Madagascar’s extraordinary biodiversity: Evolution, distribution, and use

Madagascar’s biota is hyperdiverse and includes exceptional levels of endemicity. We review the current state of knowledge on Madagascar’s past and current terrestrial and freshwater biodiversity by compiling and presenting comprehensive data on species diversity, endemism, and rates of species description and human uses, in addition to presenting an updated and simplified map of vegetation types. We report a substantial increase of records and species new to science in recent years; however, the diversity and evolution of many groups remain practically unknown (e.g., fungi and most invertebrates). Digitization efforts are increasing the resolution of species richness patterns and we highlight the crucial role of field- and collections-based research for advancing biodiversity knowledge and identifying gaps in our understanding, particularly as species richness corresponds closely to collection effort. Phylogenetic diversity patterns mirror that of species richness and endemism in most of the analyzed groups. We highlight humid forests as centers of diversity and endemism because of their role as refugia and centers of recent and rapid radiations. However, the distinct endemism of other areas, such as the grassland-woodland mosaic of the Central Highlands and the spiny forest of the southwest, is also biologically important despite lower species richness. The documented uses of Malagasy biodiversity are manifold, with much potential for the uncovering of new useful traits for food, medicine, and climate mitigation. The data presented here showcase Madagascar as a unique “living laboratory” for our understanding of evolution and the complex interactions between people and nature. The gathering and analysis of biodiversity data must continue and accelerate if we are to fully understand and safeguard this unique subset of Earth’s biodiversity.

Madagascar’s extraordinary biodiversity: Threats and opportunities

Madagascar’s unique biota is heavily affected by human activity and is under intense threat. Here, we review the current state of knowledge on the conservation status of Madagascar’s terrestrial and freshwater biodiversity by presenting data and analyses on documented and predicted species-level conservation statuses, the most prevalent and relevant threats, ex situ collections and programs, and the coverage and comprehensiveness of protected areas. The existing terrestrial protected area network in Madagascar covers 10.4% of its land area and includes at least part of the range of the majority of described native species of vertebrates with known distributions (97.1% of freshwater fishes, amphibians, reptiles, birds, and mammals combined) and plants (67.7%). The overall figures are higher for threatened species (97.7% of threatened vertebrates and 79.6% of threatened plants occurring within at least one protected area). International Union for Conservation of Nature (IUCN) Red List assessments and Bayesian neural network analyses for plants identify overexploitation of biological resources and unsustainable agriculture as the most prominent threats to biodiversity. We highlight five opportunities for action at multiple levels to ensure that conservation and ecological restoration objectives, programs, and activities take account of complex underlying and interacting factors and produce tangible benefits for the biodiversity and people of Madagascar.

Madagascar's fire regimes challenge global assumptions about landscape degradation

Narratives of landscape degradation are often linked to unsustainable fire use by local communities. Madagascar is a case in point: the island is considered globally exceptional, with its remarkable endemic biodiversity viewed as threatened by unsustainable anthropogenic fire. Yet, fire regimes on Madagascar have not been empirically characterised or globally contextualised. Here, we contribute a comparative approach to determining relationships between regional fire regimes and global patterns and trends, applied to Madagascar using MODIS remote sensing data (2003-2019). Rather than a global exception, we show that Madagascar's fire regimes are similar to 88% of tropical burned area with shared climate and vegetation characteristics, and can be considered a microcosm of most tropical fire regimes. From 2003-2019, landscape-scale fire declined across tropical grassy biomes (17%-44% excluding Madagascar), and on Madagascar at a relatively fast rate (36%-46%). Thus, high tree loss anomalies on the island (1.25-4.77× the tropical average) were not explained by any general expansion of landscape-scale fire in grassy biomes. Rather, tree loss anomalies centred in forests, and could not be explained by landscape-scale fire escaping from savannas into forests. Unexpectedly, the highest tree loss anomalies on Madagascar (4.77×) occurred in environments without landscape-scale fire, where the role of small-scale fires (<21 h [0.21 km² ]) is unknown. While landscape-scale fire declined across tropical grassy biomes, trends in tropical forests reflected important differences among regions, indicating a need to better understand regional variation in the anthropogenic drivers of forest loss and fire risk. Our new understanding of Madagascar's fire regimes offers two lessons with global implications: first, landscape-scale fire is declining across tropical grassy biomes and does not explain high tree loss anomalies on Madagascar. Second, landscape-scale fire is not uniformly associated with tropical forest loss, indicating a need for socio-ecological context in framing new narratives of fire and ecosystem degradation.

Mapping past human land use using archaeological data: A new classification for global land use synthesis and data harmonization

In the 12,000 years preceding the Industrial Revolution, human activities led to significant changes in land cover, plant and animal distributions, surface hydrology, and biochemical cycles. Earth system models suggest that this anthropogenic land cover change influenced regional and global climate. However, the representation of past land use in earth system models is currently oversimplified. As a result, there are large uncertainties in the current understanding of the past and current state of the earth system. In order to improve representation of the variety and scale of impacts that past land use had on the earth system, a global effort is underway to aggregate and synthesize archaeological and historical evidence of land use systems. Here we present a simple, hierarchical classification of land use systems designed to be used with archaeological and historical data at a global scale and a schema of codes that identify land use practices common to a range of systems, both implemented in a geospatial database. The classification scheme and database resulted from an extensive process of consultation with researchers worldwide. Our scheme is designed to deliver consistent, empirically robust data for the improvement of land use models, while simultaneously allowing for a comparative, detailed mapping of land use relevant to the needs of historical scholars. To illustrate the benefits of the classification scheme and methods for mapping historical land use, we apply it to Mesopotamia and Arabia at 6 kya (c. 4000 BCE). The scheme will be used to describe land use by the Past Global Changes (PAGES) LandCover6k working group, an international project comprised of archaeologists, historians, geographers, paleoecologists, and modelers. Beyond this, the scheme has a wide utility for creating a common language between research and policy communities, linking archaeologists with climate modelers, biodiversity conservation workers and initiatives.

Land use for animal production in global change studies: Defining and characterizing a framework

Land use for animal production influences the earth system in a variety of ways, including local-scale modification to biodiversity, soils, and nutrient cycling; regional changes in albedo and hydrology; and global-scale changes in greenhouse gas and aerosol concentrations. Pasture is furthermore the single most extensive form of land cover, currently comprising about 22-26% of the earth's ice-free land surface. Despite the importance and variable expressions of animal production, distinctions among different systems are effectively absent from studies of land use and land cover change. This deficiency is improving; however, livestock production system classifications are rarely applied in this context, and the most popular global land cover inventories still present only a single, usually poorly defined category of "pasture" or "rangeland" with no characterization of land use. There is a marked lack of bottom-up, evidence-based methodology, creating a pressing need to incorporate cross-disciplinary evidence of past and present animal production systems into global change studies. Here, we present a framework, modified from existing livestock production systems, that is rooted in sociocultural, socioeconomic, and ecological contexts. The framework defines and characterizes the range of land usage pertaining to animal production, and is suitable for application in land use inventories and scenarios, land cover modeling, and studies on sustainable land use in the past, present, and future.

Serological grouping of virulent and avirulent strains of the lobster pathogen Aerococcus viridans

Virulent strains of Aerococcus viridans (formerly Gaffkya homari) are the aetiologic agents of gaffkemia, a septicaemic disease of the American lobster (Homarus americanus). The virulent and avirulent forms of this bacterium, previously thought to be taxonomically indistinguishable, have been differentiated by serological studies. Antisera were produced in rabbits using autoclaved bacteria as antigens. Reactions were measured by agglutination tests using microtitre techniques and an antigenic scheme was determined. Specific antisera were prepared by absorption and used to determine antigens of strains of A. viridans and other Gram-positive cocci. In general, only virulent strains of A. viridans have antigen b. Both virulent and avirulent strains possess other antigens also detected in strains of the genus Staphylococcus.