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Chege B, Ndambuki G, Owiny M, Kiyong’a A, Fèvre EM, Cook EAJ. Improved latrine coverage may reduce porcine cysticercosis: a comparative cross-sectional study, Busia County, Kenya 2021. Front Vet Sci 2023; 10:1155467. [PMID: 37476824 PMCID: PMC10354266 DOI: 10.3389/fvets.2023.1155467] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2023] [Accepted: 06/14/2023] [Indexed: 07/22/2023] Open
Abstract
Introduction Smallholder pig farming is an important economic activity for many poor, rural communities in developing countries. Porcine cysticercosis is a growing public health risk in countries where pig rearing is popular. A sanitation-based intervention to reduce the prevalence of open defecation was completed in Busia County, Kenya in 2016. We capitalized on this third party intervention to evaluate its impact on porcine cysticercosis prevalence. Methods We conducted a comparative cross-sectional survey from August through to September 2021. Household selection was done using multistage sampling. Household questionnaire data on pig production, transmission, risk factors and awareness of porcine cysticercosis were collected from 251 households. Lingual palpation was used to test for cysticerci in 370 pigs while serum was tested for circulating antigen using Ag-ELISA. We compared results of our survey to an effective baseline, which was a near equivalent cross sectional survey conducted in 2012 before the third party sanitary intervention was established. The difference in prevalence was measured using Chi-square tests. Multivariable logistic regression analysis was used to identify risk factors for lingual cysts in pigs. Results The prevalence of palpable lingual cysts was estimated to be 3.8% (95% CI 2.3-6.3%) (14/370). This was 6% (95% CI 0.8-13.9%; p-value 0.0178) lower than the prevalence reported in the pre-implementation period of 9.7% (95% CI: 4.5-17.6%). Circulating antigen was detected in 2 samples (0.54%, 95% CI: 0.2-1.9). Latrine coverage was 86% (95% CI: 81-90%), which was 11% (95% CI: 4.8-16.8%; p < 0.001) higher than the pre-implementation period coverage of 75% (95% CI: 71-79%). There was reduced prevalence of lingual cysts in pigs from households that had a latrine (OR = 0.14; 95% CI: 0.05-0.43; p < 0.001) and where pigs were confined or tethered (OR = 0.27; 95% CI: 0.07-1.02; p = 0.053). Conclusion There was a reduction in the prevalence of porcine cysticercosis in Busia County over the study period from 2012 to 2021. This was not a trial design so we are unable to directly link the decline to a specific cause, but the data are consistent with previous research indicating that improved sanitation reduces porcine cysticercosis. Programs for controlling porcine cysticercosis should include a focus on sanitation in addition to other integrated One Health approaches.
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Affiliation(s)
- Bernard Chege
- Field Epidemiology and Laboratory Training Program (FELTP), Nairobi, Kenya
- International Livestock Research Institute (ILRI), Nairobi, Kenya
| | - Gideon Ndambuki
- International Livestock Research Institute (ILRI), Nairobi, Kenya
| | - Maurice Owiny
- Field Epidemiology and Laboratory Training Program (FELTP), Nairobi, Kenya
| | - Alice Kiyong’a
- International Livestock Research Institute (ILRI), Nairobi, Kenya
| | - Eric M. Fèvre
- International Livestock Research Institute (ILRI), Nairobi, Kenya
- Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Liverpool, United Kingdom
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Chepkwony M, Wragg D, Latré de Laté P, Paxton E, Cook E, Ndambuki G, Kitala P, Gathura P, Toye P, Prendergast J. Longitudinal transcriptome analysis of cattle infected with Theileria parva. Int J Parasitol 2022; 52:799-813. [PMID: 36244429 DOI: 10.1016/j.ijpara.2022.07.006] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2022] [Revised: 07/01/2022] [Accepted: 07/14/2022] [Indexed: 11/05/2022]
Abstract
The apicomplexan cattle parasite Theileria parva is a major barrier to improving the livelihoods of smallholder farmers in Africa, killing over one million cattle on the continent each year. Although exotic breeds not native to Africa are highly susceptible to the disease, previous studies have illustrated that such breeds often show innate tolerance to infection by the parasite. The mechanisms underlying this tolerance remain largely unclear. To better understand the host response to T. parva infection we characterised the transcriptional response over 15 days in tolerant and susceptible cattle (n = 29) naturally exposed to the parasite. We identify key genes and pathways activated in response to infection as well as, importantly, several genes differentially expressed between the animals that ultimately survived or succumbed to infection. These include genes linked to key cell proliferation and infection pathways. Furthermore, we identify response expression quantitative trait loci containing genetic variants whose impact on the expression level of nearby genes changes in response to the infection. These therefore provide an indication of the genetic basis of differential host responses. Together these results provide a comprehensive analysis of the host transcriptional response to this under-studied pathogen, providing clues as to the mechanisms underlying natural tolerance to the disease.
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Affiliation(s)
- M Chepkwony
- Centre for Tropical Livestock Genetics and Health (CTLGH), ILRI Kenya, P.O. Box 30709, Nairobi 00100, Kenya
| | - D Wragg
- Centre for Tropical Livestock Genetics and Health (CTLGH), Easter Bush Campus, EH25 9RG, UK
| | - P Latré de Laté
- Centre for Tropical Livestock Genetics and Health (CTLGH), ILRI Kenya, P.O. Box 30709, Nairobi 00100, Kenya
| | - E Paxton
- Centre for Tropical Livestock Genetics and Health (CTLGH), Easter Bush Campus, EH25 9RG, UK
| | - E Cook
- Centre for Tropical Livestock Genetics and Health (CTLGH), ILRI Kenya, P.O. Box 30709, Nairobi 00100, Kenya
| | - G Ndambuki
- Centre for Tropical Livestock Genetics and Health (CTLGH), ILRI Kenya, P.O. Box 30709, Nairobi 00100, Kenya
| | - P Kitala
- College of Agriculture and Veterinary Sciences (CAVS), University of Nairobi, P.O. Box 29053-00624, Kangemi, Nairobi, Kenya
| | - P Gathura
- College of Agriculture and Veterinary Sciences (CAVS), University of Nairobi, P.O. Box 29053-00624, Kangemi, Nairobi, Kenya
| | - P Toye
- Centre for Tropical Livestock Genetics and Health (CTLGH), ILRI Kenya, P.O. Box 30709, Nairobi 00100, Kenya.
| | - J Prendergast
- Centre for Tropical Livestock Genetics and Health (CTLGH), Easter Bush Campus, EH25 9RG, UK.
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Wragg D, Cook EAJ, Latré de Laté P, Sitt T, Hemmink JD, Chepkwony MC, Njeru R, Poole EJ, Powell J, Paxton EA, Callaby R, Talenti A, Miyunga AA, Ndambuki G, Mwaura S, Auty H, Matika O, Hassan M, Marshall K, Connelley T, Morrison LJ, Bronsvoort BMD, Morrison WI, Toye PG, Prendergast JGD. A locus conferring tolerance to Theileria infection in African cattle. PLoS Genet 2022; 18:e1010099. [PMID: 35446841 PMCID: PMC9022807 DOI: 10.1371/journal.pgen.1010099] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/24/2021] [Accepted: 02/14/2022] [Indexed: 12/30/2022] Open
Abstract
East Coast fever, a tick-borne cattle disease caused by the Theileria parva parasite, is among the biggest natural killers of cattle in East Africa, leading to over 1 million deaths annually. Here we report on the genetic analysis of a cohort of Bos indicus (Boran) cattle demonstrating heritable tolerance to infection with T. parva (h2 = 0.65, s.e. 0.57). Through a linkage analysis we identify a 6 Mb genomic region on bovine chromosome 15 that is significantly associated with survival outcome following T. parva exposure. Testing this locus in an independent cohort of animals replicates this association with survival following T. parva infection. A stop gained variant in a paralogue of the FAF1 gene in this region was found to be highly associated with survival across both related and unrelated animals, with only one of the 20 homozygote carriers (T/T) of this change succumbing to the disease in contrast to 44 out of 97 animals homozygote for the reference allele (C/C). Consequently, we present a genetic locus linked to tolerance of one of Africa’s most important cattle diseases, raising the promise of marker-assisted selection for cattle that are less susceptible to infection by T. parva. More than a million cattle die of East Coast fever in Africa each year, the impact of which disproportionately falls onto low-income, smallholder farmers. The lack of a widely accessible vaccine, heavy reliance on chemicals to control the tick vector and inadequate drug treatments means that new approaches for controlling the disease are urgently required. Through a genetic study of an extended pedigree of Boran cattle that are more than three times less likely to succumb to the disease than matched controls, we identify a region on chromosome 15 of the cattle genome associated with a high level of tolerance to the disease. We show that a nonsense variant in a predicted paralogue of FAS-associated factor 1 (FAF1) in this region is also associated with survival in an independent cohort, and is linked to rates of cell expansion during infection. This genetic variant can therefore support marker-assisted selection, allowing farmers to breed tolerant cattle and offers a route to introduce this beneficial DNA to non-native breeds, enabling reduced disease incidence and increased productivity, which would be of benefit to millions of rural smallholder farmers across Africa.
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Affiliation(s)
- David Wragg
- Centre for Tropical Livestock Genetics and Health (CTLGH), Easter Bush Campus, Edinburgh, United Kingdom
- The Roslin Institute, University of Edinburgh, Edinburgh, United Kingdom
| | - Elizabeth A. J. Cook
- Centre for Tropical Livestock Genetics and Health (CTLGH), ILRI Kenya, Nairobi, Kenya
- ILRI Kenya, Nairobi, Kenya
| | - Perle Latré de Laté
- Centre for Tropical Livestock Genetics and Health (CTLGH), ILRI Kenya, Nairobi, Kenya
- ILRI Kenya, Nairobi, Kenya
| | | | - Johanneke D. Hemmink
- Centre for Tropical Livestock Genetics and Health (CTLGH), Easter Bush Campus, Edinburgh, United Kingdom
- The Roslin Institute, University of Edinburgh, Edinburgh, United Kingdom
- Centre for Tropical Livestock Genetics and Health (CTLGH), ILRI Kenya, Nairobi, Kenya
- ILRI Kenya, Nairobi, Kenya
| | | | - Regina Njeru
- Centre for Tropical Livestock Genetics and Health (CTLGH), ILRI Kenya, Nairobi, Kenya
- ILRI Kenya, Nairobi, Kenya
| | | | - Jessica Powell
- The Roslin Institute, University of Edinburgh, Edinburgh, United Kingdom
| | - Edith A. Paxton
- The Roslin Institute, University of Edinburgh, Edinburgh, United Kingdom
| | - Rebecca Callaby
- The Roslin Institute, University of Edinburgh, Edinburgh, United Kingdom
- The Epidemiology, Economics and Risk Assessment (EEA) Group, Easter Bush Campus, Edinburgh, United Kingdom
| | - Andrea Talenti
- The Roslin Institute, University of Edinburgh, Edinburgh, United Kingdom
| | - Antoinette A. Miyunga
- Centre for Tropical Livestock Genetics and Health (CTLGH), ILRI Kenya, Nairobi, Kenya
- ILRI Kenya, Nairobi, Kenya
| | - Gideon Ndambuki
- Centre for Tropical Livestock Genetics and Health (CTLGH), ILRI Kenya, Nairobi, Kenya
- ILRI Kenya, Nairobi, Kenya
| | | | - Harriet Auty
- Institute of Biodiversity Animal Health & Comparative Medicine, College of Medical, Veterinary & Life Sciences, University of Glasgow, Glasgow, United Kingdom
| | - Oswald Matika
- The Roslin Institute, University of Edinburgh, Edinburgh, United Kingdom
| | - Musa Hassan
- Centre for Tropical Livestock Genetics and Health (CTLGH), Easter Bush Campus, Edinburgh, United Kingdom
- The Roslin Institute, University of Edinburgh, Edinburgh, United Kingdom
| | - Karen Marshall
- Centre for Tropical Livestock Genetics and Health (CTLGH), ILRI Kenya, Nairobi, Kenya
- ILRI Kenya, Nairobi, Kenya
| | - Timothy Connelley
- Centre for Tropical Livestock Genetics and Health (CTLGH), Easter Bush Campus, Edinburgh, United Kingdom
- The Roslin Institute, University of Edinburgh, Edinburgh, United Kingdom
| | - Liam J. Morrison
- Centre for Tropical Livestock Genetics and Health (CTLGH), Easter Bush Campus, Edinburgh, United Kingdom
- The Roslin Institute, University of Edinburgh, Edinburgh, United Kingdom
| | - B. Mark deC. Bronsvoort
- Centre for Tropical Livestock Genetics and Health (CTLGH), Easter Bush Campus, Edinburgh, United Kingdom
- The Roslin Institute, University of Edinburgh, Edinburgh, United Kingdom
| | - W. Ivan Morrison
- Centre for Tropical Livestock Genetics and Health (CTLGH), Easter Bush Campus, Edinburgh, United Kingdom
- The Roslin Institute, University of Edinburgh, Edinburgh, United Kingdom
| | - Philip G. Toye
- Centre for Tropical Livestock Genetics and Health (CTLGH), ILRI Kenya, Nairobi, Kenya
- ILRI Kenya, Nairobi, Kenya
- * E-mail: (PGT); (JGDP)
| | - James G. D. Prendergast
- Centre for Tropical Livestock Genetics and Health (CTLGH), Easter Bush Campus, Edinburgh, United Kingdom
- The Roslin Institute, University of Edinburgh, Edinburgh, United Kingdom
- * E-mail: (PGT); (JGDP)
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Latre de Late P, Cook EAJ, Wragg D, Poole EJ, Ndambuki G, Miyunga AA, Chepkwony MC, Mwaura S, Ndiwa N, Prettejohn G, Sitt T, Van Aardt R, Morrison WI, Prendergast JGD, Toye P. Inherited Tolerance in Cattle to the Apicomplexan Protozoan Theileria parva is Associated with Decreased Proliferation of Parasite-Infected Lymphocytes. Front Cell Infect Microbiol 2021; 11:751671. [PMID: 34804994 PMCID: PMC8602341 DOI: 10.3389/fcimb.2021.751671] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2021] [Accepted: 09/27/2021] [Indexed: 11/18/2022] Open
Abstract
Theileria parva is the causative agent of East Coast fever and Corridor disease, which are fatal, economically important diseases of cattle in eastern, central and southern Africa. Improved methods of control of the diseases are urgently required. The parasite transforms host lymphocytes, resulting in a rapid, clonal expansion of infected cells. Resistance to the disease has long been reported in cattle from T. parva-endemic areas. We reveal here that first- and second-generation descendants of a single Bos indicus bull survived severe challenge with T. parva, (overall survival rate 57.3% compared to 8.7% for unrelated animals) in a series of five field studies. Tolerant cattle displayed a delayed and less severe parasitosis and febrile response than unrelated animals. The in vitro proliferation of cells from surviving cattle was much reduced compared to those from animals that succumbed to infection. Additionally, some pro-inflammatory cytokines such as IL1β, IL6, TNFα or TGFβ which are usually strongly expressed in susceptible animals and are known to regulate cell growth or motility, remain low in tolerant animals. This correlates with the reduced proliferation and less severe clinical reactions observed in tolerant cattle. The results show for the first time that the inherited tolerance to T. parva is associated with decreased proliferation of infected lymphocytes. The results are discussed in terms of whether the reduced proliferation is the result of a perturbation of the transformation mechanism induced in infected cells or is due to an innate immune response present in the tolerant cattle.
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Affiliation(s)
- Perle Latre de Late
- International Livestock Research Institute (ILRI), Nairobi, Kenya.,Centre for Tropical Livestock Genetics and Health, Nairobi, Kenya
| | - Elizabeth A J Cook
- International Livestock Research Institute (ILRI), Nairobi, Kenya.,Centre for Tropical Livestock Genetics and Health, Nairobi, Kenya
| | - David Wragg
- The Roslin Institute, University of Edinburgh, Edinburgh, United Kingdom.,Centre for Tropical Livestock Genetics and Health, Edinburgh, United Kingdom
| | - E Jane Poole
- International Livestock Research Institute (ILRI), Nairobi, Kenya
| | - Gideon Ndambuki
- International Livestock Research Institute (ILRI), Nairobi, Kenya.,Centre for Tropical Livestock Genetics and Health, Nairobi, Kenya
| | - Antoinette Aluoch Miyunga
- International Livestock Research Institute (ILRI), Nairobi, Kenya.,Centre for Tropical Livestock Genetics and Health, Nairobi, Kenya
| | - Maurine C Chepkwony
- International Livestock Research Institute (ILRI), Nairobi, Kenya.,Centre for Tropical Livestock Genetics and Health, Nairobi, Kenya
| | - Stephen Mwaura
- International Livestock Research Institute (ILRI), Nairobi, Kenya
| | - Nicholas Ndiwa
- International Livestock Research Institute (ILRI), Nairobi, Kenya
| | | | - Tatjana Sitt
- International Livestock Research Institute (ILRI), Nairobi, Kenya
| | | | - W Ivan Morrison
- The Roslin Institute, University of Edinburgh, Edinburgh, United Kingdom
| | - James G D Prendergast
- The Roslin Institute, University of Edinburgh, Edinburgh, United Kingdom.,Centre for Tropical Livestock Genetics and Health, Edinburgh, United Kingdom
| | - Philip Toye
- International Livestock Research Institute (ILRI), Nairobi, Kenya.,Centre for Tropical Livestock Genetics and Health, Nairobi, Kenya
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5
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Cook EAJ, Sitt T, Poole EJ, Ndambuki G, Mwaura S, Chepkwony MC, Latre de Late P, Miyunga AA, van Aardt R, Prettejohn G, Wragg D, Prendergast JGD, Morrison WI, Toye P. Clinical Evaluation of Corridor Disease in Bos indicus (Boran) Cattle Naturally Infected With Buffalo-Derived Theileria parva. Front Vet Sci 2021; 8:731238. [PMID: 34660767 PMCID: PMC8511504 DOI: 10.3389/fvets.2021.731238] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2021] [Accepted: 08/25/2021] [Indexed: 11/17/2022] Open
Abstract
Corridor disease (CD) is a fatal condition of cattle caused by buffalo-derived Theileria parva. Unlike the related condition, East Coast fever, which results from infection with cattle-derived T. parva, CD has not been extensively studied. We describe in detail the clinical and laboratory findings in cattle naturally infected with buffalo-derived T. parva. Forty-six cattle were exposed to buffalo-derived T. parva under field conditions at the Ol Pejeta Conservancy, Kenya, between 2013 and 2018. The first signs of disease observed in all animals were nasal discharge (mean day of onset was 9 days post-exposure), enlarged lymph nodes (10 days post-exposure), and pyrexia (13.7 days post-exposure). Coughing and labored breathing were observed in more than 50% of animals (14 days post-exposure). Less commonly observed signs, corneal edema (22%) and diarrhea (11%), were observed later in the disease progression (19 days post-exposure). All infections were considered clinically severe, and 42 animals succumbed to infection. The mean time to death across all studies was 18.4 days. The mean time from onset of clinical signs to death was 9 days and from pyrexia to death was 4.8 days, indicating a relatively short duration of clinical illness. There were significant relationships between days to death and the days to first temperature (chi2 = 4.00, p = 0.046), and days to peak temperature (chi2 = 25.81, p = 0.001), animals with earlier onset pyrexia died sooner. These clinical indicators may be useful for assessing the severity of disease in the future. All infections were confirmed by the presence of macroschizonts in lymph node biopsies (mean time to parasitosis was 11 days). Piroplasms were detected in the blood of two animals (4%) and 20 (43%) animals seroconverted. In this study, we demonstrate the successful approach to an experimental field study for CD in cattle. We also describe the clinical progression of CD in naturally infected cattle, including the onset and severity of clinical signs and pathology. Laboratory diagnoses based on examination of blood samples are unreliable, and alternatives may not be available to cattle keepers. The rapid development of CD requires recognition of the clinical signs, which may be useful for early diagnosis of the disease and effective intervention for affected animals.
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Affiliation(s)
- Elizabeth A. J. Cook
- Livestock Genetics, International Livestock Research Institute (ILRI), Nairobi, Kenya
- Centre for Tropical Livestock Genetics and Health (CTLGH), International Livestock Research Insitute (ILRI) Kenya, Nairobi, Kenya
| | - Tatjana Sitt
- Livestock Genetics, International Livestock Research Institute (ILRI), Nairobi, Kenya
| | - E. Jane Poole
- Livestock Genetics, International Livestock Research Institute (ILRI), Nairobi, Kenya
| | - Gideon Ndambuki
- Livestock Genetics, International Livestock Research Institute (ILRI), Nairobi, Kenya
| | - Stephen Mwaura
- Livestock Genetics, International Livestock Research Institute (ILRI), Nairobi, Kenya
| | - Maurine C. Chepkwony
- Livestock Genetics, International Livestock Research Institute (ILRI), Nairobi, Kenya
- Centre for Tropical Livestock Genetics and Health (CTLGH), International Livestock Research Insitute (ILRI) Kenya, Nairobi, Kenya
| | - Perle Latre de Late
- Livestock Genetics, International Livestock Research Institute (ILRI), Nairobi, Kenya
- Centre for Tropical Livestock Genetics and Health (CTLGH), International Livestock Research Insitute (ILRI) Kenya, Nairobi, Kenya
| | - Antoinette A. Miyunga
- Livestock Genetics, International Livestock Research Institute (ILRI), Nairobi, Kenya
| | | | | | - David Wragg
- The Roslin Institute, University of Edinburgh, Easter Bush Campus, Roslin, United Kingdom
- Centre for Tropical Livestock Genetics and Health (CTLGH), Easter Bush Campus, Roslin, United Kingdom
| | - James G. D. Prendergast
- The Roslin Institute, University of Edinburgh, Easter Bush Campus, Roslin, United Kingdom
- Centre for Tropical Livestock Genetics and Health (CTLGH), Easter Bush Campus, Roslin, United Kingdom
| | - W. Ivan Morrison
- The Roslin Institute, University of Edinburgh, Easter Bush Campus, Roslin, United Kingdom
| | - Philip Toye
- Livestock Genetics, International Livestock Research Institute (ILRI), Nairobi, Kenya
- Centre for Tropical Livestock Genetics and Health (CTLGH), International Livestock Research Insitute (ILRI) Kenya, Nairobi, Kenya
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Sitt T, Poole EJ, Ndambuki G, Mwaura S, Njoroge T, Omondi GP, Mutinda M, Mathenge J, Prettejohn G, Morrison WI, Toye P. Corrigendum to "Exposure of vaccinated and naive cattle to natural challenge from buffalo-derived Theileria parva" [Int. J. Parasitol. Parasites Wildl. 4(2) (2015) 244-251]. Int J Parasitol Parasites Wildl 2018; 6:219. [PMID: 29988829 PMCID: PMC6031956 DOI: 10.1016/j.ijppaw.2017.07.007] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Affiliation(s)
- Tatjana Sitt
- International Livestock Research Institute (ILRI), P.O. Box 30709, Nairobi, 00100, Kenya
| | - E Jane Poole
- International Livestock Research Institute (ILRI), P.O. Box 30709, Nairobi, 00100, Kenya
| | - Gideon Ndambuki
- International Livestock Research Institute (ILRI), P.O. Box 30709, Nairobi, 00100, Kenya
| | - Stephen Mwaura
- International Livestock Research Institute (ILRI), P.O. Box 30709, Nairobi, 00100, Kenya
| | - Thomas Njoroge
- International Livestock Research Institute (ILRI), P.O. Box 30709, Nairobi, 00100, Kenya
| | | | - Matthew Mutinda
- Veterinary Services Department, Kenya Wildlife Service, P.O. Box 40241-00100, Nairobi, Kenya
| | | | | | - W Ivan Morrison
- The Roslin Institute, The University of Edinburgh, Midlothian, EH25 9RG, Scotland, UK
| | - Philip Toye
- International Livestock Research Institute (ILRI), P.O. Box 30709, Nairobi, 00100, Kenya
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Onzere CK, Bastos AD, Okoth EA, Lichoti JK, Bochere EN, Owido MG, Ndambuki G, Bronsvoort M, Bishop RP. Multi-locus sequence typing of African swine fever viruses from endemic regions of Kenya and Eastern Uganda (2011-2013) reveals rapid B602L central variable region evolution. Virus Genes 2018; 54:111-123. [PMID: 29143187 PMCID: PMC5847163 DOI: 10.1007/s11262-017-1521-4] [Citation(s) in RCA: 25] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2017] [Accepted: 11/07/2017] [Indexed: 11/28/2022]
Abstract
The central variable region (CVR) within the B602L gene of the African swine fever virus (ASFV) is highly polymorphic within the 23 ASFV genotypes defined by sequencing of the C-terminal end of the p72 locus. Sequencing the p54 gene further discriminates ASFV genotypes that are conserved at the p72 locus. Variation in the thymidine kinase locus is a novel additional tool for ASFV genotyping whose application for this purpose is described for the first time herein. We evaluated genetic variation at these four polymorphic loci in 39 ASFV isolates obtained from outbreaks in Kenya and a region of Eastern Uganda between 2011 and 2013. Analysis of the p72 and p54 loci revealed high genetic conservation among these isolates; all clustered within p72 genotype IX and were similar to isolates associated with earlier outbreaks in East Africa. The thymidine kinase gene of the Kenyan isolates in this study were distinct relative to Southern African isolates and synonymous substitutions were observed among viruses from central Kenya. Analysis of the CVR within the B602L gene revealed two previously unknown polymorphisms that were restricted to Western Kenya and Eastern Uganda. A novel variant was revealed within CVR subgroup XXIV and a novel CVR subgroup XXIVa that contains tetrameric repeat F which has previously only been associated with p72 genotype I, was also identified for the first time in East Africa. Phylogeographic analysis of isolates based on CVR polymorphisms revealed rapid evolution and dissemination of variants present within ASFV genotype IX in East Africa.
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Affiliation(s)
- C. K. Onzere
- International Livestock Research Institute (ILRI), PO Box 30709, Nairobi, 00100 Kenya
- College of Medicine and Veterinary Medicine, University of Edinburgh, The Chancellor’s Building, 49 Little France Crescent, Edinburgh, EH16 4S Scotland, UK
| | - A. D. Bastos
- Department of Zoology and Entomology, Mammal Research Institute, University of Pretoria, Private Bag 20, Hatfield, 0028 South Africa
| | - E. A. Okoth
- International Livestock Research Institute (ILRI), PO Box 30709, Nairobi, 00100 Kenya
| | - J. K. Lichoti
- State Department of Veterinary Services, Ministry of Agriculture, Livestock and Fisheries, Private Bag-00625, Nairobi, Kenya
| | - E. N. Bochere
- International Livestock Research Institute (ILRI), PO Box 30709, Nairobi, 00100 Kenya
| | - M. G. Owido
- International Livestock Research Institute (ILRI), PO Box 30709, Nairobi, 00100 Kenya
| | - G. Ndambuki
- International Livestock Research Institute (ILRI), PO Box 30709, Nairobi, 00100 Kenya
| | - M. Bronsvoort
- College of Medicine and Veterinary Medicine, University of Edinburgh, The Chancellor’s Building, 49 Little France Crescent, Edinburgh, EH16 4S Scotland, UK
| | - R. P. Bishop
- International Livestock Research Institute (ILRI), PO Box 30709, Nairobi, 00100 Kenya
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Sitt T, Poole EJ, Ndambuki G, Mwaura S, Njoroge T, Omondi GP, Mutinda M, Mathenge J, Prettejohn G, Morrison WI, Toye P. Exposure of vaccinated and naive cattle to natural challenge from buffalo-derived Theileria parva. Int J Parasitol Parasites Wildl 2015; 4:244-51. [PMID: 26005635 PMCID: PMC4437466 DOI: 10.1016/j.ijppaw.2015.04.006] [Citation(s) in RCA: 36] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/17/2015] [Revised: 04/29/2015] [Accepted: 04/30/2015] [Indexed: 12/02/2022]
Abstract
The Muguga cocktail was tested in cattle in a buffalo-only location. Infection with buffalo-derived T. parva caused Corridor disease in cattle. At the conservancy, the cocktail did not protect cattle against Corridor disease. Efficacious vaccines can support integrative livestock/wildlife management.
Integrative management of wildlife and livestock requires a clear understanding of the diseases transmitted between the two populations. The tick-borne protozoan parasite Theileria parva causes two distinct diseases in cattle, East Coast fever and Corridor disease, following infection with parasites derived from cattle or buffalo, respectively. In this study, cattle were immunized with a live sporozoite vaccine containing three T. parva isolates (the Muguga cocktail), which has been used extensively and successfully in the field to protect against cattle-derived T. parva infection. The cattle were exposed in a natural field challenge site containing buffalo but no other cattle. The vaccine had no effect on the survival outcome in vaccinated animals compared to unvaccinated controls: nine out of the 12 cattle in each group succumbed to T. parva infection. The vaccine also had no effect on the clinical course of the disease. A combination of clinical and post mortem observations and laboratory analyses confirmed that the animals died of Corridor disease. The results clearly indicate that the Muguga cocktail vaccine does not provide protection against buffalo-derived T. parva at this site and highlight the need to evaluate the impact of the composition of challenge T. parva populations on vaccine success in areas where buffalo and cattle are present.
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Affiliation(s)
- Tatjana Sitt
- International Livestock Research Institute (ILRI), P.O. Box 30709, Nairobi 00100, Kenya
| | - E Jane Poole
- International Livestock Research Institute (ILRI), P.O. Box 30709, Nairobi 00100, Kenya
| | - Gideon Ndambuki
- International Livestock Research Institute (ILRI), P.O. Box 30709, Nairobi 00100, Kenya
| | - Stephen Mwaura
- International Livestock Research Institute (ILRI), P.O. Box 30709, Nairobi 00100, Kenya
| | - Thomas Njoroge
- International Livestock Research Institute (ILRI), P.O. Box 30709, Nairobi 00100, Kenya
| | | | - Matthew Mutinda
- Veterinary Services Department, Kenya Wildlife Service, P.O. Box 40241-00100, Nairobi, Kenya
| | - Joseph Mathenge
- Veterinary Services Department, Kenya Wildlife Service, P.O. Box 40241-00100, Nairobi, Kenya
| | - Giles Prettejohn
- Veterinary Services Department, Kenya Wildlife Service, P.O. Box 40241-00100, Nairobi, Kenya
| | - W Ivan Morrison
- The Roslin Institute, The University of Edinburgh, Midlothian EH25 9RG, UK
| | - Philip Toye
- International Livestock Research Institute (ILRI), P.O. Box 30709, Nairobi 00100, Kenya
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