assigned to darker hilum varieties and vice versa within a variety-dependent response. Optimisation of the algorithm required correction for a few specific varieties falling in the intermediate 1.1-1.5 mg g(-1) TCIC range, which were over-estimated by the model, perhaps due to variations in hilar optical properties related to the geometric features of both hilum and seed. CONCLUSION In view of its easy, low-cost detection, seed hilum colour is a useful phenotypic trait in soybean for rapid evaluation of isoflavone abundance in food uses and for improving specific nutraceutical breeding programmes. © 2016 Society of Chemical Industry.
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Affiliation(s)
- Giuseppe Barion
- Department of Agronomy, Food, Natural Resources, Animals and the Environment, University of Padova, Viale dell'Università 16, 35020 Legnaro, Padova, Italy
| | - Giuliano Mosca
- Department of Agronomy, Food, Natural Resources, Animals and the Environment, University of Padova, Viale dell'Università 16, 35020 Legnaro, Padova, Italy
| | - Teofilo Vamerali
- Department of Agronomy, Food, Natural Resources, Animals and the Environment, University of Padova, Viale dell'Università 16, 35020 Legnaro, Padova, Italy
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Abstract
There are, currently, 3 established clinical techniques routinely employed to determine the risk of ulceration in the diabetic foot. These are assessment of the circulation, the nervous control of sensation, and foot sensitivity to loading. Macrovascular measurements are used to assess sufficiency of the arterial supply to the foot. Evaluation of somatic neuropathy provides an indication of loss of plantar sensation. Skin pressure measurements indicate abnormalities in plantar loading. This combined approach is effective in allowing preventative measures to be applied prior to the onset of ulceration. In contrast, clinical measurement of microvascular function in the diabetic foot is uncommon. Indeed, there remains uncertainty regarding the importance of micro-vascular complications in the development of foot ulcers. This is in part due to the difficulty of making in vivo measurements of microvascular function. This article evaluates 3 noninvasive measurement techniques for routine micro-vascular assessment of the diabetic foot: transcutaneous oxygen tension, laser Doppler flowmetry, and near-infrared spectroscopy. These techniques can be used to obtain useful parameters of microvascular function including surface oxygen, blood flow, intracellular oxygenation, and cellular respiration. In principle, such measurements can be related to underlying pathophysiology, for example, microangiopathy or autonomic neuropathy. This article considers how these general techniques can be adapted to support routine clinical measurement of microvascular function, particularly in the neuropathic diabetic foot.
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Affiliation(s)
- J Cobb
- Academic Biomedical Engineering Research Group, School of Design Engineering and Computing, Bournemouth University, Poole House, Wallisdown Road, Poole, Dorset, UK.
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15
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Vardaki MZ, Matousek P, Stone N. Characterisation of signal enhancements achieved when utilizing a photon diode in deep Raman spectroscopy of tissue. Biomed Opt Express 2016; 7:2130-2141. [PMID: 27375932 PMCID: PMC4918570 DOI: 10.1364/boe.7.002130] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/01/2016] [Revised: 04/05/2016] [Accepted: 04/05/2016] [Indexed: 06/06/2023]
Abstract
We characterise the performance of a beam enhancing element ('photon diode') for use in deep Raman spectroscopy (DRS) of biological tissues. The optical component enhances the number of laser photons coupled into a tissue sample by returning escaping photons back into it at the illumination zone. The method is compatible with transmission Raman spectroscopy, a deep Raman spectroscopy concept, and its implementation leads to considerable enhancement of detected Raman photon rates. In the past, the enhancement concept was demonstrated with a variety of samples (pharmaceutical tablets, tissue, etc) but it was not systematically characterized with biological tissues. In this study, we investigate the enhancing properties of the photon diode in the transmission Raman geometry as a function of: a) the depth and b) the optical properties of tissue samples. Liquid tissue phantoms were employed to facilitate systematic variation of optical properties. These were chosen to mimic optical properties of human tissues, including breast and prostate. The obtained results evidence that a photon diode can enhance Raman signals of tissues by a maximum of × 2.4, although it can also decrease the signals created towards the back of samples that exhibit high scattering or absorption properties.
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Affiliation(s)
- Martha Z Vardaki
- School of Physics and Astronomy, College of Engineering, Mathematics and Physical Sciences, University of Exeter, Exeter EX4 4QL, UK
| | - Pavel Matousek
- Central Laser Facility, Research Complex at Harwell, STFC Rutherford Appleton Laboratory, Harwell Oxford, OX11 0QX, UK;
| | - Nicholas Stone
- School of Physics and Astronomy, College of Engineering, Mathematics and Physical Sciences, University of Exeter, Exeter EX4 4QL, UK;
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Aernouts B, Erkinbaev C, Watté R, Van Beers R, Do Trong NN, Nicolai B, Saeys W. Estimation of bulk optical properties of turbid media from hyperspectral scatter imaging measurements: metamodeling approach. Opt Express 2015; 23:26049-26063. [PMID: 26480120 DOI: 10.1364/oe.23.026049] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
In many research areas and application domains, the bulk optical properties of biological materials are of great interest. Unfortunately, these properties cannot be obtained easily for complex turbid media. In this study, a metamodeling approach has been proposed and applied for the fast and accurate estimation of the bulk optical properties from contactless and non-destructive hyperspectral scatter imaging (HSI) measurements. A set of liquid optical phantoms, based on intralipid, methylene blue and water, were prepared and the Vis/NIR bulk optical properties were characterized with a double integrating sphere and unscattered transmittance setup. Accordingly, the phantoms were measured with the HSI technique and metamodels were constructed, relating the Vis/NIR reflectance images to the reference bulk optical properties of the samples. The independent inverse validation showed good prediction performance for the absorption coefficient and the reduced scattering coefficient, with R(2)(p) values of 0.980 and 0.998, and RMSE(P) values of 0.032 cm(-1) and 0.197 cm(-1) respectively. The results clearly support the potential of this approach for fast and accurate estimation of the bulk optical properties of turbid media from contactless HSI measurements.
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Arefi A, Moghaddam PA, Mollazade K, Hassanpour A, Valero C, Gowen A. Mealiness Detection in Agricultural Crops: Destructive and Nondestructive Tests: A Review. Compr Rev Food Sci Food Saf 2015. [DOI: 10.1111/1541-4337.12152] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Arman Arefi
- Dept. of Biosystems Engineering; Faculty of Agriculture, Urmia Univ; Urmia Iran
| | | | - Kaveh Mollazade
- Dept. of Biosystems Engineering; Faculty of Agriculture, Univ. of Kurdistan; Sanandaj Iran
| | - Ali Hassanpour
- Dept. of Biosystems Engineering; Faculty of Agriculture, Urmia Univ; Urmia Iran
| | | | - Aoife Gowen
- School of Biosystems Engineering; College of Engineering and Architecture, Univ. College Dublin; Ireland
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Zhou Y, Fu X, Ying Y, Fang Z. An integrated fiber-optic probe combined with support vector regression for fast estimation of optical properties of turbid media. Anal Chim Acta 2015; 880:122-9. [DOI: 10.1016/j.aca.2015.04.048] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/05/2015] [Revised: 04/03/2015] [Accepted: 04/23/2015] [Indexed: 10/23/2022]
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19
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Yariv I, Rahamim G, Shliselberg E, Duadi H, Lipovsky A, Lubart R, Fixler D. Detecting nanoparticles in tissue using an optical iterative technique. Biomed Opt Express 2014; 5:3871-3881. [PMID: 25426317 PMCID: PMC4242024 DOI: 10.1364/boe.5.003871] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/17/2014] [Revised: 07/16/2014] [Accepted: 09/24/2014] [Indexed: 05/30/2023]
Abstract
Determining the physical penetration depth of nanoparticles (NPs) into tissues is a challenge that many researchers have been facing in recent years. This paper presents a new noninvasive method for detecting NPs in tissue using an optical iterative technique based on the Gerchberg-Saxton (G-S) algorithm. At the end of this algorithm the reduced scattering coefficient (µs'), of a given substance, can be estimated from the standard deviation (STD) of the retrieved phase of the remitted light. Presented in this paper are the results of a tissue simulation which indicate a linear ratio between the STD and the scattering components. A linear ratio was also observed in the tissue-like phantoms and in ex vivo experiments with and without NPs (Gold nanorods and nano Methylene Blue). The proposed technique is the first step towards determining the physical penetration depth of NPs.
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Affiliation(s)
- Inbar Yariv
- Faculty of Engineering and the Institute of Nanotechnology and Advanced Materials, Bar Ilan University, Ramat Gan 5290002,
Israel
| | - Gilad Rahamim
- Faculty of Engineering and the Institute of Nanotechnology and Advanced Materials, Bar Ilan University, Ramat Gan 5290002,
Israel
| | - Elad Shliselberg
- Faculty of Engineering and the Institute of Nanotechnology and Advanced Materials, Bar Ilan University, Ramat Gan 5290002,
Israel
| | - Hamootal Duadi
- Faculty of Engineering and the Institute of Nanotechnology and Advanced Materials, Bar Ilan University, Ramat Gan 5290002,
Israel
| | - Anat Lipovsky
- Faculty of Engineering and the Institute of Nanotechnology and Advanced Materials, Bar Ilan University, Ramat Gan 5290002,
Israel
| | - Rachel Lubart
- Physics and Chemistry Department, Bar-Ilan University, Ramat-Gan 5290002,
Israel
| | - Dror Fixler
- Faculty of Engineering and the Institute of Nanotechnology and Advanced Materials, Bar Ilan University, Ramat Gan 5290002,
Israel
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20
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Yuen C, Liu Q. Towards in vivo intradermal surface enhanced Raman scattering (SERS) measurements: silver coated microneedle based SERS probe. J Biophotonics 2014; 7:683-689. [PMID: 23666825 DOI: 10.1002/jbio.201300006] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/07/2013] [Revised: 03/26/2013] [Accepted: 04/21/2013] [Indexed: 06/02/2023]
Abstract
We propose a microneedle coated with silver (Ag) to detect analytes at low concentrations positioned at a depth of more than 700 μm below the surface of a skin phantom with absorbers and scatterers for mimicking the intradermal surface-enhanced Raman scattering (SERS) measurements. The Ag layer in the Ag-coated microneedle-based probe is found to be the key to the effective detection of analytes buried inside the aforesaid phantom. Glucose concentrations ranging from 5 to 150 mM inside phantoms can be estimated with a root mean square error (RMSE) of 3.3 mM. This work shows the potential of using microneedles for simple in vivo intradermal SERS measurements of analytes with clinical relevance.
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Affiliation(s)
- Clement Yuen
- Division of Bioengineering, School of Chemical and Biomedical Engineering, Nanyang Technological University, 70 Nanyang Drive, Singapore 637457, Singapore
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21
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Watté R, Do Trong NN, Aernouts B, Erkinbaev C, De Baerdemaeker J, Nicolaï B, Saeys W. Metamodeling approach for efficient estimation of optical properties of turbid media from spatially resolved diffuse reflectance measurements. Opt Express 2013; 21:32630-42. [PMID: 24514857 DOI: 10.1364/oe.21.032630] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/19/2023]
Abstract
A metamodeling approach is introduced and applied to efficiently estimate the bulk optical properties of turbid media from spatially resolved spectroscopy (SRS) measurements. The model has been trained on a set of liquid phantoms covering a wide range of optical properties representative for food and agricultural products and was successfully validated in forward and inverse mode on phantoms not used for training the model. With relative prediction errors of 10% for the estimated bulk optical properties the potential of this metamodeling approach for the estimation of the optical properties of turbid media from spatially resolved spectroscopy measurements has been demonstrated.
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22
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Ankri R, Peretz D, Motiei M, Sella-Tavor O, Popovtzer R. New optical method for enhanced detection of colon cancer by capsule endoscopy. Nanoscale 2013; 5:9806-9811. [PMID: 23969635 DOI: 10.1039/c3nr02396f] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/02/2023]
Abstract
PillCam®COLON capsule endoscopy (CE), a non-invasive diagnostic tool of the digestive tract, has dramatically changed the diagnostic approach and has become an attractive alternative to the conventional colonoscopy for early detection of colorectal cancer. However, despite the significant progress and non-invasive detection capability, studies have shown that its sensitivity and specificity is lower than that of conventional colonoscopy. This work presents a new optical detection method, specifically tailored to colon cancer detection and based on the well-known optical properties of immune-conjugated gold nanorods (GNRs). We show, on a colon cancer model implanted in a chick chorioallantoic membrane (CAM), that this detection method enables conclusive differentiation between cancerous and normal tissues, where neither the distance between the light source and the intestinal wall, nor the background signal, affects the monitored signal. This optical method, which can easily be integrated in CE, is expected to reduce false positive and false negative results and improve identification of tumors and micro metastases.
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Affiliation(s)
- Rinat Ankri
- Bar-Ilan University, Faculty of Engineering & Institute of Nanotechnology & Advanced Materials, Ramat Gan 52900, Israel.
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23
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Ankri R, Meiri A, Lau SI, Motiei M, Popovtzer R, Fixler D. Intercoupling surface plasmon resonance and diffusion reflection measurements for real-time cancer detection. J Biophotonics 2013; 6:188-96. [PMID: 22461296 DOI: 10.1002/jbio.201200016] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/05/2012] [Revised: 03/12/2012] [Accepted: 03/12/2012] [Indexed: 05/11/2023]
Abstract
Spatial diffusion reflection (DR) measurements of gold nanorods (GNR) were recently suggested as a simple and highly sensitive non-invasive and non-ionizing method for real-time cancer detection. In this paper we demonstrate that wavelength dependent DR measurements enable the spectral red-shift observation of highly concentrated GNR. By conjugating targeting moieties to the GNR, large density of GNR can specifically home onto cancer cells. The inter-particle plasmon resonance pattern of the highly concentrated GNR leads to an extension and a red-shift (Δλ) in the absorption spectrum of the concentrated GNR. Dark-field microscopy was used in order to measure the expected Δλ in different GNR concentrations in vitro. Double-wavelength DR measurements of tissue-like phantoms and tumor bearing mice containing different GNR concentrations are presented. We show that the DR profile of the highly concentrated GNR directly correlate with the spectral extension and red-shift. This presented work suggests that wavelength dependent DR method can serve as a promising tool for real-time superficial tumor detection.
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Affiliation(s)
- Rinat Ankri
- Faculty of Engineering and the Institute of Nanotechnology and Advanced Materials, Bar Ilan University, Ramat Gan, 52900, Israel
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24
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Grabtchak S, Whelan WM. Separation of absorption and scattering properties of turbid media using relative spectrally resolved cw radiance measurements. Biomed Opt Express 2012; 3:2371-80. [PMID: 23082279 PMCID: PMC3469994 DOI: 10.1364/boe.3.002371] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/12/2012] [Revised: 08/27/2012] [Accepted: 08/27/2012] [Indexed: 05/10/2023]
Abstract
We present a new method for extracting the effective attenuation coefficient and the diffusion coefficient from relative spectrally resolved cw radiance measurements using the diffusion approximation. The method is validated on both simulated and experimental radiance data sets using Intralipid-1% as a test platform. The effective attenuation coefficient is determined from a simple algebraic expression constructed from a ratio of two radiance measurements at two different source-detector separations and the same 90° angle. The diffusion coefficient is determined from another ratio constructed from two radiance measurements at two angles (0° and 180°) and the same source-detector separation. The conditions of the validity of the method as well as possible practical applications are discussed.
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Affiliation(s)
- Serge Grabtchak
- Department of Physics, University of Prince Edward Island, Charlottetown, PEI C1A4P3, Canada
- Department of Electrical and Computer Engineering, Dalhousie University, Halifax, NS B3J1Z1, Canada
- Department of Physics, Dalhousie University, Halifax, NS B3H3J5, Canada
| | - William M. Whelan
- Department of Physics, University of Prince Edward Island, Charlottetown, PEI C1A4P3, Canada
- Atlantic Veterinary College, Charlottetown, PEI C1A4P3, Canada
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25
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Jakobsohn K, Motiei M, Sinvani M, Popovtzer R. Towards real-time detection of tumor margins using photothermal imaging of immune-targeted gold nanoparticles. Int J Nanomedicine 2012; 7:4707-13. [PMID: 22956871 PMCID: PMC3431967 DOI: 10.2147/ijn.s34157] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022] Open
Abstract
BACKGROUND One of the critical problems in cancer management is local recurrence of disease. Between 20% and 30% of patients who undergo tumor resection surgery require reoperation due to incomplete excision. Currently, there are no validated methods for intraoperative tumor margin detection. In the present work, we demonstrate the potential use of gold nanoparticles (GNPs) as a novel contrast agent for photothermal molecular imaging of cancer. METHODS Phantoms containing different concentrations of GNPs were irradiated with continuous-wave laser and measured with a thermal imaging camera which detected the temperature field of the irradiated phantoms. RESULTS The results clearly demonstrate the ability to distinguish between cancerous cells specifically targeted with GNPs and normal cells. This technique, which allows highly sensitive discrimination between adjacent low GNP concentrations, will allow tumor margin detection while the temperature increases by only a few degrees Celsius (for GNPs in relevant biological concentrations). CONCLUSION We expect this real-time intraoperative imaging technique to assist surgeons in determining clear tumor margins and to maximize the extent of tumor resection while sparing normal background tissue.
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Affiliation(s)
- Kobi Jakobsohn
- Faculty of Engineering, Institute of Nanotechnology and Advanced Materials, Bar Ilan University, Ramat Gan, Israel
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26
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Ankri R, Duadi H, Motiei M, Fixler D. In-vivo Tumor detection using diffusion reflection measurements of targeted gold nanorods - a quantitative study. J Biophotonics 2012; 5:263-73. [PMID: 22234916 DOI: 10.1002/jbio.201100120] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/06/2011] [Revised: 12/15/2011] [Accepted: 12/16/2011] [Indexed: 05/20/2023]
Abstract
The ability to quantitatively and non-invasively detect nanoparticles has important implications on their development as an in-vivo cancer diagnostic tool. The Diffusion Reflection (DR) method is a simple, non-invasive imaging technique which has been proven useful for the investigation of tissue's optical parameters. In this study, Monte Carlo (MC) simulations, tissue-like phantom experiments and in-vivo measurements of the reflected light intensity from tumor bearing mice are presented. Following intravenous injection of antibody conjugated poly (ethylene glycol)-coated (PEGylated) gold nanorods (GNR) to tumor-bearing mice, accumulation of GNR in the tumor was clearly detected by the DR profile of the tumor. The ability of DR measurements to quantitate in-vivo the concentration of the GNR in the tumor was demonstrated and validated with Flame Atomic Absorption spectroscopy results. With GNR as absorbing contrast agents, DR has important potential applications in the image guided therapy of superficial tumors such as head and neck cancer, breast cancer and melanoma.
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Affiliation(s)
- Rinat Ankri
- Faculty of Engineering and the Institute of Nanotechnology and Advanced Materials, Bar Ilan University, Ramat Gan, 52900, Israel
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27
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Ankri R, Peretz V, Motiei M, Popovtzer R, Fixler D. A new method for cancer detection based on diffusion reflection measurements of targeted gold nanorods. Int J Nanomedicine 2012; 7:449-55. [PMID: 22334777 PMCID: PMC3273979 DOI: 10.2147/ijn.s28424] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022] Open
Abstract
This paper presents a new method for cancer detection based on diffusion reflection measurements. This method enables discrimination between cancerous and noncancerous tissues due to the intense light absorption of gold nanorods (GNRs), which are selectively targeted to squamous cell carcinoma head and neck cancer cells. Presented in this paper are tissue-like phantom and in vivo results that demonstrate the high sensitivity of diffusion reflection measurements to the absorption differences between the GNR-targeted cancerous tissue and normal, noncancerous tissue. This noninvasive and nonionizing optical detection method provides a highly sensitive, simple, and inexpensive tool for cancer detection.
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Affiliation(s)
- Rinat Ankri
- Faculty of Engineering and the Institute of Nanotechnology and Advanced Materials, Bar Ilan University, Ramat Gan 52900, Israel
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28
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Abstract
Experimental measurements of the reflected light intensity from two-layer phantoms are presented. We report, for the first time, an experimental observation of a typical reflected light intensity behavior for the two-layer structure characterized by two different slopes in the reflected light profile of the irradiated tissue. The point in which the first slope changes to the second slope, named as the crossover point, depends on the upper layer thickness as well as on the ratio between the absorption coefficients of the two layers. Since similar experiments from one-layer phantoms present a monotonic decay behavior, the existence and the location of the crossover point can be used as a diagnostic fingerprint for two-layer tissue structures. This pertains to two layers with greater absorptivity in the upper layer, which is the typical biological case in tissues like skin.
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Affiliation(s)
- Rinat Ankri
- Bar Ilan University, School of Engineering and the Institute of Nanotechnology and Advanced Materials, Ramat Gan, 52900, Israel
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29
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Grabtchak S, Palmer TJ, Whelan WM. Detection of localized inclusions of gold nanoparticles in Intralipid-1% by point-radiance spectroscopy. J Biomed Opt 2011; 16:077003. [PMID: 21806283 DOI: 10.1117/1.3597624] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/10/2023]
Abstract
Interstitial fiber-optic-based approaches used in both diagnostic and therapeutic applications rely on localized light-tissue interactions. We present an optical technique to identify spectrally and spatially specific exogenous chromophores in highly scattering turbid media. Point radiance spectroscopy is based on directional light collection at a single point with a side-firing fiber that can be rotated up to 360 deg. A side firing fiber accepts light within a well-defined, solid angle, thus potentially providing an improved spatial resolution. Measurements were performed using an 800-μm diameter isotropic spherical diffuser coupled to a halogen light source and a 600 μm, ∼43 deg cleaved fiber (i.e., radiance detector). The background liquid-based scattering phantom was fabricated using 1% Intralipid. Light was collected with 1 deg increments through 360 deg-segment. Gold nanoparticles , placed into a 3.5-mm diameter capillary tube were used as localized scatterers and absorbers introduced into the liquid phantom both on- and off-axis between source and detector. The localized optical inhomogeneity was detectable as an angular-resolved variation in the radiance polar plots. This technique is being investigated as a potential noninvasive optical modality for prostate cancer monitoring.
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Affiliation(s)
- Serge Grabtchak
- University of Prince Edward Island, Department of Physics, Charlottetown, Prince Edward Island Canada C1A 4P3.
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30
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31
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Tseng TY, Chen CY, Li YS, Sung KB. Quantification of the optical properties of two-layered turbid media by simultaneously analyzing the spectral and spatial information of steady-state diffuse reflectance spectroscopy. Biomed Opt Express 2011; 2:901-14. [PMID: 21483612 PMCID: PMC3072129 DOI: 10.1364/boe.2.000914] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Received: 01/25/2011] [Revised: 02/17/2011] [Accepted: 03/06/2011] [Indexed: 05/21/2023]
Abstract
We applied hyperspectral imaging to measure spatially-resolved diffuse reflectance spectra in the visible range and an iterative inversion method based on forward Monte Carlo modeling to quantify optical properties of two-layered tissue models. We validated the inversion method using spectra experimentally measured from liquid tissue mimicking phantoms with known optical properties. Results of fitting simulated data showed that simultaneously considering the spatial and spectral information in the inversion process improves the accuracies of estimating the optical properties and the top layer thickness in comparison to methods fitting reflectance spectra measured with a single source-detector separation or fitting spatially-resolved reflectance at a single wavelength. Further development of the method could improve noninvasive assessment of physiological status and pathological conditions of stratified squamous epithelium and superficial stroma.
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Affiliation(s)
- Te-Yu Tseng
- Graduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan University, Taipei, Taiwan
| | - Chun-Yu Chen
- Graduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan University, Taipei, Taiwan
| | - Yi-Shan Li
- Graduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan University, Taipei, Taiwan
| | - Kung-Bin Sung
- Graduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan University, Taipei, Taiwan
- Department of Electrical Engineering, National Taiwan University, Taipei, Taiwan
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32
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Tseng TY, Chen CY, Li YS, Sung KB. Quantification of the optical properties of two-layered turbid media by simultaneously analyzing the spectral and spatial information of steady-state diffuse reflectance spectroscopy. Biomed Opt Express 2011. [PMID: 21483612 DOI: 10.1364/boe.2.000901] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/03/2023]
Abstract
We applied hyperspectral imaging to measure spatially-resolved diffuse reflectance spectra in the visible range and an iterative inversion method based on forward Monte Carlo modeling to quantify optical properties of two-layered tissue models. We validated the inversion method using spectra experimentally measured from liquid tissue mimicking phantoms with known optical properties. Results of fitting simulated data showed that simultaneously considering the spatial and spectral information in the inversion process improves the accuracies of estimating the optical properties and the top layer thickness in comparison to methods fitting reflectance spectra measured with a single source-detector separation or fitting spatially-resolved reflectance at a single wavelength. Further development of the method could improve noninvasive assessment of physiological status and pathological conditions of stratified squamous epithelium and superficial stroma.
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33
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Cen H, Lu R. Optimization of the hyperspectral imaging-based spatially-resolved system for measuring the optical properties of biological materials. Opt Express 2010; 18:17412-32. [PMID: 20721128 DOI: 10.1364/oe.18.017412] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/19/2023]
Abstract
This paper reports on the optimization and assessment of a hyperspectral imaging-based spatially-resolved system for determination of the optical properties of biological materials over the wavelengths of 500-1,000 nm. Twelve model samples covering a wide range of absorption and reduced scattering coefficients were created to validate the hyperspectral imaging system, and their true values of absorption and reduced scattering coefficients were determined and then cross-validated using three commonly used methods (i.e., transmittance, integrating sphere, and empirical equation). Light beam and source-detector distance were optimized through Monte Carlo simulations and experiments for the model samples. The optimal light beam should be of Gaussian type with the diameter of less than 1 mm, and the optimal minimum and maximum source-detector distance should be 1.5 mm and 10-20 mean free paths, respectively. The optimized hyperspectral imaging-based spatially-resolved system achieved good estimation of the optical parameters.
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Affiliation(s)
- Haiyan Cen
- Department of Biosystems and Agricultural Engineering, 105A Farrall Hall, Michigan State University, East Lansing, Michigan 48824, USA
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34
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Wollina U, Konrad H, Schmidt WD, Haroske G, Astafeva LG, Fassler D. Response of spider leg veins to pulsed diode laser (810 nm): a clinical, histological and remission spectroscopy study. J COSMET LASER THER 2009; 5:154-62. [PMID: 14741819 DOI: 10.1080/14764170310017071] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
Abstract
BACKGROUND Spider leg veins are common. Their treatment with laser or intensed light therapy shows generally variable success rates and often adverse side effects such as hyper- or hypopigmentation. This study was performed to investigate whether pulsed diode laser (810 nm) treatment is effective and safe. METHODS Thirty-five female patients with spider leg veins were included in this prospective trial. They were treated twice with a pulsed diode laser (810 nm; spot size 12 mm, frequency 2-4 Hz, pulse width 60 msec, fluence 80-100 Jcm(-2)). Laser therapy was performed on day 0 and day 14. Clinical assessments were carried out before and immediately after the first laser therapy, after 2 weeks, 8 weeks, and one year. Skin biopsies were taken before and immediately after the first laser treatment, and after 10 weeks. Contact-free remittance spectroscopy was performed before laser treatment, immediately after the first treatment, after 2 weeks and 8 weeks. RESULTS After the first treatment 15 patients showed a complete disappearance (CR) of spider leg veins; in the remaining 20 patients a remarkable improvement (RI) was noted (n=35). After six months of follow-up CR was seen in 6 patients, RI in 6, a stable situation in 9, and scar formation in 1 patient (n=21). The effect was almost completely stable during one year of follow-up. The examination of histological specimens before and after laser treatment showed no cellular inflammatory reaction. The mean vascular area was significantly reduced after the first (p<0.05) and after the second (p<0.05) laser treatment. Spectral analysis showed a marked decrease of peaks for oxygenized haemoglobin immediately after laser treatment and during the follow-up. Safety profile was excellent without purpuric reaction or pigmentary changes. Mild scarring was observed in two patients at the end of follow-up. CONCLUSIONS Pulsed diode laser therapy (810 nm) is an effective and safe treatment option for spider leg veins. The effects can be seen immediately. Objective monitoring by non-invasive remission spectroscopy and histology of biopsy specimens demonstrates selectivity of the laser action.
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Affiliation(s)
- U Wollina
- Department of Dermatology, Hospital Dresden-Friedrichstadt, Friedrichstrasse 41, 01067 Dresden, Germany.
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35
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Abstract
In-vivo imaging of optical contrast in living tissues can allow measurement of functional parameters such as blood oxygenation and detection of targeted and active fluorescent contrast agents. However, optical imaging must overcome the effects of light scattering, which limit the penetration depth and can affect quantitation and sensitivity. This article focuses on a technique for high-resolution, high-speed depth-resolved optical imaging of superficial living tissues called laminar optical tomography (LOT), which is capable of imaging absorbing and fluorescent contrast in living tissues to depths of 2-3 mm with 100-200 micron resolution. An overview of the advantages and challenges of in-vivo optical imaging is followed by a review of currently available techniques for high-resolution optical imaging of tissues. LOT is then described, including a description of the imaging system design and discussion of data analysis and image reconstruction approaches. Examples of recent applications of LOT are then provided and compared to other existing technologies.By measuring multiply-scattered light, Laminar Optical Tomography can probe beneath the surface of living tissues such as the skin and brain.
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36
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Krishnaswamy V, Hoopes PJ, Samkoe KS, O'Hara JA, Hasan T, Pogue BW. Quantitative imaging of scattering changes associated with epithelial proliferation, necrosis, and fibrosis in tumors using microsampling reflectance spectroscopy. J Biomed Opt 2009; 14:014004. [PMID: 19256692 PMCID: PMC2813673 DOI: 10.1117/1.3065540] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/03/2023]
Abstract
Highly localized reflectance measurements can be used to directly quantify scatter changes in tissues. We present a microsampling approach that is used to raster scan tumors to extract parameters believed to be related to the tissue ultrastructure. A confocal reflectance imager was developed to examine scatter changes across pathologically distinct regions within tumor tissues. Tissue sections from two murine tumors, AsPC-1 pancreas tumor and the Mat-LyLu Dunning prostate tumor, were imaged. After imaging, histopathology-guided region-of-interest studies of the images allowed analysis of the variations in scattering resulting from differences in tissue ultra-structure. On average, the median scatter power of tumor cells with high proliferation index (HPI) was about 26% less compared to tumor cells with low proliferation index (LPI). Necrosis exhibited the lowest scatter power signature across all the tissue types considered, with about 55% lower median scatter power than LPI tumor cells. Additionally, the level and maturity of the tumor's fibroplastic response was found to influence the scatter signal. This approach to scatter visualization of tissue ultrastructure in situ could provide a unique tool for guiding surgical resection, but this kind of interpretation into what the signal means relative to the pathology is required before proceeding to clinical studies.
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37
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Bechtel KL, Shih WC, Feld MS. Intrinsic Raman spectroscopy for quantitative biological spectroscopy part II: experimental applications. Opt Express 2008; 16:12737-45. [PMID: 18711512 PMCID: PMC2845389 DOI: 10.1364/oe.16.012737] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/20/2023]
Abstract
We demonstrate the effectiveness of intrinsic Raman spectroscopy (IRS) at reducing errors caused by absorption and scattering. Physical tissue models, solutions of varying absorption and scattering coefficients with known concentrations of Raman scatterers, are studied. We show significant improvement in prediction error by implementing IRS to predict concentrations of Raman scatterers using both ordinary least squares regression (OLS) and partial least squares regression (PLS). In particular, we show that IRS provides a robust calibration model that does not increase in error when applied to samples with optical properties outside the range of calibration.
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Affiliation(s)
- Kate L Bechtel
- GR Harrison Spectroscopy Laboratory, Massachusetts Institute of Technology, 77 Massachusetts Avenue,Cambridge, MA 02139, USA
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38
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Abstract
We present a novel technique, intrinsic Raman spectroscopy (IRS), to correct turbidity-induced Raman spectral distortions, resulting in the intrinsic Raman spectrum that would be observed in the absence of scattering and absorption. We develop an expression relating the observed and intrinsic Raman spectra through diffuse reflectance using the photon migration depiction of light transport. Numerical simulations are employed to validate the theoretical results and study the dependence of this expression on sample size and elastic scattering anisotropy.
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39
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Abstract
A novel method to determine the optical properties, namely, absorption coefficient, scattering coefficient, and anisotropy factor of turbid solutions, single constituent or multiconstituent, is presented. Turbid solutions of milk, ink, and a mixture of both were illuminated by a laser beam and measurements were carried out in scattered light. Experimental results were matched to the corresponding results of Monte Carlo simulation to obtain the optical properties of the turbid media.
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40
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Abstract
A hyperspectral imaging system in line scanning mode was used for measuring the absorption and scattering properties of turbid food materials over the visible and near-infrared region of 530-900 nm. An instrumental calibration procedure was developed to compensate for the nonuniform instrument response of the imaging system. A nonlinear curve-fitting algorithm for a steady-state diffusion theory model was proposed to determine absorption (mua) and reduced scattering coefficients (mu's) from the spatially resolved hyperspectral reflectance profiles. The hyperspectral imaging system provided good measurement of mua and mu's for the simulation samples made of Intralipid scattering material and three absorbers (blue dye, green dye, and black ink) with average fitting errors of 16% and 11%, respectively. The optical properties of the fruit and vegetable juices and milks were determined. Values of the absorption and reduced scattering coefficient at 600 nm were highly correlated to the fat content of the milk samples with the correlation coefficient of 0.995 and 0.998, respectively. Compared to time-resolved and frequency-domain techniques, the hyperspectral imaging technique provides a faster and simpler means for measuring the optical properties of turbid food and agricultural products.
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Affiliation(s)
- Jianwei Qin
- Department of Biosystems and Agricultural Engineering, Michigan State University, East Lansing, Michigan 48824, USA
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41
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Qin J, Lu R. Hyperspectral diffuse reflectance imaging for rapid, noncontact measurement of the optical properties of turbid materials. Appl Opt 2006; 45:8366-73. [PMID: 17068584 DOI: 10.1364/ao.45.008366] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/04/2023]
Abstract
We present a method and technique of using hyperspectral diffuse reflectance for rapid determination of the optical properties of turbid media. A hyperspectral imaging system in line scanning mode was used to acquire spatial diffuse reflectance profiles from liquid phantoms made up of absorbing dyes and fat emulsion scatterers over the spectral range of 450-1000 nm instantaneously. The hyperspectral reflectance data were analyzed by using a steady-state diffusion approximation model for semi-infinite homogeneous media. A calibration procedure was developed to compensate the nonuniform instrument response of the imaging system, and a curve-fitting algorithm was used to extract absorption and reduced scattering coefficients (mua and mus', respectively) for the phantoms in the wavelength range from 530 to 900 nm. The hyperspectral imaging system gave good measures of mua and mus' for the phantoms with average fitting errors of 12% and 7%, respectively. The hyperspectral imaging technique is fast, noncontact, and easy to use, which makes it especially suitable for measurement of the optical properties of turbid liquid and solid foods.
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Affiliation(s)
- Jianwei Qin
- Department of Biosystems and Agricultural Engineering, Michigan State University, East Lansing 48824, USA
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Sharma D, Agrawal A, Matchette LS, Pfefer TJ. Evaluation of a fiberoptic-based system for measurement of optical properties in highly attenuating turbid media. Biomed Eng Online 2006; 5:49. [PMID: 16928274 PMCID: PMC1570472 DOI: 10.1186/1475-925x-5-49] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/04/2006] [Accepted: 08/23/2006] [Indexed: 11/27/2022] Open
Abstract
Background Accurate measurements of the optical properties of biological tissue in the ultraviolet A and short visible wavelengths are needed to achieve a quantitative understanding of novel optical diagnostic devices. Currently, there is minimal information on optical property measurement approaches that are appropriate for in vivo measurements in highly absorbing and scattering tissues. We describe a novel fiberoptic-based reflectance system for measurement of optical properties in highly attenuating turbid media and provide an extensive in vitro evaluation of its accuracy. The influence of collecting reflectance at the illumination fiber on estimation accuracy is also investigated. Methods A neural network algorithm and reflectance distributions from Monte Carlo simulations were used to generate predictive models based on the two geometries. Absolute measurements of diffuse reflectance were enabled through calibration of the reflectance system. Spatially-resolved reflectance distributions were measured in tissue phantoms at 405 nm for absorption coefficients (μa) from 1 to 25 cm-1 and reduced scattering coefficients (μ′s
MathType@MTEF@5@5@+=feaafiart1ev1aaatCvAUfKttLearuWrP9MDH5MBPbIqV92AaeXatLxBI9gBaebbnrfifHhDYfgasaacH8akY=wiFfYdH8Gipec8Eeeu0xXdbba9frFj0=OqFfea0dXdd9vqai=hGuQ8kuc9pgc9s8qqaq=dirpe0xb9q8qiLsFr0=vr0=vr0dc8meaabaqaciaacaGaaeqabaqabeGadaaakeaacuaH8oqBgaqbamaaBaaaleaacqqGZbWCaeqaaaaa@3007@) from 5 to 25 cm-1. These data and predictive models were used to estimate the optical properties of tissue-simulating phantoms. Results By comparing predicted and known optical properties, the average errors for μa and μ′s
MathType@MTEF@5@5@+=feaafiart1ev1aaatCvAUfKttLearuWrP9MDH5MBPbIqV92AaeXatLxBI9gBaebbnrfifHhDYfgasaacH8akY=wiFfYdH8Gipec8Eeeu0xXdbba9frFj0=OqFfea0dXdd9vqai=hGuQ8kuc9pgc9s8qqaq=dirpe0xb9q8qiLsFr0=vr0=vr0dc8meaabaqaciaacaGaaeqabaqabeGadaaakeaacuaH8oqBgaqbamaaBaaaleaacqqGZbWCaeqaaaaa@3007@ were found to be 3.0% and 4.6%, respectively, for a linear probe approach. When bifurcated probe data was included and samples with μa values less than 5 cm-1 were excluded, predictive errors for μa and μ′s
MathType@MTEF@5@5@+=feaafiart1ev1aaatCvAUfKttLearuWrP9MDH5MBPbIqV92AaeXatLxBI9gBaebbnrfifHhDYfgasaacH8akY=wiFfYdH8Gipec8Eeeu0xXdbba9frFj0=OqFfea0dXdd9vqai=hGuQ8kuc9pgc9s8qqaq=dirpe0xb9q8qiLsFr0=vr0=vr0dc8meaabaqaciaacaGaaeqabaqabeGadaaakeaacuaH8oqBgaqbamaaBaaaleaacqqGZbWCaeqaaaaa@3007@ were further reduced to 1.8% and 3.5%. Conclusion Improvements in system design have led to significant reductions in optical property estimation error. While the incorporation of a bifurcated illumination fiber shows promise for improving the accuracy of μ′s
MathType@MTEF@5@5@+=feaafiart1ev1aaatCvAUfKttLearuWrP9MDH5MBPbIqV92AaeXatLxBI9gBaebbnrfifHhDYfgasaacH8akY=wiFfYdH8Gipec8Eeeu0xXdbba9frFj0=OqFfea0dXdd9vqai=hGuQ8kuc9pgc9s8qqaq=dirpe0xb9q8qiLsFr0=vr0=vr0dc8meaabaqaciaacaGaaeqabaqabeGadaaakeaacuaH8oqBgaqbamaaBaaaleaacqqGZbWCaeqaaaaa@3007@ estimates, further study of this approach is needed to elucidate the source of discrepancies between measurements and simulation results at low μa values.
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Affiliation(s)
- Divyesh Sharma
- Food and Drug Administration, Center for Devices and Radiological Health, Rockville, Maryland, USA
| | - Anant Agrawal
- Food and Drug Administration, Center for Devices and Radiological Health, Rockville, Maryland, USA
| | - L Stephanie Matchette
- Food and Drug Administration, Center for Devices and Radiological Health, Rockville, Maryland, USA
| | - T Joshua Pfefer
- Food and Drug Administration, Center for Devices and Radiological Health, Rockville, Maryland, USA
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Abstract
Raman scattering in single-mode optical fibers is exploited to generate multispectral light from a green nanolaser with high pulse repetition rate. Each pulse triggers a picosecond camera and measures the distance by time-of-flight in each of the 0.5 Mpixels. Three-dimensional images are then constructed with submillimeter accuracy for all visible colors. The generation of a series of Stokes peaks by Raman scattering in a Si fiber is discussed in detail and the laser radar technique is demonstrated. The data recording takes only a few seconds, and the high accuracy 3D color imaging works at ranges up to approximately 200 m. Applications for optical tomography in highly scattering media such as water and human tissue are mentioned.
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Affiliation(s)
- Joachim F Andersen
- Danish Defense Research Establishment, Ryvanges Allé 1, DK-2100 Copenhagen, Denmark
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Dam JS, Yavari N, Sørensen S, Andersson-Engels S. Real-time absorption and scattering characterization of slab-shaped turbid samples obtained by a combination of angular and spatially resolved measurements. Appl Opt 2005; 44:4281-90. [PMID: 16045216 DOI: 10.1364/ao.44.004281] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/03/2023]
Abstract
We present a fast and accurate method for real-time determination of the absorption coefficient, the scattering coefficient, and the anisotropy factor of thin turbid samples by using simple continuous-wave noncoherent light sources. The three optical properties are extracted from recordings of angularly resolved transmittance in addition to spatially resolved diffuse reflectance and transmittance. The applied multivariate calibration and prediction techniques are based on multiple polynomial regression in combination with a Newton--Raphson algorithm. The numerical test results based on Monte Carlo simulations showed mean prediction errors of approximately 0.5% for all three optical properties within ranges typical for biological media. Preliminary experimental results are also presented yielding errors of approximately 5%. Thus the presented methods show a substantial potential for simultaneous absorption and scattering characterization of turbid media.
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Affiliation(s)
- Jan S Dam
- Department of Physics, Lund Institute of Technology, P.O. Box 118, SE-22100 Lund, Sweden
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45
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Mohammed Y, Verhey JF. A finite element method model to simulate laser interstitial thermo therapy in anatomical inhomogeneous regions. Biomed Eng Online 2005; 4:2. [PMID: 15631630 PMCID: PMC546235 DOI: 10.1186/1475-925x-4-2] [Citation(s) in RCA: 41] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2004] [Accepted: 01/04/2005] [Indexed: 11/10/2022] Open
Abstract
BACKGROUND Laser Interstitial ThermoTherapy (LITT) is a well established surgical method. The use of LITT is so far limited to homogeneous tissues, e.g. the liver. One of the reasons is the limited capability of existing treatment planning models to calculate accurately the damage zone. The treatment planning in inhomogeneous tissues, especially of regions near main vessels, poses still a challenge. In order to extend the application of LITT to a wider range of anatomical regions new simulation methods are needed. The model described with this article enables efficient simulation for predicting damaged tissue as a basis for a future laser-surgical planning system. Previously we described the dependency of the model on geometry. With the presented paper including two video files we focus on the methodological, physical and mathematical background of the model. METHODS In contrast to previous simulation attempts, our model is based on finite element method (FEM). We propose the use of LITT, in sensitive areas such as the neck region to treat tumours in lymph node with dimensions of 0.5 cm - 2 cm in diameter near the carotid artery. Our model is based on calculations describing the light distribution using the diffusion approximation of the transport theory; the temperature rise using the bioheat equation, including the effect of microperfusion in tissue to determine the extent of thermal damage; and the dependency of thermal and optical properties on the temperature and the injury. Injury is estimated using a damage integral. To check our model we performed a first in vitro experiment on porcine muscle tissue. RESULTS We performed the derivation of the geometry from 3D ultrasound data and show for this proposed geometry the energy distribution, the heat elevation, and the damage zone. Further on, we perform a comparison with the in-vitro experiment. The calculation shows an error of 5% in the x-axis parallel to the blood vessel. CONCLUSIONS The FEM technique proposed can overcome limitations of other methods and enables an efficient simulation for predicting the damage zone induced using LITT. Our calculations show clearly that major vessels would not be damaged. The area/volume of the damaged zone calculated from both simulation and in-vitro experiment fits well and the deviation is small. One of the main reasons for the deviation is the lack of accurate values of the tissue optical properties. In further experiments this needs to be validated.
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Affiliation(s)
- Yassene Mohammed
- Department of Medical Informatics, University of Goettingen, Robert-Koch-Str. 40, D-37075-Goettingen, Germany
- Department of Sciences and Technology, University of Applied Sciences and Arts, von-Ossietzky-Str. 99, D-37085-Goettingen, Germany
| | - Janko F Verhey
- Department of Medical Informatics, University of Goettingen, Robert-Koch-Str. 40, D-37075-Goettingen, Germany
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Fawzi YS, Youssef ABM, el-Batanony MH, Kadah YM. Determination of the optical properties of a two-layer tissue model by detecting photons migrating at progressively increasing depths. Appl Opt 2003; 42:6398-411. [PMID: 14649284 DOI: 10.1364/ao.42.006398] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/12/2023]
Abstract
We have investigated a method for solving the inverse problem of determining the optical properties of a two-layer turbid model. The method is based on deducing the optical properties (OPs) of the top layer from the absolute spatially resolved reflectance that results from photon migration within only the top layer by use of a multivariate calibration model. Then the OPs of the bottom layer are deduced from relative frequency-domain (FD) reflectance measurements by use of the two-layer FD diffusion model. The method was validated with Monte Carlo FD reflectance profiles and experimental measurements of two-layer phantoms. The results showed that the method is useful for two-layer models with interface depths of >5 mm; the OPs were estimated, within a relatively short time (<1 min), with a mean error of <10% for the Monte Carlo reflectance profiles and with errors of <25% for the phantom measurements.
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Affiliation(s)
- Yasser S Fawzi
- Department of Laser Applications in Medicine, National Institute of Enhanced Laser Sciences, Cairo University, Cairo, Egypt.
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47
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Swartling J, Dam JS, Andersson-Engels S. Comparison of spatially and temporally resolved diffuse-reflectance measurement systems for determination of biomedical optical properties. Appl Opt 2003; 42:4612-4620. [PMID: 12916630 DOI: 10.1364/ao.42.004612] [Citation(s) in RCA: 39] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
Time-resolved and spatially resolved measurements of the diffuse reflectance from biological tissue are two well-established techniques for extracting the reduced scattering and absorption coefficients. We have performed a comparison study of the performance of a spatially resolved and a time-resolved instrument at wavelengths 660 and 786 nm and also of an integrating-sphere setup at 550-800 nm. The first system records the diffuse reflectance from a diode laser by means of a fiber bundle probe in contact with the sample. The time-resolved system utilizes picosecond laser pulses and a single-photon-counting detection scheme. We extracted the optical properties by calibration using known standards for the spatially resolved system, by fitting to the diffusion equation for the time-resolved system, and by using an inverse Monte Carlo model for the integrating sphere. The measurements were performed on a set of solid epoxy tissue phantoms. The results showed less than 10% difference in the evaluation of the reduced scattering coefficient among the systems for the phantoms in the range 9-20 cm(-1), and absolute differences of less than 0.05 cm(-1) for the absorption coefficient in the interval 0.05-0.30 cm(-1).
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Affiliation(s)
- Johannes Swartling
- Department of Physics, Lund Institute of Technology, P.O. Box 118, SE-22100 Lund, Sweden.
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48
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Pfefer TJ, Matchette LS, Bennett CL, Gall JA, Wilke JN, Durkin AJ, Ediger MN. Reflectance-based determination of optical properties in highly attenuating tissue. J Biomed Opt 2003; 8:206-15. [PMID: 12683846 DOI: 10.1117/1.1559487] [Citation(s) in RCA: 34] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/09/2002] [Revised: 10/15/2002] [Accepted: 11/11/2002] [Indexed: 05/20/2023]
Abstract
Accurate data on in vivo tissue optical properties in the ultraviolet A (UVA) to visible (VIS) range are needed to elucidate light propagation effects and to aid in identifying safe exposure limits for biomedical optical spectroscopy. We have performed a preliminary study toward the development of a diffuse reflectance system with maximum fiber separation distance of less than 2.5 mm. The ultimate objective is to perform endoscopic measurement of optical properties in the UVA to VIS. Optical property sets with uniformly and randomly distributed values were developed within the range of interest: absorption coefficients from 1 to 25 cm(-1) and reduced scattering coefficients from 5 to 25 cm(-1). Reflectance datasets were generated by direct measurement of Intralipid-dye tissue phantoms at lambda=675 nm and Monte Carlo simulation of light propagation. Multivariate calibration models were generated using feed-forward artificial neural network or partial least squares algorithms. Models were calibrated and evaluated using simulated or measured reflectance datasets. The most accurate models developed-those based on a neural network and uniform optical property intervals-were able to determine absorption and reduced scattering coefficients with root mean square errors of +/-2 and +/-3 cm(-1), respectively. Measurements of ex vivo bovine liver at 543 and 633 nm were within 5 to 30% of values reported in the literature. While our technique for determination of optical properties appears feasible and moderately accurate, enhanced accuracy may be achieved through modification of the experimental system and processing algorithms.
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Affiliation(s)
- T Joshua Pfefer
- US Food and Drug Administration, Center for Devices and Radiological Health, Rockville, Maryland 20857, USA.
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49
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Utzinger U, Richards-Kortum RR. Fiber optic probes for biomedical optical spectroscopy. J Biomed Opt 2003; 8:121-47. [PMID: 12542388 DOI: 10.1117/1.1528207] [Citation(s) in RCA: 146] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/26/2001] [Revised: 05/02/2002] [Accepted: 08/09/2002] [Indexed: 05/19/2023]
Abstract
Fiber optic probes are a key element for biomedical spectroscopic sensing. We review the use of fiber optic probes for optical spectroscopy, focusing on applications in turbid media, such as tissue. The design of probes for reflectance, polarized reflectance, fluorescence, and Raman spectroscopy is illustrated. We cover universal design principles as well as technologies for beam deflecting and reshaping.
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Affiliation(s)
- Urs Utzinger
- University of Arizona, Biomedical Engineering and Obstetrics & Gynecology, Tucson, Arizona 85724, USA.
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50
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Larsson M, Nilsson H, Strömberg T. In vivo determination of local skin optical properties and photon path length by use of spatially resolved diffuse reflectance with applications in laser Doppler flowmetry. Appl Opt 2003; 42:124-134. [PMID: 12518831 DOI: 10.1364/ao.42.000124] [Citation(s) in RCA: 19] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
Methods for local photon path length and optical properties estimation, based on measured and simulated diffuse reflectance within 2 mm from the light source, are proposed and evaluated in vivo on Caucasian human skin. The accuracy of the methods was good (2%-7%) for path length and reduced scattering but poor for absorption estimation. Reduced scattering and absorption were systematically lower in the fingertip than in the forearm skin (633 nm). A maximum intrasite and interindividual variation of approximately 35% in an average photon path length was found. The methodology was applied in laser Doppler flowmetry, where path-length normalization of the estimated perfusion removed the optical property dependency.
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Affiliation(s)
- Marcus Larsson
- Department of Biomedical Engineering, Linköpings Universitet, University Hospital, S-581 85 Linköping, Sweden.
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