The Contribution of PGPR in Salt Stress Tolerance in Crops: Unravelling the Molecular Mechanisms of Cross-Talk between Plant and Bacteria

Symbiotic plant-bacterial-fungal interaction orchestrates ethylene and auxin signaling for optimized plant growth

The complex and mutual interactions between plants and their associated microbiota are key for plant survival and fitness. From the myriad of microbes that exist in the soil, plants dynamically engineer their surrounding microbiome in response to varying environmental and nutrient conditions. The notion that the rhizosphere bacterial and fungal community acts in harmony with plants is widely acknowledged, yet little is known about how these microorganisms interact with each other and their host plants. Here, we explored the interaction of two well-studied plant beneficial endophytes, Enterobacter sp. SA187 and the fungus Serendipita indica. We show that these microbes show inhibitory growth in vitro but act in a mutually positive manner in the presence of Arabidopsis as a plant host. Although both microbes can promote plant salinity tolerance, plant resilience is enhanced in the ternary interaction, revealing that the host plant has the ability to positively orchestrate the interactions between microbes to everyone's benefit. In conclusion, this study advances our understanding of plant-microbiome interaction beyond individual plant-microbe relationships, unveiling a new layer of complexity in how plants manage microbial communities for optimal growth and stress resistance.

Harnessing phosphate-solubilizing microorganisms for mitigation of nutritional and environmental stresses, and sustainable crop production

MAIN CONCLUSION

Phosphate-solubilizing microorganisms enhance nutrients availability, mitigate environmental stresses, and increase plant growth. The bioengineering of phosphate-solubilizing microbes and host plants may further improve their efficacy for increasing crop yield. Unsustainable agricultural practices are followed in current crop production systems worldwide for resolving food demand issues of ever-increasing human population. In addition, global food crop production is further affected due to continuous climatic change, erratic rains, and environmental stresses during the recent past causing threat to microbial as well as plant biodiversity. The application of plant beneficial microorganisms into agricultural practices has emerged recently as an innovative and sustainable approach to increase crop yield with limited resources and in vulnerable environment. These beneficial microbes improve crop productivity by enhancing nutrients' availability and mitigation of abiotic stresses along with suppression of plant diseases. However, there have been limited studies on the stress ameliorative role of phosphate-solubilizing microorganisms (PSMs), and there is still a need to elucidate the contribution of PSMs in improving plant health and crop productivity under harsh environmental conditions. This review summarizes the role of PSMs in improving phosphorus availability in soil through solubilization or mineralization of organic phosphate, and by assisting plants in amelioration of environmental stresses. Other beneficial activities of PSMs, such as release of phytohormones, production of ACC deaminase, strengthening of antioxidant system, and induction of systemic resistance, also contribute toward stress mitigation and plant growth promotion under stressful environments. Improvement in efficacy of PSMs and host plants using genetic engineering techniques has been discussed leading to increases in crop yields. However, further research is needed to develop sustainable climate-resilient approach by improving plant growth-promoting activities of PSMs even under environmental stresses to increase soil fertility and crop production in different agroecosystems.

Effects of the plant growth-promoting rhizobacterium Zobellella sp. DQSA1 on alleviating salt-alkali stress in job's tears seedings and its growth-promoting mechanism

Plant probacteria as a sustainable microbial resource are crucial to plant, which not only promote plant growth but also increase the stress resistance of plants. In this study, whole-genome sequencing of Zobellella sp. DQSA1 was performed, and Zobellella sp. DQSA1 was applied to Job's tears seedings under salt-alkali stress. Whole-genome analysis revealed that Zobellella sp. DQSA1 can produce metabolites such as tryptophan, alpha-linolenic acid and other products through metabolism. In response to the action of Zobellella sp. DQSA1, the contents of jasmonic acid (JA) and indole-3-acetic acid (IAA) in the root system increased by 32.5% and 81.4% respectively, whereas the content of abscisic acid (ABA) decreased by 30.0%, and the contents of other endogenous hormones also significantly differed. Additionally, the physiological and biochemical indices related to growth and salinity demonstrated notable differences. Finally, sequencing analysis revealed that 57 differentially expressed genes (DEGs) were involved in 16 Gene Ontology (GO) pathways. Furthermore, the correlations between the contents of endogenous hormones and 57 DEGs were analyzed, and JA was found to be the most significantly correlated. These results provide a theoretical basis for further exploration of the functions and mechanisms of plant growth-promoting rhizobacteria (PGPR) under salt-alkali stress.

Synergistic Effect of Serratia fonticola and Pseudomonas koreensis on Mitigating Salt Stress in Cucumis sativus L

Beneficial microbes enhance plant growth and development, even under stressful conditions. Serratia fonticola (S1T1) and Pseudomonas koreensis (S4T10) are two multi-trait plant growth-promoting rhizobacteria (PGPRs) that are resistant to saline conditions. This study evaluated the synergistic effect of these PGPRs on mitigating salinity stress (200 mM) in Cucumis sativus. Presently, the synergistic effect of both strains enhances the plant growth-promoting attributes of cucumber, and the growth parameters were significantly higher than those of uninoculated plants. The PGPR-treated plants revealed a significantly higher biomass and improved chlorophyll content. The inoculation of S1T1 and S4T10 and the synergistic effect of both promoted 23, 24, and 28% increases, respectively, in the fresh biomass and 16, 19.8, and 24% increases, respectively, in the dry biomass. Similarly, S1T1 and S4T10 and their synergistic effects led to 16.5, 28.4, and 38% increases, respectively, in the water potential and 18, 22, and 28% decreases, respectively, in abscisic acid (ABA). A reduction in the electrolytic leakage (EL) was additional proof of successful PGPR activities. Similarly, a decrease in the antioxidant levels, including those of malondialdehyde (21-30%), hydrogen peroxide (19-38%), and superoxide anions (24-34%), was observed, alongside an increase in antioxidant enzymes such as catalase (22-29%) and superoxide dismutase (17-27%). Additionally, the synergistic inoculation of the PGPRs enhanced the NaCl stress tolerance by upregulating the expression of the ion transporter genes HKT1 (1-2-fold), NHX (1-3-fold), and SOS1 (2-4-fold). Conclusively, the synergistic effect of the multi-trait PGPRs significantly enhances C. sativus L. growth under salt stress.

Comparison of Two Bacillus Strains Isolated from the Coastal Zone in Barley (Hordeum vulgare L.) Under Salt Stress

Salt stress is one of the most important abiotic stress factors that negatively affects sustainable crop production, agricultural productivity, and microbial life. Increasing salt stress negatively affects the growth and development of barley, posing a threat to global food security. It is now known that inoculation of plant growth-promoting rhizobacteria (PGPR) has significant potential in increasing stress tolerance and yield in agricultural products. This study focused on the effects of Bacillus cereus CUN6 and Bacillus thuringiensis SIRB2, isolated from the coastal zone and tested for their PGPR capacities, on physiological (root length, shoot length, biomass, dry weight) and biochemical (total chlorophyll, total protein, hydrogen peroxide, lipid peroxidation, peroxidase activity (POX), catalase activity (CAT)) analyses in Hordeum vulgare L. seedlings under salt stress. The results showed that the two bacterial inoculations alleviated the negative effects of salt stress by increasing the root-shoot length, biomass, dry weight, chlorophyll content, and total protein content in barley plants. However, B.thuringiensis increased growth and development especially in root length, biomass, and dry weight compared to B.cereus. On the other hand, B.cereus significantly increased root length, biomass, and chlorophyll content under salt stress; these increases were 17%, 5%, and 7%, respectively. B.thuringiensis chlorophyll content increased by 4% in 300 mM NaCl compared to the control. When compared in terms of the antioxidant defense system, B.thuringiensis inoculation was more effective on CAT activity, while B.cereus inoculation was more effective on POX activity. Under salt stress, B.cereus and B.thuringiensis inoculation significantly decreased H2O2 content in barley; these decreases were 16% and 10%, respectively. Additionally, TBARs content was significantly decreased by B.cereus and B.thuringiensis inoculation under salt stress; these decreases were determined as 8% and 9%, respectively, compared to the control. These results indicated that both bacterial inoculations can alleviate the salt tolerance of barley seedlings by regulating antioxidant metabolism. This research focused on the potential of B.cereus and B.thuringiensis as biofertilizers against salt stress in barley based on physiological and biochemical analysis.

Stutzerimonas stutzeri culture enhances microbial community structure and tomato seedling growth in saline soil

AIMS

Plant growth-promoting rhizobacteria (PGPR) improve microbial community structure, promote crop growth, and reduce greenhouse gas emissions in agricultural soils; however, the effects of PGPR fermentation on the growth and salt tolerance of tomato plants remain unclear. In this study, we aimed to investigate the effects of the PGPR Stutzerimonas stutzeri NRCB010 on the microbial communities, tomato growth, and nitrous oxide (N2O) emissions in saline soil by performing a greenhouse pot experiment.

METHODS AND RESULTS

The experiment was conducted under two soil salt concentrations (0 and 3 g kg-1 NaCl) and three treatments (LSFJ broth, NRCB010 cells, and NRCB010 culture). Both salt stress and NRCB010 treatments significantly affected the physicochemical properties and microbial community structure of tomato rhizosphere soil. Treatment with 3 g kg-1 NaCl significantly reduced the shoot and root dry weights of the plants compared with those of the control plants. Application of NRCB010 cells as well as that of culture promoted the growth of tomato seedlings and alleviated salt stress. The copy number changes in the nosZⅠ gene on day 3 and amoA gene on day 25 demonstrated that NRCB010 cells significantly reduced soil N2O emissions when treated with 0 g kg-1 NaCl. Furthermore, soil physicochemical properties, plant biomass, and soil microbial diversity were correlated with each other.

CONCLUSIONS

The results emphasize the enormous potential of S. stutzeri NRCB010 culture to resist abiotic stress, promote crop growth, and improve the rhizosphere soil microenvironment; however, its ability to decrease N2O emissions is constrained by soil salinity.

Using Klebsiella sp. and Pseudomonas sp. to Study the Mechanism of Improving Maize Seedling Growth Under Saline Stress

The increasing salinization of cultivated soil worldwide has led to a significant reduction in maize production. Using saline-alkaline-tolerant growth-promoting bacteria (PGPR) in the rhizosphere can significantly improve the saline tolerance of maize and ensure the stability of maize yields, which has become a global research hotspot. This study screened salt-tolerant microorganisms Klebsiella sp. (GF2) and Pseudomonas sp. (GF7) from saline soil to clarify the mechanism in improving the saline tolerance of maize. In this study, different application treatments (GF2, GF7, and GF2 + GF7) and no application (CK) were set up to explore the potential ecological relationships between the saline tolerance of maize seedlings, soil characteristics, and microorganisms. The results showed that co-occurrence network and Zi-Pi analysis identified Klebsiella and Pseudomonas as core microbial communities in the rhizosphere soil of maize seedlings grown in saline soil. The deterministic process of microbial assembly mainly controlled the bacterial community, whereas bacteria and fungi were governed by random processes. The application of saline-alkaline-resistant PGPR under saline stress significantly promoted maize seedling growth, increased the activity of soil growth-promoting enzymes, and enhanced total nitrogen, soil organic carbon, and microbial carbon and nitrogen contents. Additionally, it reduced soil salt and alkali ion concentrations [electrical conductivity (EC) and exchangeable Na+]. Among them, GF2 + GF7 treatment had the best effect, indicating that saline-alkaline-tolerant PGPR could directly or indirectly improve the saline tolerance of maize seedlings by improving the rhizosphere soil ecological environment. EC was the determining factor to promote maize seedling growth under saline-alkaline stress (5.56%; p < 0.01). The results provided an important theoretical reference that deciphers the role of soil factors and microecology in enhancing the saline tolerance of maize.

The Potential Role of Brassica napus Metallothioneins in Salt Stress and Interactions with Plant Growth-Promoting Bacteria

BACKGROUND/OBJECTIVES

Plant metallothioneins (MTs) are low-molecular-weight proteins involved in heavy metal binding and response to stress conditions. This work aimed to analyse canola (Brassica napus L.) MTs (BnMT1-4) response to salinity and plant interaction with bacteria.

METHODS

(1) We tested germination and canola growth and development in the presence of sodium chloride and bacteria Serratia plymuthica; (2) We analysed phytohormones content using LC-MS/MS; (3) We identified in silico cis-regulatory elements in promoters of BnMT1-4 genes; and (4) we investigated BnMT1-4 genes' expression in B. napus.

RESULTS

Under saline conditions, canola germination and plant growth were notably inhibited, whereas inoculation of seeds with S. plymuthica significantly stimulated the analysed physiological traits of B. napus. The content of auxin, abscisic acid, jasmonates, gibberellins, and salicylic acid in B. napus was significantly affected by salinity and modulated by S. plymuthica presence. The promoter regions of the BnMT1-4 genes contain numerous regulatory elements controlled by light, hormones, and various stresses. Interestingly, the expression of BnMT1-3 genes was down-regulated under salt stress, while BnMT4 transcript levels increased strongly at the highest salt concentrations with and without S. plymuthica present.

CONCLUSIONS

The results show that BnMT genes are differently affected by salinity and bacteria S. plymuthica and significantly correlate with particular phytohormones content in canola tissues, confirming the diversified functions of MTs in plant responses to changing environment.

Application of Synthetic Microbial Communities of Kalidium schrenkianum in Enhancing Wheat Salt Stress Tolerance

Soil salinization poses a significant challenge to global agriculture, particularly in arid and semi-arid regions like Xinjiang. Kalidium schrenkianum, a halophytic plant adapted to saline-alkaline conditions, harbors endophytic microorganisms with potential plant growth-promoting properties. In this study, 177 endophytic bacterial strains were isolated from K. schrenkianum, and 11 key strains were identified through functional screening based on salt tolerance, nutrient solubilization, and growth-promoting traits. Synthetic microbial communities (SMCs) were then constructed using these strains and optimized to enhance wheat growth under salt stress. The SMCs significantly improved seed germination, root length, and seedling vigor in both spring and winter wheat in hydroponic and pot experiments. Furthermore, the SMCs enhanced the activities of antioxidant enzymes, including superoxide dismutase (SOD), peroxidase (POD), catalase (CAT), and levels of malondialdehyde (MDA) and proline (PRO). They also reduced oxidative stress and improved chlorophyll content in wheat seedlings. These results demonstrate the potential of microbial consortia derived from extreme environments as eco-friendly biofertilizers for improving crop performance in saline soils, offering a sustainable alternative to chemical fertilizers and contributing to agricultural resilience and productivity.

Salinity Stress Resilience in Sorghum bicolor through Pseudomonas-Mediated Modulation of Growth, Antioxidant System, and Eco-Physiological Adaptations

Increased soluble salts in soil and irrigation water threaten the sustainability of crops. This causes food insecurity directly by reducing the staple crop yield and indirectly by limiting fodder and forage production. Recently, plant-growth-promoting rhizosphere microorganism utilization improved crop productivity under stress. Therefore, this research was conducted to find the Sorghum bicolor growth improvement potential by exogenous application of five different Pseudomonas strains under salinity in a pot experiment. The salinity was applied with a 1/2-strength Hoagland's nutrient solution as 0 and 100 mM NaCl for 30 days. Results indicated that salinity reduced the vegetative growth parameters and stress-responsive biochemicals in nonbacterial treated plants. However, Pseudomonas strains applied to plants exhibited notable increases in growth, relative water content, antioxidant enzyme activities, osmolytes, and photosynthetic pigments under salinity. The ionic imbalance was also reduced due to Pseudomonas strains by improving K+ and K+/Na+ ratios under salinity. P. aeruginosa strain SAHK (OQ194056) and P. putida strain AHK_SHA007 (OR468335) were found to be promising compared to other strains in increasing growth and stress tolerance. The augmentation of the plant's antioxidant system and maintenance of ion homeostasis by Pseudomonas strains served as a strategy to enhance the plant salt tolerance.

Biochemical, photosynthetic and metabolomics insights of single and combined effects of salinity, heat, cold and drought in Arabidopsis

Ensuring food security is one of the main challenges related to a growing global population under climate change conditions. The increasing soil salinity levels, drought, heatwaves, and late chilling severely threaten crops and often co-occur in field conditions. This work aims to provide deeper insight into the impact of single vs. combined abiotic stresses at the growth, biochemical and photosynthetic levels in Arabidopsis thaliana (L.). Reduced QY max was recorded in salinity-stressed plants, NPQ increased in heat and salinity single and combined stresses, and qP decreased in combined stresses. MDA and H2O2 content were consistently altered under all stress conditions, but higher values were recorded under salinity alone and in combination. Salinity alone and in stress combinations (especially with cold) provided a stronger hierarchical effect. Despite glycine and GABA osmolytes not significantly changing, proline highlighted the hierarchically stronger impact of salinity, while glycine-betaine was decreased under drought combinations. Untargeted metabolomics pointed out distinct metabolic reprogramming triggered by the different stress conditions, alone or in combination. Pathway analysis revealed that abiotic stresses significantly affected hormones, amino acids and derivates, and secondary metabolites. Flavonoids accumulated under drought (alone and combined with heat and cold stresses), while N-containing compounds decreased under all combined stresses. Looking at the interactions across the parameters investigated, antagonistic, additive, or synergistic effects could be observed depending on the biochemical process considered. Notwithstanding, these results contribute to delving into the impact of various stress combinations, hierarchically highlighting the stress-specific effects and pointing out different combinations.

Proteomics, Metabolomics and Docking Analyses Provide Insights into Adaptation Strategies of Staphylococcus warneri CPD1 to Osmotic Stress and Its Influence on Wheat Growth

Staphylococcus warneri is a gram-positive mesophilic bacterium, resilient to extreme environmental conditions. To unravel its Osmotic Tolerance Response (OTR), we conducted proteomic and metabolomic analyses under drought (PEG) and salt (NaCl) stresses. Our findings revealed 1340 differentially expressed proteins (DEPs) across all treatments. Interestingly, majority of these DEPs were part of common pathways activated by S. warneri. CPD1 in response to osmotic stress. Notably, the bacterial isolate exhibited increased expression of lysophospholipases associated with biofilm formation and protection from environmental stresses, transglycosylases involved in peptidoglycan biosynthesis, and acetoin reductase linked to acetoin metabolism. The upregulation of global ion transporters, including ABC transporters, potassium ion transport, and glutamate transport, indicated the bacterium's ability to maintain ionic balance under stress conditions. Protein-protein docking analysis revealed highest interactions with thioredoxin and alpha-acetolactate decarboxylase, highlighting their crucial roles in the mechanisms of osmotic stress tolerance in S. warneri CPD1. Metabolomic results demonstrated significant alterations in fatty acids and amino acids. In the greenhouse experiment, the bacterial isolate significantly enhanced wheat biomass, nutrient content, photosynthesis, and proline levels under stress conditions, making it a promising bacterial inoculant and biostimulant for improving crop productivity in challenging environments.

Cakile maritima: A Halophyte Model to Study Salt Tolerance Mechanisms and Potential Useful Crop for Sustainable Saline Agriculture in the Context of Climate Change

Salinity is an increasing problem for agriculture. Most plant species tolerate low or, at best, moderate soil salinities. However, a small (<1%) proportion of species, termed halophytes, can survive and complete their life cycle in natural habitats with salinities equivalent to 200 mM NaCl or more. Cakile maritima is a succulent annual halophyte belonging to the Brassicaceae family; it is dispersed worldwide and mainly grows in foreshores. Cakile maritima growth is optimal under slight (i.e., 100 mM NaCl) saline conditions, measured by biomass and seed production. Higher salt concentrations, up to 500 mM NaCl, significantly impact its growth but do not compromise its survival. Cakile maritima alleviates sodium toxicity through different strategies, including anatomical and morphological adaptations, ion transport regulation, biosynthesis of osmolytes, and activation of antioxidative mechanisms. The species is potentially useful as a cash crop for the so-called biosaline agriculture due to its production of secondary metabolites of medical and nutritional interest and the high oil accumulation in its seeds. In this review, we highlight the relevance of this species as a model for studying the basic mechanisms of salt tolerance and for sustainable biosaline agriculture in the context of soil salination and climate change.

The role of drought response genes and plant growth promoting bacteria on plant growth promotion under sustainable agriculture: A review

Drought is a major stressor that poses significant challenges for agricultural practices. It becomes difficult to meet the global demand for food crops and fodder. Plant physiology, physico-chemistry and morphology changes in plants like decreased photosynthesis and transpiration rate, overproduction of reactive oxygen species, repressed shoot and root shoot growth and modified stress signalling pathways by drought, lead to detrimental impacts on plant development and output. Coping with drought stress requires a variety of adaptations and mitigation techniques. Crop yields could be effectively increased by employing plant growth-promoting rhizobacteria (PGPR), which operate through many mechanisms. These vital microbes colonise the rhizosphere of crops and promote drought resistance by producing exopolysaccharides (EPS), 1-aminocyclopropane-1-carboxylate (ACC) deaminase and phytohormones including volatile compounds. The upregulation or downregulation of stress-responsive genes causes changes in root architecture due to acquiring drought resistance. Further, PGPR induces osmolyte and antioxidant accumulation. Another key feature of microbial communities associated with crops includes induced systemic tolerance and the production of free radical-scavenging enzymes. This review is focused on detailing the role of PGPR in assisting plants to adapt to drought stress.

Bacterial exopolysaccharide amendment improves the shelf life and functional efficacy of bioinoculant under salinity stress

AIM

Bacterial exopolysaccharides (EPS) possess numerous properties beneficial for the growth of microbes and plants under hostile conditions. The study aimed to develop a bioformulation with bacterial EPS to enhance the bioinoculant's shelf life and functional efficacy under salinity stress.

METHODS AND RESULTS

High EPS-producing and salt-tolerant bacterial strain (Bacillus haynessi SD2) exhibiting auxin-production, phosphate-solubilization, and biofilm-forming ability, was selected. EPS-based bioformulation of SD2 improved the growth of three legumes under salt stress, from which pigeonpea was selected for further experiments. SD2 improved the growth and lowered the accumulation of stress markers in plants under salt stress. Bioformulations with varying EPS concentrations (1% and 2%) were stored for 6 months at 4°C, 30°C, and 37°C to assess their shelf life and functional efficacy. The shelf life and efficacy of EPS-based bioformulation were sustained even after 6 months of storage at high temperature, enhancing pigeonpea growth under stress in both control and natural conditions. However, the efficacy of non EPS-based bioformulation declined following four months of storage. The bioformulation (with 1% EPS) modulated bacterial abundance in the plant's rhizosphere under stress conditions.

CONCLUSION

The study brings forth a new strategy for developing next-generation bioformulations with higher shelf life and efficacy for salinity stress management in pigeonpea.

Plant growth-promoting rhizobacteria Pseudomonas aeruginosa HG28-5 improves salt tolerance by regulating Na+/K+ homeostasis and ABA signaling pathway in tomato

Salinity stress badly restricts the growth, yield and quality of vegetable crops. Plant growth-promoting rhizobacteria (PGPR) is a friendly and effective mean to enhance plant growth and salt tolerance. However, information on the regulatory mechanism of PGPR on vegetable crops in response to salt stress is still incomplete. Here, we screened a novel salt-tolerant PGPR strain Pseudomonas aeruginosa HG28-5 by evaluating the tomatoes growth performance, chlorophyll fluorescence index, and relative electrolyte leakage (REL) under normal and salinity conditions. Results showed that HG28-5 colonization improved seedling growth parameters by increasing the plant height (23.7%), stem diameter (14.6%), fresh and dry weight in the shoot (60.3%, 91.1%) and root (70.1%, 92.5%), compared to salt-stressed plants without colonization. Likewise, HG28-5 increased levels of maximum photochemical efficiency of PSII (Fv/Fm) (99.3%), the antioxidant enzyme activities as superoxide dismutase (SOD, 85.5%), peroxidase (POD, 35.2%), catalase (CAT, 20.6%), and reduced the REL (48.2%), MDA content (41.3%) and ROS accumulation in leaves of WT tomatoes under salt stress in comparison with the plants treated with NaCl alone. Importantly, Na+ content of HG28-5 colonized salt-stressed WT plants were decreased by15.5% in the leaves and 26.6% in the roots in the corresponding non-colonized salt-stressed plants, which may be attributed to the higher K+ concentration and SOS1, SOS2, HKT1;2, NHX1 transcript levels in leaves of colonized plants under saline condition. Interestingly, increased abscisic acid (ABA) content and upregulation of ABA pathway genes (ABA synthesis-related genes NCED1, NCED2, NCED4, NECD6 and signal genes ABF4, ABI5, and AREB) were observed in HG28-5 inoculated salt-stressed WT plants. ABA-deficient mutant (not) with NCED1 deficiency abolishes the effect of HG28-5 on alleviating salt stress in tomato, as exhibited by the substantial rise of REL and ROS accumulation and sharp drop of Fv/Fm in the leaves of not mutant plants. Notably, HG28-5 colonization enhances tomatoes fruit yield by 54.9% and 52.4% under normal and saline water irrigation, respectively. Overall, our study shows that HG28-5 colonization can significantly enhance salt tolerance and improved fruit yield by a variety of plant protection mechanism, including reducing oxidative stress, regulating plant growth, Na+/K+ homeostasis and ABA signaling pathways in tomato. The findings not only deepen our understanding of PGPR regulation plant growth and salt tolerance but also allow us to apply HG28-5 as a microbial fertilizer for agricultural production in high-salinity areas.

Microbacterium azadirachtae CNUC13 Enhances Salt Tolerance in Maize by Modulating Osmotic and Oxidative Stress

Soil salinization is one of the leading threats to global ecosystems, food security, and crop production. Plant growth-promoting rhizobacteria (PGPRs) are potential bioinoculants that offer an alternative eco-friendly agricultural approach to enhance crop productivity from salt-deteriorating lands. The current work presents bacterial strain CNUC13 from maize rhizosphere soil that exerted several PGPR traits and abiotic stress tolerance. The strain tolerated up to 1000 mM NaCl and 30% polyethylene glycol (PEG) 6000 and showed plant growth-promoting (PGP) traits, including the production of indole-3-acetic acid (IAA) and siderophore as well as phosphate solubilization. Phylogenetic analysis revealed that strain CNUC13 was Microbacterium azadirachtae. Maize plants exposed to high salinity exhibited osmotic and oxidative stresses, inhibition of seed germination, plant growth, and reduction in photosynthetic pigments. However, maize seedlings inoculated with strain CNUC13 resulted in significantly improved germination rates and seedling growth under the salt-stressed condition. Specifically, compared with the untreated control group, CNUC13-treated seedlings exhibited increased biomass, including fresh weight and root system proliferation. CNUC13 treatment also enhanced photosynthetic pigments (chlorophyll and carotenoids), reduced the accumulation of osmotic (proline) and oxidative (hydrogen peroxide and malondialdehyde) stress indicators, and positively influenced the activities of antioxidant enzymes (catalase, superoxide dismutase, and peroxidase). As a result, CNUC13 treatment alleviated oxidative stress and promoted salt tolerance in maize. Overall, this study demonstrates that M. azadirachtae CNUC13 significantly enhances the growth of salt-stressed maize seedlings by improving photosynthetic efficiency, osmotic regulators, oxidative stress resilience, and antioxidant enzyme activity. These findings emphasize the potential of utilizing M. azadirachtae CNUC13 as a bioinoculant to enhance salt stress tolerance in maize, providing an environmentally friendly approach to mitigate the negative effects of salinity and promote sustainable agriculture.

Halotolerant PGPB Staphylococcus sciuri ET101 protects photosynthesis through activation of redox dissipation pathways in Lycopersicon esculentum

Photosynthesis is known to be seriously affected by salt stress. The stress induced membrane damage leads to disrupted photosynthetic components causing imbalance between production and utilization of ATP/NADPH with generation of ROS leading to photoinhibition and photodamage. In the current study, role of halotolerant plant growth promoting bacteria (PGPB) Staphylococcus sciuri ET101 in protection of photosynthesis in tomato plants during salinity stress was evaluated by analysing changes in antioxidant defense and activation of redox dissipation pathways. Inoculation of S. sciuri ET101 significantly enhanced the growth of tomato plants with significantly higher photosynthetic rates (PN) under normal and salinity stress conditions. Further, increased membrane stability, soluble sugar accumulation and significant decrease in malondialdehyde (MDA) content in leaves of ET101 inoculated tomato plants under normal and salinity were observed along with increased expression of antioxidant genes for efficient ROS detoxification and suppression of oxidative damage. Additionally, salinity induced decrease in rate of photosynthesis (PN) due to lowered chloroplastic CO2 concentration (Cc) attributed by low mesophyll conductance (gm) in uninoculated plants was alleviated by ET101 inoculation showing significantly higher carboxylation rate (Vcmax), RuBP generation (Jmax) and increased photorespiration (PR). The genes involved in photorespiratory process, cyclic electron flow (CEF), and alternative oxidase (AOX) pathway of mitochondrial respiration were abundantly expressed in leaves of ET101 inoculated plants indicating their involvement in protecting photosynthesis from salt stress induced photoinhibition. Collectively, our results indicated that S. sciuri ET101 has the potential in protecting photosynthesis of tomato plants under salinity stress through activation of redox dissipation pathways.

Bacterial Endophytes from Legumes Native to Arid Environments Are Promising Tools to Improve Mesorhizobium-Chickpea Symbiosis under Salinity

Symbiotic nitrogen fixation is a major contributor of N in agricultural ecosystems, but the establishment of legume-rhizobium symbiosis is highly affected by soil salinity. Our interest is focused on the use of non-rhizobial endophytes to assist the symbiosis between chickpea and its microsymbiont under salinity to avoid loss of production and fertility. Our aims were (1) to investigate the impact of salinity on both symbiotic partners; including on early events of the Mesorhizobium-chickpea symbiosis, and (2) to evaluate the potential of four non-rhizobial endophytes isolated from legumes native to arid regions (Phyllobacterium salinisoli, P. ifriqiyense, Xanthomonas translucens, and Cupriavidus respiraculi) to promote chickpea growth and nodulation under salinity. Our results show a significant reduction in chickpea seed germination rate and in the microsymbiont Mesorhizobium ciceri LMS-1 growth under different levels of salinity. The composition of phenolic compounds in chickpea root exudates significantly changed when the plants were subjected to salinity, which in turn affected the nod genes expression in LMS-1. Furthermore, the LMS-1 response to root exudate stimuli was suppressed by the presence of salinity (250 mM NaCl). On the contrary, a significant upregulation of exoY and otsA genes, which are involved in exopolysaccharide and trehalose biosynthesis, respectively, was registered in salt-stressed LMS-1 cells. In addition, chickpea co-inoculation with LMS-1 along with the consortium containing two non-rhizobial bacterial endophytes, P. salinisoli and X. translucens, resulted in significant improvement of the chickpea growth and the symbiotic performance of LMS-1 under salinity. These results indicate that this non-rhizobial endophytic consortium may be an appropriate ecological and safe tool to improve chickpea growth and its adaptation to salt-degraded soils.

Characterization of Rhizosphere Microbial Diversity and Selection of Plant-Growth-Promoting Bacteria at the Flowering and Fruiting Stages of Rapeseed

Plant rhizosphere microorganisms play an important role in modulating plant growth and productivity. This study aimed to elucidate the diversity of rhizosphere microorganisms at the flowering and fruiting stages of rapeseed (Brassica napus). Microbial communities in rhizosphere soils were analyzed via high-throughput sequencing of 16S rRNA for bacteria and internal transcribed spacer (ITS) DNA regions for fungi. A total of 401 species of bacteria and 49 species of fungi in the rhizosphere soil samples were found in three different samples. The composition and diversity of rhizosphere microbial communities were significantly different at different stages of rapeseed growth. Plant-growth-promoting rhizobacteria (PGPRs) have been widely applied to improve plant growth, health, and production. Thirty-four and thirty-one PGPR strains were isolated from the rhizosphere soil samples collected at the flowering and fruiting stages of rapeseed, respectively. Different inorganic phosphorus- and silicate-solubilizing and auxin-producing capabilities were found in different strains, in addition to different heavy-metal resistances. This study deepens the understanding of the microbial diversity in the rapeseed rhizosphere and provides a microbial perspective of sustainable rapeseed cultivation.

A novel PGPR strain homologous to Beijerinckia fluminensis induces biochemical and molecular changes involved in Arabidopsis thaliana salt tolerance

The use of PGPR is widely accepted as a promising tool for a more sustainable agricultural production and improved plant abiotic stress resistance. This study tested the ability of PVr_9, a novel bacterial strain, homologous to Beijerinckia fluminensis, to increase salt stress tolerance in A. thaliana. In vitro plantlets inoculated with PVr_9 and treated with 150 mM NaCl showed a reduction in primary root growth inhibition compared to uninoculated ones, and a leaf area significantly less affected by salt. Furthermore, salt-stressed PVr_9-inoculated plants had low ROS and 8-oxo-dG, osmolytes, and ABA content along with a modulation in antioxidant enzymatic activities. A significant decrease in Na+ in the leaves and a corresponding increase in the roots were also observed in salt-stressed inoculated plants. SOS1, NHX1 genes involved in plant salt tolerance, were up-regulated in PVr_9-inoculated plants, while different MYB genes involved in salt stress signal response were down-regulated in both roots and shoots. Thus, PVr_9 was able to increase salt tolerance in A. thaliana, thereby suggesting a role in ion homeostasis by reducing salt stress rather than inhibiting total Na+ uptake. These results showed a possible molecular mechanism of crosstalk between PVr_9 and plant roots to enhance salt tolerance, and highlighted this bacterium as a promising PGPR for field applications on agronomical crops.

Isolation and evaluation of Qatari soil rhizobacteria for antagonistic potential against phytopathogens and growth promotion in tomato plants

Plant growth promoting rhizobacteria are a diverse group of microorganisms that enhance the growth of plants under various conditions. In this study, 55 isolates of endogenous rhizobacteria were collected from the rhizosphere of Avicennia marina, Suaeda vermiculata, Salsola soda, Anabasis setifera, Salicornia europaea, Arthrocnemum macrostachyum, Limonium axillare, Tetraena qatarensis, Aeluropus lagopoides, and Prosopis juliflora. The isolates were evaluated in-vitro for their antagonist potential against Fusarium oxysporum and Botrytis cinerea using the dual culture technique, where the maximum growth inhibition reached 49% and 57%, respectively. In-vivo evaluation was accomplished to determine the growth-promoting potential of the rhizobacteria under greenhouse conditions where the strain ANABR3 (Bacillus subtilis) showed the strongest growth-promoting effects. Further in-vivo testing regarding the effectiveness of rhizobacteria in the presence of the phytopathogen was also completed using the Hoagland medium. LEMR3 and SALIR5 (both identified as two strains of B. subtilis) supported the tomato seedlings to overcome the disease and significantly (p ≤ 0.05) increased above and belowground biomass compared to the control. Additionally, several characterizing tests were carried out on the selected strains, these strains were found to possess numerous features that promote plant growth directly and indirectly such as the production of IAA, HCN, hydrolytic enzymes, ACC deaminase, NH3, and some rhizobacteria were capable of phosphate solubilization. In conclusion, this study showed that local rhizobacterial isolates collected from arid lands possess valuable traits, making them promising bio-control agents and bio-fertilizers for agricultural purposes.

The Potential of Endophytes in Improving Salt-Alkali Tolerance and Salinity Resistance in Plants

Ensuring food security for the global population is a ceaseless and critical issue. However, high-salinity and high-alkalinity levels can harm agricultural yields throughout large areas, even in largely agricultural countries, such as China. Various physical and chemical treatments have been employed in different locations to mitigate high salinity and alkalinity but their effects have been minimal. Numerous researchers have recently focused on developing effective and environmentally friendly biological treatments. Endophytes, which are naturally occurring and abundant in plants, retain many of the same characteristics of plants owing to their simultaneous evolution. Therefore, extraction of endophytes from salt-tolerant plants for managing plant growth in saline-alkali soils has become an important research topic. This extraction indicates that the soil environment can be fundamentally improved, and the signaling pathways of plants can be altered to increase their defense capacity, and can even be inherited to ensure lasting efficacy. This study discusses the direct and indirect means by which plant endophytes mitigate the effects of plant salinity stress that have been observed in recent years.

Halomonas ventosae JPT10 promotes salt tolerance in foxtail millet (Setaria italica) by affecting the levels of multiple antioxidants and phytohormones

Plant growth-promoting bacterias (PGPBs) can increase crop output under normal and abiotic conditions. However, the mechanisms underlying the plant salt tolerance-promoting role of PGPBs still remain largely unknown. In this study, we demonstrated that Halomonas ventosae JPT10 promoted the salt tolerance of both dicots and monocots. Physiological analysis revealed that JPT10 reduced reactive oxygen species accumulation by improving the antioxidant capability of foxtail millet seedlings. The metabolomic analysis of JPT10-inoculated foxtail millet seedlings led to the identification of 438 diversely accumulated metabolites, including flavonoids, phenolic acids, lignans, coumarins, sugar, alkaloids, organic acids, and lipids, under salt stress. Exogenous apigenin and chlorogenic acid increased the salt tolerance of foxtail millet seedlings. Simultaneously, JPT10 led to greater amounts of abscisic acid (ABA), indole-3-acetic acid (IAA), salicylic acid (SA), and their derivatives but lower levels of 12-oxo-phytodienoic acid (OPDA), jasmonate (JA), and JA-isoleucine (JA-Ile) under salt stress. Exogenous JA, methyl-JA, and OPDA intensified, whereas ibuprofen or phenitone, two inhibitors of JA and OPDA biosynthesis, partially reversed, the growth inhibition of foxtail millet seedlings caused by salt stress. Our results shed light on the response of foxtail millet seedlings to H. ventosae under salt stress and provide potential compounds to increase salt tolerance in foxtail millet and other crops.