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Resetarits HM, Dishon G, Agarwal V, Smith JE. The effects of temperature and CO 2 enrichment on the red seaweed Asparagopsis taxiformis from Southern California with implications for aquaculture. JOURNAL OF PHYCOLOGY 2024; 60:1567-1584. [PMID: 39616619 DOI: 10.1111/jpy.13526] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/05/2024] [Revised: 09/06/2024] [Accepted: 10/13/2024] [Indexed: 12/28/2024]
Abstract
The red alga Asparagopsis taxiformis has recently been recognized for its unique ability to significantly reduce methane emissions from ruminant animals when fed in small quantities. The main obstacle in using this seaweed as a methane-mitigating feed supplement is the lack of commercially available biomass. Little is known about how best to grow this red alga on a commercial scale, as there are few published studies that have investigated the factors that influence growth, physiology, and overall performance. This study examined the effects of temperature and CO2 enrichment on the growth, photophysiology, and concentration of bromoform, the secondary metabolite largely responsible for methane reduction in A. taxiformis. A series of single and multifactor closed culture experiments were conducted on A. taxiformis collected, isolated, and cultured from populations in Southern California. We identified the optimal temperature range to be between 22 and 26°C, with significant short-term stress observed below 15°C and above 26°C. Carbon dioxide addition resulted in increased performance, when accounting for growth per CO2 use. In general, we observed the highest bromoform concentrations in algae with the highest growth rates, but these results varied among experiments. These findings indicate that through environmental control and by addressing limiting resources, significant increases in biomass production and quality can be achieved.
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Affiliation(s)
- Hannah M Resetarits
- Scripps Institution of Oceanography, University of California San Diego, La Jolla, California, USA
| | - Gal Dishon
- Scripps Institution of Oceanography, University of California San Diego, La Jolla, California, USA
| | - Vinayak Agarwal
- School of Chemistry and Biochemistry, School of Biological Sciences, Georgia Institute of Technology, Atlanta, Georgia, USA
| | - Jennifer E Smith
- Scripps Institution of Oceanography, University of California San Diego, La Jolla, California, USA
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2
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Vieira C, Kim MS, N’Yeurt ADR, Payri C, D’Hondt S, De Clerck O, Zubia M. Marine Flora of French Polynesia: An Updated List Using DNA Barcoding and Traditional Approaches. BIOLOGY 2023; 12:1124. [PMID: 37627008 PMCID: PMC10452401 DOI: 10.3390/biology12081124] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/26/2023] [Revised: 08/01/2023] [Accepted: 08/04/2023] [Indexed: 08/27/2023]
Abstract
Located in the heart of the South Pacific Ocean, the French Polynesian islands represent a remarkable setting for biological colonization and diversification, because of their isolation. Our knowledge of this region's biodiversity is nevertheless still incomplete for many groups of organisms. In the late 1990s and 2000s, a series of publications provided the first checklists of French Polynesian marine algae, including the Chlorophyta, Rhodophyta, Ochrophyta, and Cyanobacteria, established mostly on traditional morphology-based taxonomy. We initiated a project to systematically DNA barcode the marine flora of French Polynesia. Based on a large collection of ~2452 specimens, made between 2014 and 2023, across the five French Polynesian archipelagos, we re-assessed the marine floral species diversity (Alismatales, Cyanobacteria, Rhodophyta, Ochrophyta, Chlorophyta) using DNA barcoding in concert with morphology-based classification. We provide here a major revision of French Polynesian marine flora, with an updated listing of 702 species including 119 Chlorophyta, 169 Cyanobacteria, 92 Ochrophyta, 320 Rhodophyta, and 2 seagrass species-nearly a two-fold increase from previous estimates. This study significantly improves our knowledge of French Polynesian marine diversity and provides a valuable DNA barcode reference library for identification purposes and future taxonomic and conservation studies. A significant part of the diversity uncovered from French Polynesia corresponds to unidentified lineages, which will require careful future taxonomic investigation.
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Affiliation(s)
- Christophe Vieira
- Department of Biology and Research Institute for Basic Sciences, Jeju National University, Jeju 63243, Republic of Korea;
- Phycology Research Group, Center for Molecular Phylogenetics and Evolution, Ghent University, 9000 Ghent, Belgium
| | - Myung Sook Kim
- Department of Biology and Research Institute for Basic Sciences, Jeju National University, Jeju 63243, Republic of Korea;
| | - Antoine De Ramon N’Yeurt
- Pacific Center for Environment an Sustainable Development, The University of the South Pacific, Private Mail Bag, Suva P.O. Box 1168, Fiji;
| | - Claude Payri
- Institut de Recherche pour le Développement, Nouméa 98848, New Caledonia
| | - Sofie D’Hondt
- Phycology Research Group, Center for Molecular Phylogenetics and Evolution, Ghent University, 9000 Ghent, Belgium
| | - Olivier De Clerck
- Phycology Research Group, Center for Molecular Phylogenetics and Evolution, Ghent University, 9000 Ghent, Belgium
| | - Mayalen Zubia
- UMR Ecosystèmes Insulaires Océaniens, University of French Polynesia, BP6570, Faa’a 98702, Tahiti, French Polynesia
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Inventory of the Seaweeds and Seagrasses of the Hawaiian Islands. BIOLOGY 2023; 12:biology12020215. [PMID: 36829491 PMCID: PMC9953416 DOI: 10.3390/biology12020215] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/04/2023] [Revised: 01/24/2023] [Accepted: 01/28/2023] [Indexed: 01/31/2023]
Abstract
This updated list is composed of a total of 661 records, which includes 71 brown algae, 450 red algae, 137 green algae, and three seagrasses, with an overall rate of endemism of 13.2%. Almost half (46.7%) of the Hawaiian records presented here are represented by at least one DNA sequence, while 16.3% are confirmed through a DNA sequence match to a topotype, and 6.7% are confirmed through a DNA sequence match to a type specimen. The data are presented in the context of the natural history of the Hawaiian Islands, which is heavily influenced by the volcanic hotspot origin of the archipelago in the middle of the Pacific Ocean, as well as the important cultural role of seaweeds and other marine plants in Hawai'i, and the current threats to marine ecosystems, which include the introduction and proliferation of a number of invasive marine macroalgae.
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Zhu P, Li D, Yang Q, Su P, Wang H, Heimann K, Zhang W. Commercial cultivation, industrial application, and potential halocarbon biosynthesis pathway of Asparagopsis sp. ALGAL RES 2021. [DOI: 10.1016/j.algal.2021.102319] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
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Vieira HC, Rodrigues ACM, Pires SFS, Oliveira JMM, Rocha RJM, Soares AMVM, Bordalo MD. Ocean Warming May Enhance Biochemical Alterations Induced by an Invasive Seaweed Exudate in the Mussel Mytilus galloprovincialis. TOXICS 2021; 9:121. [PMID: 34071183 PMCID: PMC8229087 DOI: 10.3390/toxics9060121] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/14/2021] [Revised: 05/26/2021] [Accepted: 05/27/2021] [Indexed: 11/16/2022]
Abstract
Ocean warming and biological invasions are among the most pervasive factors threatening coastal ecosystems with a potential to interact. Ongoing temperature rise may affect physiological and cellular mechanisms in marine organisms. Moreover, non-indigenous species spread has been a major challenge to biodiversity and ecosystem functions and services. The invasive red seaweed Asparagopsis armata has become successfully established in Europe. Its exudate has been considered deleterious to surrounding native species, but no information exists on its effect under forecasted temperature increase. This study evaluated the combined effects of temperature rise and A. armata exudate exposure on the native mussel Mytilus galloprovincialis. Oxidative stress, neurophysiological and metabolism related biomarkers were evaluated after a 96 h-exposure to exudate (0% and 2%) under present (20 °C) and warming (24 °C) temperature scenarios. Short-term exposure to A. armata exudate affected the oxidative stress status and neurophysiology of the mussels, with a tendency to an increasing toxic action under warming. Significant oxidative damage at protein level was observed in the digestive gland and muscle of individuals exposed simultaneously to the exudate and temperature rise. Thus, under a climate change scenario, it may be expected that prolonged exposure to the combined action of both stressors may compromise M. galloprovincialis fitness and survival.
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Affiliation(s)
- Hugo C. Vieira
- CESAM—Centre for Environmental and Marine Studies, Department of Biology, University of Aveiro, 3810-193 Aveiro, Portugal; (A.C.M.R.); (S.F.S.P.); (J.M.M.O.); (R.J.M.R.); (A.M.V.M.S.); (M.D.B.)
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Macroalgae niche modelling: a two-step approach using remote sensing and in situ observations of a native and an invasive Asparagopsis. Biol Invasions 2021. [DOI: 10.1007/s10530-021-02554-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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7
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Modelling the Distribution of the Red Macroalgae Asparagopsis to Support Sustainable Aquaculture Development. AGRIENGINEERING 2021. [DOI: 10.3390/agriengineering3020017] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Fermentative digestion by ruminant livestock is one of the main ways enteric methane enters the atmosphere, although recent studies have identified that including red macroalgae as a feed ingredient can drastically reduce methane produced by cattle. Here, we utilize ecological modelling to identify suitable sites for establishing aquaculture development to support sustainable agriculture and Sustainable Development Goals 1 and 2. We used species distributions models (SDMs) parameterized using an ensemble of multiple statistical and machine learning methods, accounting for novel methodological and ecological artefacts that arise from using such approaches on non-native and cultivated species. We predicted the current distribution of two Asparagopsis species to high accuracy around the coast of Ireland. The environmental drivers of each species differed depending on where the response data was sourced from (i.e., native vs. non-native), suggesting that the length of time A. armata has been present in Ireland may mean it has undergone a niche shift. Subsequently, researchers looking to adopt SDMs to support aquaculture development need to acknowledge emerging conceptual issues, and here we provide the code needed to implement such research, which should support efforts to effectively choose suitable sites for aquaculture development that account for the unique methodological steps identified in this research.
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How Does Mytilus galloprovincialis Respond When Exposed to the Gametophyte Phase of the Invasive Red Macroalga Asparagopsis armata Exudate? WATER 2021. [DOI: 10.3390/w13040460] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
Asparagopsis armata is classified as an invasive species in Europe. Through the exudation of secondary metabolites, this macroalga holds a chemical defence against consumers, with potential toxic effects to native rocky shore communities. This study aims to evaluate the potential impact of A. armata (gametophyte) exudate in a native species, the mussel Mytilus galloprovincialis, in terms of biochemical and organismal effects. The 96 h-LC50 was 3.667% and based on it, exudate concentrations (0.25; 0.5; 1; 2%) were determined to further sublethal experiments. These sublethal concentrations caused no oxidative damage in the digestive gland since lipid peroxidation and protein carbonylation were not affected. Nevertheless, there was a significant rise in the electron transport system activity and total glutathione content in muscle, suggesting an increased non-enzymatic antioxidant capacity and consequent energy consumption to cope with potential pro-oxidant compounds. This might have contributed to the observed decline in cellular energy allocation of the exposed mussels. At the organismal level, clearance capacity declined along the concentration gradient. Moreover, the number of functional byssuses decreased with increasing concentrations and a significant reduction in their attachment strength was observed. These findings suggest that the presence of A. armata may compromise M. galloprovincialis integrity in the invaded coastal areas.
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Thapa HR, Lin Z, Yi D, Smith JE, Schmidt EW, Agarwal V. Genetic and Biochemical Reconstitution of Bromoform Biosynthesis in Asparagopsis Lends Insights into Seaweed Reactive Oxygen Species Enzymology. ACS Chem Biol 2020; 15:1662-1670. [PMID: 32453942 DOI: 10.1021/acschembio.0c00299] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
Marine macroalgae, seaweeds, are exceptionally prolific producers of halogenated natural products. Biosynthesis of halogenated molecules in seaweeds is inextricably linked to reactive oxygen species (ROS) signaling as hydrogen peroxide serves as a substrate for haloperoxidase enzymes that participate in the construction these halogenated molecules. Here, using red macroalga Asparagopsis taxiformis, a prolific producer of the ozone depleting molecule bromoform, we provide the discovery and biochemical characterization of a ROS-producing NAD(P)H oxidase from seaweeds. This discovery was enabled by our sequencing of Asparagopsis genomes, in which we find the gene encoding the ROS-producing enzyme to be clustered with genes encoding bromoform-producing haloperoxidases. Biochemical reconstitution of haloperoxidase activities establishes that fatty acid biosynthesis can provide viable hydrocarbon substrates for bromoform production. The ROS production haloperoxidase enzymology that we describe here advances seaweed biology and biochemistry by providing the molecular basis for decades worth of physiological observations in ROS and halogenated natural product biosyntheses.
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Affiliation(s)
- Hem R. Thapa
- School of Chemistry and Biochemistry, Georgia Institute of Technology, Atlanta, Georgia 30332, United States
| | - Zhenjian Lin
- Department of Medicinal Chemistry, University of Utah, Salt Lake City, Utah 84112, United States
| | - Dongqi Yi
- School of Chemistry and Biochemistry, Georgia Institute of Technology, Atlanta, Georgia 30332, United States
| | - Jennifer E. Smith
- Center for Marine Biodiversity and Conservation, Scripps Institution of Oceanography, University of California, San Diego, La Jolla, California 92093, United States
| | - Eric W. Schmidt
- Department of Medicinal Chemistry, University of Utah, Salt Lake City, Utah 84112, United States
| | - Vinayak Agarwal
- School of Chemistry and Biochemistry, Georgia Institute of Technology, Atlanta, Georgia 30332, United States
- School of Biological Sciences, Georgia Institute of Technology, Atlanta, Georgia 30332, United States
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Cacabelos E, Martins GM, Faria J, Prestes ACL, Costa T, Moreu I, Neto AI. Limited effects of marine protected areas on the distribution of invasive species, despite positive effects on diversity in shallow-water marine communities. Biol Invasions 2019. [DOI: 10.1007/s10530-019-02171-x] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
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11
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Boo GH, Qiu YX, Kim JY, Ang PO, Bosch S, De Clerck O, He P, Higa A, Huang B, Kogame K, Liu SL, van Nguyen T, Suda S, Terada R, Miller KA, Boo SM. Contrasting patterns of genetic structure and phylogeography in the marine agarophytes Gelidiophycus divaricatus and G. freshwateri (Gelidiales, Rhodophyta) from East Asia. JOURNAL OF PHYCOLOGY 2019; 55:1319-1334. [PMID: 31390066 DOI: 10.1111/jpy.12910] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/01/2018] [Accepted: 07/19/2019] [Indexed: 06/10/2023]
Abstract
The evolutionary and population demographic history of marine red algae in East Asia is poorly understood. Here, we reconstructed the phylogeographies of two upper intertidal species endemic to East Asia, Gelidiophycus divaricatus and G. freshwateri. Phylogenetic and phylogeographic inferences of 393 mitochondrial cox1, 128 plastid rbcL, and 342 nuclear ITS2 sequences were complemented with ecological niche models. Gelidiophycus divaricatus, a southern species adapted to warm water, is characterized by a high genetic diversity and a strong geographical population structure, characteristic of stable population sizes and sudden reduction to recent expansion. In contrast, G. freshwateri, a northern species adapted to cold temperate conditions, is genetically relatively homogeneous with a shallow population structure resulting from steady population growth and recent equilibrium. The overlap zone of the two species roughly matches summer and winter isotherms, indicating that surface seawater temperature is a key feature influencing species range. Unidirectional genetic introgression was detected at two sites on Jeju Island where G. divaricatus was rare while G. freshwateri was common, suggesting the occurrence of asymmetric natural hybrids, a rarely reported event for rhodophytes. Our results illustrate that Quaternary climate oscillations have left strong imprints on the current day genetic structure and highlight the importance of seawater temperature and sea level change in driving speciation in upper intertidal seaweed species.
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Affiliation(s)
- Ga Hun Boo
- University Herbarium, University of California, 1001 Valley Life Sciences Building #2465, Berkeley, California, 94720, USA
- Department of Biology, Chungnam National University, Daejeon, 34134, Korea
| | - Ying-Xiong Qiu
- Key Laboratory of Conservation Biology for Endangered Wildlife of the Ministry of Education, and College of Life Sciences, Zhejiang University, Hangzhou, 310058, China
| | - Jung Yeon Kim
- Department of Biology, Chungnam National University, Daejeon, 34134, Korea
| | - Put O Ang
- Marine Science Laboratory, The Chinese University of Hong Kong, Shatin N.T, Hong Kong SAR, China
| | - Samuel Bosch
- Phycology Research Group and Center for Molecular Phylogenetics and Evolution, Ghent University, Krijgslaan 281 (S8), 9000, Gent, Belgium
| | - Olivier De Clerck
- Phycology Research Group and Center for Molecular Phylogenetics and Evolution, Ghent University, Krijgslaan 281 (S8), 9000, Gent, Belgium
| | - Peimin He
- College of Fisheries and Life Science, Shanghai Ocean University, Shanghai, 201306, China
| | - Atsushi Higa
- Okinawa Environmental Analysis Center Co. Ltd, 3-7-24 Maehara, Ginowan, Okinawa, 901-2215, Japan
| | - Bangqin Huang
- Key Laboratory of Coastal Ecology and Environmental Studies, Xiamen University, Fujian, China
| | - Kazuhiro Kogame
- Department of Natural History Sciences, Faculty of Science, Hokkaido University, Sapporo, 060-0810, Japan
| | - Shao-Lun Liu
- Department of Life Science, Tunghai University, Taichung, 40704, Taiwan
| | - Tu van Nguyen
- Department of Ecology, Institute of Tropical Biology, Vietnam Academy of Science and Technology, 85 Tran Quoc Toan, District 3, Ho Chi Minh City, Vietnam
| | - Shoichiro Suda
- Department of Chemistry, Biology & Marine Science, Faculty of Science, University of the Ryukyus, Okinawa, 903-0213, Japan
| | - Ryuta Terada
- United Graduate School of Agricultural Sciences, Kagoshima University, Korimoto 1-21-24, Kagoshima, 890-0065, Japan
| | - Kathy Ann Miller
- University Herbarium, University of California, 1001 Valley Life Sciences Building #2465, Berkeley, California, 94720, USA
| | - Sung Min Boo
- Department of Biology, Chungnam National University, Daejeon, 34134, Korea
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Navarro-Barranco C, Florido M, Ros M, González-Romero P, Guerra-García JM. Impoverished mobile epifaunal assemblages associated with the invasive macroalga Asparagopsis taxiformis in the Mediterranean Sea. MARINE ENVIRONMENTAL RESEARCH 2018; 141:44-52. [PMID: 30093236 DOI: 10.1016/j.marenvres.2018.07.016] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/17/2018] [Revised: 07/24/2018] [Accepted: 07/25/2018] [Indexed: 06/08/2023]
Abstract
There is an increasing concern about the ecosystem consequences of altering macroalgal assemblages. Many macrophytes are foundation species in coastal habitats, supporting much of the biodiversity of these ecosystems by providing essential resources such as food and habitat. The addition of invasive species strongly contributes to habitat modification, but the bottom-up impacts of non-native macroalgae on higher trophic levels remains difficult to predict. The main aim of this study was to evaluate the effects of the invasive macroalga Asparagopsis taxiformis on biodiversity by comparing the mobile macrofauna inhabiting this species to the dominant native species Halopteris scoparia. This is the first comprehensive study of the possible effects of this widespread invasive species on higher trophic levels. A hierarchical sampling design with two different spatial scales was conducted to explore the consistency of the patterns observed. Fifty-nine species belonging to superorder Peracarida were found, accounting 90% of all organisms. A. taxiformis hosted an impoverished epifaunal assemblage in comparison to that associated with the native seaweed, showing significantly lower values of diversity, abundance and number of epifaunal species across study locations. The structure of the associated macrofauna (both in terms of species composition, variability among samples and relative abundance of the species) was also different. Our results highlighted the strong influence of A. taxiformis in the resident community, with differences among the two macroalgae in all the parameters considered. Finally, our results also reflect a biotic homogenization of the epifaunal assemblages associated to A. taxiformis, a scarcely explored consequence of invasive processes in marine environments. Future studies exploring the cascading effects of the observed changes in the epifaunal assemblages would be necessary in order to estimate system responses to macroalgal invasions.
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Affiliation(s)
- Carlos Navarro-Barranco
- Departamento de Biología (Zoología), Campus de Cantoblanco, Universidad Autónoma de Madrid, 28049, Madrid, Spain; Laboratorio de Biología Marina, Dpto. Zoología, Facultad de Biología, Universidad de Sevilla, Avda Reina Mercedes 6, 41012, Sevilla, Spain.
| | - Marta Florido
- Laboratorio de Biología Marina, Dpto. Zoología, Facultad de Biología, Universidad de Sevilla, Avda Reina Mercedes 6, 41012, Sevilla, Spain
| | - Macarena Ros
- Laboratorio de Biología Marina, Dpto. Zoología, Facultad de Biología, Universidad de Sevilla, Avda Reina Mercedes 6, 41012, Sevilla, Spain; Departamento de Biología, CASEM, Facultad de Ciencias del Mar y Ambientales, Campus Universitario de Puerto Real, 11510, Puerto Real, Cádiz, Spain
| | - Pablo González-Romero
- Laboratorio de Biología Marina, Dpto. Zoología, Facultad de Biología, Universidad de Sevilla, Avda Reina Mercedes 6, 41012, Sevilla, Spain
| | - José Manuel Guerra-García
- Laboratorio de Biología Marina, Dpto. Zoología, Facultad de Biología, Universidad de Sevilla, Avda Reina Mercedes 6, 41012, Sevilla, Spain
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Máximo P, Ferreira LM, Branco P, Lima P, Lourenço A. Secondary Metabolites and Biological Activity of Invasive Macroalgae of Southern Europe. Mar Drugs 2018; 16:md16080265. [PMID: 30072602 PMCID: PMC6117733 DOI: 10.3390/md16080265] [Citation(s) in RCA: 30] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2018] [Revised: 07/29/2018] [Accepted: 07/31/2018] [Indexed: 02/06/2023] Open
Abstract
In this review a brief description of the invasive phenomena associated with algae and its consequences on the ecosystem are presented. Three examples of invasive algae of Southern Europe, belonging to Rodophyta, Chlorophyta, and Phaeophyta, were selected, and a brief description of each genus is presented. A full description of their secondary metabolites and biological activity is given and a summary of the biological activity of extracts is also included. In Asparagopsis we encounter mainly halogenated compounds. From Caulerpa, several terpenoids and alkaloids were isolated, while in Sargassum, meroterpenoids prevail.
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Affiliation(s)
- Patrícia Máximo
- LAQV-REQUIMTE, Departamento de Química, Faculdade de Ciências e Tecnologia, Universidade NOVA de Lisboa, 2829-516 Caparica, Portugal.
| | - Luísa M Ferreira
- LAQV-REQUIMTE, Departamento de Química, Faculdade de Ciências e Tecnologia, Universidade NOVA de Lisboa, 2829-516 Caparica, Portugal.
| | - Paula Branco
- LAQV-REQUIMTE, Departamento de Química, Faculdade de Ciências e Tecnologia, Universidade NOVA de Lisboa, 2829-516 Caparica, Portugal.
| | - Pedro Lima
- Sea4Us-Biotecnologia de Recursos Marinhos, Ltd., 8650-378 Sagres, Portugal.
- Nova Medical School/Faculdade de Ciências Médicas, Universidade Nova de Lisboa, Campo Mártires da Pátria, 1169-056 Lisboa, Portugal.
| | - Ana Lourenço
- LAQV-REQUIMTE, Departamento de Química, Faculdade de Ciências e Tecnologia, Universidade NOVA de Lisboa, 2829-516 Caparica, Portugal.
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Zanolla M, Altamirano M, Carmona R, De la Rosa J, Souza-Egipsy V, Sherwood A, Tsiamis K, Barbosa AM, Muñoz AR, Andreakis N. Assessing global range expansion in a cryptic species complex: insights from the red seaweed genus Asparagopsis (Florideophyceae). JOURNAL OF PHYCOLOGY 2018; 54:12-24. [PMID: 29054117 DOI: 10.1111/jpy.12598] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/27/2017] [Accepted: 09/13/2017] [Indexed: 06/07/2023]
Abstract
The mitochondrial genetic diversity, distribution and invasive potential of multiple cryptic operational taxonomic units (OTUs) of the red invasive seaweed Asparagopsis were assessed by studying introduced Mediterranean and Hawaiian populations. Invasive behavior of each Asparagopsis OTU was inferred from phylogeographic reconstructions, past historical demographic dynamics, recent range expansion assessments and future distributional predictions obtained from demographic models. Genealogical networks resolved Asparagopsis gametophytes and tetrasporophytes into four A. taxiformis and one A. armata cryptic OTUs. Falkenbergia isolates of A. taxiformis L3 were recovered for the first time in the western Mediterranean Sea and represent a new introduction for this area. Neutrality statistics supported past range expansion for A. taxiformis L1 and L2 in Hawaii. On the other hand, extreme geographic expansion and an increase in effective population size were found only for A. taxiformis L2 in the western Mediterranean Sea. Distribution models predicted shifts of the climatically suitable areas and population expansion for A. armata L1 and A. taxiformis L1 and L2. Our integrated study confirms a high invasive risk for A. taxiformis L1 and L2 in temperate and tropical areas. Despite the differences in predictions among modelling approaches, a number of regions were identified as zones with high invasion risk for A. taxiformis L2. Since range shifts are likely climate-driven phenomena, future invasive behavior cannot be excluded for the rest of the lineages.
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Affiliation(s)
- Marianela Zanolla
- Departamento de Biología Vegetal (Botánica), Universidad de Málaga, Campus de Teatinos s/n, 29071, Málaga, Spain
| | - María Altamirano
- Departamento de Biología Vegetal (Botánica), Universidad de Málaga, Campus de Teatinos s/n, 29071, Málaga, Spain
| | - Raquel Carmona
- Departamento de Ecología y Geología, Universidad de Málaga, Campus de Teatinos s/n, 29071, Málaga, Spain
| | - Julio De la Rosa
- Department of Botany, University of Granada, Campus Fuentenueva s/n, 18171, Granada, Spain
| | - Virginia Souza-Egipsy
- Departamento de Biología Vegetal (Botánica), Universidad de Málaga, Campus de Teatinos s/n, 29071, Málaga, Spain
| | - Alison Sherwood
- Department of Botany, University of Hawaii, Honolulu, Hawaii, 96822, USA
| | - Konstantinos Tsiamis
- Hellenic Centre for Marine Research, Institute of Oceanography, Anavyssos, 19013, Attica, Greece
| | - Ana Márcia Barbosa
- Centro de Investigação em Biodiversidade e Recursos Genéticos (CIBIO), InBIO Research Network in Biodiversity and Evolutionary Biology, University of Évora, 7004-516, Évora, Portugal
| | - Antonio Román Muñoz
- Departamento de Botànica, Facultad de Farmacia, Universidad de Valencia, Avda. Vicente Andrés Estellés s/n, Burjassot, Valencia, Spain
- Biogeography, Diversity, and Conservation Research Team, Department of Animal Biology, Faculty of Sciences, University of Malaga, E-29071, Malaga, Spain
| | - Nikos Andreakis
- College of Science and Engineering, James Cook University and Australian Institute of Marine Science, PMB 3, Townsville, Queensland, 4810, Australia
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15
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Worldwide sampling reveals low genetic variability in populations of the freshwater ciliate Paramecium biaurelia (P. aurelia species complex, Ciliophora, Protozoa). ORG DIVERS EVOL 2018. [DOI: 10.1007/s13127-017-0357-z] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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16
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Darling JA, Carlton JT. A Framework for Understanding Marine Cosmopolitanism in the Anthropocene. FRONTIERS IN MARINE SCIENCE 2018; 5:293. [PMID: 31019910 PMCID: PMC6475922 DOI: 10.3389/fmars.2018.00293] [Citation(s) in RCA: 36] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/03/2023]
Abstract
Recent years have witnessed growing appreciation for the ways in which human-mediated species introductions have reshaped marine biogeography. Despite this we have yet to grapple fully with the scale and impact of anthropogenic dispersal in both creating and determining contemporary distributions of marine taxa. In particular, the past several decades of research on marine biological invasions have revealed that broad geographic distributions of coastal marine organisms-historically referred to simply as "cosmopolitanism"-may belie complex interplay of both natural and anthropogenic processes. Here we describe a framework for understanding contemporary cosmopolitanism, informed by a synthesis of the marine bioinvasion literature. Our framework defines several novel categories in an attempt to provide a unified terminology for discussing cosmopolitan distributions in the world's oceans. We reserve the term eucosmopolitan to refer to those species for which data exist to support a true, natural, and prehistorically global (or extremely broad) distribution. While in the past this has been the default assumption for species observed to exhibit contemporary cosmopolitan distributions, we argue that given recent advances in marine invasion science this assignment should require positive evidence. In contrast, neocosmopolitan describes those species that have demonstrably achieved extensive geographic ranges only through historical anthropogenic dispersal, often facilitated over centuries of human maritime traffic. We discuss the history and human geography underpinning these neocosmopolitan distributions, and illustrate the extent to which these factors may have altered natural biogeographic patterns. We define the category pseudocosmopolitan to encompass taxa for which a broad distribution is determined (typically after molecular investigation) to reflect multiple, sometimes regionally endemic, lineages with uncertain taxonomic status; such species may remain cosmopolitan only so long as taxonomic uncertainty persists, after which they may splinter into multiple geographically restricted species. We discuss the methods employed to identify such species and to resolve both their taxonomic status and their biogeographic histories. We argue that recognizing these different types of cosmopolitanism, and the important role that invasion science has played in understanding them, is critically important for the future study of both historical and modern marine biogeography, ecology, and biodiversity.
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Affiliation(s)
- John A. Darling
- United States Environmental Protection Agency, National Exposure Research Laboratory, Research Triangle Park, NC, United States
| | - James T. Carlton
- Maritime Studies Program, Williams College-Mystic Seaport, Mystic, CT, United States
- Department of Biology, Williams College, Williamstown, MA, United States
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17
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El Ayari T, Trigui El Menif N, Saavedra C, Cordero D, Viard F, Bierne N. Unexpected mosaic distribution of two hybridizing sibling lineages in the teleplanically dispersing snail Stramonita haemastoma suggests unusual postglacial redistribution or cryptic invasion. Ecol Evol 2017; 7:9016-9026. [PMID: 29177037 PMCID: PMC5689492 DOI: 10.1002/ece3.3418] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/02/2017] [Revised: 08/04/2017] [Accepted: 08/11/2017] [Indexed: 01/29/2023] Open
Abstract
Molecular approaches have proven efficient to identify cryptic lineages within single taxonomic entities. Sometimes these cryptic lineages maybe previously unreported or unknown invasive taxa. The genetic structure of the marine gastropod Stramonita haemastoma has been examined in the Western Mediterranean and North‐Eastern Atlantic populations with mtDNA COI sequences and three newly developed microsatellite markers. We identified two cryptic lineages, differentially fixed for alternative mtDNA COI haplogroups and significantly differentiated at microsatellite loci. The mosaic distribution of the two lineages is unusual for a warm‐temperate marine invertebrate with a teleplanic larval stage. The Atlantic lineage was unexpectedly observed as a patch enclosed in the north of the Western Mediterranean Sea between eastern Spain and the French Riviera, and the Mediterranean lineage was found in Macronesian Islands. Although cyto‐nuclear disequilibrium is globally maintained, asymmetric introgression occurs in the Spanish region where the two lineages co‐occur in a hybrid zone. A first interpretation of our results is mito‐nuclear discordance in a stable postglacial hybrid zone. Under this hypothesis, though, the location of genetic discontinuities would be unusual among planktonic dispersers. An alternative interpretation is that the Atlantic lineage, also found in Senegal and Venezuela, has been introduced by human activities in the Mediterranean area and is introgressing Mediterranean genes during its propagation, as theoretically expected. This second hypothesis would add an additional example to the growing list of cryptic marine invasions revealed by molecular studies.
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Affiliation(s)
- Tahani El Ayari
- Université de Montpellier Montpellier Cedex 5 France.,ISEM - CNRS UMR 5554 Station Marine OREME Sète France.,Laboratory of Environment Bio-monitoring Faculty of Sciences of Bizerta University of Carthage Bizerta Tunisia
| | - Najoua Trigui El Menif
- Laboratory of Environment Bio-monitoring Faculty of Sciences of Bizerta University of Carthage Bizerta Tunisia
| | - Carlos Saavedra
- Instituto de Acuicultura Torre de la Sal Consejo Superior de Investigaciones Cientίficas Ribera de Cabanes (Castellόn) Spain
| | - David Cordero
- Instituto de Acuicultura Torre de la Sal Consejo Superior de Investigaciones Cientίficas Ribera de Cabanes (Castellόn) Spain
| | - Frédérique Viard
- UPMC Université Paris 6CNRS UMR 7144 Adaptation et Diversité en Milieu Marin Equipe DIVCO Station Biologique de Roscoff Sorbonne Université Roscoff France
| | - Nicolas Bierne
- Université de Montpellier Montpellier Cedex 5 France.,ISEM - CNRS UMR 5554 Station Marine OREME Sète France
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18
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Molecular Assisted Identification Reveals Hidden Red Algae Diversity from the Burica Peninsula, Pacific Panama. DIVERSITY-BASEL 2017. [DOI: 10.3390/d9020019] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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19
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Greff S, Aires T, Serrão EA, Engelen AH, Thomas OP, Pérez T. The interaction between the proliferating macroalga Asparagopsis taxiformis and the coral Astroides calycularis induces changes in microbiome and metabolomic fingerprints. Sci Rep 2017; 7:42625. [PMID: 28218290 PMCID: PMC5317032 DOI: 10.1038/srep42625] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2016] [Accepted: 01/13/2017] [Indexed: 12/12/2022] Open
Abstract
Mediterranean Sea ecosystems are considered as hotspots of biological introductions, exposed to possible negative effects of non–indigenous species. In such temperate marine ecosystems, macroalgae may be dominant, with a great percentage of their diversity represented by introduced species. Their interaction with temperate indigenous benthic organisms have been poorly investigated. To provide new insights, we performed an experimental study on the interaction between the introduced proliferative red alga Asparagopsis taxiformis and the indigenous Mediterranean coral Astroides calycularis. The biological response measurements included meta–barcoding of the associated microbial communities and metabolomic fingerprinting of both species. Significant changes were detected among both associated microbial communities, the interspecific differences decreasing with stronger host interaction. No short term effects of the macroalga on the coral health, neither on its polyp activity or its metabolism, were detected. In contrast, the contact interaction with the coral induced a change in the macroalgal metabolomic fingerprint with a significant increase of its bioactivity against the marine bacteria Aliivibrio fischeri. This induction was related to the expression of bioactive metabolites located on the macroalgal surface, a phenomenon which might represent an immediate defensive response of the macroalga or an allelopathic offense against coral.
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Affiliation(s)
- Stéphane Greff
- Institut Méditerranéen de Biodiversité et d'Ecologie marine et continentale, IMBE UMR 7263 CNRS/IRD/Aix Marseille Université/Avignon Université. Station Marine d'Endoume, rue de la Batterie des Lions, 13007 Marseille, France
| | - Tânia Aires
- CCMAR-CIMAR Centre for Marine Sciences, University of Algarve, Campus de Gambelas, 8005-139 Faro, Portugal
| | - Ester A Serrão
- CCMAR-CIMAR Centre for Marine Sciences, University of Algarve, Campus de Gambelas, 8005-139 Faro, Portugal
| | - Aschwin H Engelen
- CCMAR-CIMAR Centre for Marine Sciences, University of Algarve, Campus de Gambelas, 8005-139 Faro, Portugal
| | - Olivier P Thomas
- Institut Méditerranéen de Biodiversité et d'Ecologie marine et continentale, IMBE UMR 7263 CNRS/IRD/Aix Marseille Université/Avignon Université. Station Marine d'Endoume, rue de la Batterie des Lions, 13007 Marseille, France.,GEOAZUR, UMR 7329 CNRS/Université de Nice Sophia Antipolis, Faculté des Sciences, Parc Valrose 06108, Nice, France.,Marine Biodiscovery, School of Chemistry, National University of Ireland Galway, University Road, Galway, Ireland
| | - Thierry Pérez
- Institut Méditerranéen de Biodiversité et d'Ecologie marine et continentale, IMBE UMR 7263 CNRS/IRD/Aix Marseille Université/Avignon Université. Station Marine d'Endoume, rue de la Batterie des Lions, 13007 Marseille, France
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20
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Darling JA, Galil BS, Carvalho GR, Rius M, Viard F, Piraino S. Recommendations for developing and applying genetic tools to assess and manage biological invasions in marine ecosystems. MARINE POLICY 2017; 85:56-64. [PMID: 29681680 PMCID: PMC5909192 DOI: 10.1016/j.marpol.2017.08.014] [Citation(s) in RCA: 37] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/20/2023]
Abstract
The European Union's Marine Strategy Framework Directive (MSFD) aims to adopt integrated ecosystem management approaches to achieve or maintain "Good Environmental Status" for marine waters, habitats and resources, including mitigation of the negative effects of non-indigenous species (NIS). The Directive further seeks to promote broadly standardized monitoring efforts and assessment of temporal trends in marine ecosystem condition, incorporating metrics describing the distribution and impacts of NIS. Accomplishing these goals will require application of advanced tools for NIS surveillance and risk assessment, particularly given known challenges associated with surveying and monitoring with traditional methods. In the past decade, a host of methods based on nucleic acids (DNA and RNA) analysis have been developed or advanced that promise to dramatically enhance capacity in assessing and managing NIS. However, ensuring that these rapidly evolving approaches remain accessible and responsive to the needs of resource managers remains a challenge. This paper provides recommendations for future development of these genetic tools for assessment and management of NIS in marine systems, within the context of the explicit requirements of the MSFD. Issues considered include technological innovation, methodological standardization, data sharing and collaboration, and the critical importance of shared foundational resources, particularly integrated taxonomic expertise. Though the recommendations offered here are not exhaustive, they provide a basis for future intentional (and international) collaborative development of a genetic toolkit for NIS research, capable of fulfilling the immediate and long term goals of marine ecosystem and resource conservation.
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Affiliation(s)
- John A. Darling
- National Exposure Research Laboratory, United States Environmental
Protection Agency, 109 T.W. Alexander Drive, Research Triangle Park, NC 27711,
USA
- Corresponding author.
(J.A. Darling)
| | - Bella S. Galil
- The Steinhardt Museum of Natural History, Israel National Center for
Biodiversity Studies, Tel Aviv University, Tel Aviv 6997801, Israel
| | | | - Marc Rius
- Ocean and Earth Science, National Oceanography Centre, University of
Southampton, UK
- Centre for Ecological Genomics and Wildlife Conservation, University
of Johannesburg, South Africa
| | - Frédérique Viard
- Sorbonne Université, Université Paris 06, CNRS, UMR
7144 AD2M, Station Biologique de Roscoff, Place Georges Teissier, 29680 Roscoff,
France
| | - Stefano Piraino
- Dipartimento di Scienze e Tecnologie Biologiche ed Ambientali,
Università del Salento, Lecce, Italy
- Consorzio Nazionale Interuniversitario per le Scienze del Mare
(CoNISMa), Roma, Italy
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21
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Reverter M, Saulnier D, David R, Bardon-Albaret A, Belliard C, Tapissier-Bontemps N, Lecchini D, Sasal P. Effects of local Polynesian plants and algae on growth and expression of two immune-related genes in orbicular batfish (Platax orbicularis). FISH & SHELLFISH IMMUNOLOGY 2016; 58:82-88. [PMID: 27633677 DOI: 10.1016/j.fsi.2016.09.011] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/08/2016] [Revised: 08/25/2016] [Accepted: 09/11/2016] [Indexed: 06/06/2023]
Abstract
The emerging orbicular batfish (Platax orbicularis) aquaculture is the most important fish aquaculture industry in French Polynesia. However, bacterial infections are causing severe mortality episodes. Therefore, there is an urgent need to find an effective management solution. Besides the supplying difficulty and high costs of veterinary drugs in French Polynesia, batfish aquaculture takes place close to the coral reef, where use of synthetic persistent drugs should be restricted. Medicinal plants and bioactive algae are emerging as a cheaper and more sustainable alternative to chemical drugs. We have studied the effect of local Polynesian plants and the local opportunistic algae Asparagopsis taxiformis on batfish when orally administered. Weight gain and expression of two immune-related genes (lysozyme g - Lys G and transforming growth factor beta - TGF-β1) were studied to analyze immunostimulant activity of plants on P. orbicularis. Results showed that several plants increased Lys G and TGF-β1 expression on orbicular batfish after 2 and 3 weeks of oral administration. A. taxiformis was the plant displaying the most promising results, promoting a weight gain of 24% after 3 weeks of oral administration and significantly increasing the relative amount of both Lys G and TGF-β1 transcripts in kidney and spleen of P. orbicularis.
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Affiliation(s)
- Miriam Reverter
- CRIOBE, USR3278-CNRS/EPHE/UPVD/PSL, University of PerpignanViaDomitia, 52 Avenue Paul Alduy, 66860 Perpignan, France; CRIOBE, USR3278-CNRS/EPHE/UPVD/PSL, BP1013 Papetoai, 98729 Moorea, French Polynesia; Laboratoire d'Excellence "CORAIL", 98729 Moorea, French Polynesia.
| | - Denis Saulnier
- Ifremer, UMR 241 EIO, UPF-ILM-IRD, B.P. 49, 98719 Taravao, Tahiti, French Polynesia; Laboratoire d'Excellence "CORAIL", 98729 Moorea, French Polynesia
| | - Rarahu David
- Ifremer, UMR 241 EIO, UPF-ILM-IRD, B.P. 49, 98719 Taravao, Tahiti, French Polynesia; Service de la Pêche BP 20 Papeete, Tahiti 98713, French Polynesia
| | - Agnès Bardon-Albaret
- Ifremer, UMR 241 EIO, UPF-ILM-IRD, B.P. 49, 98719 Taravao, Tahiti, French Polynesia
| | - Corinne Belliard
- Ifremer, UMR 241 EIO, UPF-ILM-IRD, B.P. 49, 98719 Taravao, Tahiti, French Polynesia
| | - Nathalie Tapissier-Bontemps
- CRIOBE, USR3278-CNRS/EPHE/UPVD/PSL, University of PerpignanViaDomitia, 52 Avenue Paul Alduy, 66860 Perpignan, France; Laboratoire d'Excellence "CORAIL", 98729 Moorea, French Polynesia
| | - David Lecchini
- CRIOBE, USR3278-CNRS/EPHE/UPVD/PSL, BP1013 Papetoai, 98729 Moorea, French Polynesia; Laboratoire d'Excellence "CORAIL", 98729 Moorea, French Polynesia
| | - Pierre Sasal
- CRIOBE, USR3278-CNRS/EPHE/UPVD/PSL, BP1013 Papetoai, 98729 Moorea, French Polynesia; Laboratoire d'Excellence "CORAIL", 98729 Moorea, French Polynesia
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22
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Geoffroy A, Destombe C, Kim B, Mauger S, Raffo MP, Kim MS, Le Gall L. Patterns of genetic diversity of the cryptogenic red alga Polysiphonia morrowii (Ceramiales, Rhodophyta) suggest multiple origins of the Atlantic populations. Ecol Evol 2016; 6:5635-47. [PMID: 27547343 PMCID: PMC4983580 DOI: 10.1002/ece3.2135] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2016] [Revised: 03/22/2016] [Accepted: 03/27/2016] [Indexed: 11/16/2022] Open
Abstract
The red alga Polysiphonia morrowii, native to the North Pacific (Northeast Asia), has recently been reported worldwide. To determine the origin of the French and Argentine populations of this introduced species, we compared samples from these two areas with samples collected in Korea and at Hakodate, Japan, the type locality of the species. Combined analyses of chloroplastic (rbcL) and mitochondrial (cox1) DNA revealed that the French and Argentine populations are closely related and differ substantially from the Korean and Japanese populations. The genetic structure of P. morrowii populations from South Atlantic and North Atlantic, which showed high haplotype diversity compared with populations from the North Pacific, suggested the occurrence of multiple introduction events from areas outside of the so‐called native regions. Although similar, the French and Argentine populations are not genetically identical. Thus, the genetic structure of these two introduced areas may have been modified by cryptic and recurrent introduction events directly from Asia or from other introduced areas that act as introduction relays. In addition, the large number of private cytoplasmic types identified in the two introduced regions strongly suggests that local populations of P. morrowii existed before the recent detection of these invasions. Our results suggest that the most likely scenario is that the source population(s) of the French and Argentine populations was not located only in the North Pacific and/or that P. morrowii is a cryptogenic species.
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Affiliation(s)
- Alexandre Geoffroy
- UPMC Univ Paris 06UMI 3614 Biologie évolutive et écologie des algues Station Biologique de Roscoff Place Georges Teissier 29682 Roscoff France; CNRS UMI 3614 Biologie évolutive et écologie des algues Station Biologique de Roscoff 29682 Roscoff France
| | - Christophe Destombe
- UPMC Univ Paris 06UMI 3614 Biologie évolutive et écologie des algues Station Biologique de Roscoff Place Georges Teissier 29682 Roscoff France; CNRS UMI 3614 Biologie évolutive et écologie des algues Station Biologique de Roscoff 29682 Roscoff France
| | - Byeongseok Kim
- Department of Biology Jeju National University 66 Jejudaehakno Jeju-si, Jeju-do 690-756 Korea
| | - Stéphane Mauger
- UPMC Univ Paris 06UMI 3614 Biologie évolutive et écologie des algues Station Biologique de Roscoff Place Georges Teissier 29682 Roscoff France; CNRS UMI 3614 Biologie évolutive et écologie des algues Station Biologique de Roscoff 29682 Roscoff France
| | - María Paula Raffo
- Laboratorio de Algas Marinas Bentónicas Centro para el Estudio de Sistemas Marinos (CESIMAR) Centro Nacional Patagónico (CENPAT-CONICET) Bvd. Brown 2915 Puerto Madryn U9120ACF Chubut Argentina
| | - Myung Sook Kim
- Department of Biology Jeju National University 66 Jejudaehakno Jeju-si, Jeju-do 690-756 Korea
| | - Line Le Gall
- Muséum National d'Histoire Naturelle (MNHN) Institut de Systématique, Biodiversité, ISYEB - UMR 7205 - CNRS, MNHN, UPMC EPHE 57 rue Cuvier CP 39 75231 Paris Cedex 05 France
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23
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Aires T, Serrão EA, Engelen AH. Host and Environmental Specificity in Bacterial Communities Associated to Two Highly Invasive Marine Species (Genus Asparagopsis). Front Microbiol 2016; 7:559. [PMID: 27148239 PMCID: PMC4839258 DOI: 10.3389/fmicb.2016.00559] [Citation(s) in RCA: 38] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/27/2015] [Accepted: 04/04/2016] [Indexed: 11/29/2022] Open
Abstract
As habitats change due to global and local pressures, population resilience, and adaptive processes depend not only on their gene pools but also on their associated bacteria communities. The hologenome can play a determinant role in adaptive evolution of higher organisms that rely on their bacterial associates for vital processes. In this study, we focus on the associated bacteria of the two most invasive seaweeds in southwest Iberia (coastal mainland) and nearby offshore Atlantic islands, Asparagopsis taxiformis and Asparagopsis armata. Bacterial communities were characterized using 16S rRNA barcoding through 454 next generation sequencing and exploratory shotgun metagenomics to provide functional insights and a backbone for future functional studies. The bacterial community composition was clearly different between the two species A. taxiformis and A. armata and between continental and island habitats. The latter was mainly due to higher abundances of Acidimicrobiales, Sphingomonadales, Xanthomonadales, Myxococcales, and Alteromonadales on the continent. Metabolic assignments for these groups contained a higher number of reads in functions related to oxidative stress and resistance to toxic compounds, more precisely heavy metals. These results are in agreement with their usual association with hydrocarbon degradation and heavy-metals detoxification. In contrast, A. taxiformis from islands contained more bacteria related to oligotrophic environments which might putatively play a role in mineralization of dissolved organic matter. The higher number of functional assignments found in the metagenomes of A. taxiformis collected from Cape Verde Islands suggest a higher contribution of bacteria to compensate nutrient limitation in oligotrophic environments. Our results show that Asparagopsis-associated bacterial communities have host-specificity and are modulated by environmental conditions. Whether this environmental effect reflects the host's selective requirements or the locally available bacteria remains to be addressed. However, the known functional capacities of these bacterial communities indicate their potential for eco-physiological functions that could be valuable for the host fitness.
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Affiliation(s)
- Tânia Aires
- Centro de Ciências do Mar-CIMAR, Universidade do Algarve Faro, Portugal
| | - Ester A Serrão
- Centro de Ciências do Mar-CIMAR, Universidade do Algarve Faro, Portugal
| | - Aschwin H Engelen
- Centro de Ciências do Mar-CIMAR, Universidade do Algarve Faro, Portugal
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24
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Andreakis N, Costello P, Zanolla M, Saunders GW, Mata L. Endemic or introduced? Phylogeography of Asparagopsis (Florideophyceae) in Australia reveals multiple introductions and a new mitochondrial lineage. JOURNAL OF PHYCOLOGY 2016; 52:141-147. [PMID: 26987096 DOI: 10.1111/jpy.12373] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/25/2015] [Accepted: 11/16/2015] [Indexed: 06/05/2023]
Abstract
The red seaweed Asparagopsis taxiformis embodies five cryptic mitochondrial lineages (lineage 1-5) introduced worldwide as a consequence of human mediated transport and climate change. We compared globally collected mitochondrial cox2-3 intergenic spacer sequences with sequences produced from multiple Australian locations and South Korea to identify Asparagopsis lineages and to reveal cryptic introductions. We report A. taxiformis lineage 4 from Cocos (Keeling) Islands, Australia, and the highly invasive Indo-Pacific Mediterranean lineage 2 from South Korea and Lord Howe Island, Australia. Phylogeographic analysis showed a clear haplotype and geographic separation between western Australian and Great Barrier Reef (GBR) isolates belonging to the recently described lineage 5. The same lineage, however, was characterized by a substantial genetic and geographic break between the majority of Australian specimens and Asparagopsis collections from South Solitary Island, Southern GBR, Lord Howe Island, Kermadec Islands, Norfolk Island, New Caledonia and French Polynesia. The disjunct geographic distribution and sequence divergence between these two groups supports the recognition of a sixth cryptic A. taxiformis mitochondrial lineage. As climatic changes accelerate the relocation of biota and offer novel niches for colonization, periodic surveys for early detection of cryptic invasive seaweeds will be critical in determining whether eradication or effective containment of the aliens are feasible.
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Affiliation(s)
- Nikos Andreakis
- Australian Institute of Marine Science, PMB No. 3, Townsville, Queensland, 4810, Australia
- College of Marine and Environmental Sciences, James Cook University, Townsville, Queensland, Australia
| | - Paul Costello
- Australian Institute of Marine Science, PMB No. 3, Townsville, Queensland, 4810, Australia
| | - Marianela Zanolla
- Departamento de Biología Vegetal (Botánica), Universidad de Málaga, Campus de Teatinos s/n, Málaga, 29071, Spain
| | - Gary W Saunders
- Centre for Environmental and Molecular Algal Research, Department of Biology, University of New Brunswick, Fredericton, New Brunswick, Canada, E3B 5A3
| | - Leonardo Mata
- MACRO - the Centre for Macroalgal Resources and Biotechnology, James Cook University, Townsville, Queensland, 4811, Australia
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25
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Pante E, Puillandre N, Viricel A, Arnaud-Haond S, Aurelle D, Castelin M, Chenuil A, Destombe C, Forcioli D, Valero M, Viard F, Samadi S. Species are hypotheses: avoid connectivity assessments based on pillars of sand. Mol Ecol 2015; 24:525-44. [DOI: 10.1111/mec.13048] [Citation(s) in RCA: 135] [Impact Index Per Article: 13.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2014] [Revised: 12/06/2014] [Accepted: 12/13/2014] [Indexed: 01/31/2023]
Affiliation(s)
- Eric Pante
- Littoral, Environnement et Sociétés (LIENSs); UMR 7266 CNRS - Université de La Rochelle; 2 rue Olympe de Gouges 17042 La Rochelle France
| | - Nicolas Puillandre
- ISYEB - UMR 7205 - CNRS, MNHN; UPMC (University Paris 06); EPHE - Muséum national d'Histoire naturelle; Sorbonne Universités; CP26, 57 rue Cuvier F-75231 Paris Cedex 05 France
| | - Amélia Viricel
- Littoral, Environnement et Sociétés (LIENSs); UMR 7266 CNRS - Université de La Rochelle; 2 rue Olympe de Gouges 17042 La Rochelle France
| | | | - Didier Aurelle
- Aix Marseille Université; CNRS, IRD; Avignon Université, IMBE UMR 7263; 13397 Marseille France
| | - Magalie Castelin
- Aquatic Animal Health Section; Fisheries and Oceans Canada; Pacific Biological Station; 3190 Hammond Bay Road Nanaimo BC Canada V9T 6N7
| | - Anne Chenuil
- Aix Marseille Université; CNRS, IRD; Avignon Université, IMBE UMR 7263; 13397 Marseille France
| | - Christophe Destombe
- Sorbonne Universités; UPMC; University Paris 06; Station Biologique de Roscoff F-29680 Roscoff France
- CNRS, Laboratory Evolutionary Biology and Ecology of Algae; Sorbonne Universités; Université Pierre et Marie Curie (UPMC) Univ Paris 06, UMI 3614, UPMC, PUCCh, UACh; Station Biologique de Roscoff F-29680 Roscoff France
| | - Didier Forcioli
- Faculté des Sciences; Université Nice-Sophia-Antipolis, Equipe Symbiose Marine UMR 7138; Parc Valrose 06108 Nice Cedex 2 France
- UMR 7138 Evolution Paris Seine; Université Pierre et Marie Curie - CNRS; 7 Quai St Bernard 75252 Paris Cedex 05 France
| | - Myriam Valero
- Sorbonne Universités; UPMC; University Paris 06; Station Biologique de Roscoff F-29680 Roscoff France
- CNRS, Laboratory Evolutionary Biology and Ecology of Algae; Sorbonne Universités; Université Pierre et Marie Curie (UPMC) Univ Paris 06, UMI 3614, UPMC, PUCCh, UACh; Station Biologique de Roscoff F-29680 Roscoff France
| | - Frédérique Viard
- Sorbonne Universités; UPMC; University Paris 06; Station Biologique de Roscoff F-29680 Roscoff France
- Centre National de la Recherche Scientifique (CNRS); Laboratory Adaptation and Diversity in the Marine Environment; Team Diversity and Connectivity in Coastal Marine Landscapes, UMR 7144; Station Biologique de Roscoff F-29680 Roscoff France
| | - Sarah Samadi
- ISYEB - UMR 7205 - CNRS, MNHN; UPMC (University Paris 06); EPHE - Muséum national d'Histoire naturelle; Sorbonne Universités; CP26, 57 rue Cuvier F-75231 Paris Cedex 05 France
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Rius M, Turon X, Bernardi G, Volckaert FAM, Viard F. Marine invasion genetics: from spatio-temporal patterns to evolutionary outcomes. Biol Invasions 2014. [DOI: 10.1007/s10530-014-0792-0] [Citation(s) in RCA: 35] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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