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Hopper SE, Weiss D, Mikush N, Jiang B, Spronck B, Cavinato C, Humphrey JD, Figueroa CA. Central Artery Hemodynamics in Angiotensin II-Induced Hypertension and Effects of Anesthesia. Ann Biomed Eng 2024; 52:1051-1066. [PMID: 38383871 DOI: 10.1007/s10439-024-03440-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/22/2023] [Accepted: 12/30/2023] [Indexed: 02/23/2024]
Abstract
Systemic hypertension is a strong risk factor for cardiovascular, neurovascular, and renovascular diseases. Central artery stiffness is both an initiator and indicator of hypertension, thus revealing a critical relationship between the wall mechanics and hemodynamics. Mice have emerged as a critical animal model for studying effects of hypertension and much has been learned. Regardless of the specific mouse model, data on changes in cardiac function and hemodynamics are necessarily measured under anesthesia. Here, we present a new experimental-computational workflow to estimate awake cardiovascular conditions from anesthetized data, which was then used to quantify effects of chronic angiotensin II-induced hypertension relative to normotension in wild-type mice. We found that isoflurane anesthesia had a greater impact on depressing hemodynamics in angiotensin II-infused mice than in controls, which led to unexpected results when comparing anesthetized results between the two groups of mice. Through comparison of the awake simulations, however, in vivo relevant effects of angiotensin II-infusion on global and regional vascular structure, properties, and hemodynamics were found to be qualitatively consistent with expectations. Specifically, we found an increased in vivo vascular stiffness in the descending thoracic aorta and suprarenal abdominal aorta, leading to increases in pulse pressure in the distal aorta. These insights allow characterization of the impact of regionally varying vascular remodeling on hemodynamics and mouse-to-mouse variations due to induced hypertension.
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Affiliation(s)
- S E Hopper
- Department of Biomedical Engineering, University of Michigan, Ann Arbor, MI, USA
| | - D Weiss
- Department of Biomedical Engineering, Yale University, New Haven, CT, USA
| | - N Mikush
- Translational Research Imaging Center, Yale School of Medicine, New Haven, CT, USA
| | - B Jiang
- Department of Thyroid and Vascular Surgery, 1st Hospital of China Medical University, Shen Yang, China
| | - B Spronck
- Department of Biomedical Engineering, Maastricht University, Maastricht, The Netherlands
| | - C Cavinato
- LMGC, Universite' Montpellier, CNRS, Montpellier, France
| | - J D Humphrey
- Department of Biomedical Engineering, Yale University, New Haven, CT, USA.
| | - C A Figueroa
- Department of Biomedical Engineering, University of Michigan, Ann Arbor, MI, USA
- Department of Surgery, University of Michigan, Ann Arbor, MI, USA
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Antunes VG, Jimenez MJM, Cemin F, Figueroa CA, Alvarez F. Comparative Passivation of Si(100) by H 2 and D 2 Atmospheres under Simultaneous Xe + Bombardment: An X-ray Photoelectron Spectroscopy Analysis. Langmuir 2024; 40:4824-4830. [PMID: 38381859 DOI: 10.1021/acs.langmuir.3c03723] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/23/2024]
Abstract
This study presents a comparison of H2 and D2 passivation on Si(100) under simultaneous Xe+ ion bombardment. The impact of Xe+ ions causes significant damage to the substrate surface, leading to an increase in H2 (D2) retention as Si-H (Si-D) bonds. The ion bombardment conditions are precisely controlled using a Kaufman ion gun. The atomic concentrations on the surface of the sample were investigated by quasi-in situ X-ray photoelectron spectroscopy. A simple methodology is employed to estimate the H (D) chemical concentration and the cover ratio of the sample, with regard to the oxygen concentration through residual water chemisorption present in the vacuum vessel. Differences in passivation are expected when using H2 or D2 atmospheres because their retained scission energies and physisorption properties differ. The results indicate an increase of the sticking coefficient for D2 and H2 under the ion bombardment. It is also found that the flux of H2 (D2) impinging on the surface contributes to play an important role in the whole process. Finally, a model is proposed to describe the phenomenon of the passivation of Si under Xe+ ion bombardment in the presence of H2 (D2).
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Affiliation(s)
- V G Antunes
- Université Grenoble Alpes, CNRS, CEA/LETI Minatec, Grenoble INP, LTM, F-38054 Grenoble, France
- Instituto de Física Gleb Wataghin (IFGW), Universidade Estadual de Campinas, Campinas, São Paulo 13083-970, Brazil
| | - M J M Jimenez
- Instituto de Física Gleb Wataghin (IFGW), Universidade Estadual de Campinas, Campinas, São Paulo 13083-970, Brazil
| | - F Cemin
- Instituto de Física Gleb Wataghin (IFGW), Universidade Estadual de Campinas, Campinas, São Paulo 13083-970, Brazil
| | - C A Figueroa
- Programa de Pós Graduação em Ciência e Engenharia de Materiais (PGMAT), Universidade de Caxias do Sul, Caxias do Sul, Rio Grande do Sul 95070-560, Brazil
| | - F Alvarez
- Instituto de Física Gleb Wataghin (IFGW), Universidade Estadual de Campinas, Campinas, São Paulo 13083-970, Brazil
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Figueroa CA, Linhart CL, Dearie C, Fusimalohi LE, Kupu S, Morrell SL, Taylor RJ. Effects of inappropriate cause-of-death certification on mortality from cardiovascular disease and diabetes mellitus in Tonga. BMC Public Health 2023; 23:2381. [PMID: 38041110 PMCID: PMC10691179 DOI: 10.1186/s12889-023-17294-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/07/2023] [Accepted: 11/22/2023] [Indexed: 12/03/2023] Open
Abstract
BACKGROUND Cardiovascular disease (CVD) and diabetes mellitus are major health issues in Tonga and other Pacific countries, although mortality levels and trends are unclear. We assess the impacts of cause-of-death certification on coding of CVD and diabetes as underlying causes of death (UCoD). METHODS Tongan records containing cause-of-death data (2001-2018), including medical certificates of cause-of-death (MCCD), had UCoD assigned according to International Classification of Diseases 10th revision (ICD-10) coding rules. Deaths without recorded cause were included to ascertain total mortality. Diabetes and hypertension causes were reallocated from Part 1 of the MCCD (direct cause) to Part 2 (contributory cause) if potentially fatal complications were not recorded, and an alternative UCoD was assigned. Proportional mortality by cause based on the alternative UCoD were applied to total deaths then mortality rates calculated by age and sex using census/intercensal population estimates. CVD and diabetes mortality rates for unaltered and alternative UCoD were compared using Poisson regression. RESULTS Over 2001-18, in ages 35-59 years, alternative CVD mortality was higher than unaltered CVD mortality in men (p = 0.043) and women (p = 0.15); for 2010-18, alternative versus unaltered measures in men were 3.3/103 (95%CI: 3.0-3.7/103) versus 2.9/103 (95%CI: 2.6-3.2/103), and in women were 1.1/103 (95%CI: 0.9-1.3/103) versus 0.9/103 (95%CI: 0.8-1.1/103). Conversely, alternative diabetes mortality rates were significantly lower than the unaltered rates over 2001-18 in men (p < 0.0001) and women (p = 0.013); for 2010-18, these measures in men were 1.3/103 (95%CI: 1.1-1.5/103) versus 1.9/103 (95%CI: 1.6-2.2/103), and in women were 1.4/103 (95%CI: 1.2-1.7/103) versus 1.7/103 (95%CI: 1.5-2.0/103). Diabetes mortality rates increased significantly over 2001-18 in men (unaltered: p < 0.0001; alternative: p = 0.0007) and increased overall in women (unaltered: p = 0.0015; alternative: p = 0.014). CONCLUSIONS Diabetes reporting in Part 1 of the MCCD, without potentially fatal diabetes complications, has led to over-estimation of diabetes, and under-estimation of CVD, as UCoD in Tonga. This indicates the importance of controlling various modifiable risks for atherosclerotic CVD (including stroke) including hypertension, tobacco use, and saturated fat intake, besides obesity and diabetes. Accurate certification of diabetes as a direct cause of death (Part 1) or contributory factor (Part 2) is needed to ensure that valid UCoD are assigned. Examination of multiple cause-of-death data can improve understanding of the underlying causes of premature mortality to better inform health planning.
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Affiliation(s)
- Carah A Figueroa
- Statistics for Development Division, Pacific Community, Nouméa, New Caledonia.
| | - Christine L Linhart
- School of Population Health, University of New South Wales, UNSW, Sydney, Australia
| | - Catherine Dearie
- School of Population Health, University of New South Wales, UNSW, Sydney, Australia
| | | | | | - Stephen L Morrell
- School of Population Health, University of New South Wales, UNSW, Sydney, Australia
| | - Richard J Taylor
- School of Population Health, University of New South Wales, UNSW, Sydney, Australia
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Ferdian E, Marlevi D, Schollenberger J, Aristova M, Edelman ER, Schnell S, Figueroa CA, Nordsletten DA, Young AA. Cerebrovascular super-resolution 4D Flow MRI - Sequential combination of resolution enhancement by deep learning and physics-informed image processing to non-invasively quantify intracranial velocity, flow, and relative pressure. Med Image Anal 2023; 88:102831. [PMID: 37244143 DOI: 10.1016/j.media.2023.102831] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/09/2021] [Revised: 04/04/2023] [Accepted: 04/20/2023] [Indexed: 05/29/2023]
Abstract
The development of cerebrovascular disease is tightly coupled to regional changes in intracranial flow and relative pressure. Image-based assessment using phase contrast magnetic resonance imaging has particular promise for non-invasive full-field mapping of cerebrovascular hemodynamics. However, estimations are complicated by the narrow and tortuous intracranial vasculature, with accurate image-based quantification directly dependent on sufficient spatial resolution. Further, extended scan times are required for high-resolution acquisitions, and most clinical acquisitions are performed at comparably low resolution (>1 mm) where biases have been observed with regard to the quantification of both flow and relative pressure. The aim of our study was to develop an approach for quantitative intracranial super-resolution 4D Flow MRI, with effective resolution enhancement achieved by a dedicated deep residual network, and with accurate quantification of functional relative pressures achieved by subsequent physics-informed image processing. To achieve this, our two-step approach was trained and validated in a patient-specific in-silico cohort, showing good accuracy in estimating velocity (relative error: 15.0 ± 0.1%, mean absolute error (MAE): 0.07 ± 0.06 m/s, and cosine similarity: 0.99 ± 0.06 at peak velocity) and flow (relative error: 6.6 ± 4.7%, root mean square error (RMSE): 0.56 mL/s at peak flow), and with the coupled physics-informed image analysis allowing for maintained recovery of functional relative pressure throughout the circle of Willis (relative error: 11.0 ± 7.3%, RMSE: 0.3 ± 0.2 mmHg). Furthermore, the quantitative super-resolution approach is applied to an in-vivo volunteer cohort, effectively generating intracranial flow images at <0.5 mm resolution and showing reduced low-resolution bias in relative pressure estimation. Our work thus presents a promising two-step approach to non-invasively quantify cerebrovascular hemodynamics, being applicable to dedicated clinical cohorts in the future.
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Affiliation(s)
- E Ferdian
- University of Auckland, Auckland 1142 New Zealand
| | - D Marlevi
- Massachusetts Institute of Technology, Cambridge, MA 02139 USA
| | | | - M Aristova
- Northwestern University, Chicago, IL 60611, USA
| | - E R Edelman
- Massachusetts Institute of Technology, Cambridge, MA 02139 USA
| | - S Schnell
- Northwestern University, Chicago, IL 60611, USA; University of Greifswald, Greifswald 17489, Germany
| | - C A Figueroa
- University of Michigan, Ann Arbor, MI 48109, USA
| | - D A Nordsletten
- University of Michigan, Ann Arbor, MI 48109, USA; King's College London, London, SE1 7EH, UK
| | - A A Young
- University of Auckland, Auckland 1142 New Zealand; King's College London, London, SE1 7EH, UK
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Kim T, van Bakel PAJ, Nama N, Burris N, Patel HJ, Williams DM, Figueroa CA. A Computational Study of Dynamic Obstruction in Type B Aortic Dissection. J Biomech Eng 2023; 145:031008. [PMID: 36459144 PMCID: PMC10854260 DOI: 10.1115/1.4056355] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2022] [Revised: 11/18/2022] [Accepted: 11/21/2022] [Indexed: 12/05/2022]
Abstract
A serious complication in aortic dissection is dynamic obstruction of the true lumen (TL). Dynamic obstruction results in malperfusion, a blockage of blood flow to a vital organ. Clinical data reveal that increases in central blood pressure promote dynamic obstruction. However, the mechanisms by which high pressures result in TL collapse are underexplored and poorly understood. Here, we developed a computational model to investigate biomechanical and hemodynamical factors involved in Dynamic obstruction. We hypothesize that relatively small pressure gradient between TL and false lumen (FL) are sufficient to displace the flap and induce obstruction. An idealized fluid-structure interaction model of type B aortic dissection was created. Simulations were performed under mean cardiac output while inducing dynamic changes in blood pressure by altering FL outflow resistance. As FL resistance increased, central aortic pressure increased from 95.7 to 115.3 mmHg. Concurrent with blood pressure increase, flap motion was observed, resulting in TL collapse, consistent with clinical findings. The maximum pressure gradient between TL and FL over the course of the dynamic obstruction was 4.5 mmHg, consistent with our hypothesis. Furthermore, the final stage of dynamic obstruction was very sudden in nature, occurring over a short time (<1 s) in our simulation, consistent with the clinical understanding of this dramatic event. Simulations also revealed sudden drops in flow and pressure in the TL in response to the flap motion, consistent with first stages of malperfusion. To our knowledge, this study represents the first computational analysis of potential mechanisms driving dynamic obstruction in aortic dissection.
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Affiliation(s)
- T Kim
- Department of Biomedical Engineering, University of Michigan, Ann Arbor, MI 48105
| | - P A J van Bakel
- Department of Cardiac Surgery, University of Michigan, Ann Arbor, MI 48105
| | - N Nama
- Department of Mechanical and Materials Engineering, University of Nebraska-Lincoln, Lincoln, NE 68588
| | - N Burris
- Department of Radiology, University of Michigan, Ann Arbor, MI 48105
| | - H J Patel
- Department of Cardiac Surgery, University of Michigan, Ann Arbor, MI 48105
| | - D M Williams
- Department of Radiology, University of Michigan, Ann Arbor, MI 48105
| | - C A Figueroa
- Department of Biomedical Engineering, University of Michigan, Ann Arbor, MI 48105; Department of Surgery, University of Michigan, Ann Arbor, MI 48105
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Geugies H, Opmeer EM, Marsman JBC, Figueroa CA, van Tol MJ, Schmaal L, van der Wee NJA, Aleman A, Penninx BWJH, Veltman DJ, Schoevers RA, Ruhé HG. Decreased functional connectivity of the insula within the salience network as an indicator for prospective insufficient response to antidepressants. Neuroimage Clin 2019; 24:102064. [PMID: 31795046 PMCID: PMC6883326 DOI: 10.1016/j.nicl.2019.102064] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/31/2018] [Revised: 10/01/2019] [Accepted: 11/03/2019] [Indexed: 01/04/2023]
Abstract
Connectivity analyses complemented with a metric exploring switching in brain activity. Lower insula-salience connectivity predicts insufficient antidepressant response. This same insula region is activated less when switching from task to a rest. This could be a potential biomarkers for predicting future antidepressant response.
Insufficient response to treatment is the main cause of prolonged suffering from major depressive disorder (MDD). Early identification of insufficient response could result in faster and more targeted treatment strategies to reduce suffering. We therefore explored whether baseline alterations within and between resting state functional connectivity networks could serve as markers of insufficient response to antidepressant treatment in two years of follow-up. We selected MDD patients (N = 17) from the NEtherlands Study of Depression and Anxiety (NESDA), who received ≥ two antidepressants, indicative for insufficient response, during the two year follow-up, a group of MDD patients who received only one antidepressant (N = 32) and a healthy control group (N = 19) matched on clinical characteristics and demographics. An independent component analysis (ICA) of baseline resting-state scans was conducted after which functional connectivity within the components was compared between groups. We observed lower connectivity of the right insula within the salience network in the group with ≥ two antidepressants compared to the group with one antidepressant. No difference in connectivity was found between the patient groups and healthy control group. Given the suggested role of the right insula in switching between task-positive mode (activation during attention-demanding tasks) and task-negative mode (activation during the absence of any task), we explored whether right insula activation differed during switching between these two modes. We observed that in the ≥2 antidepressant group, the right insula was less active compared to the group with one antidepressant, when switching from task-positive to task-negative mode than the other way around. These findings imply that lower right insula connectivity within the salience network may serve as an indicator for prospective insufficient response to antidepressants. This result, supplemented by the diminished insula activation when switching between task and rest related networks, could indicate an underlying mechanism that, if not sufficiently targeted by current antidepressants, could lead to insufficient response. When replicated, these findings may contribute to the identification of biomarkers for early detection of insufficient response.
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Affiliation(s)
- H Geugies
- University Medical Center Groningen, University Center for Psychiatry, Mood and Anxiety Disorders, University of Groningen, Groningen, the Netherlands; University Medical Center Groningen, Department of Neuroscience, Cognitive Neuroscience Center, University of Groningen, Groningen, the Netherlands.
| | - E M Opmeer
- University Medical Center Groningen, Department of Neuroscience, Cognitive Neuroscience Center, University of Groningen, Groningen, the Netherlands
| | - J B C Marsman
- University Medical Center Groningen, Department of Neuroscience, Cognitive Neuroscience Center, University of Groningen, Groningen, the Netherlands
| | - C A Figueroa
- Department of Psychiatry, Amsterdam UMC, Locatie AMC, University of Amsterdam, Amsterdam, the Netherlands
| | - M J van Tol
- University Medical Center Groningen, Department of Neuroscience, Cognitive Neuroscience Center, University of Groningen, Groningen, the Netherlands
| | - L Schmaal
- Department of Psychiatry, Amsterdam UMC, Locatie VUmc, VU University Amsterdam, Amsterdam, the Netherlands; Orygen, The National Centre of Excellence in Youth Mental Health, Parkville, Australia; Centre for Youth Mental Health, The University of Melbourne, Melbourne, Australia
| | - N J A van der Wee
- Department of Psychiatry, Leiden University Medical Center, Leiden, the Netherlands; Leiden Institute for Brain and Cognition, Leiden University, Leiden, the Netherlands
| | - A Aleman
- University Medical Center Groningen, Department of Neuroscience, Cognitive Neuroscience Center, University of Groningen, Groningen, the Netherlands; Department of Psychology, University of Groningen, Groningen, the Netherlands
| | - B W J H Penninx
- Department of Psychiatry, Amsterdam UMC, Locatie VUmc, VU University Amsterdam, Amsterdam, the Netherlands
| | - D J Veltman
- Department of Psychiatry, Amsterdam UMC, Locatie VUmc, VU University Amsterdam, Amsterdam, the Netherlands
| | - R A Schoevers
- University Medical Center Groningen, University Center for Psychiatry, Mood and Anxiety Disorders, University of Groningen, Groningen, the Netherlands; Interdisciplinary Center Psychopathology and Emotion regulation (ICPE), University Medical Center Groningen, University of Groningen, Groningen, the Netherlands; University of Groningen, Research School of Behavioural and Cognitive Neurosciences (BCN), Groningen, the Netherlands
| | - H G Ruhé
- University Medical Center Groningen, University Center for Psychiatry, Mood and Anxiety Disorders, University of Groningen, Groningen, the Netherlands; Department of Psychiatry, Amsterdam UMC, Locatie AMC, University of Amsterdam, Amsterdam, the Netherlands; Department of Psychiatry, Radboud University Medical Center, Nijmegen, the Netherlands.
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de Mello SRS, da Costa MEHM, Menezes CM, Boeira CD, Freire FL, Alvarez F, Figueroa CA. On the phonon dissipation contribution to nanoscale friction by direct contact. Sci Rep 2017; 7:3242. [PMID: 28607395 PMCID: PMC5468333 DOI: 10.1038/s41598-017-03046-8] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/26/2017] [Accepted: 04/19/2017] [Indexed: 11/09/2022] Open
Abstract
The friction phenomenon is a ubiquitous manifestation of nature. Models considering phononic, electronic, magnetic, and electrostatic interactions are invoked to explain the fundamental forces involved in the friction phenomenon. In order to establish the incidence of the phonon prompting at the nanoscale friction by direct contact, we study a diamond spherical dome sliding on carbon thin films containing different amount of deuterium and hydrogen. The friction coefficient decreases by substituting hydrogen by deuterium atoms. This result is consistent with an energy dissipation vibration local mechanism from a disordered distribution of bond terminators.
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Affiliation(s)
- S R Sales de Mello
- Centro de Ciências Exatas e da Tecnologia, Universidade de Caxias do Sul, Caxias do Sul-RS, 95070-560, Brazil
| | - M E H Maia da Costa
- Departamento de Física, Pontifícia Universidade Católica do Rio de Janeiro, Rio de Janeiro - RJ, 22453-900, Brazil
| | - C M Menezes
- Centro de Ciências Exatas e da Tecnologia, Universidade de Caxias do Sul, Caxias do Sul-RS, 95070-560, Brazil
| | - C D Boeira
- Centro de Ciências Exatas e da Tecnologia, Universidade de Caxias do Sul, Caxias do Sul-RS, 95070-560, Brazil
| | - F L Freire
- Departamento de Física, Pontifícia Universidade Católica do Rio de Janeiro, Rio de Janeiro - RJ, 22453-900, Brazil
| | - F Alvarez
- Instituto de Física "Gleb Wataghin", Universidade Estadual de Campinas, Campinas-SP, 13081-970, Brazil
| | - C A Figueroa
- Centro de Ciências Exatas e da Tecnologia, Universidade de Caxias do Sul, Caxias do Sul-RS, 95070-560, Brazil.
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Cemin F, Bim LT, Leidens LM, Morales M, Baumvol IJR, Alvarez F, Figueroa CA. Identification of the Chemical Bonding Prompting Adhesion of a-C:H Thin Films on Ferrous Alloy Intermediated by a SiCx:H Buffer Layer. ACS Appl Mater Interfaces 2015; 7:15909-15917. [PMID: 26135943 DOI: 10.1021/acsami.5b03554] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
Amorphous carbon (a-C) and several related materials (DLCs) may have ultralow friction coefficients that can be used for saving-energy applications. However, poor chemical bonding of a-C/DLC films on metallic alloys is expected, due to the stability of carbon-carbon bonds. Silicon-based intermediate layers are employed to enhance the adherence of a-C:H films on ferrous alloys, although the role of such buffer layers is not yet fully understood in chemical terms. The chemical bonding of a-C:H thin films on ferrous alloy intermediated by a nanometric SiCx:H buffer layer was analyzed by X-ray photoelectron spectroscopy (XPS). The chemical profile was inspected by glow discharge optical emission spectroscopy (GDOES), and the chemical structure was evaluated by Raman and Fourier transform infrared spectroscopy techniques. The nature of adhesion is discussed by analyzing the chemical bonding at the interfaces of the a-C:H/SiCx:H/ferrous alloy sandwich structure. The adhesion phenomenon is ascribed to specifically chemical bonding character at the buffer layer. Whereas carbon-carbon (C-C) and carbon-silicon (C-Si) bonds are formed at the outermost interface, the innermost interface is constituted mainly by silicon-iron (Si-Fe) bonds. The oxygen presence degrades the adhesion up to totally delaminate the a-C:H thin films. The SiCx:H deposition temperature determines the type of chemical bonding and the amount of oxygen contained in the buffer layer.
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Affiliation(s)
- F Cemin
- †Centro de Ciências Exatas e Tecnologia, Universidade de Caxias do Sul, 95070-560 Caxias do Sul, RS, Brazil
| | - L T Bim
- †Centro de Ciências Exatas e Tecnologia, Universidade de Caxias do Sul, 95070-560 Caxias do Sul, RS, Brazil
| | - L M Leidens
- †Centro de Ciências Exatas e Tecnologia, Universidade de Caxias do Sul, 95070-560 Caxias do Sul, RS, Brazil
| | - M Morales
- ‡Instituto de Física "Gleb Wataghin", Universidade Estadual de Campinas, 13083-970 Campinas, SP, Brazil
| | - I J R Baumvol
- §Instituto de Física, Universidade Federal do Rio Grande do Sul, 91509-970 Porto Alegre, RS, Brazil
| | - F Alvarez
- ‡Instituto de Física "Gleb Wataghin", Universidade Estadual de Campinas, 13083-970 Campinas, SP, Brazil
| | - C A Figueroa
- †Centro de Ciências Exatas e Tecnologia, Universidade de Caxias do Sul, 95070-560 Caxias do Sul, RS, Brazil
- ∥Plasmar Tecnologia Ltda., 95030-775 Caxias do Sul, RS, Brazil
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Romo E, Weinacker DF, Zepeda AB, Figueroa CA, Chavez-Crooker P, Farias JG. Bacterial consortium for copper extraction from sulphide ore consisting mainly of chalcopyrite. Braz J Microbiol 2013; 44:523-8. [PMID: 24294251 PMCID: PMC3833157 DOI: 10.1590/s1517-83822013005000043] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2012] [Accepted: 12/10/2012] [Indexed: 11/21/2022] Open
Abstract
The mining industry is looking forward for bacterial consortia for economic extraction of copper from low-grade ores. The main objective was to determine an optimal bacterial consortium from several bacterial strains to obtain copper from the leach of chalcopyrite. The major native bacterial species involved in the bioleaching of sulphide ore (Acidithiobacillus ferrooxidans, Acidithiobacillus thiooxidans, Leptospirillum ferrooxidans and Leptospirillum ferriphilum) were isolated and the assays were performed with individual bacteria and in combination with At. thiooxidans. In conclusion, it was found that the consortium integrated by At. ferrooxidans and At. thiooxidans removed 70% of copper in 35 days from the selected ore, showing significant differences with the other consortia, which removed only 35% of copper in 35 days. To validate the assays was done an escalation in columns, where the bacterial consortium achieved a higher percentage of copper extraction regarding to control.
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Affiliation(s)
- E Romo
- Departamento de Ingeniería Química, Facultad de Ingeniería, Ciencias y Administración, Universidad de La Frontera, Temuco, Chile
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Zepeda AB, Figueroa CA, Calaf GM, Farías JG. Male reproductive system and antioxidants in oxidative stress induced by hypobaric hypoxia. Andrologia 2012; 46:1-8. [PMID: 23127143 DOI: 10.1111/and.12039] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 09/18/2012] [Indexed: 11/30/2022] Open
Abstract
In Chile, due to the intensive activity developed in confining areas of the Andes Mountains ranging in altitude over 4000 asl, there has been an increasing intermittent movement of human resources to high altitude conditions. This unusual condition, defined as hypobaric hypoxia, affects notoriously in any living organism and there shows a series of physiological responses. Studies performed in rats under chronic hypobaric hypoxia and intermittent hypobaric hypoxia have registered changes in testicular morphology together with loss of spermatogenic cells in all stages of spermatogenic cycle. Furthermore, recent tests reinforced the existence of an oxidative metabolism in epididymis of rats subjected to hypobaric hypoxia due to the increase in the regulator enzyme expression of reactive oxygen species (ROS), This increase in the production of ROS induced a rise in apoptosis at germinal cell level, leading to a state of hypo-spermatogenesis that may jeopardise masculine fertility. Therefore, the eventual development of oxidative stress in spermatogenic cells and consequently the spermatozoids of workers subjected to high altitude, either chronic or intermittent, turns out to be critical when it poses as an imminent risk to the viability and quality of the reproductive cells of workers subjected to intermittent hypobaric hypoxia.
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Affiliation(s)
- A B Zepeda
- Departamento de Ingeniería Química, Facultad de Ingeniería, Ciencias y Administración, Universidad de La Frontera, Temuco, Chile
| | - C A Figueroa
- Departamento de Ingeniería Química, Facultad de Ingeniería, Ciencias y Administración, Universidad de La Frontera, Temuco, Chile
| | - G M Calaf
- Instituto de Alta Investigación, Universidad de Tarapacá, Arica, Chile.,Center for Radiological Research, Columbia University Medical Center, New York, NY, USA
| | - J G Farías
- Departamento de Ingeniería Química, Facultad de Ingeniería, Ciencias y Administración, Universidad de La Frontera, Temuco, Chile
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11
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Moireau P, Bertoglio C, Xiao N, Figueroa CA, Taylor CA, Chapelle D, Gerbeau JF. Sequential identification of boundary support parameters in a fluid-structure vascular model using patient image data. Biomech Model Mechanobiol 2012; 12:475-96. [PMID: 22802016 DOI: 10.1007/s10237-012-0418-3] [Citation(s) in RCA: 49] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/16/2012] [Accepted: 06/23/2012] [Indexed: 10/28/2022]
Abstract
Viscoelastic support has been previously established as a valuable modeling ingredient to represent the effect of surrounding tissues and organs in a fluid-structure vascular model. In this paper, we propose a complete methodological chain for the identification of the corresponding boundary support parameters, using patient image data. We consider distance maps of model to image contours as the discrepancy driving the data assimilation approach, which then relies on a combination of (1) state estimation based on the so-called SDF filtering method, designed within the realm of Luenberger observers and well adapted to handling measurements provided by image sequences, and (2) parameter estimation based on a reduced-order UKF filtering method which has no need for tangent operator computations and features natural parallelism to a high degree. Implementation issues are discussed, and we show that the resulting computational effectiveness of the complete estimation chain is comparable to that of a direct simulation. Furthermore, we demonstrate the use of this framework in a realistic application case involving hemodynamics in the thoracic aorta. The estimation of the boundary support parameters proves successful, in particular in that direct modeling simulations based on the estimated parameters are more accurate than with a previous manual expert calibration. This paves the way for complete patient-specific fluid-structure vascular modeling in which all types of available measurements could be used to estimate additional uncertain parameters of biophysical and clinical relevance.
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Affiliation(s)
- P Moireau
- Inria, Rocquencourt, B.P.105, 78153, Le Chesnay, France.
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12
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Moireau P, Xiao N, Astorino M, Figueroa CA, Chapelle D, Taylor CA, Gerbeau JF. External tissue support and fluid-structure simulation in blood flows. Biomech Model Mechanobiol 2012. [PMID: 21308393 DOI: 10.1007/s10237-0110289-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/07/2023]
Abstract
The objective of this work is to address the formulation of an adequate model of the external tissue environment when studying a portion of the arterial tree with fluid-structure interaction. Whereas much work has already been accomplished concerning flow and pressure boundary conditions associated with truncations in the fluid domain, very few studies take into account the tissues surrounding the region of interest to derive adequate boundary conditions for the solid domain. In this paper, we propose to model the effect of external tissues by introducing viscoelastic support conditions along the artery wall, with two-possibly distributed-parameters that can be adjusted to mimic the response of various physiological tissues. In order to illustrate the versatility and effectiveness of our approach, we apply this strategy to perform patient-specific modeling of thoracic aortae based on clinical data, in two different cases and using a distinct fluid-structure interaction methodology for each, namely an Arbitrary Lagrangian-Eulerian (ALE) approach with prescribed inlet motion in the first case and the coupled momentum method in the second case. In both cases, the resulting simulations are quantitatively assessed by detailed comparisons with dynamic image sequences, and the model results are shown to be in very good adequacy with the data.
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Affiliation(s)
- P Moireau
- INRIA Paris-Rocquencourt, B.P.105, 78153, Le Chesnay, France.
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13
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Kim HJ, Vignon-Clementel IE, Coogan JS, Figueroa CA, Jansen KE, Taylor CA. Patient-specific modeling of blood flow and pressure in human coronary arteries. Ann Biomed Eng 2010; 38:3195-209. [PMID: 20559732 DOI: 10.1007/s10439-010-0083-6] [Citation(s) in RCA: 346] [Impact Index Per Article: 24.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2009] [Accepted: 05/20/2010] [Indexed: 11/27/2022]
Abstract
Coronary flow is different from the flow in other parts of the arterial system because it is influenced by the contraction and relaxation of the heart. To model coronary flow realistically, the compressive force of the heart acting on the coronary vessels needs to be included. In this study, we developed a method that predicts coronary flow and pressure of three-dimensional epicardial coronary arteries by considering models of the heart and arterial system and the interactions between the two models. For each coronary outlet, a lumped parameter coronary vascular bed model was assigned to represent the impedance of the downstream coronary vascular networks absent in the computational domain. The intramyocardial pressure was represented with either the left or right ventricular pressure depending on the location of the coronary arteries. The left and right ventricular pressure were solved from the lumped parameter heart models coupled to a closed loop system comprising a three-dimensional model of the aorta, three-element Windkessel models of the rest of the systemic circulation and the pulmonary circulation, and lumped parameter models for the left and right sides of the heart. The computed coronary flow and pressure and the aortic flow and pressure waveforms were realistic as compared to literature data.
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Affiliation(s)
- H J Kim
- Aerospace Engineering Sciences, University of Colorado at Boulder, Boulder, CO 80309, USA
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14
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Kim HJ, Vignon-Clementel IE, Figueroa CA, LaDisa JF, Jansen KE, Feinstein JA, Taylor CA. On coupling a lumped parameter heart model and a three-dimensional finite element aorta model. Ann Biomed Eng 2009; 37:2153-69. [PMID: 19609676 DOI: 10.1007/s10439-009-9760-8] [Citation(s) in RCA: 177] [Impact Index Per Article: 11.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2008] [Accepted: 07/02/2009] [Indexed: 10/20/2022]
Abstract
Aortic flow and pressure result from the interactions between the heart and arterial system. In this work, we considered these interactions by utilizing a lumped parameter heart model as an inflow boundary condition for three-dimensional finite element simulations of aortic blood flow and vessel wall dynamics. The ventricular pressure-volume behavior of the lumped parameter heart model is approximated using a time varying elastance function scaled from a normalized elastance function. When the aortic valve is open, the coupled multidomain method is used to strongly couple the lumped parameter heart model and three-dimensional arterial models and compute ventricular volume, ventricular pressure, aortic flow, and aortic pressure. The shape of the velocity profiles of the inlet boundary and the outlet boundaries that experience retrograde flow are constrained to achieve a robust algorithm. When the aortic valve is closed, the inflow boundary condition is switched to a zero velocity Dirichlet condition. With this method, we obtain physiologically realistic aortic flow and pressure waveforms. We demonstrate this method in a patient-specific model of a normal human thoracic aorta under rest and exercise conditions and an aortic coarctation model under pre- and post-interventions.
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Affiliation(s)
- H J Kim
- Department of Mechanical Engineering, Stanford University, 18 Campus Drive, Stanford, CA 94305, USA
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15
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Paredez P, Figueroa CA, Zagonel LF, Reichert FR, Ribeiro CRM, Point S, Godon C, Minea TM, Alvarez F. Oriented carbon nanostructures containing nitrogen obtained by ion beam assisted deposition. J Nanosci Nanotechnol 2005; 5:188-91. [PMID: 15853135 DOI: 10.1166/jnn.2005.052] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/02/2023]
Abstract
In this paper, we report the deposition of graphite multilayer containing nitrogen covering nanometric nickel particles. In-situ photoelectron emission spectroscopy (XPS) reveals the presence of nitrogen in the carbon layer covering the nickel particles. The field emission properties of the structures are reported. Atomic force microscopy displays regular domelike structures. Raman spectroscopy shows the characteristic frequencies associated with graphite and disordered structures. High-resolution transmission electron microscopy confirms the presence of multiwall well-organized graphite layers covering the nickel particles. Disorder increases on increasing nitrogen content. The samples were prepared in-situ by depositing first a few atomic layers of nickel and subsequent islands formation by thermal annealing. Then, an argon ion beam bombards an ultrapure carbon target and simultaneously the growing film is assisted with a second low-energy nitrogen ion beam (ion beam assisted deposition).
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Affiliation(s)
- P Paredez
- Instituto de Física Gleb Wataghin, Universidade Estadual de Campinas, Unicamp 13083-970, Campinas, São Paulo, Brazil
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