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Chaffin JD, Barker KB, Bickman SR, Bratton JF, Bridgeman TB, Bhatia M, Buchholz SD, Bullerjahn GS, Johengen TH, Kang DW, Lewis GG, Lochhead MJ, Macdonald BM, Petrou CL, Platz M, Purcell H, Roser J, Seo Y, Siddiquee M, Snyder B, Taylor AT, Verhamme EM, Westrick JA. An assessment of a biosensor system for the quantification of microcystins in freshwater cyanobacterial blooms. Anal Biochem 2024; 687:115429. [PMID: 38113981 DOI: 10.1016/j.ab.2023.115429] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2023] [Revised: 11/29/2023] [Accepted: 12/11/2023] [Indexed: 12/21/2023]
Abstract
Microcystin-producing cyanobacterial blooms are a global issue threatening drinking water supplies and recreation on lakes and beaches. Direct measurement of microcystins is the only way to ensure waters have concentrations below guideline concentrations; however, analyzing water for microcystins takes several hours to days to obtain data. We tested LightDeck Diagnostics' bead beater cell lysis and two versions of the quantification system designed to give microcystin concentrations within 20 min and compared it to the standard freeze-thaw cycle lysis method and ELISA quantification. The bead beater lyser was only 30 % effective at extracting microcystins compared to freeze-thaw. When considering freeze-thaw samples analyzed in 2021, there was good agreement between ELISA and LightDeck version 2 (n = 152; R2 = 0.868), but the LightDeck slightly underestimated microcystins (slope of 0.862). However, we found poor relationships between LightDeck version 2 and ELISA in 2022 (n = 49, slopes 0.60 to 1.6; R2 < 0.6) and LightDeck version 1 (slope = 1.77 but also a high number of less than quantifiable concentrations). After the quantification issues are resolved, combining the LightDeck system with an already-proven rapid lysis method (such as microwaving) will allow beach managers and water treatment operators to make quicker, well-informed decisions.
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Affiliation(s)
- Justin D Chaffin
- F.T. Stone Laboratory and Ohio Sea Grant, The Ohio State University, Put in Bay, Ohio 43456, USA; Bowling Green State University, Bowling Green, Ohio 43403, USA.
| | | | - Sarah R Bickman
- LightDeck Diagnostics, Inc., 5603 Arapahoe Ave, Boulder, Colorado 80303, USA
| | - John F Bratton
- LimnoTech, Inc. 501 Avis Dr., Ann Arbor Michigan 48108, USA
| | | | - Mudit Bhatia
- Department of Civil and Environmental Engineering, University of Toledo, 3006 Nitschke Hall, Toledo, Ohio 43606, USA
| | - Seth D Buchholz
- Bowling Green State University, Bowling Green, Ohio 43403, USA
| | | | - Thomas H Johengen
- Cooperative Institute for Great Lakes Research, University of Michigan, Ann Arbor, Michigan 48109, USA
| | - Dae-Wook Kang
- Department of Civil and Environmental Engineering, University of Toledo, 3006 Nitschke Hall, Toledo, Ohio 43606, USA
| | - Gregory G Lewis
- LightDeck Diagnostics, Inc., 5603 Arapahoe Ave, Boulder, Colorado 80303, USA
| | - Michael J Lochhead
- LightDeck Diagnostics, Inc., 5603 Arapahoe Ave, Boulder, Colorado 80303, USA
| | - Brooks M Macdonald
- LightDeck Diagnostics, Inc., 5603 Arapahoe Ave, Boulder, Colorado 80303, USA
| | - Cassandra L Petrou
- LightDeck Diagnostics, Inc., 5603 Arapahoe Ave, Boulder, Colorado 80303, USA
| | - Michelle Platz
- LimnoTech, Inc. 501 Avis Dr., Ann Arbor Michigan 48108, USA
| | - Heidi Purcell
- Cooperative Institute for Great Lakes Research, University of Michigan, Ann Arbor, Michigan 48109, USA
| | - Jack Roser
- LightDeck Diagnostics, Inc., 5603 Arapahoe Ave, Boulder, Colorado 80303, USA
| | - Youngwoo Seo
- Department of Civil and Environmental Engineering, University of Toledo, 3006 Nitschke Hall, Toledo, Ohio 43606, USA; Department of Chemical Engineering, University of Toledo, 3048 Nitschke Hall, Toledo, Ohio 43606, USA
| | - Mashuk Siddiquee
- Department of Civil and Environmental Engineering, University of Toledo, 3006 Nitschke Hall, Toledo, Ohio 43606, USA
| | - Brenda Snyder
- Lake Erie Center, The University of Toledo, Oregon, Ohio 43616, USA
| | - Autumn T Taylor
- F.T. Stone Laboratory and Ohio Sea Grant, The Ohio State University, Put in Bay, Ohio 43456, USA
| | | | - Judy A Westrick
- Lumigen Instrument Center, Wayne State University, 5101Cass Ave., Detroit, Michigan 48202, USA
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2
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Brown KM, Ward CS, Bullerjahn GS. Metagenome-assembled genome sequences of two cyanobacterial cultures from Homa Bay County, Kenya. Microbiol Resour Announc 2024; 13:e0120523. [PMID: 38376339 DOI: 10.1128/mra.01205-23] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2023] [Accepted: 02/02/2024] [Indexed: 02/21/2024] Open
Abstract
Metagenome-assembled genomes were generated for two xenic cyanobacterial strains collected from aquatic sources in Kenya and sequenced by NovaSeq S4. Here, we report the classification and genome statistics of Microcystis panniformis WG22 and Limnospira fusiformis LS22.
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Affiliation(s)
- Katelyn M Brown
- Department of Biological Sciences, Bowling Green State University, Bowling Green, Ohio, USA
- Great Lakes Center for Fresh Waters and Human Health, Bowling Green State University, Bowling Green, Ohio, USA
| | - Christopher S Ward
- Department of Biological Sciences, Bowling Green State University, Bowling Green, Ohio, USA
- Great Lakes Center for Fresh Waters and Human Health, Bowling Green State University, Bowling Green, Ohio, USA
| | - George S Bullerjahn
- Department of Biological Sciences, Bowling Green State University, Bowling Green, Ohio, USA
- Great Lakes Center for Fresh Waters and Human Health, Bowling Green State University, Bowling Green, Ohio, USA
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Zepernick BN, Chase EE, Denison ER, Gilbert NE, Truchon AR, Frenken T, Cody WR, Martin RM, Chaffin JD, Bullerjahn GS, McKay RML, Wilhelm SW. Declines in ice cover are accompanied by light limitation responses and community change in freshwater diatoms. ISME J 2024; 18:wrad015. [PMID: 38366077 PMCID: PMC10939406 DOI: 10.1093/ismejo/wrad015] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/01/2023] [Revised: 12/27/2023] [Accepted: 12/28/2023] [Indexed: 02/18/2024]
Abstract
The rediscovery of diatom blooms embedded within and beneath the Lake Erie ice cover (2007-2012) ignited interest in psychrophilic adaptations and winter limnology. Subsequent studies determined the vital role ice plays in winter diatom ecophysiology as diatoms partition to the underside of ice, thereby fixing their location within the photic zone. Yet, climate change has led to widespread ice decline across the Great Lakes, with Lake Erie presenting a nearly "ice-free" state in several recent winters. It has been hypothesized that the resultant turbid, isothermal water column induces light limitation amongst winter diatoms and thus serves as a competitive disadvantage. To investigate this hypothesis, we conducted a physiochemical and metatranscriptomic survey that spanned spatial, temporal, and climatic gradients of the winter Lake Erie water column (2019-2020). Our results suggest that ice-free conditions decreased planktonic diatom bloom magnitude and altered diatom community composition. Diatoms increased their expression of various photosynthetic genes and iron transporters, which suggests that the diatoms are attempting to increase their quantity of photosystems and light-harvesting components (a well-defined indicator of light limitation). We identified two gene families which serve to increase diatom fitness in the turbid ice-free water column: proton-pumping rhodopsins (a potential second means of light-driven energy acquisition) and fasciclins (a means to "raft" together to increase buoyancy and co-locate to the surface to optimize light acquisition). With large-scale climatic changes already underway, our observations provide insight into how diatoms respond to the dynamic ice conditions of today and shed light on how they will fare in a climatically altered tomorrow.
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Affiliation(s)
- Brittany N Zepernick
- Department of Microbiology, The University of Tennessee, Knoxville, TN 37996, United States
| | - Emily E Chase
- Department of Microbiology, The University of Tennessee, Knoxville, TN 37996, United States
| | - Elizabeth R Denison
- Department of Microbiology, The University of Tennessee, Knoxville, TN 37996, United States
| | - Naomi E Gilbert
- Department of Microbiology, The University of Tennessee, Knoxville, TN 37996, United States
- Lawrence Livermore National Laboratory, Livermore, CA 94550, United States
| | - Alexander R Truchon
- Department of Microbiology, The University of Tennessee, Knoxville, TN 37996, United States
| | - Thijs Frenken
- HAS University of Applied Sciences, 5223 DE ‘s-Hertogenbosch, The Netherlands
- Great Lakes Institute for Environmental Research, University of Windsor, Windsor, Ontario, N9C 1A2, Canada
| | - William R Cody
- Aquatic Taxonomy Specialists, Malinta, OH 43535, United States
| | - Robbie M Martin
- Department of Microbiology, The University of Tennessee, Knoxville, TN 37996, United States
| | - Justin D Chaffin
- Stone Laboratory and Ohio Sea Grant, The Ohio State University, Put-In-Bay, OH 43456, United States
| | - George S Bullerjahn
- Department of Biological Sciences, Bowling Green State University, Bowling Green, OH 43403, United States
| | - R Michael L McKay
- Great Lakes Institute for Environmental Research, University of Windsor, Windsor, Ontario, N9C 1A2, Canada
| | - Steven W Wilhelm
- Department of Microbiology, The University of Tennessee, Knoxville, TN 37996, United States
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Bullerjahn GS, McKay RML, Visser PM. Editorial: Ecology and molecular biology of bloom-forming cyanobacteria. Front Microbiol 2023; 14:1346581. [PMID: 38152374 PMCID: PMC10752752 DOI: 10.3389/fmicb.2023.1346581] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2023] [Accepted: 12/05/2023] [Indexed: 12/29/2023] Open
Affiliation(s)
- George S. Bullerjahn
- Department of Biology and Great Lakes Center for Fresh Waters and Human Health, Bowling Green State University, Bowling Green, OH, United States
| | - R. Michael L. McKay
- Great Lakes Institute for Environmental Research, University of Windsor, Windsor, ON, Canada
| | - Petra M. Visser
- Department of Freshwater and Marine Ecology, Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam, Amsterdam, Netherlands
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5
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Stark GF, Martin RM, Smith LE, Wei B, Hellweger FL, Bullerjahn GS, McKay RML, Boyer GL, Wilhelm SW. Microcystin aids in cold temperature acclimation: Differences between a toxic Microcystis wildtype and non-toxic mutant. Harmful Algae 2023; 129:102531. [PMID: 37951605 PMCID: PMC10640677 DOI: 10.1016/j.hal.2023.102531] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/31/2023] [Revised: 10/20/2023] [Accepted: 10/20/2023] [Indexed: 11/14/2023]
Abstract
For Microcystis aeruginosa PCC 7806, temperature decreases from 26 °C to 19 °C double the microcystin quota per cell during growth in continuous culture. Here we tested whether this increase in microcystin provided M. aeruginosa PCC 7806 with a fitness advantage during colder-temperature growth by comparing cell concentration, cellular physiology, reactive oxygen species damage, and the transcriptomics-inferred metabolism to a non-toxigenic mutant strain M. aeruginosa PCC 7806 ΔmcyB. Photo-physiological data combined with transcriptomic data revealed metabolic changes in the mutant strain during growth at 19 °C, which included increased electron sinks and non-photochemical quenching. Increased gene expression was observed for a glutathione-dependent peroxiredoxin during cold treatment, suggesting compensatory mechanisms to defend against reactive oxygen species are employed in the absence of microcystin in the mutant. Our observations highlight the potential selective advantages of a longer-term defensive strategy in management of oxidative stress (i.e., making microcystin) vs the shorter-term proactive strategy of producing cellular components to actively dissipate or degrade oxidative stress agents.
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Affiliation(s)
- Gwendolyn F Stark
- Department of Microbiology, The University of Tennessee, Knoxville, TN, USA
| | - Robbie M Martin
- Department of Microbiology, The University of Tennessee, Knoxville, TN, USA
| | - Laura E Smith
- Department of Microbiology, The University of Tennessee, Knoxville, TN, USA
| | - Bofan Wei
- Department of Chemistry, State University of New York College of Environmental Science and Forestry, Syracuse, NY, USA
| | - Ferdi L Hellweger
- Water Quality Engineering, Technical University of Berlin, Berlin, Germany
| | - George S Bullerjahn
- Department of Biological Sciences, Bowling Green State University, Bowling Green, OH, USA
| | - R Michael L McKay
- Great Lakes Institute for Environmental Research, The University of Windsor, Windsor, ON, Canada
| | - Gregory L Boyer
- Department of Chemistry, State University of New York College of Environmental Science and Forestry, Syracuse, NY, USA
| | - Steven W Wilhelm
- Department of Microbiology, The University of Tennessee, Knoxville, TN, USA.
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6
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Stark GF, Martin RM, Smith LE, Wei B, Hellweger FL, Bullerjahn GS, McKay RML, Boyer GL, Wilhelm SW. Cool temperature acclimation in toxigenic Microcystis aeruginosa PCC 7806 and its non-toxigenic mutant. bioRxiv 2023:2023.08.28.555099. [PMID: 37693631 PMCID: PMC10491114 DOI: 10.1101/2023.08.28.555099] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 09/12/2023]
Abstract
For Microcystis aeruginosa PCC 7806, temperature decreases from 26° C to 19° C double the microcystin quota per cell during growth in continuous culture. Here we tested whether this increase in microcystin provided M. aeruginosa PCC 7806 with a fitness advantage during colder-temperature growth by comparing cell concentration, cellular physiology, and the transcriptomics-inferred metabolism to a non-toxigenic mutant strain M. aeruginosa PCC 7806 ΔmcyB. Photo-physiological data combined with transcriptomic data revealed metabolic changes in the mutant strain during growth at 19° C, which included increased electron sinks and non-photochemical quenching. Increased gene expression was observed for a glutathione-dependent peroxiredoxin during cold treatment, suggesting compensatory mechanisms to defend against reactive oxygen species are employed in the absence of microcystin in the mutant. Our observations highlight the potential selective advantages of a longer-term defensive strategy in management of oxidative stress (i.e., making microcystin) vs the shorter-term proactive strategy of producing cellular components to actively dissipate or degrade oxidative stress agents.
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Affiliation(s)
- Gwendolyn F Stark
- Department of Microbiology, The University of Tennessee, Knoxville, TN, USA
| | - Robbie M Martin
- Department of Microbiology, The University of Tennessee, Knoxville, TN, USA
| | - Laura E Smith
- Department of Microbiology, The University of Tennessee, Knoxville, TN, USA
| | - Bofan Wei
- Department of Chemistry, State University of New York College of Environmental Science and Forestry, Syracuse, NY, USA
| | - Ferdi L Hellweger
- Water Quality Engineering, Technical University of Berlin, Berlin, Germany
| | - George S Bullerjahn
- Department of Biological Sciences, Bowling Green State University, Bowling Green, OH, USA
| | - R Michael L McKay
- Great Lakes Institute for Environmental Research, The University of Windsor, Windsor, ON, Canada
| | - Gregory L Boyer
- Department of Chemistry, State University of New York College of Environmental Science and Forestry, Syracuse, NY, USA
| | - Steven W Wilhelm
- Department of Microbiology, The University of Tennessee, Knoxville, TN, USA
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McKindles KM, Manes M, Neudeck M, McKay RM, Bullerjahn GS. Multi-year molecular quantification and 'omics analysis of Planktothrix-specific cyanophage sequences from Sandusky Bay, Lake Erie. Front Microbiol 2023; 14:1199641. [PMID: 37455749 PMCID: PMC10343443 DOI: 10.3389/fmicb.2023.1199641] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2023] [Accepted: 06/08/2023] [Indexed: 07/18/2023] Open
Abstract
Introduction Planktothrix agardhii is a microcystin-producing cyanobacterium found in Sandusky Bay, a shallow and turbid embayment of Lake Erie. Previous work in other systems has indicated that cyanophages are an important natural control factor of harmful algal blooms. Currently, there are few cyanophages that are known to infect P. agardhii, with the best-known being PaV-LD, a tail-less cyanophage isolated from Lake Donghu, China. Presented here is a molecular characterization of Planktothrix specific cyanophages in Sandusky Bay. Methods and Results Putative Planktothrix-specific viral sequences from metagenomic data from the bay in 2013, 2018, and 2019 were identified by two approaches: homology to known phage PaV-LD, or through matching CRISPR spacer sequences with Planktothrix host genomes. Several contigs were identified as having viral signatures, either related to PaV-LD or potentially novel sequences. Transcriptomic data from 2015, 2018, and 2019 were also employed for the further identification of cyanophages, as well as gene expression of select viral sequences. Finally, viral quantification was tested using qPCR in 2015-2019 for PaV-LD like cyanophages to identify the relationship between presence and gene expression of these cyanophages. Notably, while PaV-LD like cyanophages were in high abundance over the course of multiple years (qPCR), transcriptomic analysis revealed only low levels of viral gene expression. Discussion This work aims to provide a broader understanding of Planktothrix cyanophage diversity with the goals of teasing apart the role of cyanophages in the control and regulation of harmful algal blooms and designing monitoring methodology for potential toxin-releasing lysis events.
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Affiliation(s)
- Katelyn M. McKindles
- Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, MI, United States
- Great Lakes Institute for Environmental Research, University of Windsor, Windsor, ON, Canada
- Great Lakes Center for Fresh Waters and Human Health, Bowling Green State University, Bowling Green, OH, United States
| | - Makayla Manes
- Department of Microbiology, The Ohio State University, Columbus, OH, United States
| | - Michelle Neudeck
- Great Lakes Center for Fresh Waters and Human Health, Bowling Green State University, Bowling Green, OH, United States
| | - Robert Michael McKay
- Great Lakes Institute for Environmental Research, University of Windsor, Windsor, ON, Canada
- Great Lakes Center for Fresh Waters and Human Health, Bowling Green State University, Bowling Green, OH, United States
| | - George S. Bullerjahn
- Great Lakes Center for Fresh Waters and Human Health, Bowling Green State University, Bowling Green, OH, United States
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Wagner RS, McKindles KM, Bullerjahn GS. Effects of water movement and temperature on Rhizophydium infection of Planktothrix in a shallow hypereutrophic lake. Front Microbiol 2023; 14:1197394. [PMID: 37455723 PMCID: PMC10345987 DOI: 10.3389/fmicb.2023.1197394] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2023] [Accepted: 05/31/2023] [Indexed: 07/18/2023] Open
Abstract
Grand Lake St. Marys (GLSM) is a popular recreational lake located in western Ohio, United States, generating nearly $150 million in annual revenue. However, recurring algal blooms dominated by Planktothrix agardhii, which can produce harmful microcystin toxins, have raised concerns about water safety and negatively impacted the local economy. Planktothrix agardhii is host to a number of parasites and pathogens, including an obligate fungal parasite in the Chytridiomycota (chytrids). In this study, we investigated the potential of these chytrid (Rhizophydium sp.) to infect P. agardhii blooms in the environment by modifying certain environmental conditions thought to limit infection prevalence in the wild. With a focus on temperature and water mixing, mesocosms were designed to either increase or decrease water flow compared to the control (water outside the mesocosm). In the control and water circulation mesocosms, infections were found infrequently and were found on less than 0.75% of the Planktothrix population. On the other hand, by decreasing the water flow to stagnation, chytrid infections were more frequent (found in nearly 3x as many samples) and more prevalent, reaching a maximum infection rate of 4.12%. In addition, qPCR coupled with 16S-18S sequencing was utilized to confirm the genetic presence of both host and parasite, as well as to better understand the effect of water circulation on the community composition. Statistical analysis of the data confirmed that chytrid infection was dependent on water temperature, with infections predominantly occurring between 19°C and 23°C. Additionally, water turbulence can significantly reduce the infectivity of chytrids, as infections were mostly found in stagnant mesocosms. Further, decreasing the water circulation promoted the growth of the cyanobacterial population, while increasing water agitation promoted the growth of green algae (Chlorophyta). This study starts to explore the environmental factors that affect chytrid pathogenesis which can provide valuable insights into controlling measures to reduce the prevalence of harmful algal blooms and improve water quality in GLSM and similarly affected waterbodies.
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Affiliation(s)
- Ryan S. Wagner
- Department of Biology, Bowling Green State University, Bowling Green, OH, United States
- Great Lakes Center for Fresh Waters and Human Health, Bowling Green State University, Bowling Green, OH, United States
| | - Katelyn M. McKindles
- Great Lakes Center for Fresh Waters and Human Health, Bowling Green State University, Bowling Green, OH, United States
- Ecology and Evolutionary Biology, College of Literature, Science, and the Arts, University of Michigan, Ypsilanti, MI, United States
| | - George S. Bullerjahn
- Department of Biology, Bowling Green State University, Bowling Green, OH, United States
- Great Lakes Center for Fresh Waters and Human Health, Bowling Green State University, Bowling Green, OH, United States
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McKindles KM, McKay RML, Bullerjahn GS, Frenken T. Interactions between chytrids cause variable infection strategies on harmful algal bloom forming species. Harmful Algae 2023; 122:102381. [PMID: 36754455 DOI: 10.1016/j.hal.2023.102381] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/09/2022] [Revised: 11/25/2022] [Accepted: 01/05/2023] [Indexed: 06/18/2023]
Abstract
Cyanobacteria have a great diversity of natural enemies, such as herbivores and pathogens, including fungal pathogens within the Chytridiomycota (chytrids). While these pathogens have been previously described on a select number of cyanobacterial hosts and are suspected to play a significant ecological role, little is understood about species interactions and how competition between parasites can affect epidemic development and bloom formation. Here, three Planktothrix agardhii isolates from Sandusky Bay, Lake Erie (OH, USA) were challenged in monoculture and polyculture against infection by three isolates (C1, C2, C10) of their obligate chytrid fungal pathogen, Rhizophydiales sp. The chytrid isolates were inoculated as single isolates or a mixture of up to three different isolates. In monoculture, host isolates were characterized as highly susceptible (P. agardhii 1030), moderately susceptible (P. agardhii 1808) or mostly resistant (P. agardhii 1801). Co-infection of chytrid isolates on the highly susceptible host isolate had an additive effect on chytrid prevalence, leading to a culture crash where 2 or 3 chytrid isolates were present. Co-infection of chytrid isolates on the moderately susceptible and mostly resistant isolates had no effect on chytrid infection outcome or prevalence compared to infection with a single isolate. In polyculture, the effect on host growth was most significant in the single chytrid isolate treatment, which was attenuated with the addition of mixed chytrid treatments. Genetic analysis of the resulting population after the experimental period showed a tendency for the chytrid isolate C1 and P. agardhii 1801 to dominate in mixed population samples. Two different interspecific interactions seem to be in play; varied parasite infection strategies allow for the amplification of infection prevalence due to mixed chytrids in a susceptible monoculture, or competition allows for the dominance of a single chytrid isolate in monoculture and the reduction of infection prevalence in a host polyculture. This work thus highlights how interactions between chytrid infections can change the course of epidemic development and harmful algal bloom formation.
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Affiliation(s)
- Katelyn M McKindles
- Department of Ecology and Evolutionary Biology, University of Michigan, 1105 North University Ave, Ann Arbor, MI 48109-1085, USA; Great Lakes Institute for Environmental Research (GLIER), University of Windsor, 401 Sunset Ave., Windsor, Ontario, Canada N9B 3P4; Department of Biological Sciences, Bowling Green State University, Bowling Green, OH 43403, USA.
| | - R Michael L McKay
- Great Lakes Institute for Environmental Research (GLIER), University of Windsor, 401 Sunset Ave., Windsor, Ontario, Canada N9B 3P4
| | - George S Bullerjahn
- Department of Biological Sciences, Bowling Green State University, Bowling Green, OH 43403, USA
| | - Thijs Frenken
- Great Lakes Institute for Environmental Research (GLIER), University of Windsor, 401 Sunset Ave., Windsor, Ontario, Canada N9B 3P4; Cluster Nature & Society, HAS University of Applied Sciences, Onderwijsboulevard 221, 5223 DE, 's-Hertogenbosch, the Netherlands
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10
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Zepernick BN, Wilhelm SW, Bullerjahn GS, Paerl HW. Climate change and the aquatic continuum: A cyanobacterial comeback story. Environ Microbiol Rep 2023; 15:3-12. [PMID: 36096485 PMCID: PMC10103762 DOI: 10.1111/1758-2229.13122] [Citation(s) in RCA: 9] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/16/2022] [Accepted: 08/11/2022] [Indexed: 05/20/2023]
Abstract
Billions of years ago, the Earth's waters were dominated by cyanobacteria. These microbes amassed to such formidable numbers, they ushered in a new era-starting with the Great Oxidation Event-fuelled by oxygenic photosynthesis. Throughout the following eon, cyanobacteria ceded portions of their global aerobic power to new photoautotrophs with the rise of eukaryotes (i.e. algae and higher plants), which co-existed with cyanobacteria in aquatic ecosystems. Yet while cyanobacteria's ecological success story is one of the most notorious within our planet's biogeochemical history, scientists to this day still seek to unlock the secrets of their triumph. Now, the Anthropocene has ushered in a new era fuelled by excessive nutrient inputs and greenhouse gas emissions, which are again reshaping the Earth's biomes. In response, we are experiencing an increase in global cyanobacterial bloom distribution, duration, and frequency, leading to unbalanced, and in many instances degraded, ecosystems. A critical component of the cyanobacterial resurgence is the freshwater-marine continuum: which serves to transport blooms, and the toxins they produce, on the premise that "water flows downhill". Here, we identify drivers contributing to the cyanobacterial comeback and discuss future implications in the context of environmental and human health along the aquatic continuum. This Minireview addresses the overlooked problem of the freshwater to marine continuum and the effects of nutrients and toxic cyanobacterial blooms moving along these waters. Marine and freshwater research have historically been conducted in isolation and independently of one another. Yet, this approach fails to account for the interchangeable transit of nutrients and biology through and between these freshwater and marine systems, a phenomenon that is becoming a major problem around the globe. This Minireview highlights what we know and the challenges that lie ahead.
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Affiliation(s)
- Brittany N. Zepernick
- Department of MicrobiologyThe University of Tennessee KnoxvilleKnoxvilleTennesseeUSA
| | - Steven W. Wilhelm
- Department of MicrobiologyThe University of Tennessee KnoxvilleKnoxvilleTennesseeUSA
| | - George S. Bullerjahn
- NIEHS/NSF Great Lakes Center for Fresh Waters and Human HealthBowling Green State UniversityBowling GreenOhioUSA
| | - Hans W. Paerl
- Institute of Marine SciencesUniversity of North Carolina at Chapel HillMorehead CityNorth CarolinaUSA
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Abstract
Planktothrix agardhii is a filamentous cyanobacterial species that dominates harmful algal blooms in Sandusky Bay, Lake Erie and other freshwater basins across the world. P. agardhii isolates were obtained from early (June) blooms via single filament isolation; eight have been characterized from 2016, and 12 additional isolates have been characterized from 2018 for a total of 20 new cultures. These novel isolates were processed for genomic sequencing, where reads were used to generate scaffolds and contigs which were annotated with DIAMOND BLAST hit, Pfam, and GO. Analyses include whole genome alignment to generate phylogenetic trees and comparison of genetic rearrangements between isolates. Nitrogen acquisition and metabolism was compared across isolates. Secondary metabolite production was genetically explored including microcystins, two types of aeruginosin clusters, anabaenopeptins, cyanopeptolins, microviridins, and prenylagaramides. Two common and 4 unique CRISPR-cas islands were analyzed for similar sequences across all isolates and against the known Planktothrix-specific cyanophage, PaV-LD. Overall, the uniqueness of each genome from Planktothrix blooms sampled from the same site and at similar times belies the unexplored diversity of this genus.
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Affiliation(s)
- Katelyn M. McKindles
- Great Lakes Institute for Environmental Research, University of Windsor, Windsor, ON, Canada
- Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, MI, United States of America
| | - R. Michael McKay
- Great Lakes Institute for Environmental Research, University of Windsor, Windsor, ON, Canada
- Great Lakes Center for Fresh Waters and Human Health, Bowling Green State University, Bowling Green, OH, United States of America
| | - George S. Bullerjahn
- Great Lakes Center for Fresh Waters and Human Health, Bowling Green State University, Bowling Green, OH, United States of America
- Department of Biological Sciences, Bowling Green State University, Bowling Green, OH, United States of America
- * E-mail:
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12
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Pound HL, Martin RM, Zepernick BN, Christopher CJ, Howard SM, Castro HF, Campagna SR, Boyer GL, Bullerjahn GS, Chaffin JD, Wilhelm SW. Changes in Microbiome Activity and Sporadic Viral Infection Help Explain Observed Variability in Microcosm Studies. Front Microbiol 2022; 13:809989. [PMID: 35369463 PMCID: PMC8966487 DOI: 10.3389/fmicb.2022.809989] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/05/2021] [Accepted: 02/10/2022] [Indexed: 11/13/2022] Open
Abstract
The environmental conditions experienced by microbial communities are rarely fully simulated in the laboratory. Researchers use experimental containers ("bottles"), where natural samples can be manipulated and evaluated. However, container-based methods are subject to "bottle effects": changes that occur when enclosing the plankton community that are often times unexplained by standard measures like pigment and nutrient concentrations. We noted variability in a short-term, nutrient amendment experiment during a 2019 Lake Erie, Microcystis spp. bloom. We observed changes in heterotrophic bacteria activity (transcription) on a time-frame consistent with a response to experimental changes in nutrient availability, demonstrating how the often overlooked microbiome of cyanobacterial blooms can be altered. Samples processed at the time of collection (T0) contained abundant transcripts from Bacteroidetes, which reduced in abundance during incubation in all bottles, including controls. Significant biological variability in the expression of Microcystis-infecting phage was observed between replicates, with phosphate-amended treatments showing a 10-fold variation. The expression patterns of Microcystis-infecting phage were significantly correlated with ∼35% of Microcystis-specific functional genes and ∼45% of the cellular-metabolites measured across the entire microbial community, suggesting phage activity not only influenced Microcystis dynamics, but the biochemistry of the microbiome. Our observations demonstrate how natural heterogeneity among replicates can be harnessed to provide further insight on virus and host ecology.
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Affiliation(s)
- Helena L Pound
- Department of Microbiology, The University of Tennessee, Knoxville, TN, United States
| | - Robbie M Martin
- Department of Microbiology, The University of Tennessee, Knoxville, TN, United States
| | - Brittany N Zepernick
- Department of Microbiology, The University of Tennessee, Knoxville, TN, United States
| | - Courtney J Christopher
- Biological and Small Molecule Mass Spectrometry Core, The University of Tennessee, Knoxville, TN, United States
| | - Sara M Howard
- Biological and Small Molecule Mass Spectrometry Core, The University of Tennessee, Knoxville, TN, United States
| | - Hector F Castro
- Biological and Small Molecule Mass Spectrometry Core, The University of Tennessee, Knoxville, TN, United States
| | - Shawn R Campagna
- Biological and Small Molecule Mass Spectrometry Core, The University of Tennessee, Knoxville, TN, United States
| | - Gregory L Boyer
- Department of Chemistry, State University of New York, College of Environmental Science and Forestry, Syracuse, NY, United States
| | - George S Bullerjahn
- Department of Biological Sciences, Bowling Green State University, Bowling Green, OH, United States
| | - Justin D Chaffin
- Stone Laboratory and Ohio Sea Grant, The Ohio State University, Put-In-Bay, OH, United States
| | - Steven W Wilhelm
- Department of Microbiology, The University of Tennessee, Knoxville, TN, United States
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13
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Pound HL, Martin RM, Sheik CS, Steffen MM, Newell SE, Dick GJ, McKay RML, Bullerjahn GS, Wilhelm SW. Environmental Studies of Cyanobacterial Harmful Algal Blooms Should Include Interactions with the Dynamic Microbiome. Environ Sci Technol 2021; 55:12776-12779. [PMID: 34529413 PMCID: PMC9017748 DOI: 10.1021/acs.est.1c04207] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/29/2023]
Affiliation(s)
- Helena L Pound
- Department of Microbiology, The University of Tennessee, Knoxville, Tennessee 37996-0845, United States
| | - Robbie M Martin
- Department of Microbiology, The University of Tennessee, Knoxville, Tennessee 37996-0845, United States
| | - Cody S Sheik
- Large Lakes Observatory and Department of Biology, University of Minnesota Duluth, Duluth, Minnesota 55812-3000, United States
| | - Morgan M Steffen
- Department of Biology, James Madison University, Harrisonburg, Virginia 22807-0001, United States
| | - Silvia E Newell
- Department of Earth and Environmental Sciences, Wright State University, Dayton, Ohio 45435, United States
| | - Gregory J Dick
- Department of Earth and Environmental Sciences, University of Michigan, Ann Arbor, Michigan 48109, United States
- NIEHS/NSF Great Lakes Center for Fresh Waters and Human Health, Bowling Green State University, Bowling Green, Ohio 43403, United States
| | - R Michael L McKay
- NIEHS/NSF Great Lakes Center for Fresh Waters and Human Health, Bowling Green State University, Bowling Green, Ohio 43403, United States
- Great Lakes Institute for Environmental Research, University of Windsor, Windsor, Ontario N9B 3P4, Canada
| | - George S Bullerjahn
- NIEHS/NSF Great Lakes Center for Fresh Waters and Human Health, Bowling Green State University, Bowling Green, Ohio 43403, United States
| | - Steven W Wilhelm
- Department of Microbiology, The University of Tennessee, Knoxville, Tennessee 37996-0845, United States
- NIEHS/NSF Great Lakes Center for Fresh Waters and Human Health, Bowling Green State University, Bowling Green, Ohio 43403, United States
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McKindles KM, Manes MA, McKay RM, Davis TW, Bullerjahn GS. Environmental factors affecting chytrid (Chytridiomycota) infection rates on Planktothrix agardhii. J Plankton Res 2021; 43:658-672. [PMID: 34588922 PMCID: PMC8461644 DOI: 10.1093/plankt/fbab058] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/18/2021] [Accepted: 08/17/2021] [Indexed: 05/05/2023]
Abstract
Planktothrix agardhii dominates the cyanobacterial harmful algal bloom biomass in Sandusky Bay, Lake Erie (USA) from May until September. This filamentous cyanobacterium known parasites including the chytrid fungal species Rhizophydium sp. C02, which was previously isolated from this region. The purpose of our work has been to establish how parasitic interactions affect Planktothrix population dynamics during a bloom event. Samples analyzed from the 2015 to 2019 bloom seasons using quantitative PCR investigate the spatial and temporal prevalence of chytrid infections. Abiotic factors examined in lab include manipulating temperature (17-31°C), conductivity (0.226-1.225 mS/cm) and turbulence. Planktothrix-specific chytrids are present throughout the bloom period and are occasionally at high enough densities to exert parasitic pressure on their hosts. Temperatures above 27.1°C in lab can inhibit chytrid infection, indicating the presence of a possible upper thermal refuge for the host. Data suggest that chytrids can survive conductivity spikes in lab at levels three-fold above Sandusky Bay waters if given sufficient time (7-12 days), whereas increased turbulence in lab severely inhibits chytrid infections, perhaps due to disruption of chemical signaling. Overall, these data provide insights into the environmental conditions that inhibit chytrid infections during Planktothrix-dominated blooms in temperate waters.
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Affiliation(s)
- Katelyn M McKindles
- Department of Biological Sciences, Bowling Green State University, Bowling Green, OH 43403, USA
- Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, MI 48109, USA
- Great Lakes Institute for Environmental Research, University of Windsor, Windsor, ON N9B 3P4, Canada
| | - Makayla A Manes
- Department of Biological Sciences, The Ohio State University, Columbus, OH, USA
| | - R Michael McKay
- Department of Biological Sciences, Bowling Green State University, Bowling Green, OH 43403, USA
- Great Lakes Institute for Environmental Research, University of Windsor, Windsor, ON N9B 3P4, Canada
| | - Timothy W Davis
- Department of Biological Sciences, Bowling Green State University, Bowling Green, OH 43403, USA
- Great Lakes Center for Fresh Waters and Human Health, Department of Biological Sciences, Bowling Green State University, Bowling Green, OH 43403, USA
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15
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Matson PG, Boyer GL, Bridgeman TB, Bullerjahn GS, Kane DD, McKay RML, McKindles KM, Raymond HA, Snyder BK, Stumpf RP, Davis TW. Physical drivers facilitating a toxigenic cyanobacterial bloom in a major Great Lakes tributary. Limnol Oceanogr 2020; 65:2866-2882. [PMID: 33707786 PMCID: PMC7942401 DOI: 10.1002/lno.11558] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/11/2023]
Abstract
The Maumee River is the primary source for nutrients fueling seasonal Microcystis-dominated blooms in western Lake Erie's open waters though such blooms in the river are infrequent. The river also serves as source water for multiple public water systems and a large food services facility in northwest Ohio, USA. On 20 September 2017, an unprecedented bloom was reported in the Maumee River estuary within the Toledo metropolitan area, which triggered a recreational water advisory. Here we (1) explore physical drivers likely contributing to the bloom's occurrence, and (2) describe the toxin concentration and bacterioplankton taxonomic composition. A historical analysis using ten-years of seasonal river discharge, water level, and local wind data identified two instances when high-retention conditions occurred over ≥10 days in the Maumee River estuary: in 2016 and during the 2017 bloom. Observation by remote sensing imagery supported the advection of cyanobacterial cells into the estuary from the lake during 2017 and the lack of an estuary bloom in 2016 due to a weak cyanobacterial bloom in the lake. A rapid-response survey during the 2017 bloom determined levels of the cyanotoxins, specifically microcystins, in excess of recreational contact limits at sites within the lower 20 km of the river while amplicon sequencing found these sites were dominated by Microcystis. These results highlight the need to broaden our understanding of physical drivers of cyanobacterial blooms within the interface between riverine and lacustrine systems, particularly as such blooms are expected to become more prominent in response to a changing climate.
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Affiliation(s)
- Paul G. Matson
- Department of Biological Sciences, Bowling Green State University, Bowling Green, OH 43403, USA
- Present address: Environmental Sciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA
| | - Gregory L. Boyer
- Department of Chemistry, State University of New York–College of Environment Science and Forestry, Syracuse, NY 13210, USA
| | - Thomas B. Bridgeman
- Lake Erie Center and Department of Environmental Sciences, University of Toledo, Toledo, OH 43606, USA
| | - George S. Bullerjahn
- Department of Biological Sciences, Bowling Green State University, Bowling Green, OH 43403, USA
| | - Douglas D. Kane
- Division of Natural Science, Applied Science, and Mathematics, Defiance College, Defiance, OH 43512, USA
- Present address: Biology and Environmental Sciences Department and National Center for Water Quality Research, Heidelberg University, Tiffin, OH 44883, USA
| | - R. Michael L. McKay
- Department of Biological Sciences, Bowling Green State University, Bowling Green, OH 43403, USA
- Great Lakes Institute for Environmental Research, University of Windsor, Windsor, ON N9B 3P4, Canada
| | - Katelyn M. McKindles
- Department of Biological Sciences, Bowling Green State University, Bowling Green, OH 43403, USA
| | - Heather A. Raymond
- Division of Drinking and Ground Waters, Ohio Environmental Protection Agency, Columbus, OH 43216, USA
- Present address: College of Food, Agriculture, and Environmental Sciences, The Ohio State University, Columbus, OH 43210, USA
| | - Brenda K. Snyder
- Lake Erie Center and Department of Environmental Sciences, University of Toledo, Toledo, OH 43606, USA
| | - Richard P. Stumpf
- National Oceanic and Atmospheric Administration, National Centers for Coastal Ocean Science, Silver Spring, MD 20910, USA
| | - Timothy W. Davis
- Department of Biological Sciences, Bowling Green State University, Bowling Green, OH 43403, USA
- Author of correspondence:
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16
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McKindles KM, Manes MA, DeMarco JR, McClure A, McKay RM, Davis TW, Bullerjahn GS. Dissolved Microcystin Release Coincident with Lysis of a Bloom Dominated by Microcystis spp. in Western Lake Erie Attributed to a Novel Cyanophage. Appl Environ Microbiol 2020; 86:e01397-20. [PMID: 32859600 PMCID: PMC7642080 DOI: 10.1128/aem.01397-20] [Citation(s) in RCA: 18] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2020] [Accepted: 08/25/2020] [Indexed: 11/20/2022] Open
Abstract
Western Lake Erie (Laurentian Great Lakes) is prone to annual cyanobacterial harmful algal blooms (cHABs) dominated by Microcystis spp. that often yield microcystin toxin concentrations exceeding the federal EPA recreational contact advisory of 8 μg liter-1 In August 2014, microcystin levels were detected in finished drinking water above the World Health Organization 1.0 μg liter-1 threshold for consumption, leading to a 2-day disruption in the supply of drinking water for >400,000 residents of Toledo, Ohio (USA). Subsequent metatranscriptomic analysis of the 2014 bloom event provided evidence that release of toxin into the water supply was likely caused by cyanophage lysis that transformed a portion of the intracellular microcystin pool into the dissolved fraction, rendering it more difficult to eliminate during treatment. In August 2019, a similar increase in dissolved microcystins at the Toledo water intake was coincident with a viral lytic event caused by a phage consortium different in composition from what was detected following the 2014 Toledo water crisis. The most abundant viral sequence in metagenomic data sets was a scaffold from a putative member of the Siphoviridae, distinct from the Ma-LMM01-like Myoviridae that are typically documented to occur in western Lake Erie. This study provides further evidence that viral activity in western Lake Erie plays a significant role in transformation of microcystins from the particulate to the dissolved fraction and therefore requires monitoring efforts from local water treatment plants. Additionally, identification of multiple lytic cyanophages will enable the development of a quantitative PCR toolbox to assess viral activity during cHABs.IMPORTANCE Viral attack on cHABs may contribute to changes in community composition during blooms, as well as bloom decline, yet loss of bloom biomass does not eliminate the threat of cHAB toxicity. Rather, it may increase risks to the public by delivering a pool of dissolved toxin directly into water treatment utilities when the dominating Microcystis spp. are capable of producing microcystins. Detecting, characterizing, and quantifying the major cyanophages involved in lytic events will assist water treatment plant operators in making rapid decisions regarding the pool of microcystins entering the plant and the corresponding best practices to neutralize the toxin.
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Affiliation(s)
- Katelyn M McKindles
- Department of Biological Sciences and Great Lakes Center for Fresh Waters and Human Health, Bowling Green State University, Bowling Green, Ohio, USA
| | - Makayla A Manes
- Department of Biological Sciences and Great Lakes Center for Fresh Waters and Human Health, Bowling Green State University, Bowling Green, Ohio, USA
| | - Jonathan R DeMarco
- Department of Biological Sciences and Great Lakes Center for Fresh Waters and Human Health, Bowling Green State University, Bowling Green, Ohio, USA
| | - Andrew McClure
- Division of Water Treatment for the City of Toledo, Toledo, Ohio, USA
| | - R Michael McKay
- Department of Biological Sciences and Great Lakes Center for Fresh Waters and Human Health, Bowling Green State University, Bowling Green, Ohio, USA
- Great Lakes Institute for Environmental Research, University of Windsor, Windsor, Ontario, Canada
| | - Timothy W Davis
- Department of Biological Sciences and Great Lakes Center for Fresh Waters and Human Health, Bowling Green State University, Bowling Green, Ohio, USA
- Center for Great Lakes and Watershed Studies, Bowling Green State University, Bowling Green, Ohio, USA
| | - George S Bullerjahn
- Department of Biological Sciences and Great Lakes Center for Fresh Waters and Human Health, Bowling Green State University, Bowling Green, Ohio, USA
- Center for Great Lakes and Watershed Studies, Bowling Green State University, Bowling Green, Ohio, USA
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17
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Krausfeldt LE, Steffen MM, McKay RM, Bullerjahn GS, Boyer GL, Wilhelm SW. Insight Into the Molecular Mechanisms for Microcystin Biodegradation in Lake Erie and Lake Taihu. Front Microbiol 2019; 10:2741. [PMID: 31921001 PMCID: PMC6914704 DOI: 10.3389/fmicb.2019.02741] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2019] [Accepted: 11/11/2019] [Indexed: 01/04/2023] Open
Abstract
Microcystins are potent hepatotoxins that are frequently detected in fresh water lakes plagued by toxic cyanobacteria. Microbial biodegradation has been referred to as the most important avenue for removal of microcystin from aquatic environments. The biochemical pathway most commonly associated with the degradation of microcystin is encoded by the mlrABCD (mlr) cassette. The ecological significance of this pathway remains unclear as no studies have examined the expression of these genes in natural environments. Six metatranscriptomes were generated from microcystin-producing Microcystis blooms and analyzed to assess the activity of this pathway in environmental samples. Seventy-eight samples were collected from Lake Erie, United States/Canada and Lake Tai (Taihu), China, and screened for the presence of mlr gene transcripts. Read mapping to the mlr cassette indicated transcripts for these genes were absent, with only 77 of the collective 3.7 billion reads mapping to any part of the mlr cassette. Analysis of the assembled metatranscriptomes supported this, with only distantly related sequences identified as mlrABC-like. These observations were made despite the presence of microcystin and over 500,000 reads mapping to the mcy cassette for microcystin production. Glutathione S-transferases and alkaline proteases have been previously hypothesized to be alternative pathways for microcystin biodegradation, and expression of these genes was detected across space and time in both lakes. While the activity of these alternative pathways needs to be experimentally confirmed, they may be individually or collectively more important than mlr genes in the natural environment. Importantly, the lack of mlr expression could indicate microcystin biodegradation was not occurring in the analyzed samples. This study raises interesting questions about the ubiquity, specificity and locality of microcystin biodegradation, and highlights the need for the characterization of relevant mechanisms in natural communities to understand the fate of microcystin in the environment and risk to public health.
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Affiliation(s)
- Lauren E. Krausfeldt
- Department of Microbiology, The University of Tennessee, Knoxville, Knoxville, TN, United States
| | - Morgan M. Steffen
- Department of Biology, James Madison University, Harrisonburg, VA, United States
| | - Robert M. McKay
- Great Lakes Institute for Environmental Research, University of Windsor, Windsor, ON, Canada
| | - George S. Bullerjahn
- Department of Biological Sciences, Bowling Green State University, Bowling Green, OH, United States
| | - Gregory L. Boyer
- Department of Chemistry, College of Environmental Science and Forestry, State University of New York, Syracuse, NY, United States
| | - Steven W. Wilhelm
- Department of Microbiology, The University of Tennessee, Knoxville, Knoxville, TN, United States
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18
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Davenport EJ, Neudeck MJ, Matson PG, Bullerjahn GS, Davis TW, Wilhelm SW, Denney MK, Krausfeldt LE, Stough JMA, Meyer KA, Dick GJ, Johengen TH, Lindquist E, Tringe SG, McKay RML. Metatranscriptomic Analyses of Diel Metabolic Functions During a Microcystis Bloom in Western Lake Erie (United States). Front Microbiol 2019; 10:2081. [PMID: 31551998 PMCID: PMC6746948 DOI: 10.3389/fmicb.2019.02081] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/16/2019] [Accepted: 08/23/2019] [Indexed: 12/02/2022] Open
Abstract
This study examined diel shifts in metabolic functions of Microcystis spp. during a 48-h Lagrangian survey of a toxin-producing cyanobacterial bloom in western Lake Erie in the aftermath of the 2014 Toledo Water Crisis. Transcripts mapped to the genomes of recently sequenced lower Great Lakes Microcystis isolates showed distinct patterns of gene expression between samples collected across day (10:00 h, 16:00 h) and night (22:00 h, 04:00 h). Daytime transcripts were enriched in functions related to Photosystem II (e.g., psbA), nitrogen and phosphate acquisition, cell division (ftsHZ), heat shock response (dnaK, groEL), and uptake of inorganic carbon (rbc, bicA). Genes transcribed during nighttime included those involved in phycobilisome protein synthesis and Photosystem I core subunits. Hierarchical clustering and principal component analysis (PCA) showed a tightly clustered group of nighttime expressed genes, whereas daytime transcripts were separated from each other over the 48-h duration. Lack of uniform clustering within the daytime transcripts suggested that the partitioning of gene expression in Microcystis is dependent on both circadian regulation and physicochemical changes within the environment.
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Affiliation(s)
- Emily J. Davenport
- Department of Biological Sciences, Bowling Green State University, Bowling Green, OH, United States,Cooperative Institute for Great Lakes Research (CIGLR), University of Michigan, Ann Arbor, MI, United States
| | - Michelle J. Neudeck
- Department of Biological Sciences, Bowling Green State University, Bowling Green, OH, United States
| | - Paul G. Matson
- Department of Biological Sciences, Bowling Green State University, Bowling Green, OH, United States
| | - George S. Bullerjahn
- Department of Biological Sciences, Bowling Green State University, Bowling Green, OH, United States,*Correspondence: George S. Bullerjahn,
| | - Timothy W. Davis
- Department of Biological Sciences, Bowling Green State University, Bowling Green, OH, United States
| | - Steven W. Wilhelm
- Department of Microbiology, The University of Tennessee, Knoxville, Knoxville, TN, United States
| | - Maddie K. Denney
- Graduate School of Genome Science and Technology, The University of Tennessee, Knoxville, Knoxville, TN, United States
| | - Lauren E. Krausfeldt
- Department of Microbiology, The University of Tennessee, Knoxville, Knoxville, TN, United States
| | - Joshua M. A. Stough
- Department of Microbiology, The University of Tennessee, Knoxville, Knoxville, TN, United States
| | - Kevin A. Meyer
- Cooperative Institute for Great Lakes Research (CIGLR), University of Michigan, Ann Arbor, MI, United States,Department of Earth and Environmental Sciences, University of Michigan, Ann Arbor, MI, United States
| | - Gregory J. Dick
- Department of Earth and Environmental Sciences, University of Michigan, Ann Arbor, MI, United States
| | - Thomas H. Johengen
- Cooperative Institute for Great Lakes Research (CIGLR), University of Michigan, Ann Arbor, MI, United States
| | - Erika Lindquist
- U.S. Department of Energy Joint Genome Institute, Walnut Creek, CA, United States
| | - Susannah G. Tringe
- U.S. Department of Energy Joint Genome Institute, Walnut Creek, CA, United States
| | - Robert Michael L. McKay
- Department of Biological Sciences, Bowling Green State University, Bowling Green, OH, United States,Great Lakes Institute for Environmental Research, University of Windsor, Windsor, ON, Canada
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19
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Hampel JJ, McCarthy MJ, Neudeck M, Bullerjahn GS, McKay RML, Newell SE. Ammonium recycling supports toxic Planktothrix blooms in Sandusky Bay, Lake Erie: Evidence from stable isotope and metatranscriptome data. Harmful Algae 2019; 81:42-52. [PMID: 30638497 DOI: 10.1016/j.hal.2018.11.011] [Citation(s) in RCA: 29] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/10/2018] [Revised: 08/10/2018] [Accepted: 11/16/2018] [Indexed: 05/03/2023]
Abstract
Sandusky Bay, Lake Erie, receives high nutrient loadings (nitrogen and phosphorus) from the Sandusky River, which drains an agricultural watershed. Eutrophication and cyanobacterial harmful algal blooms (cyanoHABs) persist throughout summer. Planktothrix agardhii is the dominant bloom-forming species and the main producer of microcystins in Sandusky Bay. Non-N2 fixing cyanobacteria, such as Planktothrix and Microcystis, thrive on chemically reduced forms of nitrogen, such as ammonium (NH4+) and urea. Ammonium regeneration and potential uptake rates and total microbial community demand for NH4+ were quantified in Sandusky Bay. Potential NH4+ uptake rates in the light increased from June to August at all stations. Dark uptake rates also increased seasonally and, by the end of August, were on par with light uptake rates. Regeneration rates followed a similar pattern and were significantly higher in August than June. Ammonium uptake kinetics during a Planktothrix-dominated bloom in Sandusky Bay and a Microcystis-dominated bloom in Maumee Bay were also compared. The highest half saturation constant (Km) in Sandusky Bay was measured in June and decreased throughout the season. In contrast, Km values in Maumee Bay were lowest at the beginning of summer and increased in October. A significant increase in Vmax in Sandusky Bay was observed between July and the end of August, reflective of intense competition for depleted NH4+. Metatranscriptome results from Sandusky Bay show a shift from cyanophycin synthetase (luxury NH4+ uptake; cphA1) expression in early summer to cyanophycinase (intracellular N mobilization; cphB/cphA2) expression in August, supporting the interpretation that the microbial community is nitrogen-starved in late summer. Combined, our results show that, in late summer, when nitrogen concentrations are low, cyanoHABs in Sandusky Bay rely on regenerated NH4+ to support growth and toxin production. Increased dark NH4+ uptake late in summer suggests an important heterotrophic contribution to NH4+ depletion in the phycosphere. Kinetic experiments in the two bays suggest a competitive advantage for Planktothrix over Microcystis in Sandusky Bay due to its higher affinity for NH4+ at low concentrations.
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Affiliation(s)
- Justyna J Hampel
- Department of Earth & Environmental Sciences, Wright State University, Dayton, OH, United States.
| | - Mark J McCarthy
- Department of Earth & Environmental Sciences, Wright State University, Dayton, OH, United States
| | - Michelle Neudeck
- Department of Biological Sciences, Bowling Green State University, Bowling Green, OH, United States
| | - George S Bullerjahn
- Department of Biological Sciences, Bowling Green State University, Bowling Green, OH, United States
| | - Robert Michael L McKay
- Department of Biological Sciences, Bowling Green State University, Bowling Green, OH, United States
| | - Silvia E Newell
- Department of Earth & Environmental Sciences, Wright State University, Dayton, OH, United States
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20
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Davis TW, Stumpf R, Bullerjahn GS, McKay RML, Chaffin JD, Bridgeman TB, Winslow C. Science meets policy: A framework for determining impairment designation criteria for large waterbodies affected by cyanobacterial harmful algal blooms. Harmful Algae 2019; 81:59-64. [PMID: 30638499 DOI: 10.1016/j.hal.2018.11.016..url] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Subscribe] [Scholar Register] [Received: 08/01/2018] [Revised: 11/26/2018] [Accepted: 11/27/2018] [Indexed: 05/23/2023]
Abstract
Toxic cyanobacterial harmful algal blooms (cyanoHABs) are one of the most significant threats to the security of Earth's surface freshwaters. In the United States, the Federal Water Pollution Control Act of 1972 (i.e., the Clean Water Act) requires that states report any waterbody that fails to meet applicable water quality standards. The problem is that for fresh waters impacted by cyanoHABs, no scientifically-based framework exists for making this designation. This study describes the development of a data-based framework using the Ohio waters of western Lake Erie as an exemplar for large lakes impacted by cyanoHABs. To address this designation for Ohio's open waters, the Ohio Environmental Protection Agency (EPA) assembled a group of academic, state and federal scientists to develop a framework that would determine the criteria for Ohio EPA to consider in deciding on a recreation use impairment designation due to cyanoHAB presence. Typically, the metrics are derived from on-lake monitoring programs, but for large, dynamic lakes such as Lake Erie, using criteria based on discrete samples is problematic. However, significant advances in remote sensing allows for the estimation of cyanoHAB biomass of an entire lake. Through multiple years of validation, we developed a framework to determine lake-specific criteria for designating a waterbody as impaired by cyanoHABs on an annual basis. While the criteria reported in this manuscript are specific to Ohio's open waters, the framework used to determine them can be applied to any large lake where long-term monitoring data and satellite imagery are available.
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Affiliation(s)
- Timothy W Davis
- Department of Biological Sciences, Bowling Green State University, Bowling Green, Ohio, 43403, USA.
| | - Richard Stumpf
- National Oceanic and Atmospheric Administration, National Centers for Coastal Ocean Science, Silver Spring, MD, 20910, USA
| | - George S Bullerjahn
- Department of Biological Sciences, Bowling Green State University, Bowling Green, Ohio, 43403, USA
| | - Robert Michael L McKay
- Department of Biological Sciences, Bowling Green State University, Bowling Green, Ohio, 43403, USA
| | - Justin D Chaffin
- F.T. Stone Laboratory, The Ohio State University, 878 Bayview Ave. P.O. Box 119, Put-In-Bay, OH, 43456, USA; Ohio Sea Grant College Program, The Ohio State University, 1314 Kinnear Rd., Research Area 100, Columbus, OH, 43212, USA
| | - Thomas B Bridgeman
- Department of Environmental Sciences and Lake Erie Center, University of Toledo, Toledo, OH, 43606, USA
| | - Christopher Winslow
- F.T. Stone Laboratory, The Ohio State University, 878 Bayview Ave. P.O. Box 119, Put-In-Bay, OH, 43456, USA; Ohio Sea Grant College Program, The Ohio State University, 1314 Kinnear Rd., Research Area 100, Columbus, OH, 43212, USA
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Davis TW, Stumpf R, Bullerjahn GS, McKay RML, Chaffin JD, Bridgeman TB, Winslow C. Science meets policy: A framework for determining impairment designation criteria for large waterbodies affected by cyanobacterial harmful algal blooms. Harmful Algae 2019; 81:59-64. [PMID: 30638499 DOI: 10.1016/j.hal.2018.11.016] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/01/2018] [Revised: 11/26/2018] [Accepted: 11/27/2018] [Indexed: 05/20/2023]
Abstract
Toxic cyanobacterial harmful algal blooms (cyanoHABs) are one of the most significant threats to the security of Earth's surface freshwaters. In the United States, the Federal Water Pollution Control Act of 1972 (i.e., the Clean Water Act) requires that states report any waterbody that fails to meet applicable water quality standards. The problem is that for fresh waters impacted by cyanoHABs, no scientifically-based framework exists for making this designation. This study describes the development of a data-based framework using the Ohio waters of western Lake Erie as an exemplar for large lakes impacted by cyanoHABs. To address this designation for Ohio's open waters, the Ohio Environmental Protection Agency (EPA) assembled a group of academic, state and federal scientists to develop a framework that would determine the criteria for Ohio EPA to consider in deciding on a recreation use impairment designation due to cyanoHAB presence. Typically, the metrics are derived from on-lake monitoring programs, but for large, dynamic lakes such as Lake Erie, using criteria based on discrete samples is problematic. However, significant advances in remote sensing allows for the estimation of cyanoHAB biomass of an entire lake. Through multiple years of validation, we developed a framework to determine lake-specific criteria for designating a waterbody as impaired by cyanoHABs on an annual basis. While the criteria reported in this manuscript are specific to Ohio's open waters, the framework used to determine them can be applied to any large lake where long-term monitoring data and satellite imagery are available.
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Affiliation(s)
- Timothy W Davis
- Department of Biological Sciences, Bowling Green State University, Bowling Green, Ohio, 43403, USA.
| | - Richard Stumpf
- National Oceanic and Atmospheric Administration, National Centers for Coastal Ocean Science, Silver Spring, MD, 20910, USA
| | - George S Bullerjahn
- Department of Biological Sciences, Bowling Green State University, Bowling Green, Ohio, 43403, USA
| | - Robert Michael L McKay
- Department of Biological Sciences, Bowling Green State University, Bowling Green, Ohio, 43403, USA
| | - Justin D Chaffin
- F.T. Stone Laboratory, The Ohio State University, 878 Bayview Ave. P.O. Box 119, Put-In-Bay, OH, 43456, USA; Ohio Sea Grant College Program, The Ohio State University, 1314 Kinnear Rd., Research Area 100, Columbus, OH, 43212, USA
| | - Thomas B Bridgeman
- Department of Environmental Sciences and Lake Erie Center, University of Toledo, Toledo, OH, 43606, USA
| | - Christopher Winslow
- F.T. Stone Laboratory, The Ohio State University, 878 Bayview Ave. P.O. Box 119, Put-In-Bay, OH, 43456, USA; Ohio Sea Grant College Program, The Ohio State University, 1314 Kinnear Rd., Research Area 100, Columbus, OH, 43212, USA
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Knackstedt KA, Moffett BF, Hartmann S, Wex H, Hill TCJ, Glasgo ED, Reitz LA, Augustin-Bauditz S, Beall BFN, Bullerjahn GS, Fröhlich-Nowoisky J, Grawe S, Lubitz J, Stratmann F, McKay RML. Terrestrial Origin for Abundant Riverine Nanoscale Ice-Nucleating Particles. Environ Sci Technol 2018; 52:12358-12367. [PMID: 30264996 DOI: 10.1021/acs.est.8b03881] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/26/2023]
Abstract
Ice-nucleating particles (INPs) associated with fresh waters are a neglected, but integral component of the water cycle. Abundant INPs were identified from surface waters of both the Maumee River and Lake Erie with ice nucleus spectra spanning a temperature range from -3 to -15 °C. The majority of river INPs were submicron in size and attributed to biogenic macromolecules, inferred from the denaturation of ice-nucleation activity by heat. In a watershed dominated by row-crop agriculture, higher concentrations of INPs were found in river samples compared to lake samples. Further, ice-nucleating temperatures differed between river and lake samples, which indicated different populations of INPs. Seasonal analysis of INPs that were active at warmer temperatures (≥-10 °C; INP-10) showed their concentration to correlate with river discharge, suggesting a watershed origin of these INPs. A terrestrial origin for INPs in the Maumee River was further supported by a correspondence between the ice-nucleation signatures of river INPs and INPs derived from the soil fungus Mortierella alpina. Aerosols derived from turbulence features in the river carry INP-10, although their potential influence on regional weather is unclear. INP-10 contained within aerosols generated from a weir spanning the river, ranged in concentration from 1 to 11 INP m-3, which represented a fold-change of 3.2 over average INP-10 concentrations sampled from aerosols at control locations.
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Affiliation(s)
- Kathryn A Knackstedt
- Department of Biological Sciences , Bowling Green State University , Bowling Green , Ohio 43403 , United States
| | | | - Susan Hartmann
- Leibniz Institute for Tropospheric Research , Permoserstrasse 15 , 04318 , Leipzig , Germany
| | - Heike Wex
- Leibniz Institute for Tropospheric Research , Permoserstrasse 15 , 04318 , Leipzig , Germany
| | - Thomas C J Hill
- Department of Atmospheric Science , Colorado State University , Fort Collins , Colorado 80523 , United States
| | - Elizabeth D Glasgo
- Department of Biological Sciences , Bowling Green State University , Bowling Green , Ohio 43403 , United States
| | - Laura A Reitz
- Department of Biological Sciences , Bowling Green State University , Bowling Green , Ohio 43403 , United States
| | | | - Benjamin F N Beall
- Hatfield Consultants , #200-850 Harbourside Drive , North Vancouver , British Columbia , Canada V7P 0A3
| | - George S Bullerjahn
- Department of Biological Sciences , Bowling Green State University , Bowling Green , Ohio 43403 , United States
| | - Janine Fröhlich-Nowoisky
- Max Planck Institute for Chemistry , Multiphase Chemistry Department , Hahn-Meitner-Weg 1 , 55128 , Mainz , Germany
| | - Sarah Grawe
- Leibniz Institute for Tropospheric Research , Permoserstrasse 15 , 04318 , Leipzig , Germany
| | - Jasmin Lubitz
- Leibniz Institute for Tropospheric Research , Permoserstrasse 15 , 04318 , Leipzig , Germany
| | - Frank Stratmann
- Leibniz Institute for Tropospheric Research , Permoserstrasse 15 , 04318 , Leipzig , Germany
| | - Robert Michael L McKay
- Department of Biological Sciences , Bowling Green State University , Bowling Green , Ohio 43403 , United States
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23
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Steffen MM, Davis TW, McKay RML, Bullerjahn GS, Krausfeldt LE, Stough JMA, Neitzey ML, Gilbert NE, Boyer GL, Johengen TH, Gossiaux DC, Burtner AM, Palladino D, Rowe MD, Dick GJ, Meyer KA, Levy S, Boone BE, Stumpf RP, Wynne TT, Zimba PV, Gutierrez D, Wilhelm SW. Ecophysiological Examination of the Lake Erie Microcystis Bloom in 2014: Linkages between Biology and the Water Supply Shutdown of Toledo, OH. Environ Sci Technol 2017; 51:6745-6755. [PMID: 28535339 DOI: 10.1021/acs.est.7b00856] [Citation(s) in RCA: 107] [Impact Index Per Article: 15.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/03/2023]
Abstract
Annual cyanobacterial blooms dominated by Microcystis have occurred in western Lake Erie (U.S./Canada) during summer months since 1995. The production of toxins by bloom-forming cyanobacteria can lead to drinking water crises, such as the one experienced by the city of Toledo in August of 2014, when the city was rendered without drinking water for >2 days. It is important to understand the conditions and environmental cues that were driving this specific bloom to provide a scientific framework for management of future bloom events. To this end, samples were collected and metatranscriptomes generated coincident with the collection of environmental metrics for eight sites located in the western basin of Lake Erie, including a station proximal to the water intake for the city of Toledo. These data were used to generate a basin-wide ecophysiological fingerprint of Lake Erie Microcystis populations in August 2014 for comparison to previous bloom communities. Our observations and analyses indicate that, at the time of sample collection, Microcystis populations were under dual nitrogen (N) and phosphorus (P) stress, as genes involved in scavenging of these nutrients were being actively transcribed. Targeted analysis of urea transport and hydrolysis suggests a potentially important role for exogenous urea as a nitrogen source during the 2014 event. Finally, simulation data suggest a wind event caused microcystin-rich water from Maumee Bay to be transported east along the southern shoreline past the Toledo water intake. Coupled with a significant cyanophage infection, these results reveal that a combination of biological and environmental factors led to the disruption of the Toledo water supply. This scenario was not atypical of reoccurring Lake Erie blooms and thus may reoccur in the future.
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Affiliation(s)
- Morgan M Steffen
- Department of Biology, James Madison University , Harrisonburg, Virginia 22807, United States
| | - Timothy W Davis
- NOAA-GLERL, 4840 South State Rd., Ann Arbor, Michigan 48108, United States
| | - R Michael L McKay
- Department of Biological Sciences, Bowling Green State University , Bowling Green, Ohio 43403, United States
| | - George S Bullerjahn
- Department of Biological Sciences, Bowling Green State University , Bowling Green, Ohio 43403, United States
| | - Lauren E Krausfeldt
- Department of Microbiology, University of Tennessee , Knoxville, Tennessee 37996, United States
| | - Joshua M A Stough
- Department of Microbiology, University of Tennessee , Knoxville, Tennessee 37996, United States
| | - Michelle L Neitzey
- Department of Biology, James Madison University , Harrisonburg, Virginia 22807, United States
| | - Naomi E Gilbert
- Department of Biology, James Madison University , Harrisonburg, Virginia 22807, United States
| | - Gregory L Boyer
- Department of Chemistry, State University of New York, Environmental Science and Forestry , Syracuse, New York 13210, United States
| | - Thomas H Johengen
- Cooperative Institute for Limnology and Ecosystems Research, University of Michigan , Ann Arbor, Michigan 48108, United States
| | - Duane C Gossiaux
- NOAA-GLERL, 4840 South State Rd., Ann Arbor, Michigan 48108, United States
| | - Ashley M Burtner
- Cooperative Institute for Limnology and Ecosystems Research, University of Michigan , Ann Arbor, Michigan 48108, United States
| | - Danna Palladino
- Cooperative Institute for Limnology and Ecosystems Research, University of Michigan , Ann Arbor, Michigan 48108, United States
| | - Mark D Rowe
- Cooperative Institute for Limnology and Ecosystems Research, University of Michigan , Ann Arbor, Michigan 48108, United States
| | - Gregory J Dick
- Department of Earth and Environmental Sciences, University of Michigan , Ann Arbor, Michigan 48109, United States
| | - Kevin A Meyer
- Department of Earth and Environmental Sciences, University of Michigan , Ann Arbor, Michigan 48109, United States
| | - Shawn Levy
- Genomic Service Laboratory, Hudson Alpha Institute for Biotechnology , Huntsville, Alabama 35806, United States
| | - Braden E Boone
- Genomic Service Laboratory, Hudson Alpha Institute for Biotechnology , Huntsville, Alabama 35806, United States
| | - Richard P Stumpf
- NOAA National Ocean Service, National Centers for Coastal Ocean Sciences, Silver Spring, Maryland 20910, United States
| | - Timothy T Wynne
- NOAA National Ocean Service, National Centers for Coastal Ocean Sciences, Silver Spring, Maryland 20910, United States
| | - Paul V Zimba
- Department of Life Sciences, Texas A&M Corpus Christi , Corpus Christi, Texas 78412, United States
| | - Danielle Gutierrez
- Department of Life Sciences, Texas A&M Corpus Christi , Corpus Christi, Texas 78412, United States
| | - Steven W Wilhelm
- Department of Microbiology, University of Tennessee , Knoxville, Tennessee 37996, United States
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24
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Bullerjahn GS, McKay RM, Davis TW, Baker DB, Boyer GL, D'Anglada LV, Doucette GJ, Ho JC, Irwin EG, Kling CL, Kudela RM, Kurmayer R, Michalak AM, Ortiz JD, Otten TG, Paerl HW, Qin B, Sohngen BL, Stumpf RP, Visser PM, Wilhelm SW. Global solutions to regional problems: Collecting global expertise to address the problem of harmful cyanobacterial blooms. A Lake Erie case study. Harmful Algae 2016; 54:223-238. [PMID: 28073479 PMCID: PMC5230759 DOI: 10.1016/j.hal.2016.01.003] [Citation(s) in RCA: 119] [Impact Index Per Article: 14.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/02/2015] [Revised: 01/10/2016] [Accepted: 01/12/2016] [Indexed: 05/03/2023]
Abstract
In early August 2014, the municipality of Toledo, OH (USA) issued a 'do not drink' advisory on their water supply directly affecting over 400,000 residential customers and hundreds of businesses (Wilson, 2014). This order was attributable to levels of microcystin, a potent liver toxin, which rose to 2.5μgL-1 in finished drinking water. The Toledo crisis afforded an opportunity to bring together scientists from around the world to share ideas regarding factors that contribute to bloom formation and toxigenicity, bloom and toxin detection as well as prevention and remediation of bloom events. These discussions took place at an NSF- and NOAA-sponsored workshop at Bowling Green State University on April 13 and 14, 2015. In all, more than 100 attendees from six countries and 15 US states gathered together to share their perspectives. The purpose of this review is to present the consensus summary of these issues that emerged from discussions at the Workshop. As additional reports in this special issue provide detailed reviews on many major CHAB species, this paper focuses on the general themes common to all blooms, such as bloom detection, modeling, nutrient loading, and strategies to reduce nutrients.
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Affiliation(s)
- George S Bullerjahn
- Department of Biological Sciences, Bowling Green State University, Life Sciences Building, Bowling Green, OH, 43403, USA.
| | - Robert M McKay
- Department of Biological Sciences, Bowling Green State University, Life Sciences Building, Bowling Green, OH, 43403, USA
| | | | - David B Baker
- National Center for Water Quality Research, Heidelberg University, Tiffin, OH, 44883, USA
| | - Gregory L Boyer
- Department of Chemistry, SUNY College of Environmental Science and Forestry, 1 Forestry Dr. Syracuse, NY, 13210, USA
| | - Lesley V D'Anglada
- US Environmental Protection Agency, Office of Science and Technology, 1200 Pennsylvania Ave., NW Washington, DC, 20460, USA
| | - Gregory J Doucette
- NOAA/National Ocean Service, 219 Fort Johnson Rd., Charleston, SC, 29412, USA
| | - Jeff C Ho
- Department of Civil & Environmental Engineering, Stanford University, 473 Via Ortega, Stanford, CA, 94305, USA; Department of Global Ecology, Carnegie Institution for Science, 260 Panama St., Stanford, CA, 94305, USA
| | - Elena G Irwin
- Department of Agricultural, Environmental and Development Economics, Ohio State University, 2120 Fyffe Rd., Columbus, OH, 43210, USA
| | | | - Raphael M Kudela
- Ocean Sciences, University of California Santa Cruz, 1156 High Street, Santa Cruz, CA, 95064, USA
| | - Rainer Kurmayer
- Research Institute for Limnology, University of Innsbruck, Mondseestrasse 9, Mondsee, 5310, Austria
| | - Anna M Michalak
- Department of Global Ecology, Carnegie Institution for Science, 260 Panama St., Stanford, CA, 94305, USA
| | - Joseph D Ortiz
- Department of Geology, 336 McGilvrey Hall, Kent State University, Kent, OH, 44242, USA
| | - Timothy G Otten
- Department of Microbiology, Oregon State University, 226 Nash Hall, Corvallis, OR, 97331, USA
| | - Hans W Paerl
- University of North Carolina Institute of Marine Sciences, 3431 Arendell Street, Morehead City, NC, 28557, USA
| | - Boqiang Qin
- Nanjing Institute of Geography and Limnology, 73 East Beijing Road, Nanjing, 210008, China
| | - Brent L Sohngen
- Department of Agricultural, Environmental and Development Economics, Ohio State University, 2120 Fyffe Rd., Columbus, OH, 43210, USA
| | - Richard P Stumpf
- NOAA National Centers for Coastal Ocean Science, 1305 East-West Highway code N/SCI1, Silver Spring, MD, 20910, USA
| | - Petra M Visser
- Department of Aquatic Microbiology, Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam, PO Box 94248, 1090, GE, Amsterdam, The Netherlands
| | - Steven W Wilhelm
- Department of Microbiology, University of Tennessee, 1414 West Cumberland Avenue, Knoxville, TN, 37996-0845, USA
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Davis TW, Bullerjahn GS, Tuttle T, McKay RM, Watson SB. Effects of increasing nitrogen and phosphorus concentrations on phytoplankton community growth and toxicity during Planktothrix blooms in Sandusky Bay, Lake Erie. Environ Sci Technol 2015; 49:7197-207. [PMID: 25992592 DOI: 10.1021/acs.est.5b00799] [Citation(s) in RCA: 92] [Impact Index Per Article: 10.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/11/2023]
Abstract
Sandusky Bay experiences annual toxic cyanobacterial blooms dominated by Planktothrix agardhii/suspensa. To further understand the environmental drivers of these events, we evaluated changes in the growth response and toxicity of the Planktothrix-dominated blooms to nutrient amendments with orthophosphate (PO4) and inorganic and organic forms of dissolved nitrogen (N; ammonium (NH4), nitrate (NO3) and urea) over the bloom season (June - October). We complemented these with a metagenomic analysis of the planktonic microbial community. Our results showed that bloom growth and microcystin (MC) concentrations responded more frequently to additions of dissolved N than PO4, and that the dual addition of NH4 + PO4 and Urea + PO4 yielded the highest MC concentrations in 54% of experiments. Metagenomic analysis confirmed that P. agardhii/suspensa was the primary MC producer. The phylogenetic distribution of nifH revealed that both heterocystous cyanobacteria and heterotrophic proteobacteria had the genetic potential for N2 fixation in Sandusky Bay. These results suggest that as best management practices are developed for P reductions in Sandusky Bay, managers must be aware of the negative implications of not managing N loading into this system as N may significantly impact cyanobacterial bloom size and toxicity.
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Affiliation(s)
- Timothy W Davis
- †Canada Centre for Inland Waters, Environment Canada, Burlington, Ontario L7S 1A1, Canada
| | - George S Bullerjahn
- ‡Department of Biological Sciences, Bowling Green State University, Bowling Green, Ohio 43403, United States
| | - Taylor Tuttle
- ‡Department of Biological Sciences, Bowling Green State University, Bowling Green, Ohio 43403, United States
| | - Robert Michael McKay
- ‡Department of Biological Sciences, Bowling Green State University, Bowling Green, Ohio 43403, United States
| | - Susan B Watson
- †Canada Centre for Inland Waters, Environment Canada, Burlington, Ontario L7S 1A1, Canada
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Beall BFN, Twiss MR, Smith DE, Oyserman BO, Rozmarynowycz MJ, Binding CE, Bourbonniere RA, Bullerjahn GS, Palmer ME, Reavie ED, Waters LMK, Woityra LWC, McKay RML. Ice cover extent drives phytoplankton and bacterial community structure in a large north-temperate lake: implications for a warming climate. Environ Microbiol 2015; 18:1704-19. [PMID: 25712272 DOI: 10.1111/1462-2920.12819] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/13/2015] [Accepted: 02/15/2015] [Indexed: 12/01/2022]
Abstract
Mid-winter limnological surveys of Lake Erie captured extremes in ice extent ranging from expansive ice cover in 2010 and 2011 to nearly ice-free waters in 2012. Consistent with a warming climate, ice cover on the Great Lakes is in decline, thus the ice-free condition encountered may foreshadow the lakes future winter state. Here, we show that pronounced changes in annual ice cover are accompanied by equally important shifts in phytoplankton and bacterial community structure. Expansive ice cover supported phytoplankton blooms of filamentous diatoms. By comparison, ice free conditions promoted the growth of smaller sized cells that attained lower total biomass. We propose that isothermal mixing and elevated turbidity in the absence of ice cover resulted in light limitation of the phytoplankton during winter. Additional insights into microbial community dynamics were gleaned from short 16S rRNA tag (Itag) Illumina sequencing. UniFrac analysis of Itag sequences showed clear separation of microbial communities related to presence or absence of ice cover. Whereas the ecological implications of the changing bacterial community are unclear at this time, it is likely that the observed shift from a phytoplankton community dominated by filamentous diatoms to smaller cells will have far reaching ecosystem effects including food web disruptions.
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Affiliation(s)
- B F N Beall
- Department of Biological Sciences, Bowling Green State University, Bowling Green, OH, 43403, USA
| | - M R Twiss
- Department of Biology, Clarkson University, Potsdam, NY, USA
| | - D E Smith
- Department of Biology, Clarkson University, Potsdam, NY, USA
| | - B O Oyserman
- Department of Biological Sciences, Bowling Green State University, Bowling Green, OH, 43403, USA
| | - M J Rozmarynowycz
- Department of Biological Sciences, Bowling Green State University, Bowling Green, OH, 43403, USA
| | - C E Binding
- Water Science & Technology Directorate, Environment Canada, Burlington, ON, Canada
| | - R A Bourbonniere
- Water Science & Technology Directorate, Environment Canada, Burlington, ON, Canada
| | - G S Bullerjahn
- Department of Biological Sciences, Bowling Green State University, Bowling Green, OH, 43403, USA
| | - M E Palmer
- Sport Fish and Biomonitoring Unit, Ontario Ministry of the Environment and Climate Change, Toronto, ON, Canada
| | - E D Reavie
- Center for Water and the Environment, Natural Resources Research Institute, University of Minnesota Duluth, Duluth, MN, USA
| | | | | | - R M L McKay
- Department of Biological Sciences, Bowling Green State University, Bowling Green, OH, 43403, USA
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27
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Davis TW, Watson SB, Rozmarynowycz MJ, Ciborowski JJH, McKay RM, Bullerjahn GS. Phylogenies of microcystin-producing cyanobacteria in the lower Laurentian Great Lakes suggest extensive genetic connectivity. PLoS One 2014; 9:e106093. [PMID: 25207941 PMCID: PMC4160157 DOI: 10.1371/journal.pone.0106093] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/18/2014] [Accepted: 07/29/2014] [Indexed: 11/18/2022] Open
Abstract
Lake St. Clair is the smallest lake in the Laurentian Great Lakes system. MODIS satellite imagery suggests that high algal biomass events have occurred annually along the southern shore during late summer. In this study, we evaluated these events and tested the hypothesis that summer bloom material derived from Lake St. Clair may enter Lake Erie via the Detroit River and represent an overlooked source of potentially toxic Microcystis biomass to the western basin of Lake Erie. We conducted a seasonally and spatially resolved study carried out in the summer of 2013. Our goals were to: 1) track the development of the 2013 summer south-east shore bloom 2) conduct a spatial survey to characterize the extent of toxicity, taxonomic diversity of the total phytoplankton population and the phylogenetic diversity of potential MC-producing cyanobacteria (Microcystis, Planktothrix and Anabaena) during a high biomass event, and 3) compare the strains of potential MC-producers in Lake St. Clair with strains from Lake Erie and Lake Ontario. Our results demonstrated a clear predominance of cyanobacteria during a late August bloom event, primarily dominated by Microcystis, which we traced along the Lake St. Clair coastline downstream to the Detroit River's outflow at Lake Erie. Microcystin levels exceeded the Province of Ontario Drinking Water Quality Standard (1.5 µg L(-1)) for safe drinking water at most sites, reaching up to five times this level in some areas. Microcystis was the predominant microcystin producer, and all toxic Microcystis strains found in Lake St. Clair were genetically similar to toxic Microcystis strains found in lakes Erie and Ontario. These findings suggest extensive genetic connectivity among the three systems.
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Affiliation(s)
- Timothy W. Davis
- Canadian Centre for Inland Waters, Environment Canada, Burlington, ON, Canada
| | - Susan B. Watson
- Canadian Centre for Inland Waters, Environment Canada, Burlington, ON, Canada
| | - Mark J. Rozmarynowycz
- Department of Biological Sciences, Bowling Green State University, Bowling Green, Ohio, United States of America
| | - Jan J. H. Ciborowski
- Department of Biological Sciences, University of Windsor, Windsor, Ontario, Canada
| | - Robert Michael McKay
- Department of Biological Sciences, Bowling Green State University, Bowling Green, Ohio, United States of America
| | - George S. Bullerjahn
- Department of Biological Sciences, Bowling Green State University, Bowling Green, Ohio, United States of America
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28
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Affiliation(s)
- George S Bullerjahn
- Department of Biological Sciences, Bowling Green State University Bowling Green, OH, USA
| | - Anton F Post
- Marine Biological Laboratory Woods Hole Woods Hole, MA, USA
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29
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Bollmann A, Bullerjahn GS, McKay RM. Abundance and diversity of ammonia-oxidizing archaea and bacteria in sediments of trophic end members of the Laurentian Great Lakes, Erie and Superior. PLoS One 2014; 9:e97068. [PMID: 24819357 PMCID: PMC4018257 DOI: 10.1371/journal.pone.0097068] [Citation(s) in RCA: 62] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/06/2013] [Accepted: 04/15/2014] [Indexed: 11/29/2022] Open
Abstract
Ammonia oxidation is the first step of nitrification carried out by ammonia-oxidizing Archaea (AOA) and Bacteria (AOB). Lake Superior and Erie are part of the Great Lakes system differing in trophic status with Lake Superior being oligotrophic and Lake Erie meso- to eutrophic. Sediment samples were collected from both lakes and used to characterize abundance and diversity of AOA and AOB based on the ammonia monooxygenase (amoA) gene. Diversity was accessed by a pyro-sequencing approach and the obtained sequences were used to determine the phylogeny and alpha and beta diversity of the AOA and AOB populations. In Lake Erie copy numbers of bacterial amoA genes were in the same order of magnitude or even higher than the copy numbers of the archaeal amoA genes, while in Lake Superior up to 4 orders of magnitude more archaeal than bacterial amoA copies were detected. The AOB detected in the samples from Lake Erie belonged to AOB that are frequently detected in freshwater. Differences were detected between the phylogenetic affiliations of the AOA from the two lakes. Most sequences detected in Lake Erie clustered in the Nitrososphaera cluster (Thaumarchaeal soil group I.1b) where as most of the sequences in Lake Superior were found in the Nitrosopumilus cluster (Thaumarchaeal marine group I.1a) and the Nitrosotalea cluster. Pearson correlations and canonical correspondence analysis (CCA) showed that the differences in abundance and diversity of AOA are very likely related to the sampling location and thereby to the different trophic states of the lakes.
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Affiliation(s)
- Annette Bollmann
- Department of Microbiology, Miami University, Oxford, Ohio, United States of America
- * E-mail: *
| | - George S. Bullerjahn
- Department of Biological Sciences, Bowling Green State University, Bowling Green, Ohio, United States of America
| | - Robert Michael McKay
- Department of Biological Sciences, Bowling Green State University, Bowling Green, Ohio, United States of America
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Wilhelm SW, LeCleir GR, Bullerjahn GS, McKay RM, Saxton MA, Twiss MR, Bourbonniere RA. Seasonal changes in microbial community structure and activity imply winter production is linked to summer hypoxia in a large lake. FEMS Microbiol Ecol 2013; 87:475-85. [PMID: 24164471 DOI: 10.1111/1574-6941.12238] [Citation(s) in RCA: 54] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2013] [Revised: 09/25/2013] [Accepted: 10/18/2013] [Indexed: 11/29/2022] Open
Abstract
Carbon and nutrient cycles in large temperate lakes such as Lake Erie are primarily driven by phototrophic and heterotrophic microorganisms, although our understanding of these is often constrained to late spring through summer due to logistical constraints. During periods of > 90% ice cover in February of 2008, 2009, and 2010, we collected samples from an icebreaker for an examination of bacterial production as well as microbial community structure. In comparison with summer months (August 2002 and 2010), we tested hypotheses concerning seasonal changes in microbial community diversity and production. Bacterial production estimates were c. 2 orders of magnitude higher (volume normalized) in summer relative to winter. Our observations further demonstrate that the microbial community, including single-celled phototrophs, varied in composition between August and February. Sediment traps deployed and collected over a 3 year period (2008-2011) confirmed that carbon export was ongoing and not limiting winter production. The results support the notion that active primary producers in winter months export carbon to the sediments that is not consumed until the warmer seasons. The establishment of this linkage is a critical observation in efforts to understand the extent and severity of annual summertime formations of a zone of regional hypoxia in Lake Erie.
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Affiliation(s)
- Steven W Wilhelm
- Department of Microbiology, The University of Tennessee, Knoxville, TN, USA
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D'souza NA, Kawarasaki Y, Gantz JD, Lee RE, Beall BFN, Shtarkman YM, Koçer ZA, Rogers SO, Wildschutte H, Bullerjahn GS, McKay RML. Diatom assemblages promote ice formation in large lakes. ISME J 2013; 7:1632-40. [PMID: 23552624 DOI: 10.1038/ismej.2013.49] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/10/2012] [Revised: 02/12/2013] [Accepted: 02/16/2013] [Indexed: 11/09/2022]
Abstract
We present evidence for the directed formation of ice by planktonic communities dominated by filamentous diatoms sampled from the ice-covered Laurentian Great Lakes. We hypothesize that ice formation promotes attachment of these non-motile phytoplankton to overlying ice, thereby maintaining a favorable position for the diatoms in the photic zone. However, it is unclear whether the diatoms themselves are responsible for ice nucleation. Scanning electron microscopy revealed associations of bacterial epiphytes with the dominant diatoms of the phytoplankton assemblage, and bacteria isolated from the phytoplankton showed elevated temperatures of crystallization (T(c)) as high as -3 °C. Ice nucleation-active bacteria were identified as belonging to the genus Pseudomonas, but we could not demonstrate that they were sufficiently abundant to incite the observed freezing. Regardless of the source of ice nucleation activity, the resulting production of frazil ice may provide a means for the diatoms to be recruited to the overlying lake ice, thereby increasing their fitness. Bacterial epiphytes are likewise expected to benefit from their association with the diatoms as recipients of organic carbon excreted by their hosts. This novel mechanism illuminates a previously undescribed stage of the life cycle of the meroplanktonic diatoms that bloom in Lake Erie and other Great Lakes during winter and offers a model relevant to aquatic ecosystems having seasonal ice cover around the world.
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Affiliation(s)
- N A D'souza
- Department of Biological Sciences, Bowling Green State University, Bowling Green, OH 43403, USA
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Ilikchyan IN, McKay RML, Kutovaya OA, Condon R, Bullerjahn GS. Seasonal Expression of the Picocyanobacterial Phosphonate Transporter Gene phnD in the Sargasso Sea. Front Microbiol 2010; 1:135. [PMID: 21687717 PMCID: PMC3109553 DOI: 10.3389/fmicb.2010.00135] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/24/2010] [Accepted: 12/02/2010] [Indexed: 01/01/2023] Open
Abstract
In phosphorus-limited marine environments, picocyanobacteria (Synechococcus and Prochlorococcus spp.) can hydrolyze naturally occurring phosphonates as a P source. Utilization of 2-aminoethylphosphonate (2-AEP) is dependent on expression of the phn genes, encoding functions required for uptake, and C–P bond cleavage. Prior work has indicated that expression of picocyanobacterial phnD, encoding the phosphonate binding protein of the phosphonate ABC transporter, is a proxy for the assimilation of phosphonates in natural assemblages of Synechococcus spp. and Prochlorococcus spp (Ilikchyan et al., 2009). In this study, we expand this work to assess seasonal phnD expression in the Sargasso Sea. By RT-PCR, our data confirm that phnD expression is constitutive for the Prochlorococcus spp. detected, but in Synechococcus spp. phnD transcription follows patterns of phosphorus availability in the mixed layer. Specifically, our data suggest that phnD is repressed in the spring when P is bioavailable following deep winter mixing. In the fall, phnD expression follows a depth-dependent pattern reflecting depleted P at the surface following summertime drawdown, and elevated P at depth.
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Affiliation(s)
- Irina N Ilikchyan
- Department of Biological Sciences, Bowling Green State University Bowling Green, OH, USA
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Kutovaya OA, McKay RML, Bullerjahn GS. Expression of hcp in freshwater Synechococcus spp., a gene encoding a hyperconserved protein in picocyanobacteria. J Basic Microbiol 2010; 50:227-31. [PMID: 20143351 DOI: 10.1002/jobm.200900337] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
Marine picoplankton of the genus Synechococcus and Prochlorococcus spp. are widely studied members of the picocyanobacterial clade, composed of unicellular cyanobacteria that dominate pelagic regions of the ocean. Less studied are the related freshwater Synechococcus spp. that similarly dominate the euphotic zone of oligotrophic lakes. Previous work has shown that marine picocyanobacteria harbor a small gene, hcp, that encodes a 62 amino acid protein 100% conserved among all strains examined. The gene is restricted exclusively to the picocyanobacterial lineage. The current study reveals that hcp is also 100% conserved in four freshwater Synechococcus spp. strains isolated from the Laurentian Great Lakes, and that the gene constitutively expressed with genes encoding a ribosomal protein and two tRNA genes. The synteny of the hcp region is also conserved between the marine and freshwater strains. Last, the hcp gene and the organization of the surrounding genetic region has been retained in the reduced genome of a picocyanobacterial endosymbiont of the amoeba Paulinella sp.
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Affiliation(s)
- Olga A Kutovaya
- Department of Biological Sciences, Bowling Green State University, Life Sciences Building, Bowling Green, OH 43403, USA
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Bullerjahn GS, Boyanapalli R, Rozmarynowycz MJ, McKay RML. Cyanobacterial bioreporters as sensors of nutrient availability. Adv Biochem Eng Biotechnol 2010; 118:165-188. [PMID: 20091289 DOI: 10.1007/10_2009_23] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/28/2023]
Abstract
Due to their ubiquity in aquatic environments and their contribution to total biomass, especially in oligotrophic systems, cyanobacteria can be viewed as a proxy for primary productivity in both marine and fresh waters. In this chapter we describe the development and use of picocyanobacterial bioreporters to measure the bioavailability of nutrients that may constrain total photosynthesis in both lacustrine and marine systems. Issues pertaining to bioreporter construction, performance and field applications are discussed. Specifically, luminescent Synechococcus spp. and Synechocystis spp. bioreporters are described that allow the bioavailability of phosphorus, nitrogen and iron to be accurately measured in environmental samples.
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Affiliation(s)
- George S Bullerjahn
- Department of Biological Sciences, Bowling Green State University, Bowling Green, OH, 43403, USA
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Ilikchyan IN, McKay RML, Zehr JP, Dyhrman ST, Bullerjahn GS. Detection and expression of the phosphonate transporter genephnDin marine and freshwater picocyanobacteria. Environ Microbiol 2009; 11:1314-24. [DOI: 10.1111/j.1462-2920.2009.01869.x] [Citation(s) in RCA: 80] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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Sharma AK, Sommerfeld K, Bullerjahn GS, Matteson AR, Wilhelm SW, Jezbera J, Brandt U, Doolittle WF, Hahn MW. Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria. ISME J 2009; 3:726-37. [DOI: 10.1038/ismej.2009.13] [Citation(s) in RCA: 101] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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Piunova V, Berger D, Neckers DC, Bullerjahn GS, McKay RM, Fedorov AV. Biocidal performance of acrylated glyphosate in a model photopolymerizable coating formulation. Photochem Photobiol Sci 2008; 7:1565-9. [PMID: 19037510 DOI: 10.1039/b809659g] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/09/2008] [Accepted: 07/21/2008] [Indexed: 12/16/2023]
Abstract
Acrylated glyphosate was blended into a model polyolacrylate formulation and copolymerized. The resulting copolymer retains herbicidal activity similar to that of the monomer as indicated by the results of biological tests. No release of biocide from the coating was observed. The potential value of these biologically active acrylic formulations as biofouling compositions has been demonstrated by field trials.
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Affiliation(s)
- Victoria Piunova
- Center for Photochemical Sciences, Bowling Green State University, Bowling Green, OH 43403, USA
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Hulsker R, Baranova MV, Bullerjahn GS, Ubbink M. Dynamics in the transient complex of plastocyanin-cytochrome f from Prochlorothrix hollandica. J Am Chem Soc 2008; 130:1985-91. [PMID: 18201089 DOI: 10.1021/ja077453p] [Citation(s) in RCA: 37] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
Abstract
The nature of transient protein complexes can range from a highly dynamic ensemble of orientations to a single well-defined state. This represents variation in the equilibrium between the encounter and final, functional state. The transient complex between plastocyanin (Pc) and cytochrome f (cytf) of the cyanobacterium Prochlorothrix hollandica was characterized by NMR spectroscopy. Intermolecular pseudocontact shifts and chemical shift perturbations were used as restraints in docking calculations to determine the structure of the wild-type Pc-cytf complex. The orientation of Pc is similar to orientations found in Pc-cytf complexes from other sources. Electrostatics seems to play a modest role in complex formation. A large variability in the ensemble of lowest energy structures indicates a dynamic nature of the complex. Two unusual hydrophobic patch residues in Pc have been mutated to the residues found in other plastocyanins (Y12G/P14L). The binding constants are similar for the complexes of cytf with wild-type Pc and mutant Pc, but the chemical shift perturbations are smaller for the complex with mutant Pc. Docking calculations for the Y12G/P14L Pc-cytf complex did not produce a converged ensemble of structures. Simulations of the dynamics were performed using the observed averaged NMR parameters as input. The results indicate a surprisingly large amplitude of mobility of Y12G/P14L Pc within the complex. It is concluded that the double mutation shifts the complex further from the well-defined toward the encounter state.
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Affiliation(s)
- Rinske Hulsker
- Leiden Institute of Chemistry, Leiden University, Gorlaeus Laboratories, P.O. Box 9502, 2300 RA Leiden, The Netherlands
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Abstract
Very little is known about the biodiversity of freshwater autotrophic picoplankton (APP) in the Laurentian Great Lakes, a system comprising 20% of the world's lacustrine freshwater. In this study, the genetic diversity of Lake Superior APP was examined by analyzing 16S rRNA gene and cpcBA PCR amplicons from water samples. By neighbor joining, the majority of 16S rRNA gene sequences clustered within the "picocyanobacterial clade" consisting of freshwater and marine Synechococcus and Prochlorococcus. Two new groups of Synechococcus spp., the pelagic Lake Superior clusters I and II, do not group with any of the known freshwater picocyanobacterial clusters and were the most abundant species (50 to 90% of the sequences) in samples collected from offshore Lake Superior stations. Conversely, at station Portage Deep (PD), located in a nearshore urbanized area, only 4% of the sequences belonged to these clusters and the remaining clones reflected the freshwater Synechococcus diversity described previously at sites throughout the world. Supporting the 16S rRNA gene data, the cpcBA library from nearshore station PD revealed a cosmopolitan diversity, whereas the majority of the cpcBA sequences (97.6%) from pelagic station CD1 fell within a unique Lake Superior cluster. Thus far, these picocyanobacteria have not been cultured, although their phylogenetic assignment suggests that they are phycoerythrin (PE) rich, consistent with the observation that PE-rich APP dominate Lake Superior picoplankton. Lastly, flow cytometry revealed that the summertime APP can exceed 10(5) cells ml-1 and suggests that the APP shifts from a community of PE and phycocyanin-rich picocyanobacteria and picoeukaryotes in winter to a PE-rich community in summer.
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Affiliation(s)
- Natalia V Ivanikova
- Department of Biological Sciences, Life Sciences Building, Bowling Green State University, Bowling Green, OH 43403, USA
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Boyanapalli R, Bullerjahn GS, Pohl C, Croot PL, Boyd PW, McKay RML. Luminescent whole-cell cyanobacterial bioreporter for measuring Fe availability in diverse marine environments. Appl Environ Microbiol 2006; 73:1019-24. [PMID: 17158623 PMCID: PMC1800772 DOI: 10.1128/aem.01670-06] [Citation(s) in RCA: 39] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
A Synechococcus sp. strain PCC 7002 Fe bioreporter was constructed containing the isiAB promoter fused to the Vibrio harveyi luxAB genes. Bioreporter luminescence was characterized with respect to the free ferric ion concentration in trace metal-buffered synthetic medium. The applicability of the Fe bioreporter to assess Fe availability in the natural environment was tested by using samples collected from the Baltic Sea and from the high-nutrient, low-chlorophyll subarctic Pacific Ocean. Parallel assessment of dissolved Fe and bioreporter response confirmed that direct chemical measurements of dissolved Fe should not be considered alone when assessing Fe availability to phytoplankton.
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Affiliation(s)
- Ramakrishna Boyanapalli
- Department of Biological Sciences, Bowling Green State University, Bowling Green, OH 43403, USA
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Bullerjahn GS, Jensen TC, Sherman DM, Sherman LA. Immunological characterization of the Prochlorothrix hollandica and Prochloron sp. chlorophyll a/b antenna proteins. FEMS Microbiol Lett 2006. [DOI: 10.1111/j.1574-6968.1990.tb13844.x] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022] Open
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Anula HM, Myshkin E, Guliaev A, Luman C, Danilov EO, Castellano FN, Bullerjahn GS, Rodgers MAJ. Photo Processes on Self-Associated Cationic Porphyrins and Plastocyanin Complexes 1. Ligation of Plastocyanin Tyrosine 83 onto Metalloporphyrins and Electron-Transfer Fluorescence Quenching. J Phys Chem A 2006; 110:2545-59. [PMID: 16480316 DOI: 10.1021/jp054712t] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The spectroscopic properties of the self-associated complexes formed between the anionic surface docking site of spinach plastocyanin and the cationic metalloporphyrins, in which the tyrosine 83 (Y83) moiety is placed just below the docking site, tetrakis(N-methyl-4-pyridyl)porphyrin (Pd(II)TMPyP(4+) and Zn(II)TMPyP(4+)), have been studied and reported herein. The fluorescence quenching phenomenon of the self-assembled complex of Zn(II)TMPyP(4+)/plastocyanin has also been discovered. The observed red-shifting of the Soret and Q-bands of the UV-visible spectra, ca. 9 nm for Pd(II)TMPyP(4+)/plastocyanin and ca. 6 nm for the Zn(II)TMPyP(4+)/plastocyanin complexes, was explained in terms of exciton theory coupled with the Gouterman model. Thus, the hydroxyphenyl terminus of the Y83 residue of the self-associated plastocyanin/cationic porphyrin complexes was implicated in the charge-transfer ligation with the central metal atoms of these metalloporphyrins. Moreover, ground-state spectrometric-binding studies between Pd(II)TMPyP(4+) and the Y83 mutant plastocyanin (Y83F-PC) system proved that Y83 moiety of plastocyanin played a critical role in the formation of such ion-pair complexes. Difference absorption spectra and the Job's plots showed that the electrostatic attractions between the cationic porphyrins and the anionic patch of plastocyanin, bearing the nearby Y83 residue, led to the predominant formation of a self-associated 1:1 complex in the ground-state with significantly high binding constants (K = (8.0 +/- 1.1) x 10(5) M(-1) and (2.7 +/- 0.8) x 10(6) M(-1) for Pd(II)TMPyP(4+) and zinc variant, respectively) in low ionic strength buffer, 1 mM KCl and 1 mM phosphate buffer (pH 7.4). Molecular modeling calculations supported the formation of a 1:1 self-associated complex between the porphyrin and plastocyanin with an average distance of ca. 9 A between the centers of mass of the porphyrin and Y83 positioned just behind the anionic surface docking site on the protein surface. The photoexcited singlet state of Zn(II)TMPyP(4+) was quenched by the Y83 residue of the self-associated plastocyanin in a static mechanism as evidenced by steady-state and time-resolved fluorescence experiments. Even when all the porphyrin was complexed (more than 97%), significant residual fluorescence from the complex was observed such that the amplitude of quenching of the singlet state of uncomplexed species was enormously obscured.
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Affiliation(s)
- Hewa M Anula
- The Center for Photochemical Sciences and Departments of Chemistry and Biological Sciences, Bowling Green State University, Bowling Green, Ohio 43403, USA
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Dwivedi K, Sen A, Bullerjahn GS. Expression and mutagenesis of the dpsA gene of Synechococcus sp. PCC7942, encoding a DNA-binding protein involved in oxidative stress protection. FEMS Microbiol Lett 2006. [DOI: 10.1111/j.1574-6968.1997.tb12690.x] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022] Open
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Hervas M, Myshkin E, Vintonenko N, De la Rosa MA, Bullerjahn GS, Navarro JA. Mutagenesis of prochlorothrix plastocyanin reveals additional features in photosystem I interactions. J Biol Chem 2003; 278:8179-83. [PMID: 12509429 DOI: 10.1074/jbc.m211913200] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022] Open
Abstract
Three surface residues of plastocyanin from Prochlorothrix hollandica have been modified by site-directed mutagenesis. Changes have been made in methionine 33, located in the hydrophobic patch of the copper protein, and in arginine 86 and proline 53, both located in the eastern hydrophilic area. The reactivity toward photosystem I of single mutants M33N, P53A, P53E, R86Q, R86E, and the double mutant M33N/P14L has been studied by laser flash absorption spectroscopy. All the mutations yield increased reactivity of plastocyanin toward photosystem I as compared with wild type plastocyanin, thus indicating that in Prochlorothrix electron donation to photosystem I is not optimized. The most drastic increases in the intracomplex electron transfer rate are obtained with mutants in methionine 33, whereas replacing arginine 86 only modestly affects the plastocyanin-photosystem I equilibrium constant for complex formation. Mutations at position 53 also promote major changes in the association of plastocyanin with photosystem I, yielding a change from a mechanism involving complex formation to a simpler collisional interaction. Molecular dynamics calculations indicate that mutations at position 33 promote changes in the H-bond network around the copper center. The comparative kinetic analysis of the reactivity of Prochlorothrix plastocyanin mutants toward photosystem I from other cyanobacteria reveals that mutations M33N, P53A, and P53E result in enhanced general reactivity.
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Affiliation(s)
- Manuel Hervas
- Instituto de Bioquimica Vegetal y Fotosintesis, Centro de Investigaciones Cientificas Isla de la Cartuja, Universidad de Sevilla y Consejo Superior de Investigaciones Cientificas, Américo Vespucio s/n, Spain
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Abstract
Proteins of the Dps family are divergent ferritins that have been shown to bind DNA with high affinity during periods of nutrient and oxidative stress. Such binding protects the chromosome from peroxide attack. Surprisingly, we show by immunocytochemistry that the cyanobacterial Dps homolog, DpsA, localizes preferentially to the thylakoid membrane in Synechococcus sp. strain PCC7942. We propose that two DpsA pools are functioning in this species--an insoluble fraction bound to the chromosome, and a soluble fraction acting as a ferritin involved metal homeostasis of the photosynthetic apparatus. This model is presented in light of recent work on the E. coli Dps protein showing that DNA binding is regulated by the metal-binding capacity of the Dps complex (Frenkiel-Krispin et al. 2001). Additionally, the pattern of DpsA localization in cells as they progress through the growth curve suggests that the DpsA complex may be involved in metal ion transport across the cell envelope.
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Affiliation(s)
- Kathryn A Durham
- Department of Biological Sciences, Bowling Green State University, Bowling Green, OH 43403, USA
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Durham KA, Porta D, McKay RML, Bullerjahn GS. Expression of the iron-responsive irpA gene from the cyanobacterium Synechococcus sp strain PCC 7942. Arch Microbiol 2003; 179:131-4. [PMID: 12560991 DOI: 10.1007/s00203-002-0503-6] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/25/2002] [Revised: 09/25/2002] [Accepted: 10/11/2002] [Indexed: 10/20/2022]
Abstract
Expression of the iron-stress-induced irpA gene of Synechococcus sp. strain PCC 7942 was investigated by constructing luminescent p irpA::luxAB promoter fusions. Growth of Fe-replete and Fe-limited cultures yielded high levels of luminescence only under conditions of iron deficiency. Promoter fusion deletions revealed that low Fe irpA transcription is dependent on a 25-nucleotide sequence that includes a region of dyad symmetry centered 19 nucleotides from the transcription start. Assaying luminescence at defined iron concentrations in trace-metal-buffered media showed that irpA transcription is activated at concentrations below 100 nm Fe. Overall, the expression pattern and promoter structure of irpAsuggests a novel form of metal-dependent regulation in this species.
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Affiliation(s)
- Kathryn A Durham
- Department of Biological Sciences, Bowling Green State University, Bowling Green, OH 43403, USA
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Crowley PB, Vintonenko N, Bullerjahn GS, Ubbink M. Plastocyanin-cytochrome f interactions: the influence of hydrophobic patch mutations studied by NMR spectroscopy. Biochemistry 2002; 41:15698-705. [PMID: 12501198 DOI: 10.1021/bi026349b] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Transient complex formation between plastocyanin from Prochlorothrix hollandica and cytochrome f from Phormidium laminosum was investigated using nuclear magnetic resonance (NMR) spectroscopy. Binding curves derived from NMR titrations at 10 mM ionic strength reveal a 1:1 stoichiometry and a binding constant of 6 (+/-2) x 10(3) M(-1) for complex formation, 1 order of magnitude larger than that for the physiological plastocyanin-cytochrome f complex from Ph. laminosum. Chemical-shift perturbation mapping indicates that the hydrophobic patch of plastocyanin is involved in the complex interface. When the unusual hydrophobic patch residues of P. hollandica plastocyanin were reverted to the conserved residues found in most other plastocyanins (Y12G/P14L), the binding constant for the interaction with cytochrome f was unaffected. However, the chemical shift perturbation map was considerably different, and the size of the average perturbation decreased by 40%. The complexes of both the wild-type and double mutant plastocyanin with cytochrome f were sensitive to ionic strength, contrary to the physiological complex. The possible implications of these findings for the mechanism of transient complex formation are discussed.
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Affiliation(s)
- Peter B Crowley
- Gorlaeus Laboratories, Leiden Institute of Chemistry, Leiden University, P.O. Box 9502, 2300 RA Leiden, The Netherlands
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Myshkin E, Leontis NB, Bullerjahn GS. Computational simulation of the docking of Prochlorothrix hollandica plastocyanin to potosystem I: modeling the electron transfer complex. Biophys J 2002; 82:3305-13. [PMID: 12023253 PMCID: PMC1302118 DOI: 10.1016/s0006-3495(02)75671-3] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022] Open
Abstract
We have used several docking algorithms (GRAMM, FTDOCK, DOT, AUTODOCK) to examine protein-protein interactions between plastocyanin (Pc)/photosystem I (PSI) in the electron transfer reaction. Because of the large size and complexity of this system, it is faster and easier to use computer simulations than conduct x-ray crystallography or nuclear magnetic resonance experiments. The main criterion for complex selection was the distance between the copper ion of Pc and the P700 chlorophyll special pair. Additionally, the unique tyrosine residue (Tyr(12)) of the hydrophobic docking surface of Prochlorothrix hollandica Pc yields a specific interaction with the lumenal surface of PSI, thus providing the second constraint for the complex. The structure that corresponded best to our criteria was obtained by the GRAMM algorithm. In this structure, the solvent-exposed histidine that coordinates copper in Pc is at the van der Waals distance from the pair of stacked tryptophans that separate the chlorophylls from the solvent, yielding the shortest possible metal-to-metal distance. The unique tyrosine on the surface of the Prochlorothrix Pc hydrophobic patch also participates in a hydrogen bond with the conserved Asn(633) of the PSI PsaB polypeptide (numbering from the Synechococcus elongatus crystal structure). Free energy calculations for complex formation with wild-type Pc, as well as the hydrophobic patch Tyr(12)Gly and Pro(14)Leu Pc mutants, were carried out using a molecular mechanics Poisson-Boltzman, surface area approach (MM/PBSA). The results are in reasonable agreement with our experimental studies, suggesting that the obtained structure can serve as an adequate model for P. hollandica Pc-PSI complex that can be extended for the study of other cyanobacterial Pc/PSI reaction pairs.
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Affiliation(s)
- Eugene Myshkin
- Department of Biological Sciences, Center for Photochemical Sciences, Bowling Green State University, Bowling Green, Ohio 43403, USA
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