1
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Pausta CM, Kalbar P, Saroj D. Life cycle assessment of nutrient recovery strategies from domestic wastewaters to quantify environmental performance and identification of trade-offs. Sci Rep 2024; 14:3678. [PMID: 38355901 PMCID: PMC10867002 DOI: 10.1038/s41598-024-54060-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2023] [Accepted: 02/08/2024] [Indexed: 02/16/2024] Open
Abstract
Increase in anthropogenic activities proliferated the consumption of resources such as phosphorus; and increase the adverse environmental impacts especially eutrophication on water resources such as lakes. Nutrient recovery from domestic wastewaters to produce a fertiliser has been explored to address these challenges in the context of a sustainable circular nutrient economy. Life cycle assessment (LCA) was performed to holistically assess the impacts of integrating a nutrient recovery system on wastewater and water resource management using Laguna de Bay, Philippines as the geographical boundary. The inventory was developed based on the results of the emerging nutrient recovery reactor operations and the application of the recovered fertiliser on the agricultural crops. The LCA results for the proposed scenario showed environmental benefits of about 83.6% freshwater eutrophication, 102.5% terrestrial ecotoxicity, 26.9% water consumption, 100.7% mineral resource scarcity, while the global warming potential is 95.4% higher than the baseline scenario. Results imply policy review for septage management, system optimisation, and evaluation of alternative methods of wastewater management, in terms of life cycle thinking and sustainability across the globe.
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Affiliation(s)
- Carla Mae Pausta
- Centre for Environmental Health and Engineering (CEHE), School of Sustainability, Civil and Environmental Engineering, University of Surrey, Guildford, GU2 7XH, UK
| | - Pradip Kalbar
- Centre for Urban Science and Engineering (CUSE), Indian Institute of Technology Bombay, Powai, Mumbai, 400076, India
| | - Devendra Saroj
- Centre for Environmental Health and Engineering (CEHE), School of Sustainability, Civil and Environmental Engineering, University of Surrey, Guildford, GU2 7XH, UK.
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2
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Kor L, Fernández-Lucero M, Granados Flórez DA, Dawson TP, Diazgranados M. Bridging local and scientific knowledge for area-based conservation of useful plants in Colombia. Ambio 2024; 53:309-323. [PMID: 37828254 PMCID: PMC10774498 DOI: 10.1007/s13280-023-01921-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/23/2023] [Revised: 04/28/2023] [Accepted: 08/21/2023] [Indexed: 10/14/2023]
Abstract
While the importance of interdisciplinary approaches is increasingly recognised in conservation, bridging knowledge systems across scales remains a fundamental challenge. Focusing on the Important Plant Areas (IPA) approach, we evaluate how complementing scientific and local knowledge can better inform the conservation of useful plants in Colombia. We worked in three municipalities to investigate knowledge on useful plant richness, species composition and use types, as well as perceptions on area-based plant conservation approaches. Participatory focus groups and ethnobotanical walks-in-the-woods were undertaken with local communities, while scientific data were represented by occurrence records from global data aggregators and digitised collections. A total of 1190 species with human uses were reported. Combining knowledge systems provided the richest understanding of useful plants but the relative contribution of each system varied between study areas, influenced by the history of scientific studies, socio-ecological context and study design. Meanwhile, local perceptions of how conservation areas should be selected differed from global IPA criteria. These results show that working with local communities can improve biological understanding for spatial conservation planning. Additionally, participatory approaches must move beyond community-based conservation and data collection, to inform the design of global conservation programmes.
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Affiliation(s)
- Laura Kor
- Research Department, Royal Botanic Gardens, Kew, Richmond, TW9 3AE, UK
- Department of Geography, King's College London, Bush House NE, London, WC2B 4BG, UK
| | - Mateo Fernández-Lucero
- Instituto de Investigación de Recursos Biológicos Alexander von Humboldt, Villa de Leyva, Colombia
| | - Diego Arturo Granados Flórez
- Instituto de Investigación de Recursos Biológicos Alexander von Humboldt, Villa de Leyva, Colombia
- Grupo de Investigación MOPUB, Facultad de Artes, Universidad de Ciencia y Desarrollo UNICIENCIA, Bogotá, Colombia
| | - Terence P Dawson
- Department of Geography, King's College London, Bush House NE, London, WC2B 4BG, UK
| | - Mauricio Diazgranados
- Research Department, Royal Botanic Gardens, Kew, Richmond, TW9 3AE, UK.
- International Plant Science Center, The New York Botanical Garden, 2900 Southern Boulevard, Bronx, NY, 10458, USA.
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3
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Leek F, Anderson C, Robinson AP, Moss RM, Porter JC, Garthwaite HS, Groves AM, Hutton BF, Thielemans K. Optimisation of the air fraction correction for lung PET/CT: addressing resolution mismatch. EJNMMI Phys 2023; 10:77. [PMID: 38049611 PMCID: PMC10695904 DOI: 10.1186/s40658-023-00595-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/07/2023] [Accepted: 11/20/2023] [Indexed: 12/06/2023] Open
Abstract
BACKGROUND Increased pulmonary [Formula: see text]F-FDG metabolism in patients with idiopathic pulmonary fibrosis, and other forms of diffuse parenchymal lung disease, can predict measurements of health and lung physiology. To improve PET quantification, voxel-wise air fractions (AF) determined from CT can be used to correct for variable air content in lung PET/CT. However, resolution mismatches between PET and CT can cause artefacts in the AF-corrected image. METHODS Three methodologies for determining the optimal kernel to smooth the CT are compared with noiseless simulations and non-TOF MLEM reconstructions of a patient-realistic digital phantom: (i) the point source insertion-and-subtraction method, [Formula: see text]; (ii) AF-correcting with varyingly smoothed CT to achieve the lowest RMSE with respect to the ground truth (GT) AF-corrected volume of interest (VOI), [Formula: see text]; iii) smoothing the GT image to match the reconstruction within the VOI, [Formula: see text]. The methods were evaluated both using VOI-specific kernels, and a single global kernel optimised for the six VOIs combined. Furthermore, [Formula: see text] was implemented on thorax phantom data measured on two clinical PET/CT scanners with various reconstruction protocols. RESULTS The simulations demonstrated that at [Formula: see text] iterations (200 i), the kernel width was dependent on iteration number and VOI position in the lung. The [Formula: see text] method estimated a lower, more uniform, kernel width in all parts of the lung investigated. However, all three methods resulted in approximately equivalent AF-corrected VOI RMSEs (<10%) at [Formula: see text]200i. The insensitivity of AF-corrected quantification to kernel width suggests that a single global kernel could be used. For all three methodologies, the computed global kernel resulted in an AF-corrected lung RMSE <10% at [Formula: see text]200i, while larger lung RMSEs were observed for the VOI-specific kernels. The global kernel approach was then employed with the [Formula: see text] method on measured data. The optimally smoothed GT emission matched the reconstructed image well, both within the VOI and the lung background. VOI RMSE was <10%, pre-AFC, for all reconstructions investigated. CONCLUSIONS Simulations for non-TOF PET indicated that around 200i were needed to approach image resolution stability in the lung. In addition, at this iteration number, a single global kernel, determined from several VOIs, for AFC, performed well over the whole lung. The [Formula: see text] method has the potential to be used to determine the kernel for AFC from scans of phantoms on clinical scanners.
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Affiliation(s)
- Francesca Leek
- Institute of Nuclear Medicine, University College London Hospitals NHS Trust, London, UK.
- Nuclear Medicine Metrology, National Physical Laboratory, Teddington, UK.
| | - Cameron Anderson
- Institute of Nuclear Medicine, University College London Hospitals NHS Trust, London, UK
| | - Andrew P Robinson
- Nuclear Medicine Metrology, National Physical Laboratory, Teddington, UK
- Christie Medical Physics and Engineering, The Christie NHS Foundation Trust, Manchester, UK
- Schuster Laboratory, School of Physics and Astronomy, University of Manchester, Manchester, UK
| | - Robert M Moss
- Department of Medical Physics and Biomedical Engineering, University College London, London, UK
| | - Joanna C Porter
- UCL Respiratory, University College London and Interstitial Lung Disease Service, University College London Hospitals NHS Trust, London, UK
| | - Helen S Garthwaite
- UCL Respiratory, University College London and Interstitial Lung Disease Service, University College London Hospitals NHS Trust, London, UK
| | - Ashley M Groves
- Institute of Nuclear Medicine, University College London Hospitals NHS Trust, London, UK
| | - Brian F Hutton
- Institute of Nuclear Medicine, University College London Hospitals NHS Trust, London, UK
| | - Kris Thielemans
- Institute of Nuclear Medicine, University College London Hospitals NHS Trust, London, UK
- Centre for Medical Image Computing, University College London, London, UK
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4
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Wang Z, Zhou Y, Qiu P, Xia C, Fang W, Jin J, Huang L, Deng P, Su Y, Crespo-Otero R, Tian X, You B, Guo W, Di Tommaso D, Pang Y, Ding S, Xia BY. Advanced Catalyst Design and Reactor Configuration Upgrade in Electrochemical Carbon Dioxide Conversion. Adv Mater 2023; 35:e2303052. [PMID: 37589167 DOI: 10.1002/adma.202303052] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/02/2023] [Revised: 07/28/2023] [Indexed: 08/18/2023]
Abstract
Electrochemical carbon dioxide reduction reaction (CO2 RR) driven by renewable energy shows great promise in mitigating and potentially reversing the devastating effects of anthropogenic climate change and environmental degradation. The simultaneous synthesis of energy-dense chemicals can meet global energy demand while decoupling emissions from economic growth. However, the development of CO2 RR technology faces challenges in catalyst discovery and device optimization that hinder their industrial implementation. In this contribution, a comprehensive overview of the current state of CO2 RR research is provided, starting with the background and motivation for this technology, followed by the fundamentals and evaluated metrics. Then the underlying design principles of electrocatalysts are discussed, emphasizing their structure-performance correlations and advanced electrochemical assembly cells that can increase CO2 RR selectivity and throughput. Finally, the review looks to the future and identifies opportunities for innovation in mechanism discovery, material screening strategies, and device assemblies to move toward a carbon-neutral society.
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Affiliation(s)
- Zhitong Wang
- Key Laboratory of Material Chemistry for Energy Conversion and Storage (Ministry of Education), Hubei Key Laboratory of Material Chemistry and Service Failure, State Key Laboratory of Materials Processing and Die & Mould Technology, School of Chemistry and Chemical Engineering, Huazhong University of Science and Technology (HUST), 1037 Luoyu Rd, Wuhan, 430074, China
- School of Marine Science and Engineering, Hainan Provincial Key Lab of Fine Chemistry, School of Chemistry and Chemical Engineering, Hainan University, Haikou, 570228, China
| | - Yansong Zhou
- Key Laboratory of Material Chemistry for Energy Conversion and Storage (Ministry of Education), Hubei Key Laboratory of Material Chemistry and Service Failure, State Key Laboratory of Materials Processing and Die & Mould Technology, School of Chemistry and Chemical Engineering, Huazhong University of Science and Technology (HUST), 1037 Luoyu Rd, Wuhan, 430074, China
| | - Peng Qiu
- School of Optical and Electronic Information, Wuhan National Laboratory for Optoelectronics, Huazhong University of Science and Technology (HUST), 1037 Luoyu Road, Wuhan, 430074, China
| | - Chenfeng Xia
- Key Laboratory of Material Chemistry for Energy Conversion and Storage (Ministry of Education), Hubei Key Laboratory of Material Chemistry and Service Failure, State Key Laboratory of Materials Processing and Die & Mould Technology, School of Chemistry and Chemical Engineering, Huazhong University of Science and Technology (HUST), 1037 Luoyu Rd, Wuhan, 430074, China
| | - Wensheng Fang
- Key Laboratory of Material Chemistry for Energy Conversion and Storage (Ministry of Education), Hubei Key Laboratory of Material Chemistry and Service Failure, State Key Laboratory of Materials Processing and Die & Mould Technology, School of Chemistry and Chemical Engineering, Huazhong University of Science and Technology (HUST), 1037 Luoyu Rd, Wuhan, 430074, China
| | - Jian Jin
- School of Optical and Electronic Information, Wuhan National Laboratory for Optoelectronics, Huazhong University of Science and Technology (HUST), 1037 Luoyu Road, Wuhan, 430074, China
| | - Lei Huang
- Key Laboratory of Material Chemistry for Energy Conversion and Storage (Ministry of Education), Hubei Key Laboratory of Material Chemistry and Service Failure, State Key Laboratory of Materials Processing and Die & Mould Technology, School of Chemistry and Chemical Engineering, Huazhong University of Science and Technology (HUST), 1037 Luoyu Rd, Wuhan, 430074, China
| | - Peilin Deng
- School of Marine Science and Engineering, Hainan Provincial Key Lab of Fine Chemistry, School of Chemistry and Chemical Engineering, Hainan University, Haikou, 570228, China
| | - Yaqiong Su
- School of Chemistry, Xi'an Jiaotong University, 28 Xianning West Rd, Xi'an, 710049, China
| | - Rachel Crespo-Otero
- Department of Chemistry, University of College London, 20 Gordon Street, London, WC1H 0AJ, UK
| | - Xinlong Tian
- School of Marine Science and Engineering, Hainan Provincial Key Lab of Fine Chemistry, School of Chemistry and Chemical Engineering, Hainan University, Haikou, 570228, China
| | - Bo You
- Key Laboratory of Material Chemistry for Energy Conversion and Storage (Ministry of Education), Hubei Key Laboratory of Material Chemistry and Service Failure, State Key Laboratory of Materials Processing and Die & Mould Technology, School of Chemistry and Chemical Engineering, Huazhong University of Science and Technology (HUST), 1037 Luoyu Rd, Wuhan, 430074, China
| | - Wei Guo
- Key Laboratory of Material Chemistry for Energy Conversion and Storage (Ministry of Education), Hubei Key Laboratory of Material Chemistry and Service Failure, State Key Laboratory of Materials Processing and Die & Mould Technology, School of Chemistry and Chemical Engineering, Huazhong University of Science and Technology (HUST), 1037 Luoyu Rd, Wuhan, 430074, China
| | - Devis Di Tommaso
- School of Physical and Chemical Sciences, Queen Mary University of London, Mile End Road, London, E1 4NS, UK
| | - Yuanjie Pang
- School of Optical and Electronic Information, Wuhan National Laboratory for Optoelectronics, Huazhong University of Science and Technology (HUST), 1037 Luoyu Road, Wuhan, 430074, China
| | - Shujiang Ding
- School of Chemistry, Xi'an Jiaotong University, 28 Xianning West Rd, Xi'an, 710049, China
| | - Bao Yu Xia
- Key Laboratory of Material Chemistry for Energy Conversion and Storage (Ministry of Education), Hubei Key Laboratory of Material Chemistry and Service Failure, State Key Laboratory of Materials Processing and Die & Mould Technology, School of Chemistry and Chemical Engineering, Huazhong University of Science and Technology (HUST), 1037 Luoyu Rd, Wuhan, 430074, China
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5
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Whaley P, Wattam S, Bedford C, Bell N, Harrad S, Jones N, Kirkbride T, Naldzhiev D, Payne E, Wooding EJ, Hull TR. Reconciling chemical flame retardant exposure and fire risk in domestic furniture. PLoS One 2023; 18:e0293651. [PMID: 38019785 PMCID: PMC10686510 DOI: 10.1371/journal.pone.0293651] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2023] [Accepted: 10/17/2023] [Indexed: 12/01/2023] Open
Abstract
INTRODUCTION Evidence suggests that standards for resistance of furniture to ignition may lead to an increase in use of chemical flame retardants (CFRs). This is motivating the development of new approaches that maintain high levels of fire safety while facilitating a reduction in use of CFRs. However, reconciling potential fire risk with use of CFRs in relation to specific policy objectives is challenging. OBJECTIVES To inform the development of a new policy in the UK for the fire safety of furniture, we developed for domestic furniture quantitative models of fire risk and potential for CFR exposure. We then combined the models to determine if any lower fire risk, higher CFR exposure categories of furniture were identifiable. METHODS We applied a novel mixed-methods approach to modelling furniture fire risk and CFR exposure in a data-poor environment, using literature-based concept mapping, qualitative research, and data visualisation methods to generate fire risk and CFR exposure models and derive furniture product rankings. RESULTS Our analysis suggests there exists a cluster of furniture types including baby and infant products and pillows that have comparable overall properties in terms of lower fire risk and higher potential for CFR exposure. DISCUSSION There are multiple obstacles to reconciling fire risk and CFR use in furniture. In particular, these include a lack of empirical data that would allow absolute fire risk and exposure levels to be quantified. Nonetheless, it seems that our modelling method can potentially yield meaningful product clusters, providing a basis for further research.
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Affiliation(s)
- Paul Whaley
- Lancaster Environment Centre, Lancaster University, Lancaster, United Kingdom
- WhaleyResearch, Leuchars, Fife, United Kingdom
| | - Stephen Wattam
- W&P Academic Consultancy Limited, Northallerton, United Kingdom
| | - Clare Bedford
- Centre for Fire and Hazards Science, University of Central Lancashire, Preston, United Kingdom
| | - Nia Bell
- Oakdene Hollins, Aylesbury, United Kingdom
| | - Stuart Harrad
- School of Geography, Earth, and Environmental Sciences, University of Birmingham, Birmingham, United Kingdom
| | - Nicola Jones
- Centre for Fire and Hazards Science, University of Central Lancashire, Preston, United Kingdom
| | | | | | | | - Elli-Jo Wooding
- Centre for Fire and Hazards Science, University of Central Lancashire, Preston, United Kingdom
| | - T. Richard Hull
- Centre for Fire and Hazards Science, University of Central Lancashire, Preston, United Kingdom
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6
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Campbell S, Zoppi G, Bowen L, Maiello P, Barrioz V, Beattie NS, Qu Y. Enhanced Carrier Collection in Cd/In-Based Dual Buffers in Kesterite Thin-Film Solar Cells from Nanoparticle Inks. ACS Appl Energy Mater 2023; 6:10883-10896. [PMID: 38020741 PMCID: PMC10646902 DOI: 10.1021/acsaem.3c01622] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/30/2023] [Revised: 10/05/2023] [Accepted: 10/05/2023] [Indexed: 12/01/2023]
Abstract
Increasing the power conversion efficiency (PCE) of kesterite Cu2ZnSn(S,Se)4 (CZTSSe) solar cells has remained challenging over the past decade, in part due to open-circuit voltage (VOC)-limiting defect states at the absorber/buffer interface. Previously, we found that substituting the conventional CdS buffer layer with In2S3 in CZTSSe devices fabricated from nanoparticle inks produced an increase in the apparent doping density of the CZTSSe film and a higher built-in voltage arising from a more favorable energy-band alignment at the absorber/buffer interface. However, any associated gain in VOC was negated by the introduction of photoactive defects at the interface. This present study incorporates a hybrid Cd/In dual buffer in CZTSSe devices that demonstrate an average relative increase of 11.5% in PCE compared to CZTSSe devices with a standard CdS buffer. Current density-voltage analysis using a double-diode model revealed the presence of (i) a large recombination current in the quasi-neutral region (QNR) of the CZTSSe absorber in the standard CdS-based device, (ii) a large recombination current in the space-charge region (SCR) of the hybrid buffer CZTSSe-In2S3-CdS device, and (iii) reduced recombination currents in both the QNR and SCR of the CZTSSe-CdS-In2S3 device. This accounts for a notable 9.0% average increase in the short-circuit current density (JSC) observed in CZTSSe-CdS-In2S3 in comparison to the CdS-only CZTSSe solar cells. Energy-dispersive X-ray, secondary-ion mass spectroscopy, and grazing-incidence X-ray diffraction compositional analysis of the CZTSSe layer in the three types of kesterite solar cells suggest that there is diffusion of elemental In and Cd into the absorbers with a hybrid buffer. Enhanced Cd diffusion concomitant with a double postdeposition heat treatment of the hybrid buffer layers in the CZTSSe-CdS-In2S3 device increases carrier collection and extraction and boosts JSC. This is evidenced by electron-beam-induced current measurements, where higher current generation and collection near to the p-n junction is observed, accounting for the increase in JSC in this device. It is expected that optimization of the heat treatment of the hybrid buffer layers will lead to further improvements in the device performance.
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Affiliation(s)
- Stephen Campbell
- Department
of Mathematics, Physics and Electrical Engineering, Northumbria University, Newcastle-upon-Tyne NE1 8ST, United
Kingdom
| | - Guillaume Zoppi
- Department
of Mathematics, Physics and Electrical Engineering, Northumbria University, Newcastle-upon-Tyne NE1 8ST, United
Kingdom
| | - Leon Bowen
- Department
of Physics, Durham University, Durham DH1 3LE, United Kingdom
| | - Pietro Maiello
- Department
of Mathematics, Physics and Electrical Engineering, Northumbria University, Newcastle-upon-Tyne NE1 8ST, United
Kingdom
| | - Vincent Barrioz
- Department
of Mathematics, Physics and Electrical Engineering, Northumbria University, Newcastle-upon-Tyne NE1 8ST, United
Kingdom
| | - Neil S. Beattie
- Department
of Mathematics, Physics and Electrical Engineering, Northumbria University, Newcastle-upon-Tyne NE1 8ST, United
Kingdom
| | - Yongtao Qu
- Department
of Mathematics, Physics and Electrical Engineering, Northumbria University, Newcastle-upon-Tyne NE1 8ST, United
Kingdom
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7
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Bergkessel M, Forte B, Gilbert IH. Small-Molecule Antibiotic Drug Development: Need and Challenges. ACS Infect Dis 2023; 9:2062-2071. [PMID: 37819866 PMCID: PMC10644355 DOI: 10.1021/acsinfecdis.3c00189] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/25/2023] [Indexed: 10/13/2023]
Abstract
The need for new antibiotics is urgent. Antimicrobial resistance is rising, although currently, many more people die from drug-sensitive bacterial infections. The continued evolution of drug resistance is inevitable, fueled by pathogen population size and exposure to antibiotics. Additionally, opportunistic pathogens will always pose a threat to vulnerable patients whose immune systems cannot efficiently fight them even if they are sensitive to available antibiotics, according to clinical microbiology tests. These problems are intertwined and will worsen as human populations age, increase in density, and experience disruptions such as war, extreme weather events, or declines in standard of living. The development of appropriate drugs to treat all the world's bacterial infections should be a priority, and future success will likely require combinations of multiple approaches. However, the highest burden of bacterial infection is in Low- and Middle-Income Countries, where limited medical infrastructure is a major challenge. For effectively managing infections in these contexts, small-molecule-based treatments offer significant advantages. Unfortunately, support for ongoing small-molecule antibiotic discovery has recently suffered from significant challenges related both to the scientific difficulties in treating bacterial infections and to market barriers. Nevertheless, small-molecule antibiotics remain essential and irreplaceable tools for fighting infections, and efforts to develop novel and improved versions deserve ongoing investment. Here, we first describe the global historical context of antibiotic treatment and then highlight some of the challenges surrounding small-molecule development and potential solutions. Many of these challenges are likely to be common to all modalities of antibacterial treatment and should be addressed directly.
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Affiliation(s)
- Megan Bergkessel
- Division
of Molecular Microbiology, School of Life Sciences, University of Dundee, Dundee DD1 5EH, U.K.
| | - Barbara Forte
- Drug
Discovery Unit and Wellcome Centre for Anti-Infectives Research, Division
of Biological Chemistry and Drug Discovery, University of Dundee, Dundee DD1 5EH, U.K.
| | - Ian H. Gilbert
- Drug
Discovery Unit and Wellcome Centre for Anti-Infectives Research, Division
of Biological Chemistry and Drug Discovery, University of Dundee, Dundee DD1 5EH, U.K.
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8
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Johnston DT, Thaxter CB, Boersch-Supan PH, Davies JG, Clewley GD, Green RMW, Shamoun-Baranes J, Cook ASCP, Burton NHK, Humphreys EM. Flight heights obtained from GPS versus altimeters influence estimates of collision risk with offshore wind turbines in Lesser Black-backed Gulls Larus fuscus. Mov Ecol 2023; 11:66. [PMID: 37865783 PMCID: PMC10590026 DOI: 10.1186/s40462-023-00431-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/01/2022] [Accepted: 10/10/2023] [Indexed: 10/23/2023]
Abstract
The risk posed by offshore wind farms to seabirds through collisions with turbine blades is greatly influenced by species-specific flight behaviour. Bird-borne telemetry devices may provide improved measurement of aspects of bird behaviour, notably individual and behaviour specific flight heights. However, use of data from devices that use the GPS or barometric altimeters in the gathering of flight height data is nevertheless constrained by a current lack of understanding of the error and calibration of these methods. Uncertainty remains regarding the degree to which errors associated with these methods can affect recorded flight heights, which may in turn have a significant influence on estimates of collision risk produced by Collision Risk Models (CRMs), which incorporate flight height distribution as an input. Using GPS/barometric altimeter tagged Lesser Black-backed Gulls Larus fuscus from two breeding colonies in the UK, we examine comparative flight heights produced by these devices, and their associated errors. We present a novel method of calibrating barometric altimeters using behaviour characterised from GPS data and open-source modelled atmospheric pressure. We examine the magnitude of difference between offshore flight heights produced from GPS and altimeters, comparing these measurements across sampling schedules, colonies, and years. We found flight heights produced from altimeter data to be significantly, although not consistently, higher than those produced from GPS data. This relationship was sustained across differing sampling schedules of five minutes and of 10 s, and between study colonies. We found the magnitude of difference between GPS and altimeter derived flight heights to also vary between individuals, potentially related to the robustness of calibration factors used. Collision estimates for theoretical wind farms were consequently significantly higher when using flight height distributions generated from barometric altimeters. Improving confidence in telemetry-obtained flight height distributions, which may then be applied to CRMs, requires sources of errors in these measurements to be identified. Our study improves knowledge of the calibration processes for flight height measurements based on telemetry data, with the aim of increasing confidence in their use in future assessments of collision risk and reducing the uncertainty over predicted mortality associated with wind farms.
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Affiliation(s)
- Daniel T Johnston
- British Trust for Ornithology Scotland, Stirling University Innovation Park, Stirling, FK9 4NF, UK.
| | - Chris B Thaxter
- British Trust for Ornithology, The Nunnery, Thetford, Norfolk, IP24 2PU, UK
| | - Philipp H Boersch-Supan
- British Trust for Ornithology, The Nunnery, Thetford, Norfolk, IP24 2PU, UK
- Department of Geography, University of Florida, Gainesville, FL, 32611, USA
| | - Jacob G Davies
- British Trust for Ornithology Scotland, Stirling University Innovation Park, Stirling, FK9 4NF, UK
| | - Gary D Clewley
- British Trust for Ornithology Scotland, Stirling University Innovation Park, Stirling, FK9 4NF, UK
| | - Ros M W Green
- British Trust for Ornithology, The Nunnery, Thetford, Norfolk, IP24 2PU, UK
| | - Judy Shamoun-Baranes
- Department of Theoretical and Computational Ecology, Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam, Sciencepark 904, 1098 XH, Amsterdam, The Netherlands
| | | | - Niall H K Burton
- British Trust for Ornithology, The Nunnery, Thetford, Norfolk, IP24 2PU, UK
| | - Elizabeth M Humphreys
- British Trust for Ornithology Scotland, Stirling University Innovation Park, Stirling, FK9 4NF, UK
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9
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Pells S, Cullen DM, Deidda D, Denis-Bacelar AM, Fenwick A, Ferreira KM, Hamilton D, Heetun W, Julyan P, Needham G, Pietras B, Price E, Scuffham J, Tipping J, Robinson AP. Quantitative validation of Monte Carlo SPECT simulation: application to a Mediso AnyScan GATE simulation. EJNMMI Phys 2023; 10:60. [PMID: 37777689 PMCID: PMC10542438 DOI: 10.1186/s40658-023-00581-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/09/2023] [Accepted: 09/15/2023] [Indexed: 10/02/2023] Open
Abstract
BACKGROUND Monte Carlo (MC) simulations are used in nuclear medicine imaging as they provide unparalleled insight into processes that are not directly experimentally measurable, such as scatter and attenuation in an acquisition. Whilst MC is often used to provide a 'ground-truth', this is only the case if the simulation is fully validated against experimental data. This work presents a quantitative validation for a MC simulation of a single-photon emission computed tomography (SPECT) system. METHODS An MC simulation model of the Mediso AnyScan SCP SPECT system installed at the UK National Physical Laboratory was developed in the GATE (Geant4 Application for Tomographic Emission) toolkit. Components of the detector head and two collimator configurations were modelled according to technical specifications and physical measurements. Experimental detection efficiency measurements were collected for a range of energies, permitting an energy-dependent intrinsic camera efficiency correction function to be determined and applied to the simulation on an event-by-event basis. Experimental data were collected in a range of geometries with [Formula: see text]Tc for comparison to simulation. The procedure was then repeated with [Formula: see text]Lu to determine how the validation extended to another isotope and set of collimators. RESULTS The simulation's spatial resolution, sensitivity, energy spectra and the projection images were compared with experimental measurements. The simulation and experimental uncertainties were determined and propagated to all calculations, permitting the quantitative agreement between simulated and experimental SPECT acquisitions to be determined. Statistical agreement was seen in sinograms and projection images of both [Formula: see text]Tc and [Formula: see text]Lu data. Average simulated and experimental sensitivity ratios of ([Formula: see text]) were seen for emission and scatter windows of [Formula: see text]Tc, and ([Formula: see text]) and ([Formula: see text]) for the 113 and 208 keV emissions of [Formula: see text]Lu, respectively. CONCLUSIONS MC simulations will always be an approximation of a physical system and the level of agreement should be assessed. A validation method is presented to quantify the level of agreement between a simulation model and a physical SPECT system.
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Affiliation(s)
- Sophia Pells
- Department of Physics and Astronomy, The University of Manchester, Manchester, UK.
- National Physical Laboratory, Teddington, UK.
- Department of Radiology, UMass Chan Medical School, Worcester, MA, USA.
| | - David M Cullen
- Department of Physics and Astronomy, The University of Manchester, Manchester, UK
| | | | | | | | | | | | | | - Peter Julyan
- The Christie NHS Foundation Trust, Manchester, UK
| | - George Needham
- Department of Physics and Astronomy, The University of Manchester, Manchester, UK
- The Christie NHS Foundation Trust, Manchester, UK
| | - Ben Pietras
- Department of Physics and Astronomy, The University of Manchester, Manchester, UK
| | - Emlyn Price
- Department of Physics and Astronomy, The University of Manchester, Manchester, UK
| | - James Scuffham
- National Physical Laboratory, Teddington, UK
- Royal Surrey County Hospital, Guildford, UK
| | - Jill Tipping
- The Christie NHS Foundation Trust, Manchester, UK
| | - Andrew P Robinson
- Department of Physics and Astronomy, The University of Manchester, Manchester, UK
- National Physical Laboratory, Teddington, UK
- The Christie NHS Foundation Trust, Manchester, UK
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10
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Larsen B, Hofmann R, Camacho IS, Clarke RW, Lagarias JC, Jones AR, Jones AM. Highlighter: An optogenetic system for high-resolution gene expression control in plants. PLoS Biol 2023; 21:e3002303. [PMID: 37733664 PMCID: PMC10513317 DOI: 10.1371/journal.pbio.3002303] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/05/2022] [Accepted: 08/18/2023] [Indexed: 09/23/2023] Open
Abstract
Optogenetic actuators have revolutionized the resolution at which biological processes can be controlled. In plants, deployment of optogenetics is challenging due to the need for these light-responsive systems to function in the context of horticultural light environments. Furthermore, many available optogenetic actuators are based on plant photoreceptors that might crosstalk with endogenous signaling processes, while others depend on exogenously supplied cofactors. To overcome such challenges, we have developed Highlighter, a synthetic, light-gated gene expression system tailored for in planta function. Highlighter is based on the photoswitchable CcaS-CcaR system from cyanobacteria and is repurposed for plants as a fully genetically encoded system. Analysis of a re-engineered CcaS in Escherichia coli demonstrated green/red photoswitching with phytochromobilin, a chromophore endogenous to plants, but also revealed a blue light response likely derived from a flavin-binding LOV-like domain. We deployed Highlighter in transiently transformed Nicotiana benthamiana for optogenetic control of fluorescent protein expression. Using light to guide differential fluorescent protein expression in nuclei of neighboring cells, we demonstrate unprecedented spatiotemporal control of target gene expression. We implemented the system to demonstrate optogenetic control over plant immunity and pigment production through modulation of the spectral composition of broadband visible (white) light. Highlighter is a step forward for optogenetics in plants and a technology for high-resolution gene induction that will advance fundamental plant biology and provide new opportunities for crop improvement.
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Affiliation(s)
- Bo Larsen
- Sainsbury Laboratory, University of Cambridge, Cambridge, United Kingdom
| | - Roberto Hofmann
- Sainsbury Laboratory, University of Cambridge, Cambridge, United Kingdom
| | - Ines S. Camacho
- Biometrology, Chemical and Biological Sciences Department, National Physical Laboratory, Teddington, United Kingdom
| | - Richard W. Clarke
- Biometrology, Chemical and Biological Sciences Department, National Physical Laboratory, Teddington, United Kingdom
| | - J Clark Lagarias
- Department of Molecular and Cellular Biology, University of California, Davis, California, United States of America
| | - Alex R. Jones
- Biometrology, Chemical and Biological Sciences Department, National Physical Laboratory, Teddington, United Kingdom
| | - Alexander M. Jones
- Sainsbury Laboratory, University of Cambridge, Cambridge, United Kingdom
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11
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Armstrong HC, Russell DJF, Moss SEW, Pomeroy P, Bennett KA. Fitness correlates of blubber oxidative stress and cellular defences in grey seals (Halichoerus grypus): support for the life-history-oxidative stress theory from an animal model of simultaneous lactation and fasting. Cell Stress Chaperones 2023; 28:551-566. [PMID: 36933172 PMCID: PMC10469160 DOI: 10.1007/s12192-023-01332-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2022] [Revised: 02/13/2023] [Accepted: 02/14/2023] [Indexed: 03/19/2023] Open
Abstract
Life-history-oxidative stress theory predicts that elevated energy costs during reproduction reduce allocation to defences and increase cellular stress, with fitness consequences, particularly when resources are limited. As capital breeders, grey seals are a natural system in which to test this theory. We investigated oxidative damage (malondialdehyde (MDA) concentration) and cellular defences (relative mRNA abundance of heat shock proteins (Hsps) and redox enzymes (REs)) in blubber of wild female grey seals during the lactation fast (n = 17) and summer foraging (n = 13). Transcript abundance of Hsc70 increased, and Nox4, a pro-oxidant enzyme, decreased throughout lactation. Foraging females had higher mRNA abundance of some Hsps and lower RE transcript abundance and MDA concentrations, suggesting they experienced lower oxidative stress than lactating mothers, which diverted resources into pup rearing at the expense of blubber tissue damage. Lactation duration and maternal mass loss rate were both positively related to pup weaning mass. Pups whose mothers had higher blubber glutathione-S-transferase (GST) expression at early lactation gained mass more slowly. Higher glutathione peroxidase (GPx) and lower catalase (CAT) were associated with longer lactation but reduced maternal transfer efficiency and lower pup weaning mass. Cellular stress, and the ability to mount effective cellular defences, could proscribe lactation strategy in grey seal mothers and thus affect pup survival probability. These data support the life-history-oxidative stress hypothesis in a capital breeding mammal and suggest lactation is a period of heightened vulnerability to environmental factors that exacerbate cellular stress. Fitness consequences of stress may thus be accentuated during periods of rapid environmental change.
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Affiliation(s)
- Holly C Armstrong
- Marine Biology and Ecology Research Centre, Plymouth University, Drake Circus, Plymouth, PL4 8AA, UK.
- School of Psychology and Neuroscience, University of St Andrews, St Andrews, KY16 9JP, UK.
| | - Debbie J F Russell
- Sea Mammal Research Unit, Scottish Oceans Institute, University of St Andrews, St Andrews, KY16 8LB, UK
| | - Simon E W Moss
- Sea Mammal Research Unit, Scottish Oceans Institute, University of St Andrews, St Andrews, KY16 8LB, UK
| | - Paddy Pomeroy
- Sea Mammal Research Unit, Scottish Oceans Institute, University of St Andrews, St Andrews, KY16 8LB, UK
| | - Kimberley A Bennett
- Division of Health Science, School of Applied Sciences, Abertay University, Dundee, DD1 1HG, UK
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12
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Moubarak E, Moosavi SM, Charalambous C, Garcia S, Smit B. A Robust Framework for Generating Adsorption Isotherms to Screen Materials for Carbon Capture. Ind Eng Chem Res 2023; 62:10252-10265. [PMID: 37425135 PMCID: PMC10326871 DOI: 10.1021/acs.iecr.3c01358] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2023] [Revised: 06/06/2023] [Accepted: 06/06/2023] [Indexed: 07/11/2023]
Abstract
To rank the performance of materials for a given carbon capture process, we rely on pure component isotherms from which we predict the mixture isotherms. For screening a large number of materials, we also increasingly rely on isotherms predicted from molecular simulations. In particular, for such screening studies, it is important that the procedures to generate the data are accurate, reliable, and robust. In this work, we develop an efficient and automated workflow for a meticulous sampling of pure component isotherms. The workflow was tested on a set of metal-organic frameworks (MOFs) and proved to be reliable given different guest molecules. We show that the coupling of our workflow with the Clausius-Clapeyron relation saves CPU time, yet enables us to accurately predict pure component isotherms at the temperatures of interest, starting from a reference isotherm at a given temperature. We also show that one can accurately predict the CO2 and N2 mixture isotherms using ideal adsorbed solution theory (IAST). In particular, we show that IAST is a more reliable numerical tool to predict binary adsorption uptakes for a range of pressures, temperatures, and compositions, as it does not rely on the fitting of experimental data, which typically needs to be done with analytical models such as dual-site Langmuir (DSL). This makes IAST a more suitable and general technique to bridge the gap between adsorption (raw) data and process modeling. To demonstrate this point, we show that the ranking of materials, for a standard three-step temperature swing adsorption (TSA) process, can be significantly different depending on the thermodynamic method used to predict binary adsorption data. We show that, for the design of processes that capture CO2 from low concentration (0.4%) streams, the commonly used methodology to predict mixture isotherms incorrectly assigns up to 33% of the materials as top-performing.
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Affiliation(s)
- Elias Moubarak
- Laboratory
of Molecular Simulation (LSMO), Institut des Sciences et Ingénierie
Chimiques, École Polytechnique Fédérale
de Lausanne (EPFL), Rue de l’Industrie 17, CH-1951 Sion, Valais, Switzerland
| | - Seyed Mohamad Moosavi
- Laboratory
of Molecular Simulation (LSMO), Institut des Sciences et Ingénierie
Chimiques, École Polytechnique Fédérale
de Lausanne (EPFL), Rue de l’Industrie 17, CH-1951 Sion, Valais, Switzerland
- Department
of Chemical Engineering & Applied Chemistry, University of Toronto, Toronto, Ontario M5S 3E5, Canada
| | - Charithea Charalambous
- The
Research Centre for Carbon Solutions (RCCS), School of Engineering
and Physical Sciences, Heriot-Watt University, EH14 4AS Edinburgh, United Kingdom
| | - Susana Garcia
- The
Research Centre for Carbon Solutions (RCCS), School of Engineering
and Physical Sciences, Heriot-Watt University, EH14 4AS Edinburgh, United Kingdom
| | - Berend Smit
- Laboratory
of Molecular Simulation (LSMO), Institut des Sciences et Ingénierie
Chimiques, École Polytechnique Fédérale
de Lausanne (EPFL), Rue de l’Industrie 17, CH-1951 Sion, Valais, Switzerland
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13
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Hajiabadi SH, Khalifeh M, van Noort R, Silva Santos Moreira PH. Review on Geopolymers as Wellbore Sealants: State of the Art Optimization for CO 2 Exposure and Perspectives. ACS Omega 2023; 8:23320-23345. [PMID: 37426265 PMCID: PMC10323953 DOI: 10.1021/acsomega.3c01777] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/23/2023] [Accepted: 06/07/2023] [Indexed: 07/11/2023]
Abstract
Wellbores used in underground production and storage activities, including carbon capture and storage (CCS), are typically sealed using sealants based on Ordinary Portland Cement (OPC). However, leakage along these seals or through them during CCS operations can pose a significant threat to long-term storage integrity. In this review paper, we explore the potential of geopolymer (GP) systems as alternative sealants in wells exposed to CO2 during CCS. First, we discuss how key parameters control the mechanical properties, permeability, and chemical durability of GPs based on different starting materials as well as their optimum values. These parameters include the chemical and mineralogical composition, particle size, and particle shape of the precursor materials; the composition of the hardener; the chemistry of the full system (particularly the Si/Al, Si/(Na+K), Si/Ca, Si/Mg, and Si/Fe ratios); the water content of the mix; and the conditions under which curing occurs. Next, we review existing knowledge on the use of GPs as wellbore sealants to identify key knowledge gaps and challenges and the research needed to address these challenges. Our review shows the great potential of GPs as alternative wellbore sealant materials in CCS (as well as other applications) due to their high corrosion durability, low matrix permeability, and good mechanical properties. However, important challenges are identified that require further research, such as mix optimization, taking into account curing and exposure conditions and available starting materials; the development of optimalization workflows, along with building larger data sets on how the identified parameters affect GP properties, can streamline this optimization for future applications.
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Affiliation(s)
- Seyed Hasan Hajiabadi
- Department
of Energy and Petroleum Engineering, Faculty of Science and Technology, University of Stavanger, 4036 Stavanger, Norway
| | - Mahmoud Khalifeh
- Department
of Energy and Petroleum Engineering, Faculty of Science and Technology, University of Stavanger, 4036 Stavanger, Norway
| | - Reinier van Noort
- Department
of Reservoir Technology, Institute for Energy
Technology, Postbox 40, 2027 Kjeller, Norway
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14
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Jablonka K, Rosen AS, Krishnapriyan AS, Smit B. An Ecosystem for Digital Reticular Chemistry. ACS Cent Sci 2023; 9:563-581. [PMID: 37122448 PMCID: PMC10141625 DOI: 10.1021/acscentsci.2c01177] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Indexed: 05/03/2023]
Abstract
The vastness of the materials design space makes it impractical to explore using traditional brute-force methods, particularly in reticular chemistry. However, machine learning has shown promise in expediting and guiding materials design. Despite numerous successful applications of machine learning to reticular materials, progress in the field has stagnated, possibly because digital chemistry is more an art than a science and its limited accessibility to inexperienced researchers. To address this issue, we present mofdscribe, a software ecosystem tailored to novice and seasoned digital chemists that streamlines the ideation, modeling, and publication process. Though optimized for reticular chemistry, our tools are versatile and can be used in nonreticular materials research. We believe that mofdscribe will enable a more reliable, efficient, and comparable field of digital chemistry.
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Affiliation(s)
- Kevin
Maik Jablonka
- Laboratory of molecular simulation (LSMO), Institut des Sciences et Ingénierie Chimiques, Ecole Polytechnique Fédérale de Lausanne (EPFL), Rue de l’Industrie 17, CH-1951 Sion, Switzerland
| | - Andrew S. Rosen
- Department of Materials
Science and Engineering, University of California, Berkeley, California 94720, United States
- Miller Institute for Basic Research in Science, University of California, Berkeley, California 94720, United States
- Materials Science Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
| | - Aditi S. Krishnapriyan
- Department of Chemical and Biomolecular Engineering, University of California, Berkeley, California 94720, United States
- Department of Electrical Engineering and
Computer Science, University of California, Berkeley, California 94720, United States
- Computational
Research Division, Lawrence Berkeley National
Laboratory, Berkeley, California 94720, United States
| | - Berend Smit
- Laboratory of molecular simulation (LSMO), Institut des Sciences et Ingénierie Chimiques, Ecole Polytechnique Fédérale de Lausanne (EPFL), Rue de l’Industrie 17, CH-1951 Sion, Switzerland
- E-mail:
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15
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Itskou I, L’Hermitte A, Marchesini S, Tian T, Petit C. How to Tailor Porous Boron Nitride Properties for Applications in Interfacial Processes. Acc Mater Res 2023; 4:143-155. [PMID: 36873082 PMCID: PMC9972479 DOI: 10.1021/accountsmr.2c00148] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/03/2022] [Revised: 01/04/2023] [Indexed: 06/18/2023]
Abstract
The research of new porous materials for applications in interfacial processes is key to addressing global energy and sustainability challenges. For example, porous materials can be used to store fuels such as hydrogen or methane or to separate chemical mixtures reducing the energy currently required by thermal separation processes. Their catalytic properties can be exploited to convert adsorbed molecules into valuable or less hazardous chemicals, thereby reducing energy consumption or pollutants emissions. Porous boron nitride (BN) has appeared as a promising material for applications in molecular separations, gas storage, and catalysis owing to its high surface area and thermal stability, as well as its tunable physical properties and chemistry. However, the production of porous BN is still limited to the laboratory scale, and its formation mechanism, as well as ways to control porosity and chemistry, are yet to be fully understood. In addition, studies have pointed toward the instability of porous BN materials when exposed to humidity, which could significantly impact performance in industrial applications. Studies on porous BN performance and recyclability when employed in adsorption, gas storage, and catalysis remain limited, despite encouraging preliminary studies. Moreover, porous BN powder must be shaped into macrostructures (e.g., pellets) to be used commercially. However, common methods to shape porous materials into macrostructures often cause a reduction in the surface area and/or mechanical strength. In recent years, research groups, including ours, have started addressing the challenges discussed above. Herein, we summarize our collective findings through a selection of key studies. First, we discuss the chemistry and structure of BN, clarifying confusion around terminology and discussing the hydrolytic instability of the material in relation to its structure and chemistry. We demonstrate a way to reduce the instability in water while still maintaining high specific surface area. We propose a mechanism for the formation of porous BN and discuss the effects of different synthesis parameters on the structure and chemistry of porous BN, therefore providing a way to tune its properties for selected applications. While the syntheses covered often lead to a powder product, we also present ways to shape porous BN powders into macrostructures while still maintaining high accessible surface area for interfacial processes. Finally, we evaluate porous BN performance for chemical separations, gas storage, and catalysis. While the above highlights key advances in the field, further work is needed to allow deployment of porous BN. Specifically, we suggest evaluating its hydrolytic stability, refining the ways to shape the material into stable and reproducible macrostructures, establishing clear design rules to produce BN with specific chemistry and porosity, and, finally, providing standardized test procedures to evaluate porous BN catalytic and sorptive properties to facilitate comparison.
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Affiliation(s)
- Ioanna Itskou
- Barrer
Centre, Department of Chemical Engineering, Imperial College London, LondonSW7 2AZ, United
Kingdom
| | - Anouk L’Hermitte
- Barrer
Centre, Department of Chemical Engineering, Imperial College London, LondonSW7 2AZ, United
Kingdom
- Department
of Materials, Imperial College London, LondonSW7 2AZ, United Kingdom
| | - Sofia Marchesini
- National
Physical Laboratory, Hampton Road, TeddingtonTW11 0LW, United Kingdom
| | - Tian Tian
- Barrer
Centre, Department of Chemical Engineering, Imperial College London, LondonSW7 2AZ, United
Kingdom
| | - Camille Petit
- Barrer
Centre, Department of Chemical Engineering, Imperial College London, LondonSW7 2AZ, United
Kingdom
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16
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Stas SM, Spracklen BD, Willetts PD, Le TC, Tran HD, Le TT, Ngo DT, Le AV, Le HT, Rutishauser E, Schwendike J, Marsham JH, van Kuijk M, Jew EKK, Phillips OL, Spracklen DV. Implications of tropical cyclones on damage and potential recovery and restoration of logged forests in Vietnam. Philos Trans R Soc Lond B Biol Sci 2023; 378:20210081. [PMID: 36373926 PMCID: PMC9661952 DOI: 10.1098/rstb.2021.0081] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/28/2021] [Accepted: 07/04/2022] [Indexed: 11/16/2022] Open
Abstract
Many natural forests in Southeast Asia are degraded following decades of logging. Restoration of these forests is delayed by ongoing logging and tropical cyclones, but the implications for recovery are largely uncertain. We analysed meteorological, satellite and forest inventory plot data to assess the effect of Typhoon Doksuri, a major tropical cyclone, on the forest landscapes of central Vietnam consisting of natural forests and plantations. We estimated the return period for a cyclone of this intensity to be 40 years. Plantations were almost twice as likely to suffer cyclone damage compared to natural forests. Logged natural forests (9-12 years after cessation of government-licensed logging) were surveyed before and after the storm with 2 years between measurements and remained a small biomass carbon sink (0.1 ± 0.3 Mg C ha-1 yr-1) over this period. The cyclone reduced the carbon sink of recovering natural forests by an average of 0.85 Mg C ha-1 yr-1, less than the carbon loss due to ongoing unlicensed logging. Restoration of forest landscapes in Southeast Asia requires a reduction in unlicensed logging and prevention of further conversion of degraded natural forests to plantations, particularly in landscapes prone to tropical cyclones where natural forests provide a resilient carbon sink. This article is part of the theme issue 'Understanding forest landscape restoration: reinforcing scientific foundations for the UN Decade on Ecosystem Restoration'.
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Affiliation(s)
- S. M. Stas
- School of Earth and Environment, University of Leeds, Leeds LS2 9JT, UK
| | - B. D. Spracklen
- School of Earth and Environment, University of Leeds, Leeds LS2 9JT, UK
| | - P. D. Willetts
- School of Earth and Environment, University of Leeds, Leeds LS2 9JT, UK
| | - T. C. Le
- Viet Nature Conservation Centre, PO Box 89, No. 6 Dinh Le Street, Hanoi, Viet Nam
| | - H. D. Tran
- Viet Nature Conservation Centre, PO Box 89, No. 6 Dinh Le Street, Hanoi, Viet Nam
| | - T. T. Le
- Viet Nature Conservation Centre, PO Box 89, No. 6 Dinh Le Street, Hanoi, Viet Nam
| | - D. T. Ngo
- Center for Agriculture Forestry Research and Development, University of Agriculture and Forestry, Hue University, 102 Phung Hung Street, Hue, Viet Nam
| | - A. V. Le
- Center for Agriculture Forestry Research and Development, University of Agriculture and Forestry, Hue University, 102 Phung Hung Street, Hue, Viet Nam
| | - H. T. Le
- Center for Agriculture Forestry Research and Development, University of Agriculture and Forestry, Hue University, 102 Phung Hung Street, Hue, Viet Nam
| | - E. Rutishauser
- Info Flora, Conservatory and Botanical Gardens, PO Box 71, CH-1292 Chambésy-Genève, Switzerland
| | - J. Schwendike
- School of Earth and Environment, University of Leeds, Leeds LS2 9JT, UK
| | - J. H. Marsham
- School of Earth and Environment, University of Leeds, Leeds LS2 9JT, UK
| | - M. van Kuijk
- Ecology and Biodiversity, Institute of Environmental Biology, Utrecht University, PO Box 80084, 3508 TB Utrecht, The Netherlands
| | - E. K. K. Jew
- University of York, Heslington, York YO8 5DD, UK
| | - O. L. Phillips
- School of Geography, University of Leeds, Leeds LS2 9JT, UK
| | - D. V. Spracklen
- School of Earth and Environment, University of Leeds, Leeds LS2 9JT, UK
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17
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Paton KR, Despotelis K, Kumar N, Turner P, Pollard AJ. On the use of Raman spectroscopy to characterize mass-produced graphene nanoplatelets. Beilstein J Nanotechnol 2023; 14:509-521. [PMID: 37152472 PMCID: PMC10155622 DOI: 10.3762/bjnano.14.42] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/28/2022] [Accepted: 04/04/2023] [Indexed: 05/09/2023]
Abstract
Raman spectroscopy is one of the most common methods to characterize graphene-related 2D materials, providing information on a wide range of physical and chemical properties. Because of typical sample inhomogeneity, Raman spectra are acquired from several locations across a sample, and analysis is carried out on the averaged spectrum from all locations. This is then used to characterize the "quality" of the graphene produced, in particular the level of exfoliation for top-down manufactured materials. However, these have generally been developed using samples prepared with careful separation of unexfoliated materials. In this work we assess these metrics when applied to non-ideal samples, where unexfoliated graphite has been deliberately added to the exfoliated material. We demonstrate that previously published metrics, when applied to averaged spectra, do not allow the presence of this unexfoliated material to be reliably detected. Furthermore, when a sufficiently large number of spectra are acquired, it is found that by processing and classifying individual spectra, rather than the averaged spectrum, it is possible to identify the presence of this material in the sample, although quantification of the amount remains approximate. We therefore recommend this approach as a robust methodology for reliable characterization of mass-produced graphene-related 2D materials using confocal Raman spectroscopy.
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Affiliation(s)
- Keith R Paton
- National Physical Laboratory, Teddington, TW11 0LW, UK
| | | | - Naresh Kumar
- National Physical Laboratory, Teddington, TW11 0LW, UK
- Department of Chemistry and Applied Biosciences, ETH Zurich, CH-8093 Zurich, Switzerland
| | - Piers Turner
- National Physical Laboratory, Teddington, TW11 0LW, UK
- Department of Physics, University of Oxford, Oxford, UK
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18
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Huang CC, Wang H, Cao Y, Weatherby E, Richheimer F, Wood S, Jiang S, Wei D, Dong Y, Lu X, Wang P, Polcar T, Hewak DW. Facilitating Uniform Large-Scale MoS 2, WS 2 Monolayers, and Their Heterostructures through van der Waals Epitaxy. ACS Appl Mater Interfaces 2022; 14:42365-42373. [PMID: 36082455 PMCID: PMC9501908 DOI: 10.1021/acsami.2c12174] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/08/2022] [Accepted: 09/01/2022] [Indexed: 06/15/2023]
Abstract
The fabrication process for the uniform large-scale MoS2, WS2 transition-metal dichalcogenides (TMDCs) monolayers, and their heterostructures has been developed by van der Waals epitaxy (VdWE) through the reaction of MoCl5 or WCl6 precursors and the reactive gas H2S to form MoS2 or WS2 monolayers, respectively. The heterostructures of MoS2/WS2 or WS2/MoS2 can be easily achieved by changing the precursor from WCl6 to MoCl5 once the WS2 monolayer has been fabricated or switching the precursor from MoCl5 to WCl6 after the MoS2 monolayer has been deposited on the substrate. These VdWE-grown MoS2, WS2 monolayers, and their heterostructures have been successfully deposited on Si wafers with 300 nm SiO2 coating (300 nm SiO2/Si), quartz glass, fused silica, and sapphire substrates using the protocol that we have developed. We have characterized these TMDCs materials with a range of tools/techniques including scanning electron microscopy (SEM), X-ray photoelectron spectroscopy (XPS), micro-Raman analysis, photoluminescence (PL), atomic force microscopy (AFM), transmission electron microscopy (TEM), energy-dispersive X-ray spectroscopy (EDX), and selected-area electron diffraction (SAED). The band alignment and large-scale uniformity of MoS2/WS2 heterostructures have also been evaluated with PL spectroscopy. This process and resulting large-scale MoS2, WS2 monolayers, and their heterostructures have demonstrated promising solutions for the applications in next-generation nanoelectronics, nanophotonics, and quantum technology.
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Affiliation(s)
- Chung-Che Huang
- Optoelectronics
Research Centre, University of Southampton, Southampton SO17 1BJ, United Kingdom
| | - He Wang
- nCAT, University
of Southampton, Southampton SO17 1BJ, United Kingdom
| | - Yameng Cao
- National
Physical Laboratory, Teddington, TW11 0LW, United Kingdom
| | - Ed Weatherby
- Optoelectronics
Research Centre, University of Southampton, Southampton SO17 1BJ, United Kingdom
| | | | - Sebastian Wood
- National
Physical Laboratory, Teddington, TW11 0LW, United Kingdom
| | - Shan Jiang
- School
of Materials Science and Engineering, Harbin
Institute of Technology, 150001 Harbin, China
| | - Daqing Wei
- School
of Materials Science and Engineering, Harbin
Institute of Technology, 150001 Harbin, China
| | - Yongkang Dong
- National
Key Laboratory of Science and Technology on Tunable Laser, Harbin Institute of Technology, 150001 Harbin, China
| | - Xiaosong Lu
- School of
Physics and Electronic Engineering, Jiangsu
Normal University, 221116 Xuzhou, China
| | - Pengfei Wang
- Key
Laboratory of In-Fiber Integrated Optics of Ministry of Education,
College of Science, Harbin Engineering University, 150001 Harbin, China
| | - Tomas Polcar
- nCAT, University
of Southampton, Southampton SO17 1BJ, United Kingdom
| | - Daniel W. Hewak
- Optoelectronics
Research Centre, University of Southampton, Southampton SO17 1BJ, United Kingdom
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19
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Lund A, Manohara GV, Song AY, Jablonka KM, Ireland CP, Cheah LA, Smit B, Garcia S, Reimer JA. Characterization of Chemisorbed Species and Active Adsorption Sites in Mg-Al Mixed Metal Oxides for High-Temperature CO 2 Capture. Chem Mater 2022; 34:3893-3901. [PMID: 35573112 PMCID: PMC9097159 DOI: 10.1021/acs.chemmater.1c03101] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/07/2021] [Revised: 03/17/2022] [Indexed: 06/15/2023]
Abstract
Mg-Al mixed metal oxides (MMOs), derived from the decomposition of layered double hydroxides (LDHs), have been purposed as adsorbents for CO2 capture of industrial plant emissions. To aid in the design and optimization of these materials for CO2 capture at 200 °C, we have used a combination of solid-state nuclear magnetic resonance (ssNMR) and density functional theory (DFT) to characterize the CO2 gas sorption products and determine the various sorption sites in Mg-Al MMOs. A comparison of the DFT cluster calculations with the observed 13C chemical shifts of the chemisorbed products indicates that mono- and bidentate carbonates are formed at the Mg-O sites with adjacent Al substitution of an Mg atom, while the bicarbonates are formed at Mg-OH sites without adjacent Al substitution. Quantitative 13C NMR shows an increase in the relative amount of strongly basic sites, where the monodentate carbonate product is formed, with increasing Al/Mg molar ratios in the MMOs. This detailed understanding of the various basic Mg-O sites presented in MMOs and the formation of the carbonate, bidentate carbonate, and bicarbonate chemisorbed species yields new insights into the mechanism of CO2 adsorption at 200 °C, which can further aid in the design and capture capacity optimization of the materials.
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Affiliation(s)
- Alicia Lund
- Materials
Science Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
- Department
of Chemical and Biomolecular Engineering, University of California, Berkeley, California 94720, United States
| | - G. V. Manohara
- Research
Center for Carbon Solutions (RCCS), School of Engineering and Physical
Sciences, Heriot-Watt University, Edinburgh EH14 4AS, U.K.
| | - Ah-Young Song
- Materials
Science Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
- Department
of Chemical and Biomolecular Engineering, University of California, Berkeley, California 94720, United States
| | - Kevin Maik Jablonka
- Laboratory
of Molecular Simulation (LSMO), Institut
des Sciences et Ingénierie Chimiques, École Polytechnique
Fédérale de Lausanne (EPFL), Rue de l’Industrie 17, Sion CH-1951, Switzerland
| | - Christopher P. Ireland
- Laboratory
of Molecular Simulation (LSMO), Institut
des Sciences et Ingénierie Chimiques, École Polytechnique
Fédérale de Lausanne (EPFL), Rue de l’Industrie 17, Sion CH-1951, Switzerland
| | - Li Anne Cheah
- Research
Center for Carbon Solutions (RCCS), School of Engineering and Physical
Sciences, Heriot-Watt University, Edinburgh EH14 4AS, U.K.
| | - Berend Smit
- Laboratory
of Molecular Simulation (LSMO), Institut
des Sciences et Ingénierie Chimiques, École Polytechnique
Fédérale de Lausanne (EPFL), Rue de l’Industrie 17, Sion CH-1951, Switzerland
| | - Susana Garcia
- Research
Center for Carbon Solutions (RCCS), School of Engineering and Physical
Sciences, Heriot-Watt University, Edinburgh EH14 4AS, U.K.
| | - Jeffrey A. Reimer
- Materials
Science Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
- Department
of Chemical and Biomolecular Engineering, University of California, Berkeley, California 94720, United States
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20
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Toroz D, Song F, Uddin A, Chass GA, Di Tommaso D. A Database of Solution Additives Promoting Mg 2+ Dehydration and the Onset of MgCO 3 Nucleation. Cryst Growth Des 2022; 22:3080-3089. [PMID: 35529066 PMCID: PMC9073943 DOI: 10.1021/acs.cgd.1c01525] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/29/2021] [Revised: 03/22/2022] [Indexed: 06/14/2023]
Abstract
Formed via aqueous carbonation of Mg2+ ions, the crystallization of magnesite (MgCO3) is a promising route to carbon capture and reuse, albeit limited by the slow precipitation of MgCO3. Although magnesite is naturally abundant, forming at low temperature conditions, its industrial production is an energy-intensive process due to the temperatures required to prevent the formation of hydrated phases. The principal difficulty in aqueous conditions arises from the very strong Mg2+···H2O interaction, with high barriers to Mg2+ dehydration. Using atomistic simulations, we have investigated the influence of 30 additive anions (X n-, n = 1-3), ranging from simple halides to more complex molecules, on the first two steps of MgCO3 aggregation from solution, as follows: Mg2+ dehydration and subsequent prenucleative Mg2+···CO3 2- pairing. We have computed the thermodynamic stabilities of solvent shared ion pairs (Mg2+···H2O···X n-) and contact ion pairs (Mg2+···X n-) to reveal the propensity of solution additives to inhibit or promote Mg2+···CO3 2- formation. We have determined the stabilization of undercoordinated hydrated Mg2+ states with a vacant coordination site to which CO3 2- can bind, subsequently initiating MgCO3 nucleation or Mg2+ incorporation into the crystal lattice. Extensive molecular dynamics simulations of electrolyte solutions containing Na2CO3 with different sources of Mg2+ (i.e., MgCl2, MgSO4, and Mg(CH3COO)2) further show that the degree of dehydration of Mg2+ and the structure of prenucleation MgCO3 clusters change depending on the counterion identity. Through a fundamental understanding of the role of solution additives in the mechanism of Mg2+ dehydration, our results help to rationalize previously reported experimental observation of the effect of solvation environments on the growth of magnesite. This understanding may contribute to identifying the solution composition and conditions that could promote the low-temperature CO2 conversion into MgCO3 at industrially relevant scales.
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Affiliation(s)
- Dimitrios Toroz
- Department
of Chemistry, Queen Mary University of London, Mile End Road, London, E1 4NS, United
Kingdom
| | - Fu Song
- Department
of Chemistry, Queen Mary University of London, Mile End Road, London, E1 4NS, United
Kingdom
| | - Amira Uddin
- Department
of Chemistry, Queen Mary University of London, Mile End Road, London, E1 4NS, United
Kingdom
| | - Gregory A. Chass
- Department
of Chemistry, Queen Mary University of London, Mile End Road, London, E1 4NS, United
Kingdom
- Department
of Chemistry and Chemical Biology, McMaster
University, Hamilton, Ontario L8S 4M1, Canada
- Faculty
of Land and Food Systems, The University
of British Columbia, Vancouver, British Columbia V6T 1Z4, Canada
| | - Devis Di Tommaso
- Department
of Chemistry, Queen Mary University of London, Mile End Road, London, E1 4NS, United
Kingdom
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21
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Du T, Richheimer F, Frohna K, Gasparini N, Mohan L, Min G, Xu W, Macdonald TJ, Yuan H, Ratnasingham SR, Haque S, Castro FA, Durrant JR, Stranks SD, Wood S, McLachlan MA, Briscoe J. Overcoming Nanoscale Inhomogeneities in Thin-Film Perovskites via Exceptional Post-annealing Grain Growth for Enhanced Photodetection. Nano Lett 2022; 22:979-988. [PMID: 35061402 PMCID: PMC9007526 DOI: 10.1021/acs.nanolett.1c03839] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/05/2021] [Revised: 01/06/2022] [Indexed: 06/14/2023]
Abstract
Antisolvent-assisted spin coating has been widely used for fabricating metal halide perovskite films with smooth and compact morphology. However, localized nanoscale inhomogeneities exist in these films owing to rapid crystallization, undermining their overall optoelectronic performance. Here, we show that by relaxing the requirement for film smoothness, outstanding film quality can be obtained simply through a post-annealing grain growth process without passivation agents. The morphological changes, driven by a vaporized methylammonium chloride (MACl)-dimethylformamide (DMF) solution, lead to comprehensive defect elimination. Our nanoscale characterization visualizes the local defective clusters in the as-deposited film and their elimination following treatment, which couples with the observation of emissive grain boundaries and excellent inter- and intragrain optoelectronic uniformity in the polycrystalline film. Overcoming these performance-limiting inhomogeneities results in the enhancement of the photoresponse to low-light (<0.1 mW cm-2) illumination by up to 40-fold, yielding high-performance photodiodes with superior low-light detection.
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Affiliation(s)
- Tian Du
- School
of Engineering and Materials Science and Materials Research Institute, Queen Mary University of London, London E1 4NS, United Kingdom
- Department
of Materials and Centre for Processable Electronics, Imperial College, London W12 0BZ, United Kingdom
| | - Filipe Richheimer
- National
Physical Laboratory, Hampton Road, Teddington TW11 0LW, United Kingdom
| | - Kyle Frohna
- Cavendish
Laboratory, JJ Thomson
Avenue, Cambridge CB3 0HE, United Kingdom
| | - Nicola Gasparini
- Department
of Chemistry and Centre for Processable Electronics, Imperial College, London W12 0BZ, United Kingdom
| | - Lokeshwari Mohan
- School
of Engineering and Materials Science and Materials Research Institute, Queen Mary University of London, London E1 4NS, United Kingdom
- Department
of Materials and Centre for Processable Electronics, Imperial College, London W12 0BZ, United Kingdom
| | - Ganghong Min
- Department
of Chemistry and Centre for Processable Electronics, Imperial College, London W12 0BZ, United Kingdom
| | - Weidong Xu
- Department
of Chemistry and Centre for Processable Electronics, Imperial College, London W12 0BZ, United Kingdom
| | - Thomas J. Macdonald
- School
of Engineering and Materials Science and Materials Research Institute, Queen Mary University of London, London E1 4NS, United Kingdom
- Department
of Chemistry and Centre for Processable Electronics, Imperial College, London W12 0BZ, United Kingdom
| | - Haozhen Yuan
- School
of Engineering and Materials Science and Materials Research Institute, Queen Mary University of London, London E1 4NS, United Kingdom
| | - Sinclair R. Ratnasingham
- School
of Engineering and Materials Science and Materials Research Institute, Queen Mary University of London, London E1 4NS, United Kingdom
- Department
of Materials and Centre for Processable Electronics, Imperial College, London W12 0BZ, United Kingdom
| | - Saif Haque
- Department
of Chemistry and Centre for Processable Electronics, Imperial College, London W12 0BZ, United Kingdom
| | - Fernando A. Castro
- National
Physical Laboratory, Hampton Road, Teddington TW11 0LW, United Kingdom
| | - James R. Durrant
- Department
of Chemistry and Centre for Processable Electronics, Imperial College, London W12 0BZ, United Kingdom
- SPECIFIC
IKC, College of Engineering, Swansea University, Swansea SA2 7AX, United Kingdom
| | - Samuel D. Stranks
- Cavendish
Laboratory, JJ Thomson
Avenue, Cambridge CB3 0HE, United Kingdom
- Department
of Chemical Engineering & Biotechnology, University of Cambridge, Philippa Fawcett Drive, Cambridge CB3 0AS, United Kingdom
| | - Sebastian Wood
- National
Physical Laboratory, Hampton Road, Teddington TW11 0LW, United Kingdom
| | - Martyn A. McLachlan
- Department
of Materials and Centre for Processable Electronics, Imperial College, London W12 0BZ, United Kingdom
| | - Joe Briscoe
- School
of Engineering and Materials Science and Materials Research Institute, Queen Mary University of London, London E1 4NS, United Kingdom
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22
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Ruesch A, McKnight JC, Fahlman A, Shinn-Cunningham BG, Kainerstorfer JM. Near-Infrared Spectroscopy as a Tool for Marine Mammal Research and Care. Front Physiol 2022; 12:816701. [PMID: 35111080 PMCID: PMC8801602 DOI: 10.3389/fphys.2021.816701] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/17/2021] [Accepted: 12/27/2021] [Indexed: 11/13/2022] Open
Abstract
Developments in wearable human medical and sports health trackers has offered new solutions to challenges encountered by eco-physiologists attempting to measure physiological attributes in freely moving animals. Near-infrared spectroscopy (NIRS) is one such solution that has potential as a powerful physio-logging tool to assess physiology in freely moving animals. NIRS is a non-invasive optics-based technology, that uses non-ionizing radiation to illuminate biological tissue and measures changes in oxygenated and deoxygenated hemoglobin concentrations inside tissues such as skin, muscle, and the brain. The overall footprint of the device is small enough to be deployed in wearable physio-logging devices. We show that changes in hemoglobin concentration can be recorded from bottlenose dolphins and gray seals with signal quality comparable to that achieved in human recordings. We further discuss functionality, benefits, and limitations of NIRS as a standard tool for animal care and wildlife tracking for the marine mammal research community.
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Affiliation(s)
- Alexander Ruesch
- Neuroscience Institute, Carnegie Mellon University, Pittsburgh, PA, United States
| | - J. Chris McKnight
- Sea Mammal Research Unit, University of St Andrews, St Andrews, United Kingdom
- *Correspondence: J. Chris McKnight,
| | - Andreas Fahlman
- Fundación Oceanogràfic de la Comunitat Valenciana, Valencia, Spain
- Kolmården Wildlife Park, Kolmården, Sweden
| | - Barbara G. Shinn-Cunningham
- Neuroscience Institute, Carnegie Mellon University, Pittsburgh, PA, United States
- Department of Biomedical Engineering, Carnegie Mellon University, Pittsburgh, PA, United States
| | - Jana M. Kainerstorfer
- Neuroscience Institute, Carnegie Mellon University, Pittsburgh, PA, United States
- Department of Biomedical Engineering, Carnegie Mellon University, Pittsburgh, PA, United States
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23
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Majumdar S, Moosavi SM, Jablonka KM, Ongari D, Smit B. Diversifying Databases of Metal Organic Frameworks for High-Throughput Computational Screening. ACS Appl Mater Interfaces 2021; 13:61004-61014. [PMID: 34910455 PMCID: PMC8719320 DOI: 10.1021/acsami.1c16220] [Citation(s) in RCA: 22] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/24/2021] [Accepted: 12/03/2021] [Indexed: 05/19/2023]
Abstract
By combining metal nodes and organic linkers, an infinite number of metal organic frameworks (MOFs) can be designed in silico. Therefore, when making new databases of such hypothetical MOFs, we need to ensure that they not only contribute toward the growth of the count of structures but also add different chemistries to the existing databases. In this study, we designed a database of ∼20,000 hypothetical MOFs, which are diverse in terms of their chemical design space─metal nodes, organic linkers, functional groups, and pore geometries. Using machine learning techniques, we visualized and quantified the diversity of these structures. We find that on adding the structures of our database, the overall diversity metrics of hypothetical databases improve, especially in terms of the chemistry of metal nodes. We then assessed the usefulness of diverse structures by evaluating their performance, using grand-canonical Monte Carlo simulations, in two important environmental applications─post-combustion carbon capture and hydrogen storage. We find that many of these structures perform better than widely used benchmark materials such as Zeolite-13X (for post-combustion carbon capture) and MOF-5 (for hydrogen storage). All the structures developed in this study, and their properties, are provided on the Materials Cloud to encourage further use of these materials for other applications.
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24
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Boccorh DK, Macdonald PA, Boyle CW, Wain AJ, Berlouis LEA, Wark AW. A universal polymer shell-isolated nanoparticle (SHIN) design for single particle spectro-electrochemical SERS sensing using different core shapes. Nanoscale Adv 2021; 3:6415-6426. [PMID: 36133494 PMCID: PMC9416900 DOI: 10.1039/d1na00473e] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/23/2021] [Accepted: 09/20/2021] [Indexed: 06/16/2023]
Abstract
Shell-isolated nanoparticles (SHINs) have attracted increasing interest for non-interfering plasmonic enhanced sensing in fields such as materials science, biosensing, and in various electrochemical systems. The metallic core of these nanoparticles is isolated from the surrounding environment preventing direct contact or chemical interaction with the metal surface, while still being close enough to enable localized surface plasmon enhancement of the Raman scattering signal from the analyte. This concept forms the basis of the shell isolated nanoparticle-enhanced Raman spectroscopy (SHINERS) technique. To date, the vast majority of SHIN designs have focused on SiO2 shells around spherical nanoparticle cores and there has been very limited published research considering alternatives. In this article, we introduce a new polymer-based approach which provides excellent control over the layer thickness and can be applied to plasmonic metal nanoparticles of various shapes and sizes without compromising the overall nanoparticle morphology. The SHIN layers are shown to exhibit excellent passivation properties and robustness in the case of gold nanosphere (AuNP) and anisotropic gold nanostar (AuNS) core shapes. In addition, in situ SHINERS spectro-electrochemistry measurements performed on both SHIN and bare Au nanoparticles demonstrate the utility of the SHIN coatings. Correlated confocal Raman and SEM mapping was achieved to clearly establish single nanoparticle SERS sensitivity. Finally, confocal in situ SERS mapping enabled visualisation of the redox related molecular structure changes occurring on an electrode surface in the vicinity of individual SHIN-coated nanoparticles.
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Affiliation(s)
- Delali K Boccorh
- Centre for Molecular Nanometrology, Technology and Innovation Centre, Dept. of Pure & Applied Chemistry, University of Strathclyde 99 George St Glasgow G1 1RD UK +44 (0)141 548 3084
- National Physical Laboratory Hampton Road Teddington TW11 0LW UK
| | - Peter A Macdonald
- Centre for Molecular Nanometrology, Technology and Innovation Centre, Dept. of Pure & Applied Chemistry, University of Strathclyde 99 George St Glasgow G1 1RD UK +44 (0)141 548 3084
| | - Colm W Boyle
- Centre for Molecular Nanometrology, Technology and Innovation Centre, Dept. of Pure & Applied Chemistry, University of Strathclyde 99 George St Glasgow G1 1RD UK +44 (0)141 548 3084
| | - Andrew J Wain
- National Physical Laboratory Hampton Road Teddington TW11 0LW UK
| | - Leonard E A Berlouis
- Dept. of Pure & Applied Chemistry, University of Strathclyde 295 Cathedral St Glasgow G1 1XL UK
| | - Alastair W Wark
- Centre for Molecular Nanometrology, Technology and Innovation Centre, Dept. of Pure & Applied Chemistry, University of Strathclyde 99 George St Glasgow G1 1RD UK +44 (0)141 548 3084
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25
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McKnight JC, Ruesch A, Bennett K, Bronkhorst M, Balfour S, Moss SEW, Milne R, Tyack PL, Kainerstorfer JM, Hastie GD. Shining new light on sensory brain activation and physiological measurement in seals using wearable optical technology. Philos Trans R Soc Lond B Biol Sci 2021; 376:20200224. [PMID: 34121458 PMCID: PMC8200653 DOI: 10.1098/rstb.2020.0224] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 11/23/2020] [Indexed: 12/19/2022] Open
Abstract
Sensory ecology and physiology of free-ranging animals is challenging to study but underpins our understanding of decision-making in the wild. Existing non-invasive human biomedical technology offers tools that could be harnessed to address these challenges. Functional near-infrared spectroscopy (fNIRS), a wearable, non-invasive biomedical imaging technique measures oxy- and deoxyhaemoglobin concentration changes that can be used to detect localized neural activation in the brain. We tested the efficacy of fNIRS to detect cortical activation in grey seals (Halichoerus grypus) and identify regions of the cortex associated with different senses (vision, hearing and touch). The activation of specific cerebral areas in seals was detected by fNIRS in responses to light (vision), sound (hearing) and whisker stimulation (touch). Physiological parameters, including heart and breathing rate, were also extracted from the fNIRS signal, which allowed neural and physiological responses to be monitored simultaneously. This is, to our knowledge, the first time fNIRS has been used to detect cortical activation in a non-domesticated or laboratory animal. Because fNIRS is non-invasive and wearable, this study demonstrates its potential as a tool to quantitatively investigate sensory perception and brain function while simultaneously recording heart rate, tissue and arterial oxygen saturation of haemoglobin, perfusion changes and breathing rate in free-ranging animals. This article is part of the theme issue 'Measuring physiology in free-living animals (Part I)'.
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Affiliation(s)
- J. Chris McKnight
- Sea Mammal Research Unit, Scottish Oceans Institute, University of St Andrews, St Andrews, UK
| | - Alexander Ruesch
- Department of Biomedical Engineering, Carnegie Mellon University, 5000 Forbes Avenue, Pittsburgh, PA 15213, USA
| | - Kimberley Bennett
- Division of Science, School of Engineering and Technology, Abertay University, Dundee, UK
| | - Mathijs Bronkhorst
- Artinis Medical Systems BV, Einsteinweg 17, 6662 PW Elst, The Netherlands
| | - Steve Balfour
- Sea Mammal Research Unit Instrumentation Group, Scottish Oceans Institute, University of St Andrews, St Andrews, UK
| | - Simon E. W. Moss
- Sea Mammal Research Unit, Scottish Oceans Institute, University of St Andrews, St Andrews, UK
| | - Ryan Milne
- Sea Mammal Research Unit, Scottish Oceans Institute, University of St Andrews, St Andrews, UK
| | - Peter L. Tyack
- Sea Mammal Research Unit, Scottish Oceans Institute, University of St Andrews, St Andrews, UK
| | - Jana M. Kainerstorfer
- Department of Biomedical Engineering, Carnegie Mellon University, 5000 Forbes Avenue, Pittsburgh, PA 15213, USA
- Department of Biomedical Engineering, Carnegie Mellon University, 5000 Forbes Ave., Pittsburgh, PA 15213, USA
| | - Gordon D. Hastie
- Sea Mammal Research Unit, Scottish Oceans Institute, University of St Andrews, St Andrews, UK
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26
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Alsabagh A, Aboulrous AA, Abdelhamid MM, Mahmoud T, Haddad AS, Rafati R. Improvement of Heavy Oil Recovery by Nonionic Surfactant/Alcohol Flooding in Light of the Alkane Carbon Number and Interfacial Tension Properties. ACS Omega 2021; 6:18668-18683. [PMID: 34337206 PMCID: PMC8319945 DOI: 10.1021/acsomega.1c01373] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/14/2021] [Accepted: 06/24/2021] [Indexed: 06/13/2023]
Abstract
In this work, we prepared nonionic surfactants from waste cooking oil materials. Hydrolysis was carried out for palm and palm kernel waste cooking oils to get a mixture of free fatty acids. The mixture of free acids was esterified with sorbitan and then ethoxylated at different ethylene oxide units. Two surfactants exhibited promising surface-active properties among the six prepared surfactants based on the results of surface tension. The interfacial tension (IFT) around the critical micelle concentration was measured against a series of n-hydrocarbon to detect the minimum alkane carbon number (ACN) (Πmin) for each of these surfactants. The effect of normal and branched alcohols on Πmin was also studied to design the surfactant/alcohol mixture for the chemical flooding process. From the results of IFT, the ethoxylated ester derivatives of palm kernel fatty acids (EPK-20) exhibited minimum IFT γmin (0.06 mN m-1) at Πmin equal to 12, and the ethoxylated ester derivatives of palm fatty acids (EP-40) achieved γmin equal to 0.09 mN m-1 at Πmin of 10. Branched alcohols shifted Πmin to a higher value to reach the equivalent ACN of the crude oil and decrease the IFT to lower values. The flooding process showed that the maximum oil recovery was obtained by EPK-20 (54.2% when used purely and 66.2% when used with isoamyl alcohol). In comparison, EP-40 exhibited that oil recovery equals 46% without alcohol and 46.4% with iso-butanol alcohol. The results were interpreted and discussed based on interfacial properties, wettability alteration, and the ACN.
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Affiliation(s)
- Ahmad
Mohamed Alsabagh
- Petroleum
Application Department, Egyptian Petroleum
Research Institute, Cairo 11727, Egypt
| | - Amany A. Aboulrous
- Production
Department, Egyptian Petroleum Research
Institute Cairo 11727, Egypt
| | | | - Tahany Mahmoud
- Petroleum
Application Department, Egyptian Petroleum
Research Institute, Cairo 11727, Egypt
| | - Amin Sharifi Haddad
- School
of Engineering, Kings College, University
of Aberdeen, Aberdeen AB24 3UE, U.K.
| | - Roozbeh Rafati
- School
of Engineering, Kings College, University
of Aberdeen, Aberdeen AB24 3UE, U.K.
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27
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Cao Y, Wood S, Richheimer F, Blakesley J, Young RJ, Castro FA. Enhancing and quantifying spatial homogeneity in monolayer WS 2. Sci Rep 2021; 11:14831. [PMID: 34290292 PMCID: PMC8295334 DOI: 10.1038/s41598-021-94263-9] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2021] [Accepted: 07/05/2021] [Indexed: 11/17/2022] Open
Abstract
Controlling the radiative properties of monolayer transition metal dichalcogenides is key to the development of atomically thin optoelectronic devices applicable to a wide range of industries. A common problem for exfoliated materials is the inherent disorder causing spatially varying nonradiative losses and therefore inhomogeneity. Here we demonstrate a five-fold reduction in the spatial inhomogeneity in monolayer WS2, resulting in enhanced overall photoluminescence emission and quality of WS2 flakes, by using an ambient-compatible laser illumination process. We propose a method to quantify spatial uniformity using statistics of spectral photoluminescence mapping. Analysis of the dynamic spectral changes shows that the enhancement is due to a spatially sensitive reduction of the charged exciton spectral weighting. The methods presented here are based on widely adopted instrumentation. They can be easily automated, making them ideal candidates for quality assessment of transition metal dichalcogenide materials, both in the laboratory and industrial environments.
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Affiliation(s)
- Yameng Cao
- National Physical Laboratory, Hampton Road, Teddington, TW11, 0LW, UK.
| | - Sebastian Wood
- National Physical Laboratory, Hampton Road, Teddington, TW11, 0LW, UK
| | - Filipe Richheimer
- National Physical Laboratory, Hampton Road, Teddington, TW11, 0LW, UK
| | - J Blakesley
- National Physical Laboratory, Hampton Road, Teddington, TW11, 0LW, UK
| | - Robert J Young
- Department of Physics, Lancaster University, Lancaster, LA1 4YB, UK
| | - Fernando A Castro
- National Physical Laboratory, Hampton Road, Teddington, TW11, 0LW, UK
- Advanced Technology Institute, University of Surrey, Guildford, GU2 7XH, Surrey, UK
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Farzaneh T, Freemont PS. Biofoundries are a nucleating hub for industrial translation. Synth Biol (Oxf) 2021; 6:ysab013. [PMID: 34712838 PMCID: PMC8546609 DOI: 10.1093/synbio/ysab013] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2021] [Revised: 05/13/2021] [Accepted: 05/19/2021] [Indexed: 11/23/2022] Open
Abstract
Contemporary synthetic biology embraces the entire innovation pipeline; it is a transformative technology platform impacting new applications and improving existing industrial products and processes. However, challenges still emerge at the interface of upstream and downstream processes, integral to the value chain. It is now clear that biofoundries have a key role to play in addressing this; they provide unique and accessible infrastructure to drive the standardization necessary to deliver systematic design and engineering of biological systems and workflows. As for other biofoundries, the success of the London Biofoundry has been in part due to its expertise in establishing channels for industrial translation through its extensive strategic collaborations. It has also become cemented as a key component of various consortia and partnerships that serve the broader bioeconomy and industrial strategies. Adopting a networked approach enables links to be made between infrastructure, researchers, industrialists and policy makers to de-risk the economic challenges of scale-up, as well as contribute to the growing bioeconomy.
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Affiliation(s)
- Tabasum Farzaneh
- UK Innovation and Knowledge Centre for Synthetic Biology (SynbiCITE) and the London Biofoundry, Imperial College Translation & Innovation Hub, London, UK
- Section of Structural and Synthetic Biology, Department of Infectious Disease, Imperial College London, London, UK
| | - Paul S Freemont
- UK Innovation and Knowledge Centre for Synthetic Biology (SynbiCITE) and the London Biofoundry, Imperial College Translation & Innovation Hub, London, UK
- Section of Structural and Synthetic Biology, Department of Infectious Disease, Imperial College London, London, UK
- UK Dementia Research Institute Care Research and Technology Centre, Imperial College London, London, UK
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Dickinson EJF, Smith G. Modelling the Proton-Conductive Membrane in Practical Polymer Electrolyte Membrane Fuel Cell (PEMFC) Simulation: A Review. Membranes (Basel) 2020; 10:E310. [PMID: 33126688 PMCID: PMC7692588 DOI: 10.3390/membranes10110310] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/01/2020] [Revised: 10/21/2020] [Accepted: 10/22/2020] [Indexed: 11/23/2022]
Abstract
Theoretical models used to describe the proton-conductive membrane in polymer electrolyte membrane fuel cells (PEMFCs) are reviewed, within the specific context of practical, physicochemical simulations of PEMFC device-scale performance and macroscopically observable behaviour. Reported models and their parameterisation (especially for Nafion 1100 materials) are compiled into a single source with consistent notation. Detailed attention is given to the Springer-Zawodzinski-Gottesfeld, Weber-Newman, and "binary friction model" methods of coupling proton transport with water uptake and diffusive water transport; alongside, data are compiled for the corresponding parameterisation of proton conductivity, water sorption isotherm, water diffusion coefficient, and electroosmotic drag coefficient. Subsequent sections address the formulation and parameterisation of models incorporating interfacial transport resistances, hydraulic transport of water, swelling and mechanical properties, transient and non-isothermal phenomena, and transport of dilute gases and other contaminants. Lastly, a section is dedicated to the formulation of models predicting the rate of membrane degradation and its influence on PEMFC behaviour.
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Mykkänen E, Bera A, Lehtinen JS, Ronzani A, Kohopää K, Hönigl-Decrinis T, Shaikhaidarov R, de Graaf SE, Govenius J, Prunnila M. Enhancement of Superconductivity by Amorphizing Molybdenum Silicide Films Using a Focused Ion Beam. Nanomaterials (Basel) 2020; 10:E950. [PMID: 32429333 PMCID: PMC7279340 DOI: 10.3390/nano10050950] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/14/2020] [Revised: 05/04/2020] [Accepted: 05/12/2020] [Indexed: 11/26/2022]
Abstract
We have used focused ion beam irradiation to progressively cause defects in annealed molybdenum silicide thin films. Without the treatment, the films are superconducting with critical temperature of about 1 K. We observe that both resistivity and critical temperature increase as the ion dose is increased. For resistivity, the increase is almost linear, whereas critical temperature changes abruptly at the smallest doses and then remains almost constant at 4 K. We believe that our results originate from amorphization of the polycrystalline molybdenum silicide films.
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Affiliation(s)
- Emma Mykkänen
- VTT Technical Research Centre of Finland Ltd, P.O. Box 1000, FI-02044 VTT Espoo, Finland; (A.B.); (J.S.L.); (A.R.); (K.K.); (J.G.); (M.P.)
| | - Arijit Bera
- VTT Technical Research Centre of Finland Ltd, P.O. Box 1000, FI-02044 VTT Espoo, Finland; (A.B.); (J.S.L.); (A.R.); (K.K.); (J.G.); (M.P.)
| | - Janne S. Lehtinen
- VTT Technical Research Centre of Finland Ltd, P.O. Box 1000, FI-02044 VTT Espoo, Finland; (A.B.); (J.S.L.); (A.R.); (K.K.); (J.G.); (M.P.)
| | - Alberto Ronzani
- VTT Technical Research Centre of Finland Ltd, P.O. Box 1000, FI-02044 VTT Espoo, Finland; (A.B.); (J.S.L.); (A.R.); (K.K.); (J.G.); (M.P.)
| | - Katja Kohopää
- VTT Technical Research Centre of Finland Ltd, P.O. Box 1000, FI-02044 VTT Espoo, Finland; (A.B.); (J.S.L.); (A.R.); (K.K.); (J.G.); (M.P.)
| | - Teresa Hönigl-Decrinis
- National Physical Laboratory, Hampton Road, Teddington TW11 0LW, UK; (T.H.-D.); (S.E.d.G.)
| | - Rais Shaikhaidarov
- Royal Holloway, University of London, Egham TW20 0EX, UK;
- Moscow Institute of Physics and Technology, 141700 Dolgoprudny, Russia
| | - Sebastian E. de Graaf
- National Physical Laboratory, Hampton Road, Teddington TW11 0LW, UK; (T.H.-D.); (S.E.d.G.)
| | - Joonas Govenius
- VTT Technical Research Centre of Finland Ltd, P.O. Box 1000, FI-02044 VTT Espoo, Finland; (A.B.); (J.S.L.); (A.R.); (K.K.); (J.G.); (M.P.)
| | - Mika Prunnila
- VTT Technical Research Centre of Finland Ltd, P.O. Box 1000, FI-02044 VTT Espoo, Finland; (A.B.); (J.S.L.); (A.R.); (K.K.); (J.G.); (M.P.)
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