Mechanism of plant mediated methane emission in tropical lowland rice

Floating plants reduced methane fluxes from wetlands by creating a habitat conducive to methane oxidation

Wetlands are one of the important natural sources of atmospheric methane (CH4), as an important part of wetlands, floating plants can be expected to affect methane release. However, the effects of floating plants on methane release are limited. In this study, methane fluxes, physiochemical properties of the overlying water, methane oxidation potential and rhizospheric bacterial community were investigated in simulated wetlands with floating plants Eichhornia crassipes, Hydrocharis dubia, and Trapa natans. We found that E. crassipes, H. dubia, and T. natans plants could inhibit 84.31% - 97.31%, 4.98% - 88.91% and 43.62% - 92.51% of methane fluxes at interface of water-atmosphere compared to Control, respectively. Methane fluxes were negatively related to nutrients concentration in water column but positively related to the aerenchyma proportions of roots, stems, and leaves. At the same biomass, root of E. crassipes (36.44%) had the highest methane oxidation potential, followed by H. dubia (12.99%) and T. natans (11.23%). Forty-five bacterial phyla in total were identified on roots of three plants and 7 bacterial genera (2.10% - 3.33%) were known methanotrophs. Type I methanotrophs accounted for 95.07% of total methanotrophs. The pmoA gene abundances ranged from 1.90 × 1016 to 2.30 × 1018 copies/g fresh weight of root biofilms. Abundances of pmoA gene was significantly positively correlated with environmental parameters. Methylotrophy (5.40%) and methanotrophy (3.75%) function were closely related to methane oxidation. This study highlights that floating plant restoration can purify water and promote carbon neutrality partially by reducing methane fluxes through methane oxidation in wetlands.

Application of iron and steel slags in mitigating greenhouse gas emissions: A review

The comprehensive consideration of climate warming and by-product management in the iron and steel industry, has a significant impact on the realization of environmental protection and green production. Blast furnace slag (BFS) and steel slag (SS), collectively called iron and steel slags, are the main by-products of steelmaking. The economical and efficient use of iron and steel slags to reduce greenhouse gas (GHG) emissions is an urgent problem to be solved. This paper reviewed the carbonization and waste heat recovery of iron and steel slags, and the utilization of iron and steel slags as soil amendments, discussed their application status and limitations in GHG reduction. Iron and steel slags are rich in CaO, which can be used as CO₂ adsorbents to achieve a maximum concentration of 0.4-0.5 kg CO₂/kg SS. Blast furnace molten slag contains a considerable amount of waste heat, and thermal methods can recover more than 60 % of the heat energy. Chemical methods can use waste heat in the reaction to generate gas fuel, and iron in slags can be used as a catalytic component to promote chemical reaction. Waste heat recovery saves fuel and reduces the CO₂ emissions caused by combustion. When iron and steel slags are used as soil amendments, the iron oxides, alkaline substances, and SiO₂ in iron and steel slags can affect the emission of CH₄, N₂O, and CO₂ from soil, microorganisms, and crops, and achieve a maximum reduction of more than 60 % of the overall GHG of paddy fields. Finally, This paper provided valuable suggestions for future GHG reduction studies of iron and steel slags in energy, industry, and agriculture.

Elucidation of dominant energy metabolic pathways of methane, sulphur and nitrogen in respect to mangrove-degradation for climate change mitigation

Mangroves play a key role in ecosystem balancing and climate change mitigation. It acts as a source and sink of methane (CH₄), a major greenhouse gas responsible for climate change. Energy metabolic pathways of methane production (methanogenesis) and oxidation (methanotrophy) are directly driven by sulphur (S) and nitrogen (N) metabolism and salinity in coastal wetlands. To investigate, how mangrove-degradations, affect the source-sink behaviour of CH₄; the pathways of CH₄, S and N were studied through whole-genome metagenomic approach. Soil samples were collected from degraded and undisturbed mangrove systems in Sundarban, India. Structural and functional microbial diversities (KEGG pathways) of CH₄, S and N metabolism were analysed and correlated with labile carbon pools and physico-chemical properties of soil. Overall, the acetoclastic pathway of methanogenesis was dominant. However, the relative proportion of conversion of CO₂ to CH₄ was more in degraded mangroves. Methane oxidation was higher in undisturbed mangroves and the serine pathway was dominant. After serine, the ribulose monophosphate pathway of CH₄ oxidation was dominant in degraded mangrove, while the xylulose monophosphate pathway was dominant in undisturbed site as it is more tolerant to salinity and higher pH. The assimilatory pathway (AMP) of S-metabolism was dominant in both systems. But in AMP pathway, adenosine triphosphate sulfurylase enzyme reads were higher in degraded mangrove, while NADPH-sulfite reductase abundance was higher in undisturbed mangrove due to higher salinity, and pH. In N-metabolism, the denitrification pathway was predominant in degraded sites, whereas the dissimilatory nitrate reduction pathway was dominant in undisturbed mangroves. The relative ratios of sulphur reducing bacteria (SRB): methanogens were higher in degraded mangrove; however, methanotrophs:methanogens was higher in undisturbed mangrove indicated lower source and greater sink capacity of CH₄ in the system. Microbial manipulation in mangrove-rhizosphere for regulating major energy metabolic pathways of methane could open-up a new window of climate change mitigation in coastal wetlands.

Comparison of methane metabolism in the rhizomicrobiomes of wild and related cultivated rice accessions reveals a strong impact of crop domestication

Microbial communities from rhizosphere (rhizomicrobiomes) have been significantly impacted by domestication as evidenced by a comparison of the rhizomicrobiomes of wild and related cultivated rice accessions. While there have been many published studies focusing on the structure of the rhizomicrobiome, studies comparing the functional traits of the microbial communities in the rhizospheres of wild rice and cultivated rice accessions are not yet available. In this study, we used metagenomic data from experimental rice plots to analyze the potential functional traits of the microbial communities in the rhizospheres of wild rice accessions originated from Africa and Asia in comparison with their related cultivated rice accessions. The functional potential of rhizosphere microbial communities involved in alanine, aspartate and glutamate metabolism, methane metabolism, carbon fixation pathways, citrate cycle (TCA cycle), pyruvate metabolism and lipopolysaccharide biosynthesis pathways were found to be enriched in the rhizomicrobiomes of wild rice accessions. Notably, methane metabolism in the rhizomicrobiomes of wild and cultivated rice accessions clearly differed. Key enzymes involved in methane production and utilization were overrepresented in the rhizomicrobiome samples obtained from wild rice accessions, suggesting that the rhizomicrobiomes of wild rice maintain a different ecological balance for methane production and utilization compared with those of the related cultivated rice accessions. A novel assessment of the impact of rice domestication on the primary metabolic pathways associated with microbial taxa in the rhizomicrobiomes was performed. Results indicated a strong impact of rice domestication on methane metabolism; a process that represents a critical function of the rhizosphere microbial community of rice. The findings of this study provide important information for future breeding of rice varieties with reduced methane emission during cultivation for sustainable agriculture.

Mitigation of yield-scaled greenhouse gas emissions from irrigated rice through Azolla, Blue-green algae, and plant growth-promoting bacteria

Irrigated transplanted flooded rice is a major source of methane (CH4) emission. We carried out experiments for 2 years in irrigated flooded rice to study if interventions like methane-utilizing bacteria, Blue-green algae (BGA), and Azolla could mitigate the emission of CH4 and nitrous oxide (N2O) and lower the yield-scaled global warming potential (GWP). The experiment included nine treatments: T1 (120 kg N ha-1 urea), T2 (90 kg N ha-1 urea + 30 kg N ha-1 fresh Azolla), T3 (90 kg N ha-1 urea + 30 kg N ha-1 Blue-green algae (BGA), T4 (60 kg N ha-1 urea + 30 kg N ha-1 BGA + 30 kg N ha-1 Azolla, T5 (120 kg N ha-1 urea + Hyphomicrobium facile MaAL69), T6 (120 kg N ha-1 by urea + Burkholderia vietnamiensis AAAr40), T7 (120 kg N ha-1 by urea + Methylobacteruim oryzae MNL7), T8 (120 kg N ha-1 urea + combination of Burkholderia AAAr40, Hyphomicrobium facile MaAL69, Methylobacteruim oryzae MNL7), and T9 (no N fertilizer). Maximum decrease in cumulative CH4 emission was observed with the application of Methylobacteruim oryzae MNL7 in T7 (19.9%), followed by Azolla + BGA in T4 (13.2%) as compared to T1 control. N2O emissions were not significantly affected by the application of CH4-oxidizing bacteria. However, significantly lower (P<0.01) cumulative N2O emissions was observed in T4 (40.7%) among the fertilized treatments. Highest yields were observed in Azolla treatment T2 with 25% less urea N application. The reduction in yield-scaled GWP was at par in T4 (Azolla and BGA) and T7 (Methylobacteruim oryzae MNL7) treatments and reduced by 27.4% and 15.2% in T4 and T7, respectively, as compared to the T1 (control). K-means clustering analysis showed that the application of Methylobacteruim oryzae MNL7, Azolla, and Azolla + BGA can be an effective mitigation option to reduce the global warming potential while increasing the yield.

Source or sink? A study on the methane flux from mangroves stems in Zhangjiang estuary, southeast coast of China

Mangrove ecosystems are an important component of "blue carbon". However, it is not clear whether the stems play roles in the CH₄ budget of mangrove ecosystems. This study investigated the CH₄ emission from mangrove stems and its potential driving factors. We set up six sample plots in the Zhangjiang Estuary National Mangrove Nature Reserve, where Kandelia obovata, Avicennia marina and Aegiceras corniculata are the main mangrove tree species. Soil properties such as total carbon content, redox potential and salinity were determined in each plot. The dynamic chamber method was used to measure mangrove stems and soil CH₄ fluxes. Combined field survey results with Principal Component Analysis (PCA) of soil properties, we divided the six plots into two sites (S1 and S2) to perform statistical analyses of stem CH₄ fluxes. Then the CH₄ fluxes from mangrove tree stems and soil were further scaled up to the ecosystem level through the mapping model. Under different backgrounds of soil properties, salinity and microbial biomass carbon were the main factors modified soil CH₄ fluxes in the two sites, and further affected the stem CH₄ fluxes of mangroves. The soil of both sites are sources of CH₄, and the soil CH₄ emission of S2 was about twice higher than that of S1. Results of upscaling model showed that mangrove stems in S1 were CH₄ sinks with -105.65 g d^-1. But stems in S2 were CH₄ sources around 1448.24 g d^-1. Taken together, our results suggested that CH₄ emission from mangrove soils closely depends on soils properties. And mangrove stems were found to act as both CH₄ sources and CH₄ sinks depend on soil CH₄ production. Therefore, when calculating the CH₄ budget of the mangrove ecosystem, the contribution of mangrove plant stems cannot be ignored.

Greenhouse gas emission from rice fields: a review from Indian context

Agricultural soil acts as a source and sink of important greenhouse gases (GHGs) like methane (CH4), nitrous oxide (N2O), and carbon dioxide (CO2). Rice paddies have been a major concern to scientific community, because they produce the threatening and long-lasting GHGs mainly CH4 and N2O. Around 30% and 11% of global agricultural CH4 and N2O, respectively, emitted from rice fields. Thus, it is urgent to concurrently quantify the fluxes of CH4 and N2O to improve understanding of both the gases from rice fields and to develop mitigation strategies for upcoming climate change reduction. An effort is being made in this review to discuss exclusively the emission of CH4 and N2O under normal and controlled conditions in different locations of India and also addresses the current synthesis of available data on how field and crop management activities influence CH4 and N2O emissions in rice fields. Making changes to conventional crop management regimes could have a significant impact on reducing GHG emissions from rice field. Environmental and agricultural factors related to soil could be easily altered by management practices. So, knowing the mechanism of CH4 and N2O production and release in the rice field and factors controlling the emissions is fundamental to develop well-organized strategies to reduce emissions from rice cultivated soil. This will help the regulatory bodies or policy makers to formulate adequate policies for agricultural farmers to refine the GHG emissions as well as minimize the global climate change.

Microbial Communities in Methane Cycle: Modern Molecular Methods Gain Insights into Their Global Ecology

The role of methane as a greenhouse gas in the concept of global climate changes is well known. Methanogens and methanotrophs are two microbial groups which contribute to the biogeochemical methane cycle in soil, so that the total emission of CH4 is the balance between its production and oxidation by microbial communities. Traditional identification techniques, such as selective enrichment and pure-culture isolation, have been used for a long time to study diversity of methanogens and methanotrophs. However, these techniques are characterized by significant limitations, since only a relatively small fraction of the microbial community could be cultured. Modern molecular methods for quantitative analysis of the microbial community such as real-time PCR (Polymerase chain reaction), DNA fingerprints and methods based on high-throughput sequencing together with different “omics” techniques overcome the limitations imposed by culture-dependent approaches and provide new insights into the diversity and ecology of microbial communities in the methane cycle. Here, we review available knowledge concerning the abundances, composition, and activity of methanogenic and methanotrophic communities in a wide range of natural and anthropogenic environments. We suggest that incorporation of microbial data could fill the existing microbiological gaps in methane flux modeling, and significantly increase the predictive power of models for different environments.

Industrial wastes: Fly ash, steel slag and phosphogypsum- potential candidates to mitigate greenhouse gas emissions from paddy fields

Waste management and global warming are the two challenging issues of the present global scenario. Increased human population has set the platform for rapid industrialization and modern agriculture. The industries such as energy, steel, and fertilizers play a significant role in improving the social, and economic status of human beings. The industrial production of energy (that involves combustion of coal), production of steel items and diammonium ammonium fertilizer generate a huge amount of wastes such as fly ash (FA), steel slag (SS) and phosphogypsum (PG), respectively. Inappropriate dumping of any kind of waste poses a threat to the environment, therefore, scientific management of waste is required to reduce associated environmental risks. These wastes i.e. SS, FA, and PG being rich sources of oxides of calcium (CaO), silicon (SiO₂), iron (FeO), and aluminum (Al₂O₃), etc. may affect the release of greenhouse gases from the soil. The information associated with the application of FA, SS, and PG onto the paddy fields and their impacts on methane and nitrous oxide emissions are highly fragmented and scarce. The present review extensively and critically explores the available information with respect to the effective utilization of FA, SS, and PG in paddy cultivation, their potential to mitigate greenhouse gases emission and their associated mechanisms. The fine grid assessment of these waste management provides new insight into the next level research and future policy options for industries and farmers.

Mitigation of methane gas emission in rice by drip irrigation

Background: Rice farming faces major challenges, including water limitation, drought and climate change in the current scenario of agriculture. Among the innovative water-saving techniques, drip irrigation is a forerunner, with maximized water-saving potential, increased grain yield and methane mitigation.

Methods: A field experiment was conducted comprising four different drip irrigation practices: (i) sub-surface drip irrigation (SDI) with 1.0 litre per hour (lph) discharge rate emitters (DRE) (SDI+1.0 lph DRE) (ii) SDI+0.6 lph DRE, (iii) surface drip irrigation (DI) with 1.0 lph discharge rate emitters (DI+1.0 lph DRE), (iv) DI+0.6 lph DRE and were compared with (v) a conventional flood aerobic irrigation (considered conventional).

Results: The estimated grain yield of rice was found to be 23.5%, 20.3%, and 15.1% higher under SDI+1.0 lph DRE, SDI+0.6 lph DRE and DI+1.0 lph DRE practices, respectively, than the conventional method. A water saving of 23.3% was also observed for all drip practices compared with conventional practices. Seasonal methane emission flux declined 78.0% in the drip methods over the conventional irrigation: better mitigation than previously reported values (alternate wetting and drying (47.5%) and system of rice intensification (29.0%) practices). Continuous soil aeration and enhanced soil methanotrophs (P<0.05) limit the peak methane emission in rice during the flowering phase in drip irrigation, which is reflected in the methane emission flux values. Consequently, the equivalent CO ₂ (CO ₂-eq) emissions and yield-scaled CO ₂ eq-emission were found to be significantly lower in SDI (43.8% and 49.5%, respectively), and DI (25.1% and 26.7%, respectively) methods as compared with the conventional that ensures better methane mitigation and future climate-smart rice production systems.

Conclusions: Drip irrigation could reduce the cumulative methane emission in aerobically grown rice. SDI + 1.0 lph DRE practice can be applied in areas with inadequate water availability and effective in reducing the CO ₂-eq emission with better yield than conventional.