Assessment of seasonal variations in particulate matter accumulation and elemental composition in urban tree species

Outdoor air pollution in urban areas, especially particulate matter (PM), is harmful to human health. Urban trees and shrubs provide crucial ecosystem services such as air pollution mitigation by acting as natural filters. However, urban greenery comprises a particular biodiversity, and different plant species vary in their capacity to accumulate PM. Twenty-two plant species were analyzed and selected according to their leaf traits, the different fractions of PM accumulated on the leaves (large - PML, coarse - PMC, and fine - PMF) and their chemical composition. The study was conducted in four city zones: urban traffic (UT), urban background (UB), industrial (IND), and rural (RUR), comparing winter (W) and summer (S) seasons. The average PM levels in the air and accumulated on the leaves were higher in W than in S season. During both seasons, the highest PM accumulated on the leaves was recorded at the UT zone. Nine species were selected as the most suitable for accumulating PML, seven as the most efficient for accumulating PMC, and six for accumulating PMF. The leaf area and leaf roundness were correlated negatively with PM accumulation. The evergreen species L. nobilis was indicated as suitable for dealing with air pollution based on PM10 and PM2.5 values recorded in the air. Regarding the PM element and metal composition, L. nobilis, Photinia x fraseri, Olea europaea, Quercus ilex and Nerium oleander were selected as species with notable elements and metal accumulation. In summary, the study identified species with higher PM accumulation capacity and assessed the seasonal PM accumulation patterns in different city zones, providing insights into the species interactions with PM and their potential for monitoring and coping with air pollution.

Multi-scale datasets for monitoring Mediterranean oak forests from optical remote sensing during the SENTHYMED/MEDOAK experiment in the north of Montpellier (France)

Mediterranean forests represent critical areas that are increasingly affected by the frequency of droughts and fires, anthropic activities and land use changes. Optical remote sensing data give access to several essential biodiversity variables, such as species traits (related to vegetation biophysical and biochemical composition), which can help to better understand the structure and functioning of these forests. However, their reliability highly depends on the scale of observation and the spectral configuration of the sensor. Thus, the objective of the SENTHYMED/MEDOAK experiment is to provide datasets from leaf to canopy scale in synchronization with remote sensing acquisitions obtained from multi-platform sensors having different spectral characteristics and spatial resolutions. Seven monthly data collections were performed between April and October 2021 (with a complementary one in June 2023) over two forests in the north of Montpellier, France, comprised of two oak endemic species with different phenological dynamics (evergreen: Quercus ilex and deciduous: Quercus pubescens) and a variability of canopy cover fractions (from dense to open canopy). These collections were coincident with satellite multispectral Sentinel-2 data and one with airborne hyperspectral AVIRIS-Next Generation data. In addition, satellite hyperspectral PRISMA and DESIS were also available for some dates. All these airborne and satellite data are provided from free online download websites. Eight datasets are presented in this paper from thirteen studied forest plots: (1) overstory and understory inventory, (2) 687 canopy plant area index from Li-COR plant canopy analyzers, (3) 1475 in situ spectral reflectances (oak canopy, trunk, grass, limestone, etc.) from ASD spectroradiometers, (4) 92 soil moistures and temperatures from IMKO and Campbell probes, (5) 747 leaf-clip optical data from SPAD and DUALEX sensors, (6) 2594 in-lab leaf directional-hemispherical reflectances and transmittances from ASD spectroradiometer coupled with an integrating sphere, (7) 747 in-lab measured leaf water and dry matter content, and additional leaf traits by inversion of the PROSPECT model and (8) UAV-borne LiDAR 3-D point clouds. These datasets can be useful for multi-scale and multi-temporal calibration/validation of high level satellite vegetation products such as species traits, for current and future imaging spectroscopic missions, and by fusing or comparing both multispectral and hyperspectral data. Other targeted applications can be forest 3-D modelling, biodiversity assessment, fire risk prevention and globally vegetation monitoring.

Leaf traits of prickly ash and its correlation with ecological and geographical factors of origin

The morphological, physiological, and biochemical characteristics of leaves result from the long-term adaptation of plants to their environment and are closely related to plant growth and development. In this study, 37 prickly ash germplasm resources from 18 production areas were utilized as the subjects of research. Logistic equations, principal component analysis, and cluster analysis were employed to comprehensively evaluate the leaf traits of prickly ash germplasm resources, with an analysis of their correlation with ecological and geographical factors in the production areas. The results showed that the leaf traits of prickly ash germplasms of different origins are substantially different and diverse. The coefficient of variation for the 14 leaf traits was greater than 10%. The coefficient of variation of the compound leaflet number was the highest among all the considered leaf traits, and the coefficient of variation of leaf thickness was the lowest, at 49.86% and 11.37%, respectively. The leaf traits of the prickly ash germplasm originating from Chongqing in Yongchuan, Chongqing in Rongchang, and Yunnan in Honghe ranked highest, whereas the leaf traits of the prickly ash germplasm from Henan in Jiaozuo, Gansu in Tianshui, and Shanxi in Yuncheng ranked lowest. The results of the correlation analysis showed that among the ecological and geographical factors of the origins, latitude had the strongest correlation with the leaf traits of the prickly ash germplasm. As latitude increased, the leaves of prickly ash gradually decreased in size, weight, and leaf shape index. The factor with the second strongest correlation was temperature. The leaves of the prickly ash germplasm originating from warmer climate areas were larger and heavier than those from areas with colder climates. Altitude and longitude did not significantly affect the leaf traits of the prickly ash germplasm, but at similar latitudes, the leaves of the prickly ash germplasm in high-altitude areas were smaller, and the leaves of the prickly ash germplasm in low-altitude areas were larger. These findings can provide valuable references for breeding and the sustainable utilization of new varieties of prickly ash resources.

Overexpression of NtLHT1 affects the development of leaf morphology and abiotic tolerance in tobacco

LYSINE HISTIDINE TRANSPORTER1 (LHT1) is a crucial broad-specificity and high-affinity amino acid transporter affecting the uptake of nitrogen and probably the tolerance to abiotic stress in plants. However, little is known about the phenotypic functions of LHT1 in plant growth and development and abiotic stress tolerance. In this study, we identified the NtLHT1 gene from the tobacco variety Honghuadajinyuan (HD) and determined its important roles in leaf morphological development and plant resistance to abiotic stress. Comprehensive functional analyses using knockout and overexpression transgenic lines (ntlht1 and OE) revealed overexpression of NtLHT1 accelerated leave senescence and increased plant height, leaf number and plant tolerance under cold, salt and drought stresses. In addition, NtLHT1 overexpression significantly decreased the leaf elongation of HD, causing the leaves to change from a long-elliptical shape to an elliptical shape. However silencing NtLHT1 decreased the seed germination rate under NaCl and PEG stresses. Moreover, NtLHT1 significantly affected the contents of various amino acids, such as the neutral, acidic, non-polar and aromatic amino acids, ethylene precursor (ACC), GA3 and IAA in tobacco. These results suggested that the amino acid and ethylene precursor ACC transport activities of NtLHT1 provide fine regulatory function for plant growth and development and plant tolerance to abiotic stress.

Synergy of different leaf traits determines the particulate matter retention capacity and its susceptibility to rain wash-off

Rainfall plays a crucial role in the removal of particulate matter (PM) from plant leaves, influencing PM retention and the environmental behaviour of harmful substances that accumulate in PM. This study examined the PM retention capacity, particle size distributions, and wash-off rates of leaf surface PM from three common green tree species in northern China during two natural rainfall events (light rain: 8.3 mm; heavy rain: 54.2 mm), to investigate the relationship between the leaf traits, PM retention capacity, and PM wash-off process. Our results found that leaf morphometric characteristics, such as leaf size, length, width, and aspect ratio (length-to-width), had a negative and significant correlations with the PM retention capacity, but had no significant correlation with the leaf surface PM wash-off rate. Smaller leaves with low aspect ratios exhibited greater stability under external disturbances than large leaves with high aspect ratios, resulting in a higher PM retention capacity and lower wash-off rate. Ridges and grooves enhanced the PM retention capacity by increasing the leaf roughness. Rainfall could wash off all particle size ranges of leaf surface PM without altering their mechanical composition. Larger particles were more easily washed off. Euonymus japonicus, with its small leaf size and low aspect ratio, exhibited the highest PM retention capacity. Its curled leaf shape also hindered light rain from washing off leaf surface PM. Forsythia suspensa, with denser grooves and ridges compared with Prunus serrulata, exhibited a rougher leaf surface and higher PM retention capacity. However, this roughness may reduce wettability, making it easier for runoff to form on the leaf surface and dislodge leaf surface PM, resulting in F. suspensa having the highest wash-off rate. Our results highlight the synergy of different leaf traits on PM retention capacity and the PM stability after rainfall.

Impact of nitrogen application and crop stage on epiphytic microbial communities on silage maize leaf surfaces

This study aimed to examine the impact of nitrogen (N) fertilization on phyllosphere microorganisms in silage maize (Zea mays) to enhance the production of high-quality silage. The effects of different N application rates (160, 240, and 320 kg ha-1) and maturity stages (flowering and dough stages) on microbial diversity, abundance and physiochemical properties of the leaf surfaces were evaluated in a field experiment. The results showed that N application rates did not significantly impact the abundance of lactic acid bacteria (LAB), aerobic bacteria (AB), yeasts, or molds on the leaf surfaces. However, these microbes were more abundant during the flowering stage compared to the dough stage. Furthermore, the N application rate had no significant impact on inorganic phosphorus, soluble sugar, free amino acids, total phenolic content, and soluble protein concentrations, or pH levels on the leaf surfaces. Notably, these chemical indices were lower during the dough stage. The abundance of Pantoea decreased with higher N application rates, while that of other microorganisms did not changes significantly. The abundance of AB, LAB, yeasts, and molds were positively correlated with soluble sugar, soluble protein, inorganic phosphorus, free amino acids, and total phenolic concentrations on leaf surfaces. Moreover, water loss was negatively correlated with the abundance of AB, LAB, yeasts, and molds, whereas water retention capacity and stomatal density were positively correlated with microbial abundance. We recommend applying an optimal N rate of 160 kg ha-1 to silage maize and harvesting at the flowering stage is recommended.

Leaf phenotypic variation and its response to environmental factors in natural populations of Eucommia ulmoides

BACKGROUND

Eucommia ulmoides leaves have high medicinal and economic value as a dual-purpose substance for medicine and food. Employing leaves from 13 natural populations of Eucommia ulmoides as research objects, this study reveals the variation patterns of intra-specific and inter-specific trait variation and explores the response of leaf characteristics to geographical and climatic changes, aiming to provide a scientific basis for the efficient utilization of leaf resources and the breeding of superior varieties.

RESULTS

Descriptive statistical analysis and nested analysis of variance showed significant differences in 11 leaf traits of Eucommia ulmoides inter-populations and intra-populations, with an average coefficient of variation of 17.45%. The coefficient of variation for average leaf phenotypic traits is 20.77%, and the leaf phenotypic variation is mainly from the variation intra-populations. Principal component analysis reveals that the cumulative contribution rate of the top three principal components which mainly contributed to the phenotypic variation of Eucommia ulmoides leaves reached 74.98%, which could be sorted into size traits (34.57%), color traits (25.82%) and shape traits (14.58%). In addition, correlation analysis expresses there is a specific co-variation pattern among leaf traits, with a strong connection between shape, size, and color traits. Geographic and climatic distances are significantly correlated, and mantel test and correlation analysis indicate that leaf traits of Eucommia ulmoides are mainly influenced by altitude. With the increase of altitude, the leaves become smaller. Partial correlation analysis shows that after controlling climate factors, the correlation between some characters and geographical factors disappears significantly. Temperature and precipitation have a great influence on the variation of leaf phenotypic traits, and the larger the leaves are in areas with high temperature and heavy rainfall.

CONCLUSIONS

These findings contribute to a further understanding of the leaf morphological characteristics of Eucommia ulmoides and the extent to which the environment influences leaf trait variation. They can provide a scientific basis for the protection and application of Eucommia ulmoides leaf resources in the future.

Leaf trait responses to global change factors in terrestrial ecosystems

Global change influences plant growth by affecting plant morphology and physiology. However, the effects of global change factors vary based on the climate gradient. Here, we established a global database of leaf traits from 192 experiments on elevated CO2 concentrations (eCO2), drought, N deposition, and warming. The results showed that the leaf mass per area (LMA) significantly increased under eCO2 and drought conditions but decreased with N deposition, whereas eCO2 levels and drought conditions reduced stomatal conductance and increased and decreased photosynthetic rates, respectively. Leaf dark respiration (Rd) increased in response to global change, excluding N deposition. Leaf N concentrations declined with eCO2 but increased with N deposition. Leaf area increased with eCO2, N deposition, and warming but decreased with drought. Leaf thickness increased with eCO2 but decreased with warming. eCO2 and N deposition enhanced plant water-use efficiency (WUE), eCO2 and warming increased photosynthetic N-use efficiency (PNUE), while N fertilization reduced PNUE significantly. eCO2 produced a positive relationship between WUE and PNUE, which were limited under drought but increased in areas with high humidity and high temperature. Trade-offs were observed between WUE and PNUE under drought, N deposition, and warming. These findings suggest that the effects of global change factors on plants can be altered by complex environmental changes; moreover, diverse plant water and nutrient strategy responses can be interpreted against the background of their functional traits.

Environmental pollution biomonitoring around a cement factory based on the Air Pollution Tolerance Index of some tree species

The present study examined the ability of Quercus castaneifolia C.A.M., Parrotia persica C.A.M., and Carpinus betulus L. for environmental pollution biomonitoring based on the Air Pollution Tolerance Index (APTI). Four leaf traits, total leaf chlorophyll content, leaf extract pH, ascorbic acid content, and relative water content of leaf, were used to compute the APTI values. The study was conducted at five sites in the Hyrcanian forests at different distances from a cement factory close to the Neka city, northern Iran. Based on the results, a 22.5, 30.1, and 25.8% decrease was thus recorded in total chlorophyll content for Q. castaneifolia, P. persica, and C. betulus, respectively, compared to the reference site. However, ascorbic acid content shows an increment of 179.8, 116.8, and 97.3% for P. persica, C. betulus, and Q. castaneifolia, respectively, in the polluted sites as compared to the reference site. The relative water content of P. persica was significantly higher than of Q. castaneifolia and C. betulus in all studied sites. APTI was significantly different among the species, and P. persica was highly tolerant to air pollution, with the highest values of APTI ranging from 11.8 to 16.9. The APTI values of Q. castaneifolia ranged from 9.5 to 11.3 and showed an intermediate tolerance to air pollution. Also, the most sensitive species to air pollution was C. betulus, with a range of 6.6-7.9 in APTI values. Based on APTI values, it can be suggested that P. persica can be used as a biomonitor, while C. betulus can be used as a bioindicator for atmospheric dust deposition and heavy metal pollution.

Leaf defenses of subtropical deciduous and evergreen trees to varying intensities of herbivory

Generally, deciduous and evergreen trees coexist in subtropical forests, and both types of leaves are attacked by numerous insect herbivores. However, trees respond and defend themselves from herbivores in different ways, and these responses may vary between evergreen and deciduous species. We examined both the percentage of leaf area removed by herbivores as well as the percentage of leaves attacked by herbivores to evaluate leaf herbivore damage across 14 subtropical deciduous and evergreen tree species, and quantified plant defenses to varying intensities of herbivory. We found that there was no significant difference in mean percentage of leaf area removed between deciduous and evergreen species, yet a higher mean percentage of deciduous leaves were damaged compared to evergreen leaves (73.7% versus 60.2%). Although percent leaf area removed was mainly influenced by hemicellulose concentrations, there was some evidence that the ratio of non-structural carbohydrates:lignin and the concentration of tannins contribute to herbivory. We also highlight that leaf defenses to varying intensities of herbivory varied greatly among subtropical plant species and there was a stronger response for deciduous trees to leaf herbivore (e.g., increased nitrogen or lignin) attack than that of evergreen trees. This work elucidates how leaves respond to varying intensities of herbivory, and explores some of the underlying relationships between leaf traits and herbivore attack in subtropical forests.

Particulate matter accumulation by tree foliage is driven by leaf habit types, urbanization- and pollution levels

Particulate matter (PM) pollution poses a significant threat to human health. Greenery, particularly trees, can act as effective filters for PM, reducing associated health risks. Previous studies have indicated that tree traits play a crucial role in determining the amount of PM accumulated on leaves, although findings have often been site-specific. To comprehensively investigate the key factors influencing PM binding to leaves across diverse tree species and geographical locations, we conducted an extensive analysis using data extracted from 57 publications. The data covers 11 countries and 190 tree species from 1996 to 2021. We categorized tree species into functional groups: evergreen conifers, deciduous conifers, deciduous broadleaves, and evergreen broadleaves based on leaf habit and phylogeny. Evergreen conifers exhibited the highest PM accumulation on leaves, and in general, evergreen leaves accumulated more PM compared to deciduous leaves across all PM size classes. Specific leaf traits, such as epicuticular wax, played a significant role. The highest PM loads on leaves were observed in peri-urban areas along the rural-peri-urban-urban gradient. However, the availability of global data was skewed, with most data originating from urban and peri-urban areas, primarily from China and Poland. Among different climate zones, substantial data were only available for warm temperate and cold steppe climate zones. Understanding the problem of PM pollution and the role of greenery in urban environments is crucial for monitoring and controlling PM pollution. Our systematic review of the literature highlights the variation on PM loading among different vegetation types with varying leaf characteristics. Notably, epicuticular wax emerged as a marker trait that exhibited variability across PM size fractions and different vegetation types. In conclusion, this review emphasizes the importance of greenery in mitigation PM pollution. Our findings underscore the significance of tree traits in PM binding. However, lack of data stresses the need for further research and data collection initiatives.

Short wind pulses consistently change the morphology of roots, but not of shoots, across young plants of different growth forms

Wind is an environmental stimulus that stresses plants of all growth forms at all life-stages by influencing the development, architecture, and morphology of roots and shoots. However, comparative studies are scarce and no study directly investigated whether shoot and root morphological traits of trees, grasses and forbs differ in their response to short wind pulses of different wind intensity. In this study, we found that across species, wind stress by short wind pulses of increasing intensity consistently changed root morphology, but did not affect shoot morphological traits, except plant height in four species. Wind effects in roots were generally weak in tree species but consistent across growth forms. Furthermore, plant height of species was correlated with changes in specific root length and average diameter.Our results indicate that short-pulse wind treatments affect root morphology more than shoot morphology across growth forms. They further suggest that wind stress possibly promotes root anchorage in young plants and that these effects might depend on plant height.

Water causes divergent responses of specific carbon sink to long-term grazing in a desert grassland

Heavy grazing generally reduces grassland biomass, further decreasing its carbon sink. Grassland carbon sink is determined by both plant biomass and carbon sink per unit biomass (specific carbon sink). This specific carbon sink could reflect grassland adaptative response, because plants generally tend to adaptively enhance the functioning of their remaining biomass after grazing (i.e. higher leaf nitrogen content). Though we know well about the regulation of grassland biomass on carbon sink, little attention is paid to the role of specific carbon sink. Thus, we conducted a 14-year grazing experiment in a desert grassland. Ecosystem carbon fluxes, including net ecosystem CO₂ exchange (NEE), gross ecosystem productivity (GEP) and ecosystem respiration (ER), were measured frequently during five consecutive growing seasons with contrasting precipitation events. We found that heavy grazing reduced NEE more in drier (-94.0 %) than wetter (-33.9 %) years. However, grazing did not reduce community biomass much more in drier (-70.4 %) than wetter years (-66.0 %). These meant a positive response of specific NEE (NEE per unit biomass) to grazing in wetter years. This positive response of specific NEE was mainly caused by a higher biomass ratio of other species versus perennial grasses with greater leaf nitrogen content and specific leaf area in wetter years. In addition, we also detected a shift of grazing effects on specific NEE from positive in wetter years to negative in drier years. Overall, this study is among the first to reveal the adaptive response of grassland specific carbon sink to experimental grazing in plant trait view. The stimulation response of specific carbon sink can partially compensate for the loss of grassland carbon storage under grazing. These new findings highlight the role of grassland adaptive response in decelerating climate warming.

Leaf Species-Dependent Fungicide Effects on the Function and Abundance of Associated Microbial Communities

Microbially-mediated leaf litter decomposition is a critical ecosystem function in running waters within forested areas, which can be affected by fungicides. However, fungicide effects on leaf litter decomposition have been investigated almost exclusively with black alder leaves, a leaf species with traits favourable to consumers (i.e., low recalcitrance and high nutrient content). At the same time, little is known about fungicide effects on microbial colonisation and decomposition of other leaf species with less favourable traits. In this 21 day lasting study, we explore the effects of increasing fungicide sum concentrations (0-3000 µg/L) on microbial colonisation and decomposition of three leaf species (black alder, Norway maple and European beech) differing in terms of recalcitrance and nutrient content. Leaf litter decomposition rate, leaf-associated fungal biomass and bacterial density were quantified to observe potential effects at the functional level. Beech, as the species with the least favourable leaf traits, showed a substantially lower decomposition rate (50%) in absence of fungicides than alder and maple. In the presence of high fungicide concentrations (300-3000 µg/L), beech showed a concentration-related decrease not only in microbial leaf litter decomposition but also fungal biomass. This suggests that favourable traits of leaf litter (as for alder and maple) enable leaf-associated microorganisms to acquire leaf-bound energy more easily to withstand potential effects induced by fungicide exposure. Our results indicate the need to deepen our understanding on how leaf species' traits interact with the impact of chemical stressors on the leaf decomposition activity of microbial communities.

Genome-wide association study of leaf-related traits in tea plant in Guizhou based on genotyping-by-sequencing

BACKGROUND

Studying the genetic characteristics of tea plant (Camellia spp.) leaf traits is essential for improving yield and quality through breeding and selection. Guizhou Plateau, an important part of the original center of tea plants, has rich genetic resources. However, few studies have explored the associations between tea plant leaf traits and single nucleotide polymorphism (SNP) markers in Guizhou.

RESULTS

In this study, we used the genotyping-by-sequencing (GBS) method to identify 100,829 SNP markers from 338 accessions of tea germplasm in Guizhou Plateau, a region with rich genetic resources. We assessed population structure based on high-quality SNPs, constructed phylogenetic relationships, and performed genome-wide association studies (GWASs). Four inferred pure groups (G-I, G-II, G-III, and G-IV) and one inferred admixture group (G-V), were identified by a population structure analysis, and verified by principal component analyses and phylogenetic analyses. Through GWAS, we identified six candidate genes associated with four leaf traits, including mature leaf size, texture, color and shape. Specifically, two candidate genes, located on chromosomes 1 and 9, were significantly associated with mature leaf size, while two genes, located on chromosomes 8 and 11, were significantly associated with mature leaf texture. Additionally, two candidate genes, located on chromosomes 1 and 2 were identified as being associated with mature leaf color and mature leaf shape, respectively. We verified the expression level of two candidate genes was verified using reverse transcription quantitative polymerase chain reaction (RT-qPCR) and designed a derived cleaved amplified polymorphism (dCAPS) marker that co-segregated with mature leaf size, which could be used for marker-assisted selection (MAS) breeding in Camellia sinensis.

CONCLUSIONS

In the present study, by using GWAS approaches with the 338 tea accessions population in Guizhou, we revealed a list of SNPs markers and candidate genes that were significantly associated with four leaf traits. This work provides theoretical and practical basis for the genetic breeding of related traits in tea plant leaves.

Effects of Leaf Morphological and Chemical Properties on the Population Sizes of Epiphytes

To explore the main factors affecting the distribution of microbes on leaf surfaces, the relationship between population sizes of epiphytes and the morphological structure and main physical and chemical properties of leaves from stylo (Stylosanthes guianensis), alfalfa (Medicago sativa), maize (Zea mays), and cocksfoot (Dactylis glomerata) were investigated. The research results showed that the contents of soluble sugar and total phenolics on the leaf surfaces were positively correlated with those in the leaf tissues (P < 0.001). The leaves with high wax content had better moisture retention capacity. The content of soluble sugar on the leaf surfaces was positively correlated with population sizes of lactic acid bacteria (LAB), aerobic bacteria, yeasts, and molds (P < 0.001). Likewise, a positive correlation was found between the content of inorganic phosphorus on the leaf surfaces and population sizes of LAB and aerobic bacteria. The total amount of wax on leaf surfaces was negatively related to population sizes of microbes, especially aerobic bacteria (P < 0.01) and molds (P < 0.001). On the contrary, the presence of trichomes provides a shelter for epiphytes and was positively correlated with population sizes of epiphytes at different degrees of significance. In conclusion, population sizes of epiphytes on the leaf surfaces were not only affected by chemical properties, but also by morphological traits of leaves.

An integrated leaf trait analysis of two Paleogene leaf floras

Objectives

This study presents the Integrated Leaf Trait Analysis (ILTA), a workflow for the combined application of methodologies in leaf trait and insect herbivory analyses on fossil dicot leaf assemblages. The objectives were (1) to record the leaf morphological variability, (2) to describe the herbivory pattern on fossil leaves, (3) to explore relations between leaf morphological trait combination types (TCTs), quantitative leaf traits, and other plant characteristics (e.g., phenology), and (4) to explore relations of leaf traits and insect herbivory.

Material and Methods

The leaves of the early Oligocene floras Seifhennersdorf (Saxony, Germany) and Suletice-Berand (Ústí nad Labem Region, Czech Republic) were analyzed. The TCT approach was used to record the leaf morphological patterns. Metrics based on damage types on leaves were used to describe the kind and extent of insect herbivory. The leaf assemblages were characterized quantitatively (e.g., leaf area and leaf mass per area (LM_A)) based on subsamples of 400 leaves per site. Multivariate analyses were performed to explore trait variations.

Results

In Seifhennersdorf, toothed leaves of TCT F from deciduous fossil-species are most frequent. The flora of Suletice-Berand is dominated by evergreen fossil-species, which is reflected by the occurrence of toothed and untoothed leaves with closed secondary venation types (TCTs A or E). Significant differences are observed for mean leaf area and LM_A, with larger leaves tending to lower LM_A in Seifhennersdorf and smaller leaves tending to higher LM_A in Suletice-Berand. The frequency and richness of damage types are significantly higher in Suletice-Berand than in Seifhennersdorf. In Seifhennersdorf, the evidence of damage types is highest on deciduous fossil-species, whereas it is highest on evergreen fossil-species in Suletice-Berand. Overall, insect herbivory tends to be more frequently to occur on toothed leaves (TCTs E, F, and P) that are of low LM_A. The frequency, richness, and occurrence of damage types vary among fossil-species with similar phenology and TCT. In general, they are highest on leaves of abundant fossil-species.

Discussion

TCTs reflect the diversity and abundance of leaf architectural types of fossil floras. Differences in TCT proportions and quantitative leaf traits may be consistent with local variations in the proportion of broad-leaved deciduous and evergreen elements in the ecotonal vegetation of the early Oligocene. A correlation between leaf size, LM_A, and fossil-species indicates that trait variations are partly dependent on the taxonomic composition. Leaf morphology or TCTs itself cannot explain the difference in insect herbivory on leaves. It is a more complex relationship where leaf morphology, LM_A, phenology, and taxonomic affiliation are crucial.

Composition and size of retained aerosol particles on urban plants: Insights into related factors and potential impacts

The role of plants in alleviating aerosol pollution has drawn extensive attention. Most studies focus on compositions of aerosol particles on urban plants, while the leaf traits related to particle retention have not yet been intensively studied. This study selected five typical urban plants (Loropetalum chinense, Rhododendron simsii, Euonymus japonicus, Photinia × fraseri, Osmanthus fragrans), and employed scanning electron microscope (SEM) and ion chromatography, aiming to investigate the accumulation features of aerosol particles and the relationships between leaf traits and particle retention. Results show that aerosol particles were mainly retained on the adaxial leaf surface, the fine particles (Φ ≤ 2.5 μm) were the predominant components (77.8 % by number) on the leaves, and the dominant water-soluble ions of particles were Ca²⁺, SO₄^2-, and NO₃^-. By comparison, E. japonicus and P. fraseri were efficient in the retention of fine and coarse particles (2.5 <Φ ≤ 10 μm), but L. chinense was capable to retain more large particles (Φ > 10 μm). The correlation analysis indicates that leaf traits are closely related to the accumulation of aerosol particles. The result shows that plant leaves with larger stomatal area, lower stomatal density, smaller specific leaf area and higher in epicuticular wax content can retain more aerosol particles. This result indicates that the leaves are capable of retaining aerosol particles via the synergy of multiple leaf traits, such as higher wax content and the fewer but larger stomata on their leaf surfaces. This study is helpful to understand the interactions between leaf traits and particle retention, and it further contributes to the selection of potential dust-retaining plants, which is of great significance for the alleviation of urban air pollution.

Species-specific efficiency in PM2.5 removal by urban trees: From leaf measurements to improved modeling estimates

The growing population in cities is causing a deterioration of air quality due to the emission of pollutants, causing serious health impacts. Trees and urban forests can contribute through the interception and removal of air pollutants such as particulate matter (PM). The dry deposition of PM by vegetation depends on air pollutant concentration, meteorological conditions, and specific leaf traits. Several studies explored the ability of different plant species to accumulate PM on leaf structures leading to the development of models to quantify the PM removal. The i-Tree Eco is the most used model to evaluate ecosystem services provided by urban trees. However, fine particulate matter (PM_2.5) removal is still calculated with a poorly evaluated function of deposition velocity (which depends on wind speed and leaf area) without differentiating between tree species. Therefore, we present an improvement of the standard model calculation introducing a leaf trait index to distinguish the species effect on PM net removal. We also compared model results with measurements of deposited leaf PM by vacuum filtration. The index includes the effect of morphological and functional leaf characteristics of tree species using four parameters: leaf water storage, deposition velocity, resuspension rate and leaf washing capacity. Leaves of 11 common urban tree species were sampled in representative areas of the city of Ferrara (Italy) and at different times of the year from 2018 to 2021. This includes four deciduous broadleaf trees (Tilia cordata, Platanus acerifolia, Acer platanoides, Celtis australis), three evergreen broadleaf trees (Quercus ilex, Magnolia grandiflora, Nerium oleander), and four conifers (Thuja orientalis, Cedrus libani, Pinus pinaster, Picea abies). The results provide significant advancement in assessing PM removal using decision support tools such as models to properly select tree species for future urban tree planting programs aimed at improving air quality.

Construction of a highly saturated genetic map and identification of quantitative trait loci for leaf traits in jujube

Chinese jujube (Ziziphus jujuba Mill.), a member of the genus Ziziphus, which comes under the family Rhamnaceae, is the most important species in terms of its economic, ecological, and social benefits. To dissect the loci associated with important phenotypical traits and analyze their genetic and genomic information in jujube, a whole-genome resequencing (WGR) based highly saturated genetic map was constructed using an F1 hybrid population of 140 progeny individuals derived from the cross of 'JMS2' × 'Jiaocheng 5'. The average sequencing depth of the parents was 14.09× and that of the progeny was 2.62×, and the average comparison efficiency between the sample and the reference genome was 97.09%. Three sets of genetic maps were constructed for a female parent, a male parent, and integrated. A total of 8,684 markers, including 8,158 SNP and 526 InDel markers, were evenly distributed across all 12 linkage groups (LGs) in the integrated map, spanning 1,713.22 cM with an average marker interval of 0.2 cM. In terms of marker number and density, this is the most saturated genetic map of jujube to date, nearly doubling that of the best ones previously reported. Based on this genetic map and phenotype data from 2019 to 2021, 31 leaf trait QTLs were identified in the linkage groups (LG1, 15; LG3, 1; LG5, 8; LG7, 4; LG8, 1, and LG11, 2), including 17 major QTLs. There were 4, 8, 14, and 5 QTLs that contributed to leaf length, leaf width, leaf shape index, and leaf area, respectively. Six QTLs clusters were detected on LG1 (8.05 cM-9.52 cM; 13.12 cM-13.99 cM; 123.84 cM-126.09 cM), LG5 (50.58 cM-50.86 cM; 80.10 cM-81.76 cM) and LG11 (35.98 cM-48.62 cM). Eight candidate genes were identified within the QTLs cluster regions. Annotation information showed that 4 genes (LOC107418196, LOC107418241, LOC107417968, and LOC112492570) in these QTLs are related to cell division and cell wall integrity. This research will provide a valuable tool for further QTL analysis, candidate gene identification, map-based gene cloning, comparative mapping, and marker-assisted selection (MAS) in jujube.

Application of fertilization in changing light adaptability and improving growth of Aralia elata (Miq.) Seem. seedlings under various light conditions in temperate forests

Non-timber forest plants have always played a significant role in livelihood security by providing valuable non-timber forest products, especially in less-developed countries. Artificial cultivation is a key approach to sustainably develop non-timber forest plants, for which, in-forest planting is vital. Light conditions in forests severely affect in-forest planting, and the growth of many plants may be restricted due to inappropriate light conditions. Thus, to fully and effectively utilize forest spaces with various light environments, fertilization, as an important practice to supply nutrients for promoting plant growth, was selected to mitigate light constraints in forests. Aralia elata (a valuable non-timber forest plant species) was chosen as the subject to explore the effects of fertilization on photosynthetic and morphological adaptation to light and the growth of in-forest planted seedlings by simulating different light environments. The results showed that the effects of fertilization on light adaptability (i.e., photosynthesis and leaf traits) of A. elata seedlings were limited; that is, only the variations in light-saturated photosynthetic net rate (P_Nmax), specific leaf area (SLA), and chlorophyll (Chl) content of A. elata seedlings between different shade intensities were noticeably affected by fertilization. Fertilization was positive for growth, and a half fertilization treatment (50 g per plot) was optimum for improving the growth of A. elata seedlings under light conditions of 0-75% shade intensities. These results can provide some practical references for the application of fertilization in in-forest planting and management of transplanted non-timber forest plant seedlings under various light conditions in the forests.

Variation of plant CSR strategies across a precipitation gradient in the alpine grasslands on the northern Tibet Plateau

Identifying ecological strategies based on functional traits can help us better understand plants' adaptations and changes in ecological processes, and thus predict the impact of climate change on ecosystems, especially in the vulnerable alpine grasslands. Herein, we investigated the plant CSR strategies of four grassland types (alpine meadows, AM; alpine meadow steppes, AMS; alpine steppes, AS; and alpine desert steppes, ADS) and its functional groups (grasses, sedges, legumes, and forbs) along the east-to-west gradient of decreasing precipitation on the northern Tibetan grasslands by using Grime's CSR (C: competitor, S: stress tolerator, and R: ruderal) analysis. Although alpine grasslands were dominated by S-strategy, our results also indicated that AM with higher water, nitrogen (N) and phosphorus (P) availability had significantly lower S-strategy values and relatively higher C- and R-strategy values (C: S: R = 6: 63: 31 %) than those in AMS (C: S: R = 3: 94: 3 %,), AS (C: S: R = 3: 87: 10 %), and ADS (C: S: R = 1: 94: 5 %). The CSR strategy values of forbs and legumes showed greater variability compared with grasses and sedges in the environmental gradient. Furthermore, water variability on the precipitation gradient eventually affected plant traits and CSR strategies through soil N and P availability and pH. Our findings highlighted that plant CSR strategies were regulated by the availability of soil resources, and plants adopted more flexible adaptation strategies in relatively resource-rich environments. This study sheds light on the mechanisms of plant adaptation to the changing environment in the alpine grasslands.

Leaf physiological traits of plants from the Qinghai-Tibet Plateau and other arid sites in China: Identifying susceptible species and well-adapted extremophiles

Extreme environments, such as deserts and high-elevation ecosystems, are very important from biodiversity and ecological perspectives. However, plant physiology at those sites has been scarcely studied, likely due to logistic difficulties. In the present study, leaf physiological traits in native plants were analyzed from arid zones across an elevational transect in Western China, from Turpan Basin to the Qinghai-Tibet Plateau (QTP) at Delingha. The aim of this study was to use leaf physiological traits to help identifying potentially threatened species and true extremophiles. Physiological measurements in the field, and particularly in situ measurements of gas exchange and chlorophyll fluorescence, have been determined to be useful to determine the current state of plants at a given environment. Using this approach plus a combination of leaf traits, several species performing particularly well at the QTP were identified, e.g. Hedysarum multijugum, as well as at Manas drylands, e.g. Peganum harmala and Setaria viridis. On the other hand, several species showed marked signs of severe stress, in particular a very low photosynthetic rate over its potential maximum, as well as other negative traits, like low water and/or nitrogen-use-efficiency, which should be considered in conservation plans. Interestingly, all C₄ species studied except Setaria viridis were among the most stressed species. Despite their higher water use efficiency and drought-tolerance reputation, they presented a much larger photosynthesis depression than most C₃ species. This is an intriguing and interesting observation that deserves further studies.

Leaf traits mediate herbivory across a nitrogen gradient differently in extirpated vs. extant prairie species

Increasing nitrogen deposition threatens many grassland species with local extinction. In addition to the direct effects of nitrogen deposition, nitrogen can indirectly affect plant populations via phenotypic shifts in plant traits that influence plant susceptibility to herbivory. Here, I test how herbivory varies across an experimental nitrogen gradient and whether differences in susceptibility to herbivory might explain patterns of local species loss. Specifically, I examine how increasing nitrogen availability in a restored prairie influences leaf traits and subsequent herbivory (by leaf-chewers like insects/small mammals versus deer) and the severity of herbivore damage on confamiliar pairs of extirpated versus extant species from Michigan prairies. Nitrogen increased herbivory by both leaf-chewers and deer as well as herbivore damage (proportion of leaves damaged). Leaf hairiness and specific leaf area affected patterns of herbivory following nitrogen addition, although patterns varied between extirpated vs. extant taxa and herbivory type. Nitrogen increased leaf hairiness. At high levels of nitrogen addition, hairy extant plants experienced less herbivory and damage than smooth-leaved plants. In contrast, hairy extirpated plants were more likely to experience leaf-chewer herbivory. Extirpated plants with thin leaves (high specific leaf area) were less likely to experience leaf-chewer herbivory; the opposite was true for extant species. Generally, extant species experienced more herbivory than locally extirpated species, particularly at high levels of nitrogen addition, suggesting that increasing herbivory under nutrient addition likely does not influence extirpation in this system. This study suggests that trait-mediated responses to nitrogen addition and herbivory differ between extant and extirpated species.

Impact of microplastics on growth, photosynthesis and essential elements in Cucurbita pepo L

In this study, Cucurbita pepo L., one of the most cultivated, consumed and economically important crop worldwide, was used as model plant to test the toxic effects of the four most abundant microplastics identified in contaminated soils, i.e. polypropylene (PP), polyethylene (PE), polyvinylchloride (PVC), and polyethyleneterephthalate (PET). Cucurbita plants were grown in pots with increasing concentrations of the microplastics, then plant biometry, photosynthetic parameters and ionome of treated vs. untreated samples were compared to evaluate the toxicity of each plastic. All the pollutants impaired root and, especially, shoot growth. Specific and concentration-dependant effects of the different microplastics were found, including reduction in leaf size, chlorophyll content and photosynthetic efficiency, as well as changes in the micro- and macro-elemental profile. Among all the microplastics, PVC was identified as the most toxic and PE as the less toxic material. PVC decreased the dimensions of the leaf lamina, the values of the photosynthetic performance index and the plant iron concentration to a higher extent in respect to the other treatments. Microplastic toxicity exerted on the growth of C. pepo raises concerns about possible yield and economic loss, as well as for risks of a possible transfer into the food chain.

Seed bank bias: Differential tracking of functional traits in the seed bank and vegetation across a gradient

A goal in trait-based ecology is to understand and predict plant community responses to environmental change; however, diversity stored within seed banks that may expand or limit these responses is typically overlooked. If seed banks store attributes that are more advantageous or vulnerable under future conditions, they could impact community adaptability to change and disturbance. We explored compositional differences between seed banks and vegetation (i.e. seed bank bias) across a twelve-site gradient of increasingly higher and older soil terraces, asking: How do seed banks contribute to taxonomic and functional composition, and what do shifts in seed bank biases along the gradient (i.e. tracking) reveal about the processes driving seed bank variation and its implications for community adaptability? Across the gradient, seed banks stored distinct pools of species that added to species richness but not functional dispersion. Seed banks were generally biased towards short-life histories and 'fast' species with small seeds, thinner and more acquisitive roots, and lower root biomass allocation; however, trait means in the seed bank and vegetation sometimes shifted along the gradient, amplifying or reversing these biases. For example, species with higher specific leaf area (tied to rapid resource acquisition) tended to dominate vegetation on lower soil terraces but were more common in the seed bank on higher terraces - at least when patterns were weighted by species' relative abundances. Although seed banks were generally characterized by 'fast' attributes, observed shifts in seed bank biases across the gradient - particularly in leaf traits - demonstrate that environment can impact stored diversity, and consequently, our expectations for future vegetative turnover. The seed bank bias patterns that we characterized could be the result of many potential processes, including environment- or trait-driven variation in seed bank inputs (seed production, dispersal) or losses (seed desiccation, germination), and may have important implications for a system's adaptive capacity. Only by integrating seed banks into the functional ecology agenda will we be able to unpack these processes and use seed banks more effectively in both prediction and ecosystem management.

Degradation shifts plant communities from S- to R-strategy in an alpine meadow, Tibetan Plateau

The replacement of dominant sedges/grasses with secondary forbs is common in alpine rangelands, but the underlying plant ecological strategies and their relevance to leaf traits and their variabilities of different plant functional groups remain largely unknown. Here, we measured key leaf traits and analyzed the competitor, stress-tolerator and ruderal (CSR) strategies of major species with different functional groups (sedges, grasses and forbs) in an alpine meadow along a degradation gradient on the Tibetan Plateau. Our results indicated that S-selected species were dominant in both non-degraded (C:S:R = 1:95:4%) and severely degraded (C:S:R = 2:87:11%) meadows. However, there was a shift from S- to R-strategy in the communities after rangeland degradation. More specifically, sedges and grasses with a "conservative" strategy maintained stronger S-strategy to tolerate degraded and stressful conditions. In contrast, forbs with an "opportunistic" strategy (increase 9.5% in R-score) tended to adapt to degraded stages. Moreover, 51.1% and 23.9% of the increased R-scores in forbs were accounted by leaf mass per area and specific leaf area, respectively. Generally, higher leaf water and nitrogen contents coupled with larger variations in leaf traits and flexible SR strategies in forbs enabled them to capitalize on lower soil water and nutrient availability. Our findings highlighted that the contrasting strategies of plant species in response to the decrease in available resources might lead to niche expansion of secondary forbs and loss of diversity in the degraded alpine meadow. The emerging alternative stable states in the degraded rangelands might bring about a predicament for rangeland restoration.

Litter Quality Is a Stronger Driver than Temperature of Early Microbial Decomposition in Oligotrophic Streams: a Microcosm Study

Litter decomposition is an ecological process of key importance for forest headwater stream functioning, with repercussions for the global carbon cycle. The process is directly and indirectly mediated by microbial decomposers, mostly aquatic hyphomycetes, and influenced by environmental and biological factors such as water temperature and litter quality. These two factors are forecasted to change globally within the next few decades, in ways that may have contrasting effects on microbial-induced litter decomposition: while warming is expected to enhance microbial performance, the reduction in litter quality due to increased atmospheric carbon dioxide and community composition alteration may have the opposite outcome. We explored this issue through a microcosm experiment focused on early microbial-mediated litter decomposition under stream oligotrophic conditions, by simultaneously manipulating water temperature (10 °C and 15 °C) and litter quality (12 broadleaf plant species classified into 4 categories based on initial concentrations of nitrogen and tannins). We assessed potential changes in microbial-mediated litter decomposition and the performance of fungal decomposers (i.e., microbial respiration, biomass accrual, and sporulation rate) and species richness. We found stronger effects of litter quality, which enhanced the performance of microbial decomposers and decomposition rates, than temperature, which barely influenced any of the studied variables. Our results suggest that poorer litter quality associated with global change will have a major repercussion on stream ecosystem functioning.

Selective retention of particulate matter by nine plant species in central Shanxi Province, China

Plant leaves can accumulate particulate matter (PM) from the air, thus mitigating air pollution. Nine plant species from the central part of Shanxi Province, China, were investigated to characterize differences in their PM retention capacity and the grain sizes of the collected PM. Styphnolobium japonicum, Syringa oblata, and Cerasus serrulata demonstrated strong retention capacity for PM particles of diverse size fractions. Philadelphus incanus, Viburnum opulus, and Yulania biondii had relatively weak retention capacity for overall and fine PM. Generally, species with smaller leaves and roughness surfaces, waxy leaves, or leaves with hair had strong PM retention capacity. Leaves with suitable groove widths better retained fine PM. Foliar dust observed on leaves presented multimodal distribution curves, including bimodal, trimodal, and four-peak distributions, which differed from the trimodal distribution of natural dustfall. The different PM retention capacities of the nine investigated species and the differing grain sizes between foliar dust and atmospheric dustfall indicated that plant leaves could selectively retain PM. The results of this study provide a scientific basis for the use of the plant to mitigate particulate air pollution.

Differential springtime branch warming controls intra-crown nitrogen allocation and leaf photosynthetic traits in understory saplings of a temperate deciduous species

Between-branch nitrogen competition is expected to be important during spring in temperate deciduous trees as nitrogen allocation would be higher in branches from earlier budburst than in those from later budburst. Such phenology-induced branch interaction would influence plant photosynthesis, but this has not been evaluated. Warming experiments were conducted on whole crowns (warmed trees; trunks and all branches of the same tree were warmed) or parts of the crowns (warmed branches with unwarmed control branches in the same tree), with unwarmed control trees, in saplings of the deciduous species Fraxinus lanuginosa. Spring leaf phenology and leaf photosynthetic traits were investigated to determine how the difference in temperature affects leaf phenology and photosynthetic traits. The timing of budburst was influenced by temperature-budburst was earlier in warmed trees and warmed branches than in control trees and control branches, but budburst timing did not differ between control trees and control branches or between warmed trees and warmed branches. In contrast, leaf traits were affected by the variation in phenology within crowns-nitrogen content and photosynthetic capacity were greater in the leaves of the warmed branches than in the control branches, but they did not differ between the leaves of warmed trees and control trees. Thus, branch warming altered the distribution of nitrogen between warmed and unwarmed branches as warmed branches developed faster, resulting in intracrown variation in leaf photosynthetic traits.

Functional response of Betula species to edaphic and nutrient stress during restoration of fly ash deposits in the Middle Urals (Russia)

We studied the impact of fly ash produced by the thermal power station in the Middle Urals (Russia) on functional traits of two Betula species naturally colonizing ash dump lagoons. The main limiting factors for tree growth on fly ash deposits were nitrogen deficiency, high alkalinity, and unfavorable mechanical composition of substrate. Leaf area ratio (LAR) and leaf mass ratio (LMR) per tree, leaf area (LA), leaf shape coefficient (LSh), leaf thickness (LT), leaf mass per area (LMA), photosynthesis (A_max) and transpiration rates, chlorophyll (Chl), carotenoid (Car), and nitrogen (N) content were measured in Betula pendula Roth and Betula pubescens Ehrh. growing on the ash dump and in the forest near the dump. Both Betula species showed similar functional response to adverse conditions of the fly ash. We found a 1.5-2-fold increase in LAR and LMR in trees growing on fly ash deposits compared with trees in the forest. In both species, the most significant differences across leaf morphological traits were shown for LT. Higher LT provided an increase in Chl and N content per leaf area that caused the rise in A_max and photosynthetic water use efficiency in the trees on the ash deposit. At the same time, Betula species preserved interspecific differences in values of LA and LT which were larger in B. pubescens whiles B. pendula differed by higher LSh. We concluded that the increase in assimilation activity at both whole-plant and leaf levels provides plant adjustment to edaphic and nutrient stress that allow Betula species to colonize technogenic substrates as fly ash deposits.

Is salinity the main ecological factor that influences foliar nutrient resorption of desert plants in a hyper-arid environment?

BACKGROUND

Soil salinity is a major abiotic constraint to plant growth and development in the arid and semi-arid regions of the world. However, the influence of soil salinity on the process of nutrient resorption is not well known. We measured the pools of both mature and senesced leaf nitrogen (N), phosphorus (P), potassium (K), and sodium (Na) of desert plants from two types of habitats with contrasting degrees of soil salinity in a hyper-arid environment of northwest China.

RESULTS

N, P, K revealed strict resorption, whereas Na accumulated in senesced leaves. The resorption efficiencies of N, P, and K were positively correlated with each other but not with Na accumulation. The degree of leaf succulence drives both intra-and interspecific variation in leaf Na concentration rather than soil salinity. Both community- and species-level leaf nutrient resorption efficiencies (N, P, K) did not differ between the different habitats, suggesting that soil salinity played a weak role in influencing foliar nutrients resorption.

CONCLUSIONS

Our results suggest that plants in hyper-arid saline environments exhibit strict salt ion regulation strategies to cope with drought and ion toxicity and meanwhile ensure the process of nutrient resorption is not affected by salinity.

A dataset on above- and below-ground traits of 21 species found in banana cropping systems, cultivated individually

The data presented in this article describe 21 species that can be found in banana cropping systems: 17 cover crops species, 2 spontaneous species and 2 cultivars of banana. The cover crop species belongs mainly to Fabaceae family, but also to Poaceae, Euphorbiacea and Asteraceae. Four repetition of each species were cultivated individually, in the field, under non-limiting conditions. 40 variables were measured on whole plant, leaves and roots, at flowering or after six months of growth for longer cycle species. This dataset is made available to provide data on these species, enable comparisons between datasets and meta-analysis on cover crop or on species presented in arable fields. The data presented in this article were used in the research articles entitled “Trait-based characterisation of cover plants' light competition strategies for weed control in banana cropping systems in the French West Indies” (Tardy et al. 2015) and “Trait-based characterization of soil exploitation strategies of banana, weeds and cover plant species” (Tardy et al. 2017).

A dataset on service crop phenotypic characteristics related to their ability to deliver a set of ecological functions

The dataset presented in this article describe 33 species or varieties of service crops cultivated in population under non-limiting conditions. The description was made at flowering. 41 variables were measured on leaves, stems, roots and seeds. They related to plant phenology (1), morphology (13), physiology (1), biochemistry (18), size (6) and reproduction (2). This dataset is made available to enable comparisons between datasets, extended analysis and meta-analysis on cover crops. The data presented in this article were partly used in the research article entitled “A trait-based characterization of cover plants to assess their potential to provide a set of ecological services in banana cropping systems” (Damour et al., 2014).

Differences in leaf physiological and morphological traits between Camellia japonica and Camellia reticulata

Plants of the genus Camellia are widely cultivated throughout the world as ornamentals because of their bright and large flowers. The widely cultivated varieties are mainly derived from the mutant lines and hybrid progenies of Camellia japonica Linn. and Camellia reticulata Lindl. While their geographical distributions and environmental adaptabilities are significantly different, no systematic comparison has been conducted between these two species. To investigate differences in how these plants have adapted to their environments, we measured photosynthesis and 20 leaf functional traits of C. japonica and C. reticulata grown under the same conditions. Compared with C. japonica, C. reticulata showed higher values for light saturation point, light-saturated photosynthetic rate, leaf dry mass per unit area and stomatal area, but lower values for apparent quantum efficiency, leaf size, stomatal density and leaf nitrogen content per unit mass. Stomatal area was positively correlated with light-saturated photosynthetic rate and light saturation point, but negatively correlated with stomatal density. The differences between C. reticulata and C. japonica were mainly reflected in their adaptations to light intensity and leaf morphological traits. C. reticulata is better adapted to high light intensity than C. japonica. This difference is related to the two species' differing life forms. Thus, leaf morphological traits have played an important role in the light adaptation of C. reticulata and C. japonica, and might be first noticed and selected during the breeding process. These findings will contribute to the cultivation of camellia plants.

Dataset on early growth of cover crops in growth chamber

The data presented in this data paper describe the early growth of cover crop cultivated in growth chamber under non-limiting conditions. Seventeen species of four botanical groups were described after one month of growth. Traits related to plant growth and leaf area development were measured (five traits) and calculated (eight traits). This data set is made available to enable comparisons between dataset, extended analysis and meta-analysis on cover crop traits. The data presented in this article were used on the research article entitled “Leaf area development strategies of cover plants used in banana plantations identified from a set of plant traits’ [1].

Morphological variation of leaf traits in the Ternstroemia lineata species complex (Ericales: Penthaphylacaceae) in response to geographic and climatic variation

Variation in leaf morphology is correlated with environmental variables, such as precipitation, temperature and soil composition. Several studies have pointed out that individual plasticity can largely explain the foliar phenotypic differences observed in populations due to climatic change and have suggested that the environment plays an important role in the evolution of plant species by selecting for phenotypic variation. Thus, the study of foliar morphology in plant populations can help us identify the environmental factors that have potentially influenced the process of species diversification. In this study, we analyzed morphological variation in the leaf traits of the Ternstroemia lineata species complex (Penthaphylacaceae) and its relation to climatic variables across the species distribution area to identify the patterns of morphological differentiation within this species complex. Based on the collected leaves of 270 individuals from 32 populations, we analyzed nine foliar traits using spatial interpolation models and multivariate statistics. A principal component analysis identified three main morphological traits (leaf length and two leaf shape variables) that were used to generate interpolated surface maps to detect discrete areas delimited by zones of rapid change in the values of the morphological traits. We identified a mosaic coarse-grain pattern of geographical distribution in the variation of foliar traits. According to the interpolation maps, we could define nine morphological groups and their geographic distributions. Longer leaves, spatulate leaves and the largest foliar area were located in sites with lower precipitation and higher seasonality of precipitation following a northwest-southeast direction and following significant latitudinal and longitudinal gradients. According to the phenogram of the relationships of the nine morphological groups based on morphological similarity, the putative species and subspecies of the T. lineata species complex did not show a clear pattern of differentiation. In this study, we found a complex pattern of differentiation with some isolated populations and some other contiguous populations differentiated by different traits. Further genetic and systematic studies are needed to clarify the evolutionary relationships in this species complex.

Construction of a high-density genetic map and QTL mapping of leaf traits and plant growth in an interspecific F1 population of Catalpa bungei × Catalpa duclouxii Dode

BACKGROUND

Catalpa bungei is an important tree species used for timber in China and widely cultivated for economic and ornamental purposes. A high-density linkage map of C. bungei would be an efficient tool not only for identifying key quantitative trait loci (QTLs) that affect important traits, such as plant growth and leaf traits, but also for other genetic studies.

RESULTS

Restriction site-associated DNA sequencing (RAD-seq) was used to identify molecular markers and construct a genetic map. Approximately 280.77 Gb of clean data were obtained after sequencing, and in total, 25,614,295 single nucleotide polymorphisms (SNPs) and 2,871,647 insertions-deletions (InDels) were initially identified in the genomes of 200 individuals of a C. bungei (7080) × Catalpa duclouxii (16-PJ-3) F₁ population and their parents. Finally, 9072 SNP and 521 InDel markers that satisfied the requirements for constructing a genetic map were obtained. The integrated genetic map contained 9593 pleomorphic markers in 20 linkage groups and spanned 3151.63 cM, with an average distance between adjacent markers of 0.32 cM. Twenty QTLs for seven leaf traits and 13 QTLs for plant height at five successive time points were identified using our genetic map by inclusive composite interval mapping (ICIM). Q16-60 was identified as a QTL for five leaf traits, and three significant QTLs (Q9-1, Q18-66 and Q18-73) associated with plant growth were detected at least twice. Genome annotation suggested that a cyclin gene participates in leaf trait development, while the growth of C. bungei may be influenced by CDC48C and genes associated with phytohormone synthesis.

CONCLUSIONS

This is the first genetic map constructed in C. bungei and will be a useful tool for further genetic study, molecular marker-assisted breeding and genome assembly.

Visible and near-infrared hyperspectral indices explain more variation in lower-crown leaf nitrogen concentrations in autumn than in summer

Autumn canopy phenological transitions are increasing in length as a consequence of climate change. Here, we assess how well hyperspectral indices in the visible and near-infrared (NIR) wavelengths predict nitrogen (N) concentrations in lower-canopy leaves in the autumn phenological transition as they are generally understudied in leaf trait research. Using a Bayesian framework, we tested how well published indices are able to predict N concentrations in Fagus grandifolia Ehrh., Liriodendron tulipifera L., and Betula lenta L. from mid-summer through senescence, and how related the indices are to autumn phenological change. No indices were able to determine a trend in differences in N in mid-summer leaves. Indices that included wavelengths in the green and NIR ranges were the first indices able to detect a trend and had among the highest correlations with N concentration in both the last green collection and the senescing collection. Models were unique when indices were fit to data from different phenophases. Indices that focused on only the red edge (i.e., the sharp increase in reflectance between the red and NIR wavelengths) had the strongest explanatory power across the autumn phenological transition, but had less explanatory power for individual collections. These indices, as well as those that have been correlated with chlorophyll (CCI) and carotenoids (PRI), were the strongest descriptors of autumn progression. This study provides insights on challenges and capabilities to monitor a leaf's N concentration throughout and across canopy senescence.

The independent effects of nutrient enrichment and pulsed nutrient delivery on a common wetland invader and its native conspecific

Human activities often lead natural systems to be nutrient enriched, with anthropogenically derived nutrients commonly delivered in discrete pulses. Both nutrient enrichment and nutrient pulses can impact plant performance and phenotypic plasticity, especially in invasive species, but quantifying their independent effects remains challenging. To explore the effects of nutrient enrichment and nutrient pulse magnitude, we established a common garden experiment using the North American wetland invader Phragmites australis and its native conspecific Phragmites australis subsp. americanus (five source populations each). We exposed plants to three levels of nutrient enrichment that were delivered either in small or large-magnitude pulses, examining productivity and plasticity responses over a single growing season. Productivity and biomass allocation differed by lineage, with invasive Phragmites producing 73% more biomass and 66% more culms, but with the native growing 31% taller and allocating more of its biomass belowground. Contrary to expectations, both lineages responded similarly to nutrient enrichment and were similarly plastic in their traits. Nutrient enrichment, rather than nutrient pulses, led to large productivity gains and trait plasticity magnitudes. However, total biomass and leaf-level traits (specific leaf area and chlorophyll concentration) were responsive to variation in nutrient pulse magnitudes. By decoupling the effects of nutrient enrichment from nutrient pulses, our study demonstrates the independent effects of these two key factors for plant performance and, by extension, invasion success. We report trait-based similarities between two lineages of Phragmites that play contrasting ecological roles in North American wetlands, and we highlight the potentially detrimental effects of nutrient pulses.

Partitioning of mesophyll conductance for CO2 into intercellular and cellular components using carbon isotope composition of cuticles from opposite leaf sides

We suggest a new technique for estimating the relative drawdown of CO₂ concentration (c) in the intercellular air space (IAS) across hypostomatous leaves (expressed as the ratio c_d/c_b, where the indexes d and b denote the adaxial and abaxial edges, respectively, of IAS), based on the carbon isotope composition (δ¹³C) of leaf cuticular membranes (CMs), cuticular waxes (WXs) or epicuticular waxes (EWXs) isolated from opposite leaf sides. The relative drawdown in the intracellular liquid phase (i.e., the ratio c_c/c_bd, where c_c and c_bd stand for mean CO₂ concentrations in chloroplasts and in the IAS), the fraction of intercellular resistance in the total mesophyll resistance (r_IAS/r_m), leaf thickness, and leaf mass per area (LMA) were also assessed. We show in a conceptual model that the upper (adaxial) side of a hypostomatous leaf should be enriched in ¹³C compared to the lower (abaxial) side. CM, WX, and/or EWX isolated from 40 hypostomatous C₃ species were ¹³C depleted relative to bulk leaf tissue by 2.01-2.85‰. The difference in δ¹³C between the abaxial and adaxial leaf sides (δ¹³C_AB - ¹³C_AD, Δ_b-d), ranged from - 2.22 to + 0.71‰ (- 0.09 ± 0.54‰, mean ± SD) in CM and from - 7.95 to 0.89‰ (- 1.17 ± 1.40‰) in WX. In contrast, two tested amphistomatous species showed no significant Δ_b-d difference in WX. Δ_b-d correlated negatively with LMA and leaf thickness of hypostomatous leaves, which indicates that the mesophyll air space imposes a non-negligible resistance to CO₂ diffusion. δ¹³C of EWX and 30-C aldehyde in WX reveal a stronger CO₂ drawdown than bulk WX or CM. Mean values of c_d/c_b and c_c/c_bd were 0.90 ± 0.12 and 0.66 ± 0.11, respectively, across 14 investigated species in which wax was isolated and analyzed. The diffusion resistance of IAS contributed 20 ± 14% to total mesophyll resistance and reflects species-specific and environmentally-induced differences in leaf functional anatomy.

A high-density genetic map and QTL mapping of leaf traits and glucosinolates in Barbarea vulgaris

Background

Barbarea vulgaris is a wild cruciferous plant and include two distinct types: the G- and P-types named after their glabrous and pubescent leaves, respectively. The types differ significantly in resistance to a range of insects and diseases as well as glucosinolates and other chemical defenses. A high-density linkage map was needed for further progress to be made in the molecular research of this plant.

Results

We performed restriction site-associated DNA sequencing (RAD-Seq) on an F₂ population generated from G- and P-type B. vulgaris. A total of 1545 SNP markers were mapped and ordered in eight linkage groups, which represents the highest density linkage map to date for the crucifer tribe Cardamineae. A total of 722 previously published genome contigs (50.2 Mb, 30% of the total length) can be anchored to this high density genetic map, an improvement compared to a previously published map (431 anchored contigs, 38.7 Mb, 23% of the assembly genome). Most of these (572 contigs, 31.2 Mb) were newly anchored to the map, representing a significant improvement. On the basis of the present high-density genetic map, 37 QTL were detected for eleven traits, each QTL explaining 2.9–71.3% of the phenotype variation. QTL of glucosinolates, leaf size and color traits were in most cases overlapping, possibly implying a functional connection.

Conclusions

This high-density linkage map and the QTL obtained in this study will be useful for further understanding of the genetic of the B. vulgaris and molecular basis of these traits, many of which are shared in the related crop watercress.

Electronic supplementary material

The online version of this article (10.1186/s12864-019-5769-z) contains supplementary material, which is available to authorized users.

Quercus ilex L. leaves as filters of air Cd, Cr, Cu, Ni and Pb

The study of particulate matter pollution in urban areas is of great concern due its adverse effects on human health. Roadside vegetation, intercepting and filtering it, contributes to improve air quality. The aim of the research was to investigate the capability of Q. ilex leaves, already known good biomonitors of air quality, in filtering air metals. Besides, the main derivation (i.e. air or root uptake) of the investigated metals in leaf tissue was evaluated. The concentrations of Cd, Cr, Cu, Ni and Pb were measured in three groups of Q. ilex leaves (unwashed, water washed and chloroform washed). Besides, several leaf traits (i.e. length, width, petiole length, leaf area, leaf mass area and thickness) were evaluated. The findings highlighted that Cd, Cr, Cu, Ni and Pb in Q. ilex leaves exceeded the chemical fingerprint. In particular, Cd and Pb appeared the main contaminants of the investigated area as also after water washing of the leaves, their concentrations exceeded the chemical fingerprint. Ni, Cr and Pb appeared to be accumulated on leaf deposit; whereas, Cd appeared mainly adsorbed to leaf cuticle. Higher leaf width, lower leaf area and shorter petiole favoured leaf metal accumulation. Root uptake and translocation to leaves cannot be excluded for Cr and Ni; whereas, leaf Cu content would seem to depend on both leaf deposit and soil content. In conclusion, Q. ilex can be useful in filtering air metal pollution, especially for Ni, Cd, Cr and Pb, and improving air quality.

Temporal shifts in endophyte bacterial community composition of sessile oak (Quercus petraea) are linked to foliar nitrogen, stomatal length, and herbivory

We studied the relationship between plant functional foliar traits and the endophytic bacterial communities associated in trees, taking the example of sessile oak (Quercus petraea (Matt.) Liebl). Forty-five samples with replicates of eight leaves per sample were collected in spring, summer and autumn. Bacterial community diversity was analyzed via Automated Ribosomal Intergenic Spacer Analysis (ARISA). The leaf traits specific leaf area, level of herbivory, stomatal number, stomatal length, carbon and nitrogen concentration were measured for the leaves of each sample. For statistical analysis, linear mixed effect models, the Canonical Correlation Analysis (CCA) and Non-Parametric Multivariate Analysis of Variance (NPMANOVA) were applied. Herbivory, nitrogen and carbon concentration were significantly different in autumn compared to spring and summer (p value < 0.05), while stomatal length was differentiated between spring and the other two seasons (p value < 0.01). The seasonal differentiation of the bacterial community structure was explained by the first and second axes (29.7% and 25.3%, respectively) in the CCA. The bacterial community structure significantly correlated with herbivory, nitrogen concentration and stomatal length. We conclude that herbivory, nitrogen content, and size of stomatal aperture at the leaf level are important for endophyte colonization in oaks growth in alpine forest environments.

Phosphorus allocation and phosphatase activity in grasses with different growth rates

Different growth rates of grasses from South American natural grasslands are adaptations to soils of low fertility. Grasses with fast growth rate are species with an accumulation of nutrients in soluble forms, with a high metabolic rate. This work aimed to study whether grasses with different growth rates have different phosphorus (P) uptake and efficiency of P use with high and low P availability in soil, as well as whether phosphatase activity is related to the species growth rate and variations in P biochemical forms in the tissues. Three native grasses (Axonopus affinis, Paspalum notatum, and Andropogon lateralis) were grown in pots with soil. Along plant growth, biomass production and its structural components were measured, as well as leaf acid phosphatase activity and leaf P chemical fractions. At 40 days of growth, leaf acid phosphatase activity declined by about 20-30% with an increase of P availability in soil for A. affinis and P. notatum, respectively. Under both soil P levels, P. notatum showed the highest plant total biomass, leaf dry weight and highest P use efficiency. A. affinis presented the higher P uptake efficiency and soluble organic P concentration in the leaf tissues. A. lateralis showed P-Lipid concentration 1.6 and 1.3 times higher than A. affinis and P. notatum, respectively. In conclusion, acid phosphatase activity in grass of higher growth rate is related to higher remobilization of P due to higher demand, as in A. affinis, and higher growth rates are associated with higher P uptake efficiency.

Pectin and cellulose cell wall composition enables different strategies to leaf water uptake in plants from tropical fog mountain

Leaf water uptake (LWU) has been observed in plants of different ecosystems and this process is distinct among different species. Four plant species from the Brazilian fog mountain fields were evaluated in order to detect if leaf water uptake capacity is related to the cell wall composition of leaf epidermis. LWU measurements and their relation to anatomical and biochemical traits were analyzed. Cell wall composition was verified through immunocytochemistry using monoclonal antibodies recognizing pectin compounds, and histochemistry with calcofluor white to track cellulose. Differences in LWU among the four species were clearly revealed. Two species presented higher maximum leaf water content and the lowest values of water absorption speed. The other two species presented opposite behavior, namely, low leaf water uptake and the highest values of water absorption speed. The anatomical traits associated with the cell wall composition corroborated the data on the different LWU strategies. The species with abundant detection of cellulose in their epidermal cell walls absorbed more water, but more slowly, while those with abundant detection of pectins absorbed water at a higher speed. These results indicate that cell wall composition regarding pectin and cellulose are significant for water uptake by the leaf epidermis. Pectin provides greater porosity and absorption speed, while cellulose provides greater hydrophilicity and greater water uptake capacity. Current data indicate that the composition of epidermal cell walls is a relevant trait for leaf water uptake.

Does enemy damage vary across the range of exotic plant species? Evidence from two coastal dune plant species in eastern Australia

Release from natural enemies is often cited as a key factor for understanding the success of invasive plant species in novel environments. However, with time invasive species will accumulate native enemies in their invaded range, with factors such as spread distance from the site of introduction, climate and leaf-level traits potentially affecting enemy acquisition rates. However, the influence of such factors is difficult to assess without examining enemy attack across the entire species' range. We tested the significance of factors associated with range expansion (distance from source population and maximum population density), climatic variables (annual temperature and rainfall) and leaf-level traits [specific leaf area (SLA) and foliar nitrogen concentration] in explaining variation in enemy damage across multiple populations of two coastal invasive plants (Gladiolus gueinzii Kunze and Hydrocotyle bonariensis Lam.) along their entire introduced distribution in eastern Australia. We found that for H. bonariensis, amount of foliar damage increased with distance from source population. In contrast, for G. gueinzii, probability and amount of foliar damage decreased with decreasing temperature and increasing rainfall, respectively. Our results show that patterns of enemy attack across species' ranges are complex and cannot be generalised between species or even range edges.

Stomatal CO2 responsiveness and photosynthetic capacity of tropical woody species in relation to taxonomy and functional traits

Stomatal CO2 responsiveness and photosynthetic capacity vary greatly among plant species, but the factors controlling these physiological leaf traits are often poorly understood. To explore if these traits are linked to taxonomic group identity and/or to other plant functional traits, we investigated the short-term stomatal CO2 responses and the maximum rates of photosynthetic carboxylation (V cmax) and electron transport (J max) in an evolutionary broad range of tropical woody plant species. The study included 21 species representing four major seed plant taxa: gymnosperms, monocots, rosids and asterids. We found that stomatal closure responses to increased CO2 were stronger in angiosperms than in gymnosperms, and in monocots compared to dicots. Stomatal CO2 responsiveness was not significantly related to any of the other functional traits investigated, while a parameter describing the relationship between photosynthesis and stomatal conductance in combined leaf gas exchange models (g 1) was related to leaf area-specific plant hydraulic conductance. For photosynthesis, we found that the interspecific variation in V cmax and J max was related to within leaf nitrogen (N) allocation rather than to area-based total leaf N content. Within-leaf N allocation and water use were strongly co-ordinated (r 2 = 0.67), such that species with high fractional N investments into compounds maximizing photosynthetic capacity also had high stomatal conductance. We conclude that while stomatal CO2 responsiveness of tropical woody species seems poorly related to other plant functional traits, photosynthetic capacity is linked to fractional within-leaf N allocation rather than total leaf N content and is closely co-ordinated with leaf water use.

Spatial heterogeneity of soil biochar content affects soil quality and wheat growth and yield

Biochar (BC) is a carbonaceous material obtained by pyrolysis of organic waste materials and has been proposed as a soil management strategy to mitigate global warming and to improve crop productivity. Once BC has been applied to the soil, its imperfect and incomplete mixing with soil during the first few years and the standard agronomic practices (i.e. tillage, sowing) may generate spatial heterogeneity of the BC content in the soil, which may have implications for soil properties and their effects on plant growth. We investigated how, after two agronomic seasons, the spatial heterogeneity of olive-tree prunings BC applied to a vertisol affected soil characteristics and wheat growth and yield. During the second agronomic season and just before wheat germination, we determined the BC content in the soil by an in-situ visual categorization based on the soil darkening, which was strongly correlated to the BC content of the soil and the soil brightness. We found a high spatial heterogeneity in the BC plots, which affected soil characteristics and wheat growth and yield. Patches with high BC content showed reduced soil compaction and increased soil moisture, pH, electrical conductivity, and nutrient availability (P, Ca, K, Mn, Fe, and Zn); consequently, wheat had greater tillering and higher relative growth rate and grain yield. However, if the spatial heterogeneity of the soil BC content had not been taken into account in the data analysis, most of the effects of BC on wheat growth would not have been detected. Our study reveals the importance of taking into account the spatial heterogeneity of the BC content.