1
|
Zhang W, Planas-Marquès M, Mazier M, Šimkovicová M, Rocafort M, Mantz M, Huesgen PF, Takken FLW, Stintzi A, Schaller A, Coll NS, Valls M. The tomato P69 subtilase family is involved in resistance to bacterial wilt. Plant J 2024; 118:388-404. [PMID: 38150324 DOI: 10.1111/tpj.16613] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/01/2023] [Revised: 12/13/2023] [Accepted: 12/15/2023] [Indexed: 12/29/2023]
Abstract
The intercellular space or apoplast constitutes the main interface in plant-pathogen interactions. Apoplastic subtilisin-like proteases-subtilases-may play an important role in defence and they have been identified as targets of pathogen-secreted effector proteins. Here, we characterise the role of the Solanaceae-specific P69 subtilase family in the interaction between tomato and the vascular bacterial wilt pathogen Ralstonia solanacearum. R. solanacearum infection post-translationally activated several tomato P69s. Among them, P69D was exclusively activated in tomato plants resistant to R. solanacearum. In vitro experiments showed that P69D activation by prodomain removal occurred in an autocatalytic and intramolecular reaction that does not rely on the residue upstream of the processing site. Importantly P69D-deficient tomato plants were more susceptible to bacterial wilt and transient expression of P69B, D and G in Nicotiana benthamiana limited proliferation of R. solanacearum. Our study demonstrates that P69s have conserved features but diverse functions in tomato and that P69D is involved in resistance to R. solanacearum but not to other vascular pathogens like Fusarium oxysporum.
Collapse
Affiliation(s)
- Weiqi Zhang
- Centre for Research in Agricultural Genomics (CRAG), CSIC-IRTA-UAB-UB, Campus UAB, Bellaterra, Spain
| | - Marc Planas-Marquès
- Centre for Research in Agricultural Genomics (CRAG), CSIC-IRTA-UAB-UB, Campus UAB, Bellaterra, Spain
- Department of Genetics, Microbiology and Statistics, Universitat de Barcelona, Barcelona, Catalonia, Spain
| | | | - Margarita Šimkovicová
- Molecular Plant Pathology, Faculty of Science, Swammerdam Institute for Life Sciences, University of Amsterdam, Amsterdam, The Netherlands
| | - Mercedes Rocafort
- Centre for Research in Agricultural Genomics (CRAG), CSIC-IRTA-UAB-UB, Campus UAB, Bellaterra, Spain
| | - Melissa Mantz
- Central Institute for Engineering, Electronics and Analytics, ZEA-3, Forschungszentrum Jülich, Jülich, Germany
- CECAD, Medical Faculty and University Hospital, University of Cologne, Cologne, Germany
| | - Pitter F Huesgen
- Central Institute for Engineering, Electronics and Analytics, ZEA-3, Forschungszentrum Jülich, Jülich, Germany
- CECAD, Medical Faculty and University Hospital, University of Cologne, Cologne, Germany
- Faculty of Mathematics and Natural Sciences, Institute for Biochemistry, University of Cologne, Cologne, Germany
| | - Frank L W Takken
- Molecular Plant Pathology, Faculty of Science, Swammerdam Institute for Life Sciences, University of Amsterdam, Amsterdam, The Netherlands
| | - Annick Stintzi
- Department of Plant Physiology and Biochemistry, University of Hohenheim, Stuttgart, Germany
| | - Andreas Schaller
- Department of Plant Physiology and Biochemistry, University of Hohenheim, Stuttgart, Germany
| | - Nuria S Coll
- Centre for Research in Agricultural Genomics (CRAG), CSIC-IRTA-UAB-UB, Campus UAB, Bellaterra, Spain
- Consejo Superior de Investigaciones Científicas (CSIC), Barcelona, Spain
| | - Marc Valls
- Centre for Research in Agricultural Genomics (CRAG), CSIC-IRTA-UAB-UB, Campus UAB, Bellaterra, Spain
- Department of Genetics, Microbiology and Statistics, Universitat de Barcelona, Barcelona, Catalonia, Spain
| |
Collapse
|
2
|
Elsäßer G, Seidl T, Pfannstiel J, Schaller A, Stührwohldt N. Characterization of Prolyl-4-Hydroxylase Substrate Specificity Using Pichia pastoris as an Efficient Eukaryotic Expression System. Methods Mol Biol 2024; 2731:59-80. [PMID: 38019426 DOI: 10.1007/978-1-0716-3511-7_5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2023]
Abstract
The use of eukaryotic expression systems facilitates the heterologous expression of complex eukaryotic proteins in their post-translationally modified and biologically active state, as a prerequisite for subsequent biochemical characterization and functional analysis. Here we describe the complete workflow for the expression of Arabidopsis thaliana prolyl-4-hydroxylases (P4Hs) in the methylotrophic yeast Pichia pastoris (renamed as Komagataella phaffii), for the extraction of the recombinant enzymes, purification by affinity chromatography, and characterization of P4H activity and specificity toward oligopeptide substrates by mass spectrometry. We expressed eight of the 13 Arabidopsis P4Hs and show that they are all active against proline-rich extensin-derived peptides. However, three of them differed in substrate specificity and were also able to hydroxylate the CLEL9 signaling peptide, featuring a single proline within its mature peptide sequence.
Collapse
Affiliation(s)
- Gerith Elsäßer
- Department of Plant Physiology and Biochemistry, Institute of Biology, University of Hohenheim, Stuttgart, Germany
| | - Tim Seidl
- Department of Plant Physiology and Biochemistry, Institute of Biology, University of Hohenheim, Stuttgart, Germany
| | - Jens Pfannstiel
- Core Facility Hohenheim, Mass Spectrometry Module, University of Hohenheim, Stuttgart, Germany
| | - Andreas Schaller
- Department of Plant Physiology and Biochemistry, Institute of Biology, University of Hohenheim, Stuttgart, Germany
| | - Nils Stührwohldt
- Department of Plant Physiology and Biochemistry, Institute of Biology, University of Hohenheim, Stuttgart, Germany.
| |
Collapse
|
3
|
Bühler E, Schaller A, Stührwohldt N. A Quick Method to Analyze Peptide-Regulated Anthocyanin Biosynthesis. Methods Mol Biol 2024; 2731:143-155. [PMID: 38019432 DOI: 10.1007/978-1-0716-3511-7_11] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2023]
Abstract
Post-translationally modified peptides are now recognized as important regulators of plant stress responses. We recently identified the sulfated CLE-LIKE6 (CLEL6) peptide as a negative regulator of anthocyanin biosynthesis in dark-grown and in light-stressed Arabidopsis seedlings. The function of CLEL6 depends on proteolytic processing by subtilisin-like serine proteinase SBT6.1, and on tyrosine sulfation by tyrosylprotein sulfotransferase (TPST), and CLEL6 signaling relies on the ROOT MERISTEM GROWTH FACTOR 1 INSENSITIVE (RGI) receptor family. In this chapter, we describe in detail how to quantify peptide-regulated and stress-induced anthocyanin biosynthesis. We include protocols for peptide treatment of Arabidopsis seedlings and growth under different stress conditions, for the extraction and quantification of anthocyanins, and for the expression analysis of anthocyanin biosynthetic genes.
Collapse
Affiliation(s)
- Eric Bühler
- Department of Plant Physiology and Biochemistry, Institute of Biology, University of Hohenheim, Stuttgart, Germany
| | - Andreas Schaller
- Department of Plant Physiology and Biochemistry, Institute of Biology, University of Hohenheim, Stuttgart, Germany
| | - Nils Stührwohldt
- Department of Plant Physiology and Biochemistry, Institute of Biology, University of Hohenheim, Stuttgart, Germany.
| |
Collapse
|
4
|
Wang X, Li R, Stintzi A, Schaller A. Automated Real-Time Monitoring of Extracellular pH to Assess Early Plant Defense Signaling. Methods Mol Biol 2024; 2731:169-178. [PMID: 38019434 DOI: 10.1007/978-1-0716-3511-7_13] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2023]
Abstract
Extracellular alkalinization mediated by the inhibition of plasma membrane-located proton pumping ATPases hallmarks the initiation of defense signaling in plant cells. Early defense responses also include depolarization of the plasma membrane, increase in cytosolic Ca2+ concentration, and an oxidative burst. Together these early signaling events lead to the activation of plant immunity. The transient alkalinization response is triggered by well-studied pathogen-derived and plant endogenous elicitors, including, for example, bacterial flagellin, fungal chitin, and tomato systemin in both model and agronomic species. Employing cell suspension cultures, extracellular alkalinization can be easily assessed by measuring the elicitor-induced pH changes of the cultivating medium. Here, we provide a protocol for an improved alkalinization assay in a system which is able to simultaneously monitor multiple samples, and fully automatically transfer customizable real-time pH records. In this system flagellin, chitin and systemin elicit robust time- and dose-dependent responses, proving a powerful tool for assessing plant early defense signaling.
Collapse
Affiliation(s)
- Xu Wang
- Department of Plant Physiology and Biochemistry, University of Hohenheim, Stuttgart, Germany
| | - Rong Li
- Department of Plant Physiology and Biochemistry, University of Hohenheim, Stuttgart, Germany
| | - Annick Stintzi
- Department of Plant Physiology and Biochemistry, University of Hohenheim, Stuttgart, Germany
| | - Andreas Schaller
- Department of Plant Physiology and Biochemistry, University of Hohenheim, Stuttgart, Germany.
| |
Collapse
|
5
|
Li R, Schaller A, Stintzi A. Quantitative Measurement of Pattern-Triggered ROS Burst as an Early Immune Response in Tomato. Methods Mol Biol 2024; 2731:157-167. [PMID: 38019433 DOI: 10.1007/978-1-0716-3511-7_12] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2023]
Abstract
The rapid accumulation of extracellular "reactive oxygen species" (ROS), also known as the "oxidative burst", is an early plant immune response triggered by pathogen-derived microbe-associated molecular patterns and by endogenous plant signaling molecules. The oxidative burst is often used as a readout for the activation of defense signaling. Here, we present a detailed protocol for the continuous measurement of ROS production in leaf discs of tomato plants, using a chemiluminescence-based assay in a microtiter plate format. We also include recommendations for data analysis and for the quantitative assessment of differences in ROS burst dynamics, as caused by different types of elicitors, or in different tomato genotypes.
Collapse
Affiliation(s)
- Rong Li
- Department of Plant Physiology and Biochemistry, University of Hohenheim, Stuttgart, Germany
| | - Andreas Schaller
- Department of Plant Physiology and Biochemistry, University of Hohenheim, Stuttgart, Germany
| | - Annick Stintzi
- Department of Plant Physiology and Biochemistry, University of Hohenheim, Stuttgart, Germany.
| |
Collapse
|
6
|
Yang H, Kim X, Skłenar J, Aubourg S, Sancho-Andrés G, Stahl E, Guillou MC, Gigli-Bisceglia N, Tran Van Canh L, Bender KW, Stintzi A, Reymond P, Sánchez-Rodríguez C, Testerink C, Renou JP, Menke FLH, Schaller A, Rhodes J, Zipfel C. Subtilase-mediated biogenesis of the expanded family of SERINE RICH ENDOGENOUS PEPTIDES. Nat Plants 2023; 9:2085-2094. [PMID: 38049516 DOI: 10.1038/s41477-023-01583-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/10/2022] [Accepted: 11/03/2023] [Indexed: 12/06/2023]
Abstract
Plant signalling peptides are typically released from larger precursors by proteolytic cleavage to regulate plant growth, development and stress responses. Recent studies reported the characterization of a divergent family of Brassicaceae-specific peptides, SERINE RICH ENDOGENOUS PEPTIDES (SCOOPs), and their perception by the leucine-rich repeat receptor kinase MALE DISCOVERER 1-INTERACTING RECEPTOR-LIKE KINASE 2 (MIK2). Here, we reveal that the SCOOP family is highly expanded, containing at least 50 members in the Columbia-0 reference Arabidopsis thaliana genome. Notably, perception of these peptides is strictly MIK2-dependent. How bioactive SCOOP peptides are produced, and to what extent their perception is responsible for the multiple physiological roles associated with MIK2 are currently unclear. Using N-terminomics, we validate the N-terminal cleavage site of representative PROSCOOPs. The cleavage sites are determined by conserved motifs upstream of the minimal SCOOP bioactive epitope. We identified subtilases necessary and sufficient to process PROSCOOP peptides at conserved cleavage motifs. Mutation of these subtilases, or their recognition motifs, suppressed PROSCOOP cleavage and associated overexpression phenotypes. Furthermore, we show that higher-order mutants of these subtilases show phenotypes reminiscent of mik2 null mutant plants, consistent with impaired PROSCOOP biogenesis, and demonstrating biological relevance of SCOOP perception by MIK2. Together, this work provides insights into the molecular mechanisms underlying the functions of the recently identified SCOOP peptides and their receptor MIK2.
Collapse
Affiliation(s)
- Huanjie Yang
- Institute of Plant and Microbial Biology, Zurich-Basel Plant Science Center, University of Zurich, Zurich, Switzerland
- Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China
| | - Xeniya Kim
- Institute of Plant and Microbial Biology, Zurich-Basel Plant Science Center, University of Zurich, Zurich, Switzerland
| | - Jan Skłenar
- The Sainsbury Laboratory, University of East Anglia, Norwich Research Park, Norwich, UK
| | - Sébastien Aubourg
- Université Angers, Institut Agro, INRAE, IRHS, SFR QUASAV, Angers, France
| | | | - Elia Stahl
- Department of Plant Molecular Biology, University of Lausanne, Lausanne, Switzerland
| | | | - Nora Gigli-Bisceglia
- Laboratory of Plant Physiology, Wageningen University and Research, Wageningen, the Netherlands
- Plant Stress Resilience, Institute of Environmental Biology, Utrecht University, Utrecht, the Netherlands
| | - Loup Tran Van Canh
- Université Angers, Institut Agro, INRAE, IRHS, SFR QUASAV, Angers, France
| | - Kyle W Bender
- Institute of Plant and Microbial Biology, Zurich-Basel Plant Science Center, University of Zurich, Zurich, Switzerland
| | - Annick Stintzi
- Institute of Biology, Plant Physiology and Biochemistry, University of Hohenheim, Stuttgart, Germany
| | - Philippe Reymond
- Department of Plant Molecular Biology, University of Lausanne, Lausanne, Switzerland
| | | | - Christa Testerink
- Laboratory of Plant Physiology, Wageningen University and Research, Wageningen, the Netherlands
| | - Jean-Pierre Renou
- Université Angers, Institut Agro, INRAE, IRHS, SFR QUASAV, Angers, France
| | - Frank L H Menke
- The Sainsbury Laboratory, University of East Anglia, Norwich Research Park, Norwich, UK
| | - Andreas Schaller
- Institute of Biology, Plant Physiology and Biochemistry, University of Hohenheim, Stuttgart, Germany
| | - Jack Rhodes
- The Sainsbury Laboratory, University of East Anglia, Norwich Research Park, Norwich, UK.
| | - Cyril Zipfel
- Institute of Plant and Microbial Biology, Zurich-Basel Plant Science Center, University of Zurich, Zurich, Switzerland.
- The Sainsbury Laboratory, University of East Anglia, Norwich Research Park, Norwich, UK.
| |
Collapse
|
7
|
Bühler E, Fahrbach E, Schaller A, Stührwohldt N. Sulfopeptide CLEL6 inhibits anthocyanin biosynthesis in Arabidopsis thaliana. Plant Physiol 2023; 193:809-820. [PMID: 37254811 DOI: 10.1093/plphys/kiad316] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/20/2023] [Revised: 04/21/2023] [Accepted: 04/24/2023] [Indexed: 06/01/2023]
Abstract
Posttranslationally modified peptides are now recognized as important regulators of plant stress responses. Here, we identified the small sulfated CLE-LIKE6 (CLEL6) peptide as a negative regulator of anthocyanin biosynthesis in etiolated and in light-stressed Arabidopsis (Arabidopsis thaliana) seedlings. CLEL6 function depends on proteolytic processing of the CLEL6 precursor by subtilisin-like serine proteinase 6.1 (SBT6.1) and on tyrosine sulfation by tyrosylprotein sulfotransferase (TPST). Loss-of-function mutants of either sbt6.1 or tpst showed significantly higher anthocyanin accumulation than the wild type upon light stress. The anthocyanin overaccumulation phenotype of sbt6.1 and tpst was suppressed by application of mature CLEL6. Overexpression and external application of CLEL6 inhibited the expression of anthocyanin biosynthesis genes in etiolated and light-stressed seedlings, confirming the role of CLEL6 as an inhibitor of anthocyanin biosynthesis. Small posttranslationally modified peptides are perceived by leucine-rich repeat receptor-like kinases. Using a quintuple mutant of ROOT MERISTEM GROWTH FACTOR 1 INSENSITIVE (RGI) receptors, we showed the essential function of the RGI receptor family in CLEL6 signaling. Our data indicate that overexpression or application of CLEL6 inhibits anthocyanin biosynthesis through RGI receptors. We propose that CLEL6 inhibits anthocyanin biosynthesis in etiolated seedlings, and that anthocyanin biosynthesis is derepressed when CLEL6 expression is downregulated upon light exposure. Hyperaccumulation of anthocyanins in light-stressed tpst and sbt6.1 mutant seedlings suggests that CLEL6, or related sulfopeptides, continues to act as negative regulators to limit pigment accumulation in the light.
Collapse
Affiliation(s)
- Eric Bühler
- Department of Plant Physiology and Biochemistry, Institute of Biology, University of Hohenheim, Stuttgart 70593, Germany
| | - Elisa Fahrbach
- Department of Plant Physiology and Biochemistry, Institute of Biology, University of Hohenheim, Stuttgart 70593, Germany
| | - Andreas Schaller
- Department of Plant Physiology and Biochemistry, Institute of Biology, University of Hohenheim, Stuttgart 70593, Germany
| | | |
Collapse
|
8
|
Wang N, Wang Z, Tzourtzou S, Wang X, Bi X, Leimeister J, Xu L, Sakamoto T, Matsunaga S, Schaller A, Jiang H, Liu C. The plant nuclear lamina disassembles to regulate genome folding in stress conditions. Nat Plants 2023:10.1038/s41477-023-01457-2. [PMID: 37400513 PMCID: PMC10356608 DOI: 10.1038/s41477-023-01457-2] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/10/2023] [Accepted: 06/07/2023] [Indexed: 07/05/2023]
Abstract
The nuclear lamina is a complex network of nuclear lamins and lamin-associated nuclear membrane proteins, which scaffold the nucleus to maintain structural integrity. In Arabidopsis thaliana, nuclear matrix constituent proteins (NMCPs) are essential components of the nuclear lamina and are required to maintain the structural integrity of the nucleus and specific perinuclear chromatin anchoring. At the nuclear periphery, suppressed chromatin overlapping with repetitive sequences and inactive protein-coding genes are enriched. At a chromosomal level, plant chromatin organization in interphase nuclei is flexible and responds to various developmental cues and environmental stimuli. On the basis of these observations in Arabidopsis, and given the role of NMCP genes (CRWN1 and CRWN4) in organizing chromatin positioning at the nuclear periphery, one can expect considerable changes in chromatin-nuclear lamina interactions when the global chromatin organization patterns are being altered in plants. Here we report the highly flexible nature of the plant nuclear lamina, which disassembles substantially under various stress conditions. Focusing on heat stress, we reveal that chromatin domains, initially tethered to the nuclear envelope, remain largely associated with CRWN1 and become scattered in the inner nuclear space. By investigating the three-dimensional chromatin contact network, we further reveal that CRWN1 proteins play a structural role in shaping the changes in genome folding under heat stress. Also, CRWN1 acts as a negative transcriptional coregulator to modulate the shift of the plant transcriptome profile in response to heat stress.
Collapse
Affiliation(s)
- Nan Wang
- Department of Epigenetics, Institute of Biology, University of Hohenheim, Stuttgart, Germany
| | - Zhidan Wang
- Department of Epigenetics, Institute of Biology, University of Hohenheim, Stuttgart, Germany
| | - Sofia Tzourtzou
- Department of Epigenetics, Institute of Biology, University of Hohenheim, Stuttgart, Germany
| | - Xu Wang
- Department of Plant Physiology and Biochemistry, Institute of Biology, University of Hohenheim, Stuttgart, Germany
| | - Xiuli Bi
- Center for Plant Molecular Biology (ZMBP), University of Tübingen, Tübingen, Germany
- Shandong Provincial Hospital, Shandong First Medical University, Jinan, China
| | - Julia Leimeister
- Center for Plant Molecular Biology (ZMBP), University of Tübingen, Tübingen, Germany
| | - Linhao Xu
- Applied Chromosome Biology, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK), Gatersleben, Germany
| | - Takuya Sakamoto
- Department of Applied Biological Science, Faculty of Science and Technology, Tokyo University of Science, Noda, Japan
| | - Sachihiro Matsunaga
- Department of Integrated Biosciences, Graduate School of Frontier Sciences, The University of Tokyo, Kashiwa, Japan
| | - Andreas Schaller
- Department of Plant Physiology and Biochemistry, Institute of Biology, University of Hohenheim, Stuttgart, Germany
| | - Hua Jiang
- Applied Chromosome Biology, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK), Gatersleben, Germany
| | - Chang Liu
- Department of Epigenetics, Institute of Biology, University of Hohenheim, Stuttgart, Germany.
| |
Collapse
|
9
|
Reichardt S, Stintzi A, Schaller A. Assay for Phytaspase-mediated Peptide Precursor Cleavage Using Synthetic Oligopeptide Substrates. Bio Protoc 2023; 13:e4608. [PMID: 36816990 PMCID: PMC9909310 DOI: 10.21769/bioprotoc.4608] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/28/2022] [Revised: 11/22/2022] [Accepted: 01/12/2023] [Indexed: 02/04/2023] Open
Abstract
Proteases control plant growth and development by limited proteolysis of regulatory proteins at highly specific sites. This includes the processing of peptide hormone precursors to release the bioactive peptides as signaling molecules. The proteases involved in this process have long remained elusive. Confirmation of a candidate protease as a peptide precursor-processing enzyme requires the demonstration of protease-mediated precursor cleavage in vitro. In vitro cleavage assays rely on the availability of suitable substrates and the candidate protease with high purity. Here, we provide a protocol for the expression, purification, and characterization of tomato (Solanum lycopersicum) phytaspases as candidate proteases for the processing of the phytosulfokine precursor. We also show how synthetic oligopeptide substrates can be used to demonstrate site-specific precursor cleavage. Graphical abstract.
Collapse
Affiliation(s)
- Sven Reichardt
- Dept. Plant Physiology and Biochemistry, University of Hohenheim, 70593 Stuttgart, Germany
| | - Annick Stintzi
- Dept. Plant Physiology and Biochemistry, University of Hohenheim, 70593 Stuttgart, Germany
| | - Andreas Schaller
- Dept. Plant Physiology and Biochemistry, University of Hohenheim, 70593 Stuttgart, Germany
| |
Collapse
|
10
|
Brück S, Pfannstiel J, Ingram G, Stintzi A, Schaller A. Analysis of Peptide Hormone Maturation and Processing Specificity Using Isotope-Labeled Peptides. Methods Mol Biol 2023; 2581:323-335. [PMID: 36413328 DOI: 10.1007/978-1-0716-2784-6_23] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/16/2023]
Abstract
Many peptide hormones and growth factors in plants, particularly the small posttranslationally modified signaling peptides, are synthesized as larger precursor proteins. Proteolytic processing is thus required for peptide maturation, and additional posttranslational modifications may contribute to bioactivity. To what extent these posttranslational modifications impact on processing is largely unknown. Likewise, it is poorly understood how the cleavage sites within peptide precursors are selected by specific processing proteases, and whether or not posttranslational modifications contribute to cleavage site recognition. Here, we describe a mass spectrometry-based approach to address these questions. We developed a method using heavy isotope labeling to directly compare cleavage efficiency of different precursor-derived synthetic peptides by mass spectrometry. Thereby, we can analyze the effect of posttranslational modifications on processing and the specific sequence requirements of the processing proteases. As an example, we describe how this method has been used to assess the relevance of tyrosine sulfation for the processing of the Arabidopsis CIF4 precursor by the subtilase SBT5.4.
Collapse
Affiliation(s)
- Stefanie Brück
- Department of Plant Physiology and Biochemistry, University of Hohenheim, Stuttgart, Germany
| | - Jens Pfannstiel
- Core Facility Hohenheim, Mass Spectrometry Unit, University of Hohenheim, Stuttgart, Germany
| | - Gwyneth Ingram
- Laboratoire Reproduction et Développement des Plantes, Univ Lyon, ENS de Lyon, UCB Lyon 1, CNRS, INRAE, Lyon, France
| | - Annick Stintzi
- Department of Plant Physiology and Biochemistry, University of Hohenheim, Stuttgart, Germany
| | - Andreas Schaller
- Department of Plant Physiology and Biochemistry, University of Hohenheim, Stuttgart, Germany.
| |
Collapse
|
11
|
Royek S, Brück S, Pfannstiel J, Stintzi A, Schaller A. Improved Identification of Protease Cleavage Sites by In-gel Reductive Dimethylation. Methods Mol Biol 2023; 2581:337-349. [PMID: 36413329 DOI: 10.1007/978-1-0716-2784-6_24] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/16/2023]
Abstract
A critical step in the functional characterization of proteases is the identification of physiologically relevant substrates, which often starts with a collection of candidate proteins. To test these candidates and identify specific processing sites, in vitro cleavage assays are typically used, followed by polyacrylamide gel electrophoresis (SDS-PAGE) to separate and visualize the cleavage products. For the identification of cleavage sites, the sequences at the N- or C-terminal ends of the cleavage products need to be identified, which is the most challenging step in this procedure. Here, we describe a method for the reliable identification of the N-termini of polypeptides after separation by SDS-PAGE. The procedure relies on in-gel labeling of the N-terminal-free amino group by reductive dimethylation, followed by tryptic digestion and analysis of resulting peptides by mass spectrometry. N-terminal peptides are readily identified by the 28 Da mass dimethyl tag linked to their first amino acid.
Collapse
Affiliation(s)
- Stefanie Royek
- Department of Plant Physiology and Biochemistry, University of Hohenheim, Stuttgart, Germany
| | - Stefanie Brück
- Department of Plant Physiology and Biochemistry, University of Hohenheim, Stuttgart, Germany
| | - Jens Pfannstiel
- Core Facility Hohenheim, Mass Spectrometry Unit, University of Hohenheim, Stuttgart, Germany
| | - Annick Stintzi
- Department of Plant Physiology and Biochemistry, University of Hohenheim, Stuttgart, Germany
| | - Andreas Schaller
- Department of Plant Physiology and Biochemistry, University of Hohenheim, Stuttgart, Germany.
| |
Collapse
|
12
|
Jiang J, Stührwohldt N, Liu T, Huang Q, Li L, Zhang L, Gu H, Fan L, Zhong S, Schaller A, Qu LJ. Egg cell-secreted aspartic proteases ECS1/2 promote gamete attachment to prioritize the fertilization of egg cells over central cells in Arabidopsis. J Integr Plant Biol 2022; 64:2047-2059. [PMID: 36165344 DOI: 10.1111/jipb.13371] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/13/2022] [Accepted: 09/23/2022] [Indexed: 06/16/2023]
Abstract
Double fertilization is an innovative phenomenon in angiosperms, in which one sperm cell first fuses with the egg cell to produce the embryo, and then the other sperm fuses with the central cell to produce the endosperm. However, the molecular mechanism of the preferential fertilization of egg cells is poorly understood. In this study, we report that two egg cell-secreted aspartic proteases, ECS1 and ECS2, play an important role in promoting preferential fertilization of egg cells in Arabidopsis. We show that simultaneous loss of ECS1 and ECS2 function resulted in an approximately 20% reduction in fertility, which can be complemented by the full-length ECS1/2 but not by corresponding active site mutants or by secretion-defective versions of ECS1/2. Detailed phenotypic analysis revealed that the egg cell-sperm cell attachment was compromised in ecs1 ecs2 siliques. Limited pollination assays with cyclin-dependent kinase a1 (cdka;1) pollen showed that preferential egg cell fertilization was impaired in the ecs1 ecs2 mutant. Taken together, these results demonstrate that egg cells secret two aspartic proteases, ECS1 and ECS2, to facilitate the attachment of sperm cells to egg cells so that preferential fertilization of egg cells is achieved. This study reveals the molecular mechanism of preferential fertilization in Arabidopsis thaliana.
Collapse
Affiliation(s)
- Jiahao Jiang
- State Key Laboratory for Protein and Plant Gene Research, Peking-Tsinghua Center for Life Sciences at College of Life Sciences, Peking University, Beijing, 100871, China
| | - Nils Stührwohldt
- Department of Plant Physiology and Biochemistry, Institute of Biology, University of Hohenheim, Stuttgart, 70593, Germany
| | - Tianxu Liu
- State Key Laboratory for Protein and Plant Gene Research, Peking-Tsinghua Center for Life Sciences at College of Life Sciences, Peking University, Beijing, 100871, China
| | - Qingpei Huang
- State Key Laboratory for Protein and Plant Gene Research, Peking-Tsinghua Center for Life Sciences at College of Life Sciences, Peking University, Beijing, 100871, China
| | - Ling Li
- State Key Laboratory for Protein and Plant Gene Research, Peking-Tsinghua Center for Life Sciences at College of Life Sciences, Peking University, Beijing, 100871, China
| | - Li Zhang
- State Key Laboratory for Protein and Plant Gene Research, Peking-Tsinghua Center for Life Sciences at College of Life Sciences, Peking University, Beijing, 100871, China
| | - Hongya Gu
- State Key Laboratory for Protein and Plant Gene Research, Peking-Tsinghua Center for Life Sciences at College of Life Sciences, Peking University, Beijing, 100871, China
| | - Liumin Fan
- State Key Laboratory for Protein and Plant Gene Research, Peking-Tsinghua Center for Life Sciences at College of Life Sciences, Peking University, Beijing, 100871, China
| | - Sheng Zhong
- State Key Laboratory for Protein and Plant Gene Research, Peking-Tsinghua Center for Life Sciences at College of Life Sciences, Peking University, Beijing, 100871, China
| | - Andreas Schaller
- Department of Plant Physiology and Biochemistry, Institute of Biology, University of Hohenheim, Stuttgart, 70593, Germany
| | - Li-Jia Qu
- State Key Laboratory for Protein and Plant Gene Research, Peking-Tsinghua Center for Life Sciences at College of Life Sciences, Peking University, Beijing, 100871, China
| |
Collapse
|
13
|
Stintzi A, Schaller A. Biogenesis of post-translationally modified peptide signals for plant reproductive development. Curr Opin Plant Biol 2022; 69:102274. [PMID: 35977439 DOI: 10.1016/j.pbi.2022.102274] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/14/2022] [Revised: 06/23/2022] [Accepted: 07/04/2022] [Indexed: 06/15/2023]
Abstract
Post-translationally modified peptides (PMPs) are important regulators of plant growth and development. They are derived from larger inactive precursors by post-translational modification (PTM) and proteolytic processing to result in the bioactive peptide signals. We discuss how and why these modifications contribute to the bioactivity of inflorescence deficient in abscission (IDA), phytosulfokine (PSK), and peptides of the Casparian strip integrity factor (CIF) family, as signaling molecules during reproductive development. The emerging picture suggests that PTMs evolved to increase the specificity of interaction of PMPs with cognate receptors and of PMP precursors with processing proteases. Cleavage sites in PMP precursors are recognized by subtilases (SBTs) in a highly specific manner. SBT-mediated processing results in the activation of PMP signals regulating stress-induced flower drop, the formation of the embryonic cuticle, and pollen development.
Collapse
Affiliation(s)
- Annick Stintzi
- Department of Plant Physiology and Biochemistry, University of Hohenheim, 70593 Stuttgart, Germany
| | - Andreas Schaller
- Department of Plant Physiology and Biochemistry, University of Hohenheim, 70593 Stuttgart, Germany.
| |
Collapse
|
14
|
Kotla S, Van Smaalen S, Ramakrishnan S, Rekis T, Bao J, Schaller A, Eisele C, De Boissieu M, De Laitre G, Noohinejad L. Incommensurately modulated Rb 2ZnCl 4. Acta Cryst Sect A 2022. [DOI: 10.1107/s2053273322091677] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 03/19/2023]
|
15
|
Royek S, Bayer M, Pfannstiel J, Pleiss J, Ingram G, Stintzi A, Schaller A. Processing of a plant peptide hormone precursor facilitated by posttranslational tyrosine sulfation. Proc Natl Acad Sci U S A 2022; 119:e2201195119. [PMID: 35412898 PMCID: PMC9169856 DOI: 10.1073/pnas.2201195119] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/25/2022] [Accepted: 03/11/2022] [Indexed: 02/03/2023] Open
Abstract
Most peptide hormones and growth factors are matured from larger inactive precursor proteins by proteolytic processing and further posttranslational modification. Whether or how posttranslational modifications contribute to peptide bioactivity is still largely unknown. We address this question here for TWS1 (Twisted Seed 1), a peptide regulator of embryonic cuticle formation in Arabidopsis thaliana. Using synthetic peptides encompassing the N- and C-terminal processing sites and the recombinant TWS1 precursor as substrates, we show that the precursor is cleaved by the subtilase SBT1.8 at both the N and the C termini of TWS1. Recognition and correct processing at the N-terminal site depended on sulfation of an adjacent tyrosine residue. Arginine 302 of SBT1.8 was found to be required for sulfotyrosine binding and for accurate processing of the TWS1 precursor. The data reveal a critical role for posttranslational modification, here tyrosine sulfation of a plant peptide hormone precursor, in mediating processing specificity and peptide maturation.
Collapse
Affiliation(s)
- Stefanie Royek
- Department of Plant Physiology and Biochemistry, University of Hohenheim, 70593 Stuttgart, Germany
| | - Martin Bayer
- Department of Cell Biology, Max Planck Institute for Biology Tübingen, 72076 Tübingen, Germany
| | - Jens Pfannstiel
- Mass Spectrometry Unit, Core Facility Hohenheim, University of Hohenheim, 70593 Stuttgart, Germany
| | - Jürgen Pleiss
- Institute of Biochemistry and Technical Biochemistry, University of Stuttgart, 70569 Stuttgart, Germany
| | - Gwyneth Ingram
- Laboratoire Reproduction et Développement des Plantes, Université de Lyon, CNRS, Institut National de la Recherche pour l’Agriculture, l’Alimentation et l’Environnement, 69364 Lyon, France
| | - Annick Stintzi
- Department of Plant Physiology and Biochemistry, University of Hohenheim, 70593 Stuttgart, Germany
| | - Andreas Schaller
- Department of Plant Physiology and Biochemistry, University of Hohenheim, 70593 Stuttgart, Germany
| |
Collapse
|
16
|
Stintzi A, Stührwohldt N, Royek S, Schaller A. Identification of Cognate Protease/Substrate Pairs by Use of Class-Specific Inhibitors. Methods Mol Biol 2022; 2447:67-81. [PMID: 35583773 DOI: 10.1007/978-1-0716-2079-3_6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
Abstract
Many proteins are regulated post-translationally by proteolytic processing. This includes plant signaling peptides that are proteolytically released from larger precursor proteins. The proteases involved in the biogenesis of signaling peptides and in regulation of other proteins by limited proteolysis are largely unknown. Here we describe how protease inhibitors that are specific for a certain class of proteases can be employed for the identification of proteases that are responsible for the processing of a given target protein. After having identified the protease family to which the processing enzyme belongs, candidate proteases and the GFP-tagged target protein are agro-infiltrated for transient expression in N. benthamiana leaves. Cleavage products are analyzed on immuno-blots and specificity of cleavage is confirmed by co-expression of class-specific inhibitors. For the identification of processing sites within the target protein, cleavage product(s) are purified by immunoprecipitation followed by polyacrylamide gel electrophoresis and analyzed by mass spectrometry.
Collapse
Affiliation(s)
- Annick Stintzi
- Department of Plant Physiology and Biochemistry, University of Hohenheim, Stuttgart, Germany.
| | - Nils Stührwohldt
- Department of Plant Physiology and Biochemistry, University of Hohenheim, Stuttgart, Germany
| | - Stefanie Royek
- Department of Plant Physiology and Biochemistry, University of Hohenheim, Stuttgart, Germany
| | - Andreas Schaller
- Department of Plant Physiology and Biochemistry, University of Hohenheim, Stuttgart, Germany
| |
Collapse
|
17
|
Wang X, Pfannstiel J, Stintzi A, Schaller A. Peptide Backbone Modifications for the Assessment of Cleavage Site Relevance in Precursors of Signaling Peptides. Methods Mol Biol 2022; 2447:83-93. [PMID: 35583774 DOI: 10.1007/978-1-0716-2079-3_7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
Abstract
The physiological relevance of site-specific precursor processing for the biogenesis of peptide hormones and growth factors can be demonstrated in genetic complementation experiments, in which a gain of function is observed for the cleavable wild-type precursor, but not for a non-cleavable precursor mutant. Similarly, cleavable and non-cleavable synthetic peptides can be used in bioassays to test whether processing is required for bioactivity. In genetic complementation experiments, site-directed mutagenesis has to be used to mask a processing site against proteolysis. Peptide-based bioassays have the distinctive advantage that peptides can be protected against proteolytic cleavage by backbone modifications, i.e., without changing the amino acid sequence. Peptide backbone modifications have been employed to increase the metabolic stability of peptide drugs, and in basic research, to investigate whether processing at a certain site is required for precursor maturation and formation of the bioactive peptide. For this approach, it is important to show that modification of the peptide backbone has the desired effect and does indeed protect the respective peptide bond against proteolysis. This can be accomplished with the MALDI-TOF mass spectrometry-based assay we describe here.
Collapse
Affiliation(s)
- Xu Wang
- Department of Plant Physiology and Biochemistry, University of Hohenheim, Stuttgart, Germany
| | - Jens Pfannstiel
- Core Facility Hohenheim, Mass Spectrometry Unit, University of Hohenheim, Stuttgart, Germany
| | - Annick Stintzi
- Department of Plant Physiology and Biochemistry, University of Hohenheim, Stuttgart, Germany
| | - Andreas Schaller
- Department of Plant Physiology and Biochemistry, University of Hohenheim, Stuttgart, Germany.
| |
Collapse
|
18
|
Greifenhagen A, Braunstein I, Pfannstiel J, Yoshida S, Shirasu K, Schaller A, Spallek T. The Phtheirospermum japonicum isopentenyltransferase PjIPT1a regulates host cytokinin responses in Arabidopsis. New Phytol 2021; 232:1582-1590. [PMID: 34254310 DOI: 10.1111/nph.17615] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/27/2021] [Accepted: 07/08/2021] [Indexed: 06/13/2023]
Abstract
The hemiparasitic plant Phtheirospermum japonicum (Phtheirospermum) is a nutritional specialist that supplements its nutrient requirements by parasitizing other plants through haustoria. During parasitism, the Phtheirospermum haustorium transfers hypertrophy-inducing cytokinins (CKs) to the infected host root. The CK biosynthesis genes required for haustorium-derived CKs and the induction of hypertrophy are still unknown. We searched for haustorium-expressed isopentenyltransferases (IPTs) that catalyze the first step of CK biosynthesis, confirmed the specific expression by in vivo imaging of a promoter-reporter, and further analyzed the subcellular localization, the enzymatic function and contribution to inducing hypertrophy by studying CRISPR-Cas9-induced Phtheirospermum mutants. PjIPT1a was expressed in intrusive cells of the haustorium close to the host vasculature. PjIPT1a and its closest homolog PjIPT1b located to the cytosol and showed IPT activity in vitro with differences in substrate specificity. Mutating PjIPT1a abolished parasite-induced CK responses in the host. A homolog of PjIPT1a also was identified in the related weed Striga hermonthica. With PjIPT1a, we identified the IPT enzyme that induces CK responses in Phtheirospermum japonicum-infected Arabidopsis roots. We propose that PjIPT1a exemplifies how parasitism-related functions evolve through gene duplications and neofunctionalization.
Collapse
Affiliation(s)
- Anne Greifenhagen
- Department of Plant Physiology and Biochemistry, University of Hohenheim, Stuttgart, 70599, Germany
| | - Isabell Braunstein
- Department of Plant Physiology and Biochemistry, University of Hohenheim, Stuttgart, 70599, Germany
| | - Jens Pfannstiel
- Core Facility Hohenheim, Mass Spectrometry Unit, University of Hohenheim, Stuttgart, 70599, Germany
| | - Satoko Yoshida
- Division of Biological Science, Graduate School of Science and Technology, Nara Institute of Science and Technology, Ikoma, Nara, 630-0192, Japan
| | - Ken Shirasu
- RIKEN Center for Sustainable Resource Science, Yokohama, 230-0045, Japan
- Graduate School of Science, The University of Tokyo, Tokyo, 113-0033, Japan
| | - Andreas Schaller
- Department of Plant Physiology and Biochemistry, University of Hohenheim, Stuttgart, 70599, Germany
| | - Thomas Spallek
- Department of Plant Physiology and Biochemistry, University of Hohenheim, Stuttgart, 70599, Germany
| |
Collapse
|
19
|
Lange M, Loewe A, Schaller A. Association between different outcomes of students’ health status, health behavior & health literacy. Eur J Public Health 2021. [DOI: 10.1093/eurpub/ckab165.384] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
Abstract
Background
Next to classic full-time studies, a significant part of students of universities of applied (UAS) chooses part-time or dual study formats leading to double burden and higher stress levels. Up to now, the impact of different study formats on student's health status (HS) and health behavior (HB) has not been analysed in the context of UAS comprehensively. Also, the role of health literacy (HL) is not sufficiently investigated (Bai et al., 2019; Krüsmann, 2019; Plotnikoff et al., 2019). The primary aim of the study is to collect associated data on various aspects of HS, HB and HL of UAS students.
Methods
The prospective cohort study collects data on HS, HB and HL every semester from winter semester 20/21 to 22/23. HS is operationalized with stress level (SL), sleep quality (SQ) and life-study-satisfaction (LSS). HB included physical activity (PA), screen-time (ST) nutrition (NU), smoking, drinking and drug-use behavior (SDB); HL was assessed with the HLS-EU-Q16. At t1 n = 295 students (n: ♂=213; ♀=82; age∅=28,8 (SD = 8,49) could be included.
Results
Analysis revealed that all HS-domains correlated significantly with all HL (Range: r=.14** to .31**) and most HB-scores (NU: r=.22** to .35**; ST: r=.15** to .28**). PA correlated significantly with most HS-scores (r=.13** to .29**), but not with HL. Also, no correlations could be found between SQ, SDB and HS, HB and HL. With regard to gender difference, female students show significantly lower SDB (t = 4,38***), higher SL (t=-3,92***) and ST (t = 3,99***). Also, NU (R2 =, 30***; F = 27,21; f2 =, 32) and PA (R2 =, 34***; F = 17.9; f2 =, 37) reveal a strong explanation of variance of HS.
Conclusions
HS, HB and HL are complex dimension of students' health. The results indicate that HL AS a major impact on overall HS, but not necessarily on all HB-scores such as PA. Health promoting interventions should consider these findings on HS, HB and HL and target specific groups with individualized interventions.
Key messages
Health literacy plays an important role in students’ health, but is not linked to physical activity as a health behavior. Student health promotion should be target group specific and focus on different aspects of health behaviours.
Collapse
Affiliation(s)
- M Lange
- Department of Fitness & Health, IST-College, Düsseldorf, Germany
| | - A Loewe
- Department of Fitness & Health, IST-College, Düsseldorf, Germany
| | - A Schaller
- Department of Prevention and Rehabilitation, German Sports University, Cologne, Germany
| |
Collapse
|
20
|
Abstract
A revision of the emphorine bee genus Ancyloscelis in Argentina is presented. The genus extends from the United States to the center of Argentina, but the maximum diversity of morphological structures is found among South American species. Its species form two distinctive groups regarding their mouthparts: one of them with hooked setae on the proboscis, and the other one with simple or plumose setae on the proboscis. To the first group belong in Argentina, A. bonariensis Brèthes, A. halictoides (Holmberg), A. mesopotamica (Holmberg), and the new species A. holmergi. To the second group belong in Argentina A. apiformis (Fabricius), A. romeroi (Holmberg), A. saltensis Rodríguez Roig-Alsina, and A. nigricornis Rodríguez Roig-Alsina. Lectotype designations are made for Leptergatis bonariensis Brèthes and Leptergatis mesopotamica Holmberg. Ancyloscelis turmalis Vachal is a junior new synonym of Ancyloscelis mesopotamica. The synonymy of Ancyloscelis gigas Friese as junior synonym of Ancyloscelis halictoides is confirmed. Descriptions, illustrations, and a key to the species are provided.
Collapse
Affiliation(s)
- A Schaller
- Museo Argentino de Ciencias Naturales "Bernardino Rivadavia", División Entomología, Av. A. Gallardo 470, 1405 Buenos Aires, Argentina..
| | - A Roig-Alsina
- Museo Argentino de Ciencias Naturales "Bernardino Rivadavia", División Entomología, Av. A. Gallardo 470, 1405 Buenos Aires, Argentina..
| |
Collapse
|
21
|
Yogarajah J, Gouveia C, Iype J, Häfliger S, Schaller A, Nuoffer J, Fux M, Gautschi M. Efficacy and safety of secukinumab for the treatment of severe ABCA12 deficiency-related ichthyosis in a child. Skin Health Dis 2021; 1:e25. [PMID: 35664977 PMCID: PMC9060064 DOI: 10.1002/ski2.25] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/17/2020] [Revised: 02/25/2021] [Accepted: 03/04/2021] [Indexed: 12/16/2022]
Abstract
Background Patients with severe autosomal recessive congenital ichthyosis (ARCI) show a T helper 17/interleukin 17 (Th17/IL17) skewing in their skin and serum, resembling the inflammatory profile of psoriatic patients. Secukinumab, an IL-17A inhibitor, has shown clinical efficacy in patients with moderate-to-severe plaque psoriasis. Aims To test the clinical efficacy and safety of secukinumab in a paediatric patient with ATP-binding cassette subfamily A member 12 deficiency-related severe erythrodermic ARCI. Materials & Methods 6-months therapeutic trial. During the first 4-weeks induction period, the patient received weekly subcutaneous injections of 150 mg secukinumab (five injections in total). During the following 20-weeks maintenance period, the patient was given a subcutaneous injection of 150 mg secukinumab every 4 weeks. Result & Discussion After the 6-months therapy period, there was a 48% reduction from the baseline Ichthyosis-Area-Severity-Index (-Erythema/-Scaling) score. The treatment was well tolerated. Moreover, cytokine analysis revealed a reduction of keratinocyte-derived proinflammatory cytokines and an abrogation of Th17-skewing during therapy. Conclusion Further studies are needed to evaluate the effects of the use of IL-17A inhibition in ARCI patients.
Collapse
Affiliation(s)
- J. Yogarajah
- Division of Paediatric Endocrinology, Diabetology and MetabolismDepartment of PaediatricsUniversity Hospital BernInselspitalBernSwitzerland
| | - C. Gouveia
- Division of Paediatric Endocrinology, Diabetology and MetabolismDepartment of PaediatricsUniversity Hospital BernInselspitalBernSwitzerland,Department of DermatologyUniversity Hospital BernInselspitalBernSwitzerland
| | - J. Iype
- University Institute of Clinical ChemistryUniversity Hospital BernInselspitalBernSwitzerland
| | - S. Häfliger
- Division of Paediatric Endocrinology, Diabetology and MetabolismDepartment of PaediatricsUniversity Hospital BernInselspitalBernSwitzerland,Department of DermatologyUniversity Hospital BernInselspitalBernSwitzerland
| | - A. Schaller
- Department of Human GeneticsUniversity Hospital BernInselspitalBernSwitzerland
| | - J.M. Nuoffer
- Division of Paediatric Endocrinology, Diabetology and MetabolismDepartment of PaediatricsUniversity Hospital BernInselspitalBernSwitzerland,University Institute of Clinical ChemistryUniversity Hospital BernInselspitalBernSwitzerland
| | - M. Fux
- University Institute of Clinical ChemistryUniversity Hospital BernInselspitalBernSwitzerland
| | - M. Gautschi
- Division of Paediatric Endocrinology, Diabetology and MetabolismDepartment of PaediatricsUniversity Hospital BernInselspitalBernSwitzerland,University Institute of Clinical ChemistryUniversity Hospital BernInselspitalBernSwitzerland
| |
Collapse
|
22
|
Ogawa S, Wakatake T, Spallek T, Ishida JK, Sano R, Kurata T, Demura T, Yoshida S, Ichihashi Y, Schaller A, Shirasu K. Subtilase activity in intrusive cells mediates haustorium maturation in parasitic plants. Plant Physiol 2021; 185:1381-1394. [PMID: 33793894 PMCID: PMC8133603 DOI: 10.1093/plphys/kiaa001] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/31/2020] [Accepted: 09/28/2020] [Indexed: 05/11/2023]
Abstract
Parasitic plants that infect crops are devastating to agriculture throughout the world. These parasites develop a unique inducible organ called the haustorium that connects the vascular systems of the parasite and host to establish a flow of water and nutrients. Upon contact with the host, the haustorial epidermal cells at the interface with the host differentiate into specific cells called intrusive cells that grow endophytically toward the host vasculature. Following this, some of the intrusive cells re-differentiate to form a xylem bridge (XB) that connects the vasculatures of the parasite and host. Despite the prominent role of intrusive cells in host infection, the molecular mechanisms mediating parasitism in the intrusive cells remain poorly understood. In this study, we investigated differential gene expression in the intrusive cells of the facultative parasite Phtheirospermum japonicum in the family Orobanchaceae by RNA-sequencing of laser-microdissected haustoria. We then used promoter analyses to identify genes that are specifically induced in intrusive cells, and promoter fusions with genes encoding fluorescent proteins to develop intrusive cell-specific markers. Four of the identified intrusive cell-specific genes encode subtilisin-like serine proteases (SBTs), whose biological functions in parasitic plants are unknown. Expression of SBT inhibitors in intrusive cells inhibited both intrusive cell and XB development and reduced auxin response levels adjacent to the area of XB development. Therefore, we propose that subtilase activity plays an important role in haustorium development in P. japonicum.
Collapse
Affiliation(s)
- Satoshi Ogawa
- RIKEN Center for Sustainable Resource Science, Yokohama 230-0045, Japan
| | - Takanori Wakatake
- RIKEN Center for Sustainable Resource Science, Yokohama 230-0045, Japan
- Graduate School of Science, The University of Tokyo, Tokyo 113-0033, Japan
- Present address: Department of Molecular Plant Physiology and Biophysics, University of Würzburg, Würzburg 97082, Germany
| | - Thomas Spallek
- RIKEN Center for Sustainable Resource Science, Yokohama 230-0045, Japan
- Department of Plant Physiology and Biochemistry, University of Hohenheim, Stuttgart 70599, Germany
| | - Juliane K Ishida
- RIKEN Center for Sustainable Resource Science, Yokohama 230-0045, Japan
- Graduate School of Science, The University of Tokyo, Tokyo 113-0033, Japan
| | - Ryosuke Sano
- Division of Biological Science, Graduate School of Science and Technology, Nara Institute of Science and Technology, Ikoma, Nara 630-0192, Japan
| | - Tetsuya Kurata
- Division of Biological Science, Graduate School of Science and Technology, Nara Institute of Science and Technology, Ikoma, Nara 630-0192, Japan
| | - Taku Demura
- Division of Biological Science, Graduate School of Science and Technology, Nara Institute of Science and Technology, Ikoma, Nara 630-0192, Japan
| | - Satoko Yoshida
- RIKEN Center for Sustainable Resource Science, Yokohama 230-0045, Japan
- Division of Biological Science, Graduate School of Science and Technology, Nara Institute of Science and Technology, Ikoma, Nara 630-0192, Japan
- PRESTO, Japan Science and Technology Agency, Kawaguchi, Saitama 332-0012, Japan
| | - Yasunori Ichihashi
- RIKEN Center for Sustainable Resource Science, Yokohama 230-0045, Japan
- PRESTO, Japan Science and Technology Agency, Kawaguchi, Saitama 332-0012, Japan
- RIKEN BioResource Research Center, Tsukuba, Ibaraki 305-0074, Japan
| | - Andreas Schaller
- Department of Plant Physiology and Biochemistry, University of Hohenheim, Stuttgart 70599, Germany
| | - Ken Shirasu
- RIKEN Center for Sustainable Resource Science, Yokohama 230-0045, Japan
- Graduate School of Science, The University of Tokyo, Tokyo 113-0033, Japan
- Author for communication: , Present address: Department of Botany, Institute of Biosciences, University of São Paulo, São Paulo, Brazil
| |
Collapse
|
23
|
Stührwohldt N, Bühler E, Sauter M, Schaller A. Phytosulfokine (PSK) precursor processing by subtilase SBT3.8 and PSK signaling improve drought stress tolerance in Arabidopsis. J Exp Bot 2021; 72:3427-3440. [PMID: 33471900 DOI: 10.1093/jxb/erab017] [Citation(s) in RCA: 28] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/21/2020] [Accepted: 01/17/2021] [Indexed: 05/06/2023]
Abstract
Increasing drought stress poses a severe threat to agricultural productivity. Plants, however, have evolved numerous mechanisms to cope with such environmental stress. Here we report that the stress-induced production of a peptide signal contributes to stress tolerance. The expression of phytosulfokine (PSK) peptide precursor genes, and transcripts of three subtilisin-like serine proteases, SBT1.4, SBT3.7, and SBT3.8, were found to be up-regulated in response to osmotic stress. Stress symptoms were more pronounced in sbt3.8 loss-of-function mutants and could be alleviated by PSK treatment. Osmotic stress tolerance was improved in plants overexpressing the PSK1 precursor (proPSK1) or SBT3.8, resulting in higher fresh weight and improved lateral root development in transgenic plants compared with wild-type plants. We further showed that SBT3.8 is involved in the biogenesis of the bioactive PSK peptide. ProPSK1 was cleaved by SBT3.8 at the C-terminus of the PSK pentapeptide. Processing by SBT3.8 depended on the aspartic acid residue directly following the cleavage site. ProPSK1 processing was impaired in the sbt3.8 mutant. The data suggest that increased expression of proPSK1 in response to osmotic stress followed by the post-translational processing of proPSK1 by SBT3.8 leads to the production of PSK as a peptide signal for stress mitigation.
Collapse
Affiliation(s)
- Nils Stührwohldt
- Department of Plant Physiology and Biochemistry, Institute of Biology, University of Hohenheim, Stuttgart, Germany
| | - Eric Bühler
- Department of Plant Physiology and Biochemistry, Institute of Biology, University of Hohenheim, Stuttgart, Germany
| | - Margret Sauter
- Plant Developmental Biology and Physiology, University of Kiel, Kiel, Germany
| | - Andreas Schaller
- Department of Plant Physiology and Biochemistry, Institute of Biology, University of Hohenheim, Stuttgart, Germany
| |
Collapse
|
24
|
Aker M, Altenmüller K, Beglarian A, Behrens J, Berlev A, Besserer U, Bieringer B, Blaum K, Block F, Bornschein B, Bornschein L, Böttcher M, Brunst T, Caldwell TS, La Cascio L, Chilingaryan S, Choi W, Díaz Barrero D, Debowski K, Deffert M, Descher M, Doe PJ, Dragoun O, Drexlin G, Dyba S, Edzards F, Eitel K, Ellinger E, Engel R, Enomoto S, Fedkevych M, Felden A, Formaggio JA, Fränkle FM, Franklin GB, Friedel F, Fulst A, Gauda K, Gil W, Glück F, Grössle R, Gumbsheimer R, Höhn T, Hannen V, Haußmann N, Helbing K, Hickford S, Hiller R, Hillesheimer D, Hinz D, Houdy T, Huber A, Jansen A, Köllenberger L, Karl C, Kellerer J, Kippenbrock L, Klein M, Kopmann A, Korzeczek M, Kovalík A, Krasch B, Krause H, Lasserre T, Le TL, Lebeda O, Le Guennic N, Lehnert B, Lokhov A, Lopez Poyato JM, Müller K, Machatschek M, Malcherek E, Mark M, Marsteller A, Martin EL, Melzer C, Mertens S, Niemes S, Oelpmann P, Osipowicz A, Parno DS, Poon AWP, Priester F, Röllig M, Röttele C, Rest O, Robertson RGH, Rodenbeck C, Ryšavý M, Sack R, Saenz A, Schaller A, Schäfer P, Schimpf L, Schlösser M, Schlösser K, Schlüter L, Schrank M, Schulz B, Šefčík M, Seitz-Moskaliuk H, Sibille V, Siegmann D, Slezák M, Spanier F, Steidl M, Sturm M, Sun M, Telle HH, Thümmler T, Thorne LA, Titov N, Tkachev I, Trost N, Vénos D, Valerius K, Vizcaya Hernández AP, Wüstling S, Weber M, Weinheimer C, Weiss C, Welte S, Wendel J, Wilkerson JF, Wolf J, Xu W, Yen YR, Zadoroghny S, Zeller G. Bound on 3+1 Active-Sterile Neutrino Mixing from the First Four-Week Science Run of KATRIN. Phys Rev Lett 2021; 126:091803. [PMID: 33750167 DOI: 10.1103/physrevlett.126.091803] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/13/2020] [Revised: 01/06/2021] [Accepted: 01/22/2021] [Indexed: 06/12/2023]
Abstract
We report on the light sterile neutrino search from the first four-week science run of the KATRIN experiment in 2019. Beta-decay electrons from a high-purity gaseous molecular tritium source are analyzed by a high-resolution MAC-E filter down to 40 eV below the endpoint at 18.57 keV. We consider the framework with three active neutrinos and one sterile neutrino. The analysis is sensitive to the mass, m_{4}, of the fourth mass state for m_{4}^{2}≲1000 eV^{2} and to active-to-sterile neutrino mixing down to |U_{e4}|^{2}≳2×10^{-2}. No significant spectral distortion is observed and exclusion bounds on the sterile mass and mixing are reported. These new limits supersede the Mainz results for m_{4}^{2}≲1000 eV^{2} and improve the Troitsk bound for m_{4}^{2}<30 eV^{2}. The reactor and gallium anomalies are constrained for 100<Δm_{41}^{2}<1000 eV^{2}.
Collapse
Affiliation(s)
- M Aker
- Tritium Laboratory Karlsruhe (TLK), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - K Altenmüller
- Technische Universität München, James-Franck-Straße 1, 85748 Garching, Germany
- IRFU (DPhP and APC), CEA, Université Paris-Saclay, 91191 Gif-sur-Yvette, France
| | - A Beglarian
- Institute for Data Processing and Electronics (IPE), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - J Behrens
- Institute of Experimental Particle Physics (ETP), Karlsruhe Institute of Technology (KIT), Wolfgang-Gaede-Straße 1, 76131 Karlsruhe, Germany
- Institute for Astroparticle Physics (IAP), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - A Berlev
- Institute for Nuclear Research of Russian Academy of Sciences, 60th October Anniversary Prospect 7a, 117312 Moscow, Russia
| | - U Besserer
- Tritium Laboratory Karlsruhe (TLK), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - B Bieringer
- Institut für Kernphysik, Westfälische Wilhelms-Universität Münster, Wilhelm-Klemm-Straße 9, 48149 Münster, Germany
| | - K Blaum
- Max-Planck-Institut für Kernphysik, Saupfercheckweg 1, 69117 Heidelberg, Germany
| | - F Block
- Institute of Experimental Particle Physics (ETP), Karlsruhe Institute of Technology (KIT), Wolfgang-Gaede-Straße 1, 76131 Karlsruhe, Germany
| | - B Bornschein
- Tritium Laboratory Karlsruhe (TLK), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - L Bornschein
- Institute for Astroparticle Physics (IAP), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - M Böttcher
- Institut für Kernphysik, Westfälische Wilhelms-Universität Münster, Wilhelm-Klemm-Straße 9, 48149 Münster, Germany
| | - T Brunst
- Technische Universität München, James-Franck-Straße 1, 85748 Garching, Germany
- Max-Planck-Institut für Physik, Föhringer Ring 6, 80805 München, Germany
| | - T S Caldwell
- Department of Physics and Astronomy, University of North Carolina, Chapel Hill, North Carolina 27599, USA
- Triangle Universities Nuclear Laboratory, Durham, North Carolina 27708, USA
| | - L La Cascio
- Institute of Experimental Particle Physics (ETP), Karlsruhe Institute of Technology (KIT), Wolfgang-Gaede-Straße 1, 76131 Karlsruhe, Germany
| | - S Chilingaryan
- Institute for Data Processing and Electronics (IPE), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - W Choi
- Institute of Experimental Particle Physics (ETP), Karlsruhe Institute of Technology (KIT), Wolfgang-Gaede-Straße 1, 76131 Karlsruhe, Germany
| | - D Díaz Barrero
- Departamento de Química Física Aplicada, Universidad Autonoma de Madrid, Campus de Cantoblanco, 28049 Madrid, Spain
| | - K Debowski
- Department of Physics, Faculty of Mathematics and Natural Sciences, University of Wuppertal, Gaußstraße 20, 42119 Wuppertal, Germany
| | - M Deffert
- Institute of Experimental Particle Physics (ETP), Karlsruhe Institute of Technology (KIT), Wolfgang-Gaede-Straße 1, 76131 Karlsruhe, Germany
| | - M Descher
- Institute of Experimental Particle Physics (ETP), Karlsruhe Institute of Technology (KIT), Wolfgang-Gaede-Straße 1, 76131 Karlsruhe, Germany
| | - P J Doe
- Center for Experimental Nuclear Physics and Astrophysics, and Deptartment of Physics, University of Washington, Seattle, Washington 98195, USA
| | - O Dragoun
- Nuclear Physics Institute of the CAS, v. v. i., CZ-250 68 Řež, Czech Republic
| | - G Drexlin
- Institute of Experimental Particle Physics (ETP), Karlsruhe Institute of Technology (KIT), Wolfgang-Gaede-Straße 1, 76131 Karlsruhe, Germany
| | - S Dyba
- Institut für Kernphysik, Westfälische Wilhelms-Universität Münster, Wilhelm-Klemm-Straße 9, 48149 Münster, Germany
| | - F Edzards
- Technische Universität München, James-Franck-Straße 1, 85748 Garching, Germany
- Max-Planck-Institut für Physik, Föhringer Ring 6, 80805 München, Germany
| | - K Eitel
- Institute for Astroparticle Physics (IAP), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - E Ellinger
- Department of Physics, Faculty of Mathematics and Natural Sciences, University of Wuppertal, Gaußstraße 20, 42119 Wuppertal, Germany
| | - R Engel
- Institute for Astroparticle Physics (IAP), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - S Enomoto
- Center for Experimental Nuclear Physics and Astrophysics, and Deptartment of Physics, University of Washington, Seattle, Washington 98195, USA
| | - M Fedkevych
- Institut für Kernphysik, Westfälische Wilhelms-Universität Münster, Wilhelm-Klemm-Straße 9, 48149 Münster, Germany
| | - A Felden
- Institute for Astroparticle Physics (IAP), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - J A Formaggio
- Laboratory for Nuclear Science, Massachusetts Institute of Technology, 77 Massachusetts Ave, Cambridge, Massachusetts 02139, USA
| | - F M Fränkle
- Institute for Astroparticle Physics (IAP), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - G B Franklin
- Department of Physics, Carnegie Mellon University, Pittsburgh, Pennsylvania 15213, USA
| | - F Friedel
- Institute of Experimental Particle Physics (ETP), Karlsruhe Institute of Technology (KIT), Wolfgang-Gaede-Straße 1, 76131 Karlsruhe, Germany
| | - A Fulst
- Institut für Kernphysik, Westfälische Wilhelms-Universität Münster, Wilhelm-Klemm-Straße 9, 48149 Münster, Germany
| | - K Gauda
- Institut für Kernphysik, Westfälische Wilhelms-Universität Münster, Wilhelm-Klemm-Straße 9, 48149 Münster, Germany
| | - W Gil
- Institute for Astroparticle Physics (IAP), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - F Glück
- Institute for Astroparticle Physics (IAP), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - R Grössle
- Tritium Laboratory Karlsruhe (TLK), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - R Gumbsheimer
- Institute for Astroparticle Physics (IAP), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - T Höhn
- Institute for Astroparticle Physics (IAP), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - V Hannen
- Institut für Kernphysik, Westfälische Wilhelms-Universität Münster, Wilhelm-Klemm-Straße 9, 48149 Münster, Germany
| | - N Haußmann
- Department of Physics, Faculty of Mathematics and Natural Sciences, University of Wuppertal, Gaußstraße 20, 42119 Wuppertal, Germany
| | - K Helbing
- Department of Physics, Faculty of Mathematics and Natural Sciences, University of Wuppertal, Gaußstraße 20, 42119 Wuppertal, Germany
| | - S Hickford
- Institute of Experimental Particle Physics (ETP), Karlsruhe Institute of Technology (KIT), Wolfgang-Gaede-Straße 1, 76131 Karlsruhe, Germany
| | - R Hiller
- Institute of Experimental Particle Physics (ETP), Karlsruhe Institute of Technology (KIT), Wolfgang-Gaede-Straße 1, 76131 Karlsruhe, Germany
| | - D Hillesheimer
- Tritium Laboratory Karlsruhe (TLK), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - D Hinz
- Institute for Astroparticle Physics (IAP), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - T Houdy
- Technische Universität München, James-Franck-Straße 1, 85748 Garching, Germany
- Max-Planck-Institut für Physik, Föhringer Ring 6, 80805 München, Germany
| | - A Huber
- Institute of Experimental Particle Physics (ETP), Karlsruhe Institute of Technology (KIT), Wolfgang-Gaede-Straße 1, 76131 Karlsruhe, Germany
| | - A Jansen
- Institute for Astroparticle Physics (IAP), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - L Köllenberger
- Institute for Astroparticle Physics (IAP), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - C Karl
- Technische Universität München, James-Franck-Straße 1, 85748 Garching, Germany
- Max-Planck-Institut für Physik, Föhringer Ring 6, 80805 München, Germany
| | - J Kellerer
- Institute of Experimental Particle Physics (ETP), Karlsruhe Institute of Technology (KIT), Wolfgang-Gaede-Straße 1, 76131 Karlsruhe, Germany
| | - L Kippenbrock
- Center for Experimental Nuclear Physics and Astrophysics, and Deptartment of Physics, University of Washington, Seattle, Washington 98195, USA
| | - M Klein
- Institute of Experimental Particle Physics (ETP), Karlsruhe Institute of Technology (KIT), Wolfgang-Gaede-Straße 1, 76131 Karlsruhe, Germany
- Institute for Astroparticle Physics (IAP), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - A Kopmann
- Institute for Data Processing and Electronics (IPE), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - M Korzeczek
- Institute of Experimental Particle Physics (ETP), Karlsruhe Institute of Technology (KIT), Wolfgang-Gaede-Straße 1, 76131 Karlsruhe, Germany
| | - A Kovalík
- Nuclear Physics Institute of the CAS, v. v. i., CZ-250 68 Řež, Czech Republic
| | - B Krasch
- Tritium Laboratory Karlsruhe (TLK), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - H Krause
- Institute for Astroparticle Physics (IAP), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - T Lasserre
- IRFU (DPhP and APC), CEA, Université Paris-Saclay, 91191 Gif-sur-Yvette, France
| | - T L Le
- Tritium Laboratory Karlsruhe (TLK), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - O Lebeda
- Nuclear Physics Institute of the CAS, v. v. i., CZ-250 68 Řež, Czech Republic
| | - N Le Guennic
- Max-Planck-Institut für Physik, Föhringer Ring 6, 80805 München, Germany
| | - B Lehnert
- Institute for Nuclear and Particle Astrophysics and Nuclear Science Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, USA
| | - A Lokhov
- Institute for Nuclear Research of Russian Academy of Sciences, 60th October Anniversary Prospect 7a, 117312 Moscow, Russia
- Institut für Kernphysik, Westfälische Wilhelms-Universität Münster, Wilhelm-Klemm-Straße 9, 48149 Münster, Germany
| | - J M Lopez Poyato
- Departamento de Química Física Aplicada, Universidad Autonoma de Madrid, Campus de Cantoblanco, 28049 Madrid, Spain
| | - K Müller
- Institute for Astroparticle Physics (IAP), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - M Machatschek
- Institute of Experimental Particle Physics (ETP), Karlsruhe Institute of Technology (KIT), Wolfgang-Gaede-Straße 1, 76131 Karlsruhe, Germany
| | - E Malcherek
- Institute for Astroparticle Physics (IAP), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - M Mark
- Institute for Astroparticle Physics (IAP), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - A Marsteller
- Tritium Laboratory Karlsruhe (TLK), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - E L Martin
- Department of Physics and Astronomy, University of North Carolina, Chapel Hill, North Carolina 27599, USA
- Triangle Universities Nuclear Laboratory, Durham, North Carolina 27708, USA
| | - C Melzer
- Tritium Laboratory Karlsruhe (TLK), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - S Mertens
- Technische Universität München, James-Franck-Straße 1, 85748 Garching, Germany
- Max-Planck-Institut für Physik, Föhringer Ring 6, 80805 München, Germany
| | - S Niemes
- Tritium Laboratory Karlsruhe (TLK), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - P Oelpmann
- Institut für Kernphysik, Westfälische Wilhelms-Universität Münster, Wilhelm-Klemm-Straße 9, 48149 Münster, Germany
| | - A Osipowicz
- University of Applied Sciences (HFD) Fulda, Leipziger Straße 123, 36037 Fulda, Germany
| | - D S Parno
- Department of Physics, Carnegie Mellon University, Pittsburgh, Pennsylvania 15213, USA
| | - A W P Poon
- Institute for Nuclear and Particle Astrophysics and Nuclear Science Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, USA
| | - F Priester
- Tritium Laboratory Karlsruhe (TLK), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - M Röllig
- Tritium Laboratory Karlsruhe (TLK), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - C Röttele
- Tritium Laboratory Karlsruhe (TLK), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
- Institute of Experimental Particle Physics (ETP), Karlsruhe Institute of Technology (KIT), Wolfgang-Gaede-Straße 1, 76131 Karlsruhe, Germany
- Institute for Astroparticle Physics (IAP), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - O Rest
- Institut für Kernphysik, Westfälische Wilhelms-Universität Münster, Wilhelm-Klemm-Straße 9, 48149 Münster, Germany
| | - R G H Robertson
- Center for Experimental Nuclear Physics and Astrophysics, and Deptartment of Physics, University of Washington, Seattle, Washington 98195, USA
| | - C Rodenbeck
- Institut für Kernphysik, Westfälische Wilhelms-Universität Münster, Wilhelm-Klemm-Straße 9, 48149 Münster, Germany
| | - M Ryšavý
- Nuclear Physics Institute of the CAS, v. v. i., CZ-250 68 Řež, Czech Republic
| | - R Sack
- Institut für Kernphysik, Westfälische Wilhelms-Universität Münster, Wilhelm-Klemm-Straße 9, 48149 Münster, Germany
| | - A Saenz
- Institut für Physik, Humboldt-Universität zu Berlin, Newtonstraße 15, 12489 Berlin, Germany
| | - A Schaller
- Technische Universität München, James-Franck-Straße 1, 85748 Garching, Germany
- Max-Planck-Institut für Physik, Föhringer Ring 6, 80805 München, Germany
| | - P Schäfer
- Tritium Laboratory Karlsruhe (TLK), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - L Schimpf
- Institute of Experimental Particle Physics (ETP), Karlsruhe Institute of Technology (KIT), Wolfgang-Gaede-Straße 1, 76131 Karlsruhe, Germany
| | - M Schlösser
- Tritium Laboratory Karlsruhe (TLK), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - K Schlösser
- Institute for Astroparticle Physics (IAP), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - L Schlüter
- Technische Universität München, James-Franck-Straße 1, 85748 Garching, Germany
- Max-Planck-Institut für Physik, Föhringer Ring 6, 80805 München, Germany
| | - M Schrank
- Institute for Astroparticle Physics (IAP), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - B Schulz
- Institut für Physik, Humboldt-Universität zu Berlin, Newtonstraße 15, 12489 Berlin, Germany
| | - M Šefčík
- Nuclear Physics Institute of the CAS, v. v. i., CZ-250 68 Řež, Czech Republic
| | - H Seitz-Moskaliuk
- Institute of Experimental Particle Physics (ETP), Karlsruhe Institute of Technology (KIT), Wolfgang-Gaede-Straße 1, 76131 Karlsruhe, Germany
| | - V Sibille
- Laboratory for Nuclear Science, Massachusetts Institute of Technology, 77 Massachusetts Ave, Cambridge, Massachusetts 02139, USA
| | - D Siegmann
- Technische Universität München, James-Franck-Straße 1, 85748 Garching, Germany
- Max-Planck-Institut für Physik, Föhringer Ring 6, 80805 München, Germany
| | - M Slezák
- Technische Universität München, James-Franck-Straße 1, 85748 Garching, Germany
- Max-Planck-Institut für Physik, Föhringer Ring 6, 80805 München, Germany
| | - F Spanier
- Institute for Astroparticle Physics (IAP), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - M Steidl
- Institute for Astroparticle Physics (IAP), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - M Sturm
- Tritium Laboratory Karlsruhe (TLK), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - M Sun
- Center for Experimental Nuclear Physics and Astrophysics, and Deptartment of Physics, University of Washington, Seattle, Washington 98195, USA
| | - H H Telle
- Departamento de Química Física Aplicada, Universidad Autonoma de Madrid, Campus de Cantoblanco, 28049 Madrid, Spain
| | - T Thümmler
- Institute for Astroparticle Physics (IAP), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - L A Thorne
- Department of Physics, Carnegie Mellon University, Pittsburgh, Pennsylvania 15213, USA
| | - N Titov
- Institute for Nuclear Research of Russian Academy of Sciences, 60th October Anniversary Prospect 7a, 117312 Moscow, Russia
| | - I Tkachev
- Institute for Nuclear Research of Russian Academy of Sciences, 60th October Anniversary Prospect 7a, 117312 Moscow, Russia
| | - N Trost
- Institute for Astroparticle Physics (IAP), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - D Vénos
- Nuclear Physics Institute of the CAS, v. v. i., CZ-250 68 Řež, Czech Republic
| | - K Valerius
- Institute for Astroparticle Physics (IAP), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - A P Vizcaya Hernández
- Department of Physics, Carnegie Mellon University, Pittsburgh, Pennsylvania 15213, USA
| | - S Wüstling
- Institute for Data Processing and Electronics (IPE), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - M Weber
- Institute for Data Processing and Electronics (IPE), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - C Weinheimer
- Institut für Kernphysik, Westfälische Wilhelms-Universität Münster, Wilhelm-Klemm-Straße 9, 48149 Münster, Germany
| | - C Weiss
- Project, Process, and Quality Management (PPQ), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - S Welte
- Tritium Laboratory Karlsruhe (TLK), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - J Wendel
- Tritium Laboratory Karlsruhe (TLK), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - J F Wilkerson
- Department of Physics and Astronomy, University of North Carolina, Chapel Hill, North Carolina 27599, USA
- Triangle Universities Nuclear Laboratory, Durham, North Carolina 27708, USA
| | - J Wolf
- Institute of Experimental Particle Physics (ETP), Karlsruhe Institute of Technology (KIT), Wolfgang-Gaede-Straße 1, 76131 Karlsruhe, Germany
| | - W Xu
- Laboratory for Nuclear Science, Massachusetts Institute of Technology, 77 Massachusetts Ave, Cambridge, Massachusetts 02139, USA
| | - Y-R Yen
- Department of Physics, Carnegie Mellon University, Pittsburgh, Pennsylvania 15213, USA
| | - S Zadoroghny
- Institute for Nuclear Research of Russian Academy of Sciences, 60th October Anniversary Prospect 7a, 117312 Moscow, Russia
| | - G Zeller
- Tritium Laboratory Karlsruhe (TLK), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| |
Collapse
|
25
|
Stührwohldt N, Ehinger A, Thellmann K, Schaller A. Processing and Formation of Bioactive CLE40 Peptide Are Controlled by Posttranslational Proline Hydroxylation. Plant Physiol 2020; 184:1573-1584. [PMID: 32907884 PMCID: PMC7608152 DOI: 10.1104/pp.20.00528] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/29/2020] [Accepted: 08/27/2020] [Indexed: 06/01/2023]
Abstract
Small posttranslationally modified signaling peptides are proteolytically derived from larger precursor proteins and subject to several additional steps of modification, including Pro hydroxylation, Hyp glycosylation, and/or Tyr sulfation. The processing proteases and the relevance of posttranslational modifications for peptide biogenesis and activity are largely unknown. In this study these questions were addressed for the Clavata3/Endosperm Surrounding Region (CLE) peptide CLE40, a peptide regulator of stem cell differentiation in the Arabidopsis (Arabidopsis thaliana) root meristem. We identify three subtilases (SBT1.4, SBT1.7, and SBT4.13) that cleave the CLE40 precursor redundantly at two sites. C-terminal processing releases the mature peptide from its precursor and is thus required for signal biogenesis. SBT-mediated cleavage at a second site within the mature peptide attenuates the signal. The second cleavage is prevented by Pro hydroxylation, resulting in the formation of mature and bioactive CLE40 in planta. Our data reveal a role for posttranslational modification by Pro hydroxylation in the regulation of CLE40 formation and activity.
Collapse
Affiliation(s)
- Nils Stührwohldt
- Department of Plant Physiology and Biochemistry, Institute of Biology, University of Hohenheim, 70593 Stuttgart, Germany
| | - Alexandra Ehinger
- Department of Plant Physiology and Biochemistry, Institute of Biology, University of Hohenheim, 70593 Stuttgart, Germany
| | - Kerstin Thellmann
- Department of Plant Physiology and Biochemistry, Institute of Biology, University of Hohenheim, 70593 Stuttgart, Germany
| | - Andreas Schaller
- Department of Plant Physiology and Biochemistry, Institute of Biology, University of Hohenheim, 70593 Stuttgart, Germany
| |
Collapse
|
26
|
Stührwohldt N, Scholl S, Lang L, Katzenberger J, Schumacher K, Schaller A. The biogenesis of CLEL peptides involves several processing events in consecutive compartments of the secretory pathway. eLife 2020; 9:e55580. [PMID: 32297855 PMCID: PMC7162652 DOI: 10.7554/elife.55580] [Citation(s) in RCA: 23] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2020] [Accepted: 04/05/2020] [Indexed: 01/12/2023] Open
Abstract
Post-translationally modified peptides are involved in many aspects of plant growth and development. The maturation of these peptides from their larger precursors is still poorly understood. We show here that the biogenesis of CLEL6 and CLEL9 peptides in Arabidopsis thaliana requires a series of processing events in consecutive compartments of the secretory pathway. Following cleavage of the signal peptide upon entry into the endoplasmic reticulum (ER), the peptide precursors are processed in the cis-Golgi by the subtilase SBT6.1. SBT6.1-mediated cleavage within the variable domain allows for continued passage of the partially processed precursors through the secretory pathway, and for subsequent post-translational modifications including tyrosine sulfation and proline hydroxylation within, and proteolytic maturation after exit from the Golgi. Activation by subtilases including SBT3.8 in post-Golgi compartments depends on the N-terminal aspartate of the mature peptides. Our work highlights the complexity of post-translational precursor maturation allowing for stringent control of peptide biogenesis.
Collapse
Affiliation(s)
- Nils Stührwohldt
- Department of Plant Physiology and Biochemistry, Institute of Biology, University of HohenheimStuttgartGermany
| | - Stefan Scholl
- Department of Cell Biology, Centre for Organismal Studies, Heidelberg UniversityHeidelbergGermany
| | - Lisa Lang
- Department of Plant Physiology and Biochemistry, Institute of Biology, University of HohenheimStuttgartGermany
| | - Julia Katzenberger
- Department of Plant Physiology and Biochemistry, Institute of Biology, University of HohenheimStuttgartGermany
| | - Karin Schumacher
- Department of Cell Biology, Centre for Organismal Studies, Heidelberg UniversityHeidelbergGermany
| | - Andreas Schaller
- Department of Plant Physiology and Biochemistry, Institute of Biology, University of HohenheimStuttgartGermany
| |
Collapse
|
27
|
Reichardt S, Piepho HP, Stintzi A, Schaller A. Peptide signaling for drought-induced tomato flower drop. Science 2020; 367:1482-1485. [PMID: 32217727 DOI: 10.1126/science.aaz5641] [Citation(s) in RCA: 67] [Impact Index Per Article: 16.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2019] [Accepted: 02/27/2020] [Indexed: 12/14/2022]
Abstract
The premature abscission of flowers and fruits limits crop yield under environmental stress. Drought-induced flower drop in tomato plants was found to be regulated by phytosulfokine (PSK), a peptide hormone previously known for its growth-promoting and immune-modulating activities. PSK formation in response to drought stress depends on phytaspase 2, a subtilisin-like protease of the phytaspase subtype that generates the peptide hormone by aspartate-specific processing of the PSK precursor in the tomato flower pedicel. The mature peptide acts in the abscission zone where it induces expression of cell wall hydrolases that execute the abscission process. Our results provide insight into the molecular control of abscission as regulated by proteolytic processing to generate a small plant peptide hormone.
Collapse
Affiliation(s)
- S Reichardt
- Department of Plant Physiology and Biochemistry, University of Hohenheim, Stuttgart, Germany
| | - H-P Piepho
- Biostatistics Unit, Institute of Crop Science, University of Hohenheim, Stuttgart, Germany
| | - A Stintzi
- Department of Plant Physiology and Biochemistry, University of Hohenheim, Stuttgart, Germany.
| | - A Schaller
- Department of Plant Physiology and Biochemistry, University of Hohenheim, Stuttgart, Germany.
| |
Collapse
|
28
|
Doll NM, Royek S, Fujita S, Okuda S, Chamot S, Stintzi A, Widiez T, Hothorn M, Schaller A, Geldner N, Ingram G. A two-way molecular dialogue between embryo and endosperm is required for seed development. Science 2020; 367:431-435. [PMID: 31974252 DOI: 10.1126/science.aaz4131] [Citation(s) in RCA: 65] [Impact Index Per Article: 16.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/06/2019] [Accepted: 12/18/2019] [Indexed: 12/17/2023]
Abstract
The plant embryonic cuticle is a hydrophobic barrier deposited de novo by the embryo during seed development. At germination, it protects the seedling from water loss and is, thus, critical for survival. Embryonic cuticle formation is controlled by a signaling pathway involving the ABNORMAL LEAF SHAPE1 subtilase and the two GASSHO receptor-like kinases. We show that a sulfated peptide, TWISTED SEED1 (TWS1), acts as a GASSHO ligand. Cuticle surveillance depends on the action of the subtilase, which, unlike the TWS1 precursor and the GASSHO receptors, is not produced in the embryo but in the neighboring endosperm. Subtilase-mediated processing of the embryo-derived TWS1 precursor releases the active peptide, triggering GASSHO-dependent cuticle reinforcement in the embryo. Thus, a bidirectional molecular dialogue between embryo and endosperm safeguards cuticle integrity before germination.
Collapse
Affiliation(s)
- N M Doll
- Laboratoire Reproduction et Développement des Plantes, University of Lyon, ENS de Lyon, UCB Lyon 1, CNRS, INRAE, F-69342, Lyon, France
| | - S Royek
- Department of Plant Physiology and Biochemistry, University of Hohenheim, 70599 Stuttgart, Germany
| | - S Fujita
- Department of Plant Molecular Biology, University of Lausanne, 1015 Lausanne, Switzerland
| | - S Okuda
- Structural Plant Biology Laboratory, Department of Botany and Plant Biology, University of Geneva, 1211 Geneva, Switzerland
| | - S Chamot
- Laboratoire Reproduction et Développement des Plantes, University of Lyon, ENS de Lyon, UCB Lyon 1, CNRS, INRAE, F-69342, Lyon, France
| | - A Stintzi
- Department of Plant Physiology and Biochemistry, University of Hohenheim, 70599 Stuttgart, Germany
| | - T Widiez
- Laboratoire Reproduction et Développement des Plantes, University of Lyon, ENS de Lyon, UCB Lyon 1, CNRS, INRAE, F-69342, Lyon, France
| | - M Hothorn
- Structural Plant Biology Laboratory, Department of Botany and Plant Biology, University of Geneva, 1211 Geneva, Switzerland
| | - A Schaller
- Department of Plant Physiology and Biochemistry, University of Hohenheim, 70599 Stuttgart, Germany
| | - N Geldner
- Department of Plant Molecular Biology, University of Lausanne, 1015 Lausanne, Switzerland
| | - G Ingram
- Laboratoire Reproduction et Développement des Plantes, University of Lyon, ENS de Lyon, UCB Lyon 1, CNRS, INRAE, F-69342, Lyon, France.
| |
Collapse
|
29
|
Haj Ahmad F, Wu XN, Stintzi A, Schaller A, Schulze WX. The Systemin Signaling Cascade As Derived from Time Course Analyses of the Systemin-responsive Phosphoproteome. Mol Cell Proteomics 2019; 18:1526-1542. [PMID: 31138643 PMCID: PMC6683004 DOI: 10.1074/mcp.ra119.001367] [Citation(s) in RCA: 20] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2019] [Revised: 05/20/2019] [Indexed: 11/06/2022] Open
Abstract
Systemin is a small peptide with important functions in plant wound response signaling. Although the transcriptional responses of systemin action are well described, the signaling cascades involved in systemin perception and signal transduction at the protein level are poorly understood. Here we used a tomato cell suspension culture system to profile phosphoproteomic responses induced by systemin and its inactive Thr17Ala analog, allowing us to reconstruct a systemin-specific kinase/phosphatase signaling network. Our time-course analysis revealed early phosphorylation events at the plasma membrane, such as dephosphorylation of H+-ATPase, rapid phosphorylation of NADPH-oxidase and Ca2+-ATPase. Later responses involved transient phosphorylation of small GTPases, vesicle trafficking proteins and transcription factors. Based on a correlation analysis of systemin-induced phosphorylation profiles, we predicted substrate candidates for 44 early systemin-responsive kinases, which includes receptor kinases and downstream kinases such as MAP kinases, as well as nine phosphatases. We propose a regulatory module in which H+-ATPase LHA1 is rapidly de-phosphorylated at its C-terminal regulatory residue T955 by phosphatase PLL5, resulting in the alkalization of the growth medium within 2 mins of systemin treatment. We found the MAP kinase MPK2 to have increased phosphorylation level at its activating TEY-motif at 15 min post-treatment. The predicted interaction of MPK2 with LHA1 was confirmed by in vitro kinase assays, suggesting that the H+-ATPase LHA1 is re-activated by MPK2 later in the systemin response. Our data set provides a resource of proteomic events involved in systemin signaling that will be valuable for further in-depth functional studies in elucidation of systemin signaling cascades.
Collapse
Affiliation(s)
- Fatima Haj Ahmad
- ‡University of Hohenheim, Institute of Molecular Plant Physiology, 70593 Stuttgart, Germany
| | - Xu Na Wu
- ‡University of Hohenheim, Institute of Molecular Plant Physiology, 70593 Stuttgart, Germany
| | - Annick Stintzi
- ‡University of Hohenheim, Institute of Molecular Plant Physiology, 70593 Stuttgart, Germany
| | - Andreas Schaller
- ‡University of Hohenheim, Institute of Molecular Plant Physiology, 70593 Stuttgart, Germany
| | - Waltraud X Schulze
- ‡University of Hohenheim, Institute of Molecular Plant Physiology, 70593 Stuttgart, Germany.
| |
Collapse
|
30
|
Schaller A, Roig-Alsina A. The nesting habits and flower relationships of the bee Melitoma ameghinoi (Holmberg) (Hymenoptera, Apidae), with notes on its taxonomy and distribution. J NAT HIST 2019. [DOI: 10.1080/00222933.2019.1658819] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
Affiliation(s)
- A. Schaller
- División Entomología, Museo Argentino de Ciencias Naturales “Bernardino Rivadavia”, Buenos Aires, Argentina
| | - A. Roig-Alsina
- División Entomología, Museo Argentino de Ciencias Naturales “Bernardino Rivadavia”, Buenos Aires, Argentina
| |
Collapse
|
31
|
Schaller A, Delmas C, De Blay F. [Allergic respiratory diseases related to mould in the home]. Rev Mal Respir 2019; 36:889-901. [PMID: 31303366 DOI: 10.1016/j.rmr.2018.10.619] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/28/2017] [Accepted: 10/23/2018] [Indexed: 10/26/2022]
Abstract
Exposure to mould is a potential risk factor for asthma in both adults and children. In adult, the relation between exposure, sensitization and symptoms has been demonstrated in severe asthmatics sensitized to Alternaria. For children, exposure to mould in childhood is a risk factor for asthma in both atopic and non-atopic individuals. Exposure or sensitization to moulds are a risk factor for severe asthma and/or exacerbations in children. There appears to be a causal relationship between exposure and asthma. This link seems less significant in adults. However, in adults mould sensitive asthma seems to determine a phenotype of severe asthma associated with more marked obstructive lung disease. Moulds can stimulate either innate or the acquired immunity. They are responsible for a marked Th2 inflammation leading to more severe asthma. Besides the immunological mechanisms, toxic mechanisms can also intervene. It is therefore not correct to reduce the effect of moulds, particularly in respiratory symptoms, to only allergic mechanisms.
Collapse
Affiliation(s)
- A Schaller
- Pôle de pathologie thoracique, service de pneumologie, Nouvel hôpital civil, 1, place de l'hôpital, 67094 Strasbourg cedex, France.
| | - C Delmas
- Pôle de pathologie thoracique, service de pneumologie, Nouvel hôpital civil, 1, place de l'hôpital, 67094 Strasbourg cedex, France
| | - F De Blay
- Pôle de pathologie thoracique, service de pneumologie, Nouvel hôpital civil, 1, place de l'hôpital, 67094 Strasbourg cedex, France; EA 3072, Fédération de médecine translationnelle, FHU OMICARE université de Strasbourg, 67000 Strasbourg, France
| |
Collapse
|
32
|
Akdis D, Saguner AM, Medeiros-Domingo A, Schaller A, Balmer C, Steffel J, Brunckhorst C, Duru F. Multiple clinical profiles of families with the short QT syndrome. Europace 2019; 20:f113-f121. [PMID: 29016797 DOI: 10.1093/europace/eux186] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2016] [Accepted: 06/03/2017] [Indexed: 11/14/2022] Open
Abstract
Aims Short QT syndrome (SQTS) is a rare cardiac channelopathy characterized by a shortened corrected QT (QTc)-interval that can lead to ventricular arrhythmias and sudden cardiac death. The aim of this study was to investigate the clinical phenotypes and long-term outcomes of three families harbouring genetic mutations associated with the SQTS. Methods and results Clinical data included medical history, physical examination, 12-lead ECG, 24-h Holter-ECG, and transthoracic echocardiography from three index patients and their first-degree relatives. Next generation clinical exome sequencing and genetic cascade screening were performed in index patients and their relatives, respectively. Two index patients experienced malignant ventricular arrhythmias and one patient suffered from arrhythmogenic syncope during a median follow-up period of 8 years. They all had genetic mutations associated with the SQTS. Two mutations were found in the KCNH2 gene, and one in the CACNA2D gene. One patient had an additional SCN10A variant. Alive and mutation-positive family members had short QTc-intervals, but no further phenotypic manifestations. None of the mutation-negative family members had an abnormal ECG or any symptoms. In all patients with shortened QTc-intervals, the QTc-interval had a low long-term variability and QTc shortening always remained detectable by 12-lead ECG. Conclusion This study shows the variety of phenotypic manifestations in different families with SQTS. It further emphasizes the importance of a 12-lead ECG for early diagnosis, and the utility of next generation sequencing for the identification of mutations associated with the SQTS.
Collapse
Affiliation(s)
- D Akdis
- Department of Cardiology, University Heart Center Zurich, Rämistrasse 100, CH-8091 Zurich, Switzerland
| | - A M Saguner
- Department of Cardiology, University Heart Center Zurich, Rämistrasse 100, CH-8091 Zurich, Switzerland
| | - A Medeiros-Domingo
- Department of Cardiology, Inselspital Bern, University Hospital Bern, Freiburgstrasse 8, CH-3010 Bern, Switzerland
| | - A Schaller
- Division of Human Genetics, Department of Pediatrics, Inselspital Bern, University Hospital Bern, Freiburgstrasse 8, CH-3010 Bern, Switzerland
| | - C Balmer
- Department of Cardiology, University Children's Hospital Zurich, Steinwiesstrasse 75, CH-8032 Zürich, Switzerland
| | - J Steffel
- Department of Cardiology, University Heart Center Zurich, Rämistrasse 100, CH-8091 Zurich, Switzerland
| | - C Brunckhorst
- Department of Cardiology, University Heart Center Zurich, Rämistrasse 100, CH-8091 Zurich, Switzerland
| | - F Duru
- Department of Cardiology, University Heart Center Zurich, Rämistrasse 100, CH-8091 Zurich, Switzerland
| |
Collapse
|
33
|
Stührwohldt N, Schaller A. Regulation of plant peptide hormones and growth factors by post-translational modification. Plant Biol (Stuttg) 2019; 21 Suppl 1:49-63. [PMID: 30047205 DOI: 10.1111/plb.12881] [Citation(s) in RCA: 54] [Impact Index Per Article: 10.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/11/2018] [Accepted: 07/20/2018] [Indexed: 05/24/2023]
Abstract
The number, diversity and significance of peptides as regulators of cellular differentiation, growth, development and defence of plants has long been underestimated. Peptides have now emerged as an important class of signals for cell-to-cell communication over short distances, and also for long-range signalling. We refer to these signalling molecules as peptide growth factors and peptide hormones, respectively. As compared to remarkable progress with respect to the mechanisms of peptide perception and signal transduction, the biogenesis of signalling peptides is still in its infancy. This review focuses on the biogenesis and activity of small post-translationally modified peptides. These peptides are derived from inactive pre-pro-peptides of approximately 70-120 amino acids. Multiple post-translational modifications (PTMs) may be required for peptide maturation and activation, including proteolytic processing, tyrosine sulfation, proline hydroxylation and hydroxyproline glycosylation. While many of the enzymes responsible for these modifications have been identified, their impact on peptide activity and signalling is not fully understood. These PTMs may or may not be required for bioactivity, they may inactivate the peptide or modify its signalling specificity, they may affect peptide stability or targeting, or its binding affinity with the receptor. In the present review, we will first introduce the peptides that undergo PTMs and for which these PTMs were shown to be functionally relevant. We will then discuss the different types of PTMs and the impact they have on peptide activity and plant growth and development. We conclude with an outlook on the open questions that need to be addressed in future research.
Collapse
Affiliation(s)
- N Stührwohldt
- Institute of Plant Physiology and Biotechnology, University of Hohenheim, Stuttgart, Germany
| | - A Schaller
- Institute of Plant Physiology and Biotechnology, University of Hohenheim, Stuttgart, Germany
| |
Collapse
|
34
|
Reichardt S, Repper D, Tuzhikov AI, Galiullina RA, Planas-Marquès M, Chichkova NV, Vartapetian AB, Stintzi A, Schaller A. The tomato subtilase family includes several cell death-related proteinases with caspase specificity. Sci Rep 2018; 8:10531. [PMID: 30002392 PMCID: PMC6043521 DOI: 10.1038/s41598-018-28769-0] [Citation(s) in RCA: 33] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/10/2018] [Accepted: 06/29/2018] [Indexed: 01/08/2023] Open
Abstract
Phytaspases are Asp-specific subtilisin-like plant proteases that have been likened to animal caspases with respect to their regulatory function in programmed cell death (PCD). We identified twelve putative phytaspase genes in tomato that differed widely in expression level and tissue-specific expression patterns. Most phytaspase genes are tandemly arranged on tomato chromosomes one, four, and eight, and many belong to taxon-specific clades, e.g. the P69 clade in the nightshade family, suggesting that these genes evolved by gene duplication after speciation. Five tomato phytaspases (SlPhyts) were expressed in N. benthamiana and purified to homogeneity. Substrate specificity was analyzed in a proteomics assay and with a panel of fluorogenic peptide substrates. Similar to animal caspases, SlPhyts recognized an extended sequence motif including Asp at the cleavage site. Clear differences in cleavage site preference were observed implying different substrates in vivo and, consequently, different physiological functions. A caspase-like function in PCD was confirmed for five of the seven tested phytaspases. Cell death was triggered by ectopic expression of SlPhyts 2, 3, 4, 5, 6 in tomato leaves by agro-infiltration, as well as in stably transformed transgenic tomato plants. SlPhyts 3, 4, and 5 were found to contribute to cell death under oxidative stress conditions.
Collapse
Affiliation(s)
- Sven Reichardt
- Institute of Plant Physiology and Biotechnology, University of Hohenheim, 70593, Stuttgart, Germany
| | - Dagmar Repper
- Institute of Plant Physiology and Biotechnology, University of Hohenheim, 70593, Stuttgart, Germany
| | - Alexander I Tuzhikov
- Belozersky Institute of Physico-Chemical Biology, Moscow State University, Moscow, 119991, Russia
| | - Raisa A Galiullina
- Belozersky Institute of Physico-Chemical Biology, Moscow State University, Moscow, 119991, Russia
| | - Marc Planas-Marquès
- Centre for Research in Agricultural Genomics, CSIC-IRTA-UAB-UB, Campus UAB, Bellaterra, Barcelona, 08193, Spain
| | - Nina V Chichkova
- Belozersky Institute of Physico-Chemical Biology, Moscow State University, Moscow, 119991, Russia
| | - Andrey B Vartapetian
- Belozersky Institute of Physico-Chemical Biology, Moscow State University, Moscow, 119991, Russia
| | - Annick Stintzi
- Institute of Plant Physiology and Biotechnology, University of Hohenheim, 70593, Stuttgart, Germany
| | - Andreas Schaller
- Institute of Plant Physiology and Biotechnology, University of Hohenheim, 70593, Stuttgart, Germany.
| |
Collapse
|
35
|
Schaller A, Stintzi A, Rivas S, Serrano I, Chichkova NV, Vartapetian AB, Martínez D, Guiamét JJ, Sueldo DJ, van der Hoorn RAL, Ramírez V, Vera P. From structure to function - a family portrait of plant subtilases. New Phytol 2018; 218:901-915. [PMID: 28467631 DOI: 10.1111/nph.14582] [Citation(s) in RCA: 71] [Impact Index Per Article: 11.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/01/2016] [Accepted: 03/13/2017] [Indexed: 05/20/2023]
Abstract
Contents Summary 901 I. Introduction 901 II. Biochemistry and structure of plant SBTs 902 III. Phylogeny of plant SBTs and family organization 903 IV. Physiological roles of plant SBTs 905 V. Conclusions and outlook 911 Acknowledgements 912 References 912 SUMMARY: Subtilases (SBTs) are serine peptidases that are found in all three domains of life. As compared with homologs in other Eucarya, plant SBTs are more closely related to archaeal and bacterial SBTs, with which they share many biochemical and structural features. However, in the course of evolution, functional diversification led to the acquisition of novel, plant-specific functions, resulting in the present-day complexity of the plant SBT family. SBTs are much more numerous in plants than in any other organism, and include enzymes involved in general proteolysis as well as highly specific processing proteases. Most SBTs are targeted to the cell wall, where they contribute to the control of growth and development by regulating the properties of the cell wall and the activity of extracellular signaling molecules. Plant SBTs affect all stages of the life cycle as they contribute to embryogenesis, seed development and germination, cuticle formation and epidermal patterning, vascular development, programmed cell death, organ abscission, senescence, and plant responses to their biotic and abiotic environments. In this article we provide a comprehensive picture of SBT structure and function in plants.
Collapse
Affiliation(s)
- Andreas Schaller
- Institute of Plant Physiology and Biotechnology, University of Hohenheim, Stuttgart, 70593, Germany
| | - Annick Stintzi
- Institute of Plant Physiology and Biotechnology, University of Hohenheim, Stuttgart, 70593, Germany
| | - Susana Rivas
- Laboratoire des Interactions Plantes-Microorganismes, LIPM, Université de Toulouse, INRA, CNRS, Castanet-Tolosan, 31326, France
| | - Irene Serrano
- Laboratoire des Interactions Plantes-Microorganismes, LIPM, Université de Toulouse, INRA, CNRS, Castanet-Tolosan, 31326, France
| | - Nina V Chichkova
- Belozersky Institute of Physico-Chemical Biology, Moscow State University, Moscow, 119991, Russia
| | - Andrey B Vartapetian
- Belozersky Institute of Physico-Chemical Biology, Moscow State University, Moscow, 119991, Russia
| | - Dana Martínez
- Instituto de Fisiología Vegetal, Universidad Nacional de La Plata, La Plata, 1900, Argentina
| | - Juan J Guiamét
- Instituto de Fisiología Vegetal, Universidad Nacional de La Plata, La Plata, 1900, Argentina
| | - Daniela J Sueldo
- The Plant Chemetics Laboratory, Department of Plant Sciences, University of Oxford, Oxford, OX1 3RB, UK
| | - Renier A L van der Hoorn
- The Plant Chemetics Laboratory, Department of Plant Sciences, University of Oxford, Oxford, OX1 3RB, UK
| | - Vicente Ramírez
- Institute for Plant Cell Biology and Biotechnology, Heinrich-Heine University, Düsseldorf, 40225, Germany
| | - Pablo Vera
- Institute for Plant Molecular and Cell Biology, Universidad Politécnica de Valencia-CSIC, Valencia, 46022, Spain
| |
Collapse
|
36
|
Beloshistov RE, Dreizler K, Galiullina RA, Tuzhikov AI, Serebryakova MV, Reichardt S, Shaw J, Taliansky ME, Pfannstiel J, Chichkova NV, Stintzi A, Schaller A, Vartapetian AB. Phytaspase-mediated precursor processing and maturation of the wound hormone systemin. New Phytol 2018; 218:1167-1178. [PMID: 28407256 DOI: 10.1111/nph.14568] [Citation(s) in RCA: 52] [Impact Index Per Article: 8.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/01/2016] [Accepted: 02/21/2017] [Indexed: 05/24/2023]
Abstract
Peptide hormones are implicated in many important aspects of plant life and are usually synthesized as precursor proteins. In contrast to animals, data for plant peptide hormone maturation are scarce and the specificity of processing enzyme(s) is largely unknown. Here we tested a hypothesis that processing of prosystemin, a precursor of tomato (Solanum lycopersicum) wound hormone systemin, is performed by phytaspases, aspartate-specific proteases of the subtilase family. Following the purification of phytaspase from tomato leaves, two tomato phytaspase genes were identified, the cDNAs were cloned and the recombinant enzymes were obtained after transient expression in Nicotiana benthamiana. The newly identified tomato phytaspases hydrolyzed prosystemin at two aspartate residues flanking the systemin sequence. Site-directed mutagenesis of the phytaspase cleavage sites in prosystemin abrogated not only the phytaspase-mediated processing of the prohormone in vitro, but also the ability of prosystemin to trigger the systemic wound response in vivo. The data show that the prohormone prosystemin requires processing for signal biogenesis and biological activity. The identification of phytaspases as the proteases involved in prosystemin maturation provides insight into the mechanisms of wound signaling in tomato. Our data also suggest a novel role for cell death-related proteases in mediating defense signaling in plants.
Collapse
Affiliation(s)
- Roman E Beloshistov
- Belozersky Institute of Physico-Chemical Biology, Moscow State University, Moscow, 119991, Russia
| | - Konrad Dreizler
- Institute of Plant Physiology and Biotechnology, University of Hohenheim, Stuttgart, 70593, Germany
| | - Raisa A Galiullina
- Belozersky Institute of Physico-Chemical Biology, Moscow State University, Moscow, 119991, Russia
| | - Alexander I Tuzhikov
- Belozersky Institute of Physico-Chemical Biology, Moscow State University, Moscow, 119991, Russia
| | - Marina V Serebryakova
- Belozersky Institute of Physico-Chemical Biology, Moscow State University, Moscow, 119991, Russia
| | - Sven Reichardt
- Institute of Plant Physiology and Biotechnology, University of Hohenheim, Stuttgart, 70593, Germany
| | - Jane Shaw
- The James Hutton Institute, Dundee, DD2 5DA, UK
| | | | - Jens Pfannstiel
- Core Facility Hohenheim, Mass Spectrometry Unit, University of Hohenheim, Stuttgart, 70593, Germany
| | - Nina V Chichkova
- Belozersky Institute of Physico-Chemical Biology, Moscow State University, Moscow, 119991, Russia
| | - Annick Stintzi
- Institute of Plant Physiology and Biotechnology, University of Hohenheim, Stuttgart, 70593, Germany
| | - Andreas Schaller
- Institute of Plant Physiology and Biotechnology, University of Hohenheim, Stuttgart, 70593, Germany
| | - Andrey B Vartapetian
- Belozersky Institute of Physico-Chemical Biology, Moscow State University, Moscow, 119991, Russia
| |
Collapse
|
37
|
Schaller A, Darvishsefat N, Schlücker E. Simulation and Experimental Investigation of Labyrinth Seals for Reciprocating Piston Compressors. Chem Eng Technol 2018. [DOI: 10.1002/ceat.201700698] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Affiliation(s)
- Andreas Schaller
- Friedrich-Alexander-University Erlangen-Nuremberg; Institute for Process Technology and Machinery; Cauerstrasse 4 91058 Erlangen Germany
| | - Novin Darvishsefat
- Friedrich-Alexander-University Erlangen-Nuremberg; Institute for Process Technology and Machinery; Cauerstrasse 4 91058 Erlangen Germany
| | - Eberhard Schlücker
- Friedrich-Alexander-University Erlangen-Nuremberg; Institute for Process Technology and Machinery; Cauerstrasse 4 91058 Erlangen Germany
| |
Collapse
|
38
|
Schaller A, Metz-Favre C, Guenard-Bilbaut L, De Blay F. [Is celecoxib a safe alternative for the Fernand Widal syndrome?]. Rev Mal Respir 2018; 35:149-159. [PMID: 29463423 DOI: 10.1016/j.rmr.2017.09.007] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2017] [Accepted: 09/17/2017] [Indexed: 10/18/2022]
Abstract
The Fernand Widal syndrome is a set of associations between asthma, nasal polyposis and aspirin sensitivity. Selective cyclo-oxygenase 2 (COX 2) inhibitors are recognized as being a therapeutic alternative in cases needing analgesic or anti-inflammatory treatment. In a retrospective study, we have compiled data concerning oral provocation tests (OPT) undertaken with celecoxib, one of most the selective COX 2 inhibitors, in eight patients with the Fernand Widal syndrome. They were compared with twenty-seven control patients with sensitivity to aspirin or non-steroidal anti-inflammatories, manifesting as asthma, urticaria or rhino-conjunctivitis. Four patients with the Fernand Widal syndrome developed bronchospasm after taking the usually recommended daily dose of celecoxib while all the control patients tolerated it. The Fernand Widal patients who reacted during the OPT had a lower threshold of reactivity to aspirin, a more severe reaction with aspirin, and/or more severe asthma. In patients with the Fernand Widal syndrome, celecoxib is not always a possible alternative to non-steroidal anti-inflammatory drugs. Its introduction must be carried out in a hospital environment under medical supervision.
Collapse
Affiliation(s)
- A Schaller
- Unité d'allergologie, pôle de pathologie thoracique, Nouvel hôpital civil, 1, place de l'Hôpital, 67000, Strasbourg, France.
| | - C Metz-Favre
- Unité d'allergologie, pôle de pathologie thoracique, Nouvel hôpital civil, 1, place de l'Hôpital, 67000, Strasbourg, France
| | - L Guenard-Bilbaut
- Unité d'allergologie, pôle de pathologie thoracique, Nouvel hôpital civil, 1, place de l'Hôpital, 67000, Strasbourg, France
| | - F De Blay
- Unité d'allergologie, pôle de pathologie thoracique, Nouvel hôpital civil, 1, place de l'Hôpital, 67000, Strasbourg, France; EA 3072, fédération de médecine translationnelle, FHU OMICARE, Strasbourg, France
| |
Collapse
|
39
|
Labuhn M, Vuaroqueaux V, Fina F, Schaller A, Nanni-Metellus I, Küng W, Eppenberger-Castori S, Martin P, Eppenberger U. Simultaneous Quantitative Detection of Relevant Biomarkers in Breast Cancer by Quantitative Real-Time PCR. Int J Biol Markers 2018. [DOI: 10.1177/172460080602100105] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
The assessment of ERα, PgR and HER2 status is routinely performed today to determine the endocrine responsiveness of breast cancer samples. Such determination is usually accomplished by means of immunohistochemistry and in case of HER2 amplification by means of fluorescent in situ hybridization (FISH). The analysis of these markers can be improved by simultaneous measurements using quantitative real-time PCR (Qrt-PCR). In this study we compared Qrt-PCR results for the assessment of mRNA levels of ERα, PgR, and the members of the human epidermal growth factor receptor family, HER1, HER2, HER3 and HER4. The results were obtained in two independent laboratories using two different methods, SYBR Green I and TaqMan probes, and different primers. By linear regression we demonstrated a good concordance for all six markers. The quantitative mRNA expression levels of ERα, PgR and HER2 also strongly correlated with the respective quantitative protein expression levels prospectively detected by EIA in both laboratories. In addition, HER2 mRNA expression levels correlated well with gene amplification detected by FISH in the same biopsies. Our results indicate that both Qrt-PCR methods were robust and sensitive tools for routine diagnostics and consistent with standard methodologies. The developed simultaneous assessment of several biomarkers is fast and labor effective and allows optimization of the clinical decision-making process in breast cancer tissue and/or core biopsies.
Collapse
Affiliation(s)
| | | | - F. Fina
- Laboratoire de Transfert d'Oncologie Biologique, Assistance - Publique Hôpitaux de Marseille - France
| | - A. Schaller
- Abteilung für Humangenetik, Medizinische Universitäts-Kinderklinik, Bern - Switzerland
| | - I. Nanni-Metellus
- Laboratoire de Transfert d'Oncologie Biologique, Assistance - Publique Hôpitaux de Marseille - France
| | - W. Küng
- Department of Research and Gynecology, University Clinics, Basel - Switzerland
| | | | - P.M. Martin
- Laboratoire de Transfert d'Oncologie Biologique, Assistance - Publique Hôpitaux de Marseille - France
| | - U. Eppenberger
- Stiftung Tumorbank Basel, STB, Riehen - Switzerland
- Department of Research and Gynecology, University Clinics, Basel - Switzerland
| |
Collapse
|
40
|
Chini A, Monte I, Zamarreño AM, Hamberg M, Lassueur S, Reymond P, Weiss S, Stintzi A, Schaller A, Porzel A, García-Mina JM, Solano R. An OPR3-independent pathway uses 4,5-didehydrojasmonate for jasmonate synthesis. Nat Chem Biol 2018; 14:171-178. [PMID: 29291349 DOI: 10.1038/nchembio.2540] [Citation(s) in RCA: 131] [Impact Index Per Article: 21.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2017] [Accepted: 11/09/2017] [Indexed: 01/16/2023]
Abstract
Biosynthesis of the phytohormone jasmonoyl-isoleucine (JA-Ile) requires reduction of the JA precursor 12-oxo-phytodienoic acid (OPDA) by OPDA reductase 3 (OPR3). Previous analyses of the opr3-1 Arabidopsis mutant suggested an OPDA signaling role independent of JA-Ile and its receptor COI1; however, this hypothesis has been challenged because opr3-1 is a conditional allele not completely impaired in JA-Ile biosynthesis. To clarify the role of OPR3 and OPDA in JA-independent defenses, we isolated and characterized a loss-of-function opr3-3 allele. Strikingly, opr3-3 plants remained resistant to necrotrophic pathogens and insect feeding, and activated COI1-dependent JA-mediated gene expression. Analysis of OPDA derivatives identified 4,5-didehydro-JA in wounded wild-type and opr3-3 plants. OPR2 was found to reduce 4,5-didehydro-JA to JA, explaining the accumulation of JA-Ile and activation of JA-Ile-responses in opr3-3 mutants. Our results demonstrate that in the absence of OPR3, OPDA enters the β-oxidation pathway to produce 4,5-ddh-JA as a direct precursor of JA and JA-Ile, thus identifying an OPR3-independent pathway for JA biosynthesis.
Collapse
Affiliation(s)
- Andrea Chini
- Department of Plant Molecular Genetics, National Centre for Biotechnology, Consejo Superior de Investigaciones Científicas (CNB-CSIC), Madrid, Spain
| | - Isabel Monte
- Department of Plant Molecular Genetics, National Centre for Biotechnology, Consejo Superior de Investigaciones Científicas (CNB-CSIC), Madrid, Spain
| | - Angel M Zamarreño
- Environmental Biology Department, University of Navarra, Navarre, Spain
| | - Mats Hamberg
- Division of Physiological Chemistry II, Department of Medical Biochemistry and Biophysics, Karolinska Institutet, Stockholm, Sweden
| | - Steve Lassueur
- Department of Plant Molecular Biology, University of Lausanne, Lausanne, Switzerland
| | - Philippe Reymond
- Department of Plant Molecular Biology, University of Lausanne, Lausanne, Switzerland
| | - Sally Weiss
- Institute of Plant Physiology and Biotechnology, University of Hohenheim, Stuttgart, Germany
| | - Annick Stintzi
- Institute of Plant Physiology and Biotechnology, University of Hohenheim, Stuttgart, Germany
| | - Andreas Schaller
- Institute of Plant Physiology and Biotechnology, University of Hohenheim, Stuttgart, Germany
| | - Andrea Porzel
- Department of Bioorganic Chemistry, Leibniz Institute of Plant Biochemistry, Halle, Germany
| | | | - Roberto Solano
- Department of Plant Molecular Genetics, National Centre for Biotechnology, Consejo Superior de Investigaciones Científicas (CNB-CSIC), Madrid, Spain
| |
Collapse
|
41
|
Renaud-Picard B, Schaller A, Canuet M, Pradignac A, Kessler L, Jegu J, Kessler R. Caractéristiques initiales des patients de la cohorte « COHYPOB » : étude des facteurs prédictifs de l’hypoventilation alvéolaire chronique chez l’obèse. Rev Mal Respir 2018. [DOI: 10.1016/j.rmr.2017.10.087] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
|
42
|
Stührwohldt N, Hohl M, Schardon K, Stintzi A, Schaller A. Post-translational maturation of IDA, a peptide signal controlling floral organ abscission in Arabidopsis. Commun Integr Biol 2017. [PMCID: PMC5824936 DOI: 10.1080/19420889.2017.1395119] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022] Open
Abstract
The abscission of sepals, petals and stamens in Arabidopsis flowers is controlled by a peptide signal called IDA (Inflorescence Deficient in Abscission). IDA belongs to the large group of small post-translationally modified signaling peptides that are synthesized as larger precursors and require proteolytic processing and specific side chain modifications for signal biogenesis. Using tissue-specific expression of proteinase inhibitors as a novel approach for loss-of-function analysis, we recently identified the peptidases responsible for IDA maturation within the large family of subtilisin-like proteinases (subtilases; SBTs). Further biochemical and physiological assays identified three SBTs (AtSBT5.2, AtSBT4.12, AtSBT4.13) that cleave the IDA precursor to generate the N-terminus of the mature peptide. The C-terminal processing enzyme(s) remain(s) to be identified. While proline hydroxylation was suggested as additional post-translational modification required for IDA maturation, hydroxylated and non-hydroxylated IDA peptides were found to be equally active in bioassays for abscission.
Collapse
Affiliation(s)
- Nils Stührwohldt
- Institute of Plant Physiology and Biotechnology, University of Hohenheim, Stuttgart, Germany
| | - Mathias Hohl
- Institute of Plant Physiology and Biotechnology, University of Hohenheim, Stuttgart, Germany
| | - Katharina Schardon
- Institute of Plant Physiology and Biotechnology, University of Hohenheim, Stuttgart, Germany
| | - Annick Stintzi
- Institute of Plant Physiology and Biotechnology, University of Hohenheim, Stuttgart, Germany
| | - Andreas Schaller
- Institute of Plant Physiology and Biotechnology, University of Hohenheim, Stuttgart, Germany
| |
Collapse
|
43
|
Stührwohldt N, Schardon K, Stintzi A, Schaller A. A Toolbox for the Analysis of Peptide Signal Biogenesis. Mol Plant 2017; 10:1023-1025. [PMID: 28735025 DOI: 10.1016/j.molp.2017.07.005] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/27/2017] [Revised: 07/12/2017] [Accepted: 07/13/2017] [Indexed: 06/07/2023]
Affiliation(s)
- Nils Stührwohldt
- Institute of Plant Physiology and Biotechnology, University of Hohenheim, 70593 Stuttgart, Germany
| | - Katharina Schardon
- Institute of Plant Physiology and Biotechnology, University of Hohenheim, 70593 Stuttgart, Germany
| | - Annick Stintzi
- Institute of Plant Physiology and Biotechnology, University of Hohenheim, 70593 Stuttgart, Germany
| | - Andreas Schaller
- Institute of Plant Physiology and Biotechnology, University of Hohenheim, 70593 Stuttgart, Germany.
| |
Collapse
|
44
|
Rudolf K, Grieben C, Petrowski K, Froböse I, Schaller A. Freiwillige vor! Effekte unterschiedlicher Strategien bei der Probandenrekrutierung für Akzelerometrie-Studien auf die resultierenden Daten. Das Gesundheitswesen 2017. [DOI: 10.1055/s-0037-1606054] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
Affiliation(s)
- K Rudolf
- Deutsche Sporthochschule Köln, Institut für Bewegungstherapie und bewegungsorientierte Prävention und Rehabilitation, Köln
| | - C Grieben
- Deutsche Sporthochschule Köln, Institut für Bewegungstherapie und bewegungsorientierte Prävention und Rehabilitation, Köln
| | - K Petrowski
- Universität Witten/Herdecke, Witten/Herdecke
| | - I Froböse
- Deutsche Sporthochschule Köln, Institut für Bewegungstherapie und bewegungsorientierte Prävention und Rehabilitation, Köln
- Deutsche Sporthochschule Köln, Zentrum für Gesundheit durch Sport und Bewegung, Köln
| | - A Schaller
- Deutsche Sporthochschule Köln, Institut für Bewegungstherapie und bewegungsorientierte Prävention und Rehabilitation, Köln
- IST-Hochschule für Management, Düsseldorf
| |
Collapse
|
45
|
Asatryan B, Schaller A, Seiler J, Lam A, Haeberlin A, Servatius H, Baldinger S, Goulouti E, Fuhrer J, Tanner H, Roten L, Noti F, Wilhelm M, Medeiros-Domingo A. P1598Genetic testing yield in survivors of unexplained cardiac arrest. Europace 2017. [DOI: 10.1093/ehjci/eux158.224] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
|
46
|
Hohl M, Stintzi A, Schaller A. A novel subtilase inhibitor in plants shows structural and functional similarities to protease propeptides. J Biol Chem 2017; 292:6389-6401. [PMID: 28223360 DOI: 10.1074/jbc.m117.775445] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/05/2017] [Revised: 02/13/2017] [Indexed: 12/24/2022] Open
Abstract
The propeptides of subtilisin-like serine proteinases (subtilases, SBTs) serve dual functions as intramolecular chaperones that are required for enzyme folding and as inhibitors of the mature proteases. SBT propeptides are homologous to the I9 family of protease inhibitors that have only been described in fungi. Here we report the identification and characterization of subtilisin propeptide-like inhibitor 1 (SPI-1) from Arabidopsis thaliana Sequence similarity and the shared β-α-β-β-α-β core structure identified SPI-1 as a member of the I9 inhibitor family and as the first independent I9 inhibitor in higher eukaryotes. SPI-1 was characterized as a high-affinity, tight-binding inhibitor of Arabidopsis subtilase SBT4.13 with Kd and Ki values in the picomolar range. SPI-1 acted as a stable inhibitor of SBT4.13 over the physiologically relevant range of pH, and its inhibitory profile included many other SBTs from plants but not bovine chymotrypsin or bacterial subtilisin A. Upon binding to SBT4.13, the C-terminal extension of SPI-1 was proteolytically cleaved. The last four amino acids at the newly formed C terminus of SPI-1 matched both the cleavage specificity of SBT4.13 and the consensus sequence of Arabidopsis SBTs at the junction of the propeptide with the catalytic domain. The data suggest that the C terminus of SPI-1 acts as a competitive inhibitor of target proteases as it remains bound to the active site in a product-like manner. SPI-1 thus resembles SBT propeptides with respect to its mode of protease inhibition. However, in contrast to SBT propeptides, SPI-1 could not substitute as a folding assistant for SBT4.13.
Collapse
Affiliation(s)
- Mathias Hohl
- From the Institute of Plant Physiology and Biotechnology, University of Hohenheim, D-70593 Stuttgart, Germany
| | - Annick Stintzi
- From the Institute of Plant Physiology and Biotechnology, University of Hohenheim, D-70593 Stuttgart, Germany
| | - Andreas Schaller
- From the Institute of Plant Physiology and Biotechnology, University of Hohenheim, D-70593 Stuttgart, Germany
| |
Collapse
|
47
|
Schardon K, Hohl M, Graff L, Pfannstiel J, Schulze W, Stintzi A, Schaller A. Precursor processing for plant peptide hormone maturation by subtilisin-like serine proteinases. Science 2016; 354:1594-1597. [PMID: 27940581 DOI: 10.1126/science.aai8550] [Citation(s) in RCA: 95] [Impact Index Per Article: 11.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/22/2016] [Accepted: 11/22/2016] [Indexed: 12/23/2022]
Abstract
Peptide hormones that regulate plant growth and development are derived from larger precursor proteins by proteolytic processing. Our study addressed the role of subtilisin-like proteinases (SBTs) in this process. Using tissue-specific expression of proteinase inhibitors as a tool to overcome functional redundancy, we found that SBT activity was required for the maturation of IDA (INFLORESCENCE DEFICIENT IN ABSCISSION), a peptide signal for the abscission of floral organs in Arabidopsis We identified three SBTs that process the IDA precursor in vitro, and this processing was shown to be required for the formation of mIDA (the mature and bioactive form of IDA) as the endogenous signaling peptide in vivo. Hence, SBTs act as prohormone convertases in plants, and several functionally redundant SBTs contribute to signal biogenesis.
Collapse
Affiliation(s)
- Katharina Schardon
- University of Hohenheim, Institute of Plant Physiology and Biotechnology, 70593 Stuttgart, Germany
| | - Mathias Hohl
- University of Hohenheim, Institute of Plant Physiology and Biotechnology, 70593 Stuttgart, Germany
| | - Lucile Graff
- University of Hohenheim, Institute of Plant Physiology and Biotechnology, 70593 Stuttgart, Germany
| | - Jens Pfannstiel
- Core Facility Hohenheim, Mass Spectrometry Unit, 70593 Stuttgart, Germany
| | - Waltraud Schulze
- University of Hohenheim, Department of Plant Systems Biology, 70593 Stuttgart, Germany
| | - Annick Stintzi
- University of Hohenheim, Institute of Plant Physiology and Biotechnology, 70593 Stuttgart, Germany
| | - Andreas Schaller
- University of Hohenheim, Institute of Plant Physiology and Biotechnology, 70593 Stuttgart, Germany.
| |
Collapse
|
48
|
Gasper R, Effenberger I, Kolesinski P, Terlecka B, Hofmann E, Schaller A. Dirigent Protein Mode of Action Revealed by the Crystal Structure of AtDIR6. Plant Physiol 2016; 172:2165-2175. [PMID: 27756822 PMCID: PMC5129718 DOI: 10.1104/pp.16.01281] [Citation(s) in RCA: 41] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/16/2016] [Accepted: 10/15/2016] [Indexed: 05/02/2023]
Abstract
Dirigent proteins impart stereoselectivity to phenoxy radical coupling reactions in plants and, thus, play an essential role in the biosynthesis of biologically active natural products. This includes the regioselective and enantioselective coupling and subsequent cyclization of two coniferyl alcohol radicals to pinoresinol as the committed step of lignan biosynthesis. The reaction is controlled by dirigent proteins, which, depending on the species and protein, direct the reaction to either (+)- or (-)-pinoresinol. We present the crystal structure of the (-)-pinoresinol forming DIRIGENT PROTEIN6 (AtDIR6) from Arabidopsis (Arabidopsis thaliana) with data to 1.4 Å resolution. The structure shows AtDIR6 as an eight-stranded antiparallel β-barrel that forms a trimer with spatially well-separated cavities for substrate binding. The binding cavities are two lobed, exhibiting two opposing pockets, each lined with a set of hydrophilic and potentially catalytic residues, including essential aspartic acids. These residues are conserved between (+) and (-)-pinoresinol-forming DIRs and required for activity. The structure supports a model in which two substrate radicals bind to each of the DIR monomers. With the aromatic rings fixed in the two pockets, the propionyl side chains face each other for radical-radical coupling, and stereoselectivity is determined by the exact positioning of the side chains. Extensive mutational analysis supports a previously unrecognized function for DIRs in catalyzing the cyclization of the bis-quinone methide reaction intermediate to yield (+)- or (-)-pinoresinol.
Collapse
Affiliation(s)
- Raphael Gasper
- Ruhr University Bochum, AG Protein Crystallography, Biophysics, 44801 Bochum, Germany (R.G., B.T., E.H.)
- University of Hohenheim, Institute of Plant Physiology and Biotechnology, 70593 Stuttgart, Germany (I.E., A.S); and
- University of Wroclaw, Laboratory of Biophysics, Faculty of Biotechnology, 50-383 Wroclaw, Poland (P.K.)
| | - Isabelle Effenberger
- Ruhr University Bochum, AG Protein Crystallography, Biophysics, 44801 Bochum, Germany (R.G., B.T., E.H.)
- University of Hohenheim, Institute of Plant Physiology and Biotechnology, 70593 Stuttgart, Germany (I.E., A.S); and
- University of Wroclaw, Laboratory of Biophysics, Faculty of Biotechnology, 50-383 Wroclaw, Poland (P.K.)
| | - Piotr Kolesinski
- Ruhr University Bochum, AG Protein Crystallography, Biophysics, 44801 Bochum, Germany (R.G., B.T., E.H.)
- University of Hohenheim, Institute of Plant Physiology and Biotechnology, 70593 Stuttgart, Germany (I.E., A.S); and
- University of Wroclaw, Laboratory of Biophysics, Faculty of Biotechnology, 50-383 Wroclaw, Poland (P.K.)
| | - Barbara Terlecka
- Ruhr University Bochum, AG Protein Crystallography, Biophysics, 44801 Bochum, Germany (R.G., B.T., E.H.)
- University of Hohenheim, Institute of Plant Physiology and Biotechnology, 70593 Stuttgart, Germany (I.E., A.S); and
- University of Wroclaw, Laboratory of Biophysics, Faculty of Biotechnology, 50-383 Wroclaw, Poland (P.K.)
| | - Eckhard Hofmann
- Ruhr University Bochum, AG Protein Crystallography, Biophysics, 44801 Bochum, Germany (R.G., B.T., E.H.);
- University of Hohenheim, Institute of Plant Physiology and Biotechnology, 70593 Stuttgart, Germany (I.E., A.S); and
- University of Wroclaw, Laboratory of Biophysics, Faculty of Biotechnology, 50-383 Wroclaw, Poland (P.K.)
| | - Andreas Schaller
- Ruhr University Bochum, AG Protein Crystallography, Biophysics, 44801 Bochum, Germany (R.G., B.T., E.H.);
- University of Hohenheim, Institute of Plant Physiology and Biotechnology, 70593 Stuttgart, Germany (I.E., A.S); and
- University of Wroclaw, Laboratory of Biophysics, Faculty of Biotechnology, 50-383 Wroclaw, Poland (P.K.)
| |
Collapse
|
49
|
Effenberger I, Harport M, Pfannstiel J, Klaiber I, Schaller A. Expression in Pichia pastoris and characterization of two novel dirigent proteins for atropselective formation of gossypol. Appl Microbiol Biotechnol 2016; 101:2021-2032. [PMID: 27858135 DOI: 10.1007/s00253-016-7997-3] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/04/2016] [Revised: 10/30/2016] [Accepted: 11/05/2016] [Indexed: 12/16/2022]
Abstract
We established an efficient fed-batch fermentation process for two novel dirigent proteins from cotton plants, GbDIR2 from Gossypium barbadense and GhDIR3 from G. hirsutum, using the engineered Pichia pastoris GlycoSwitch® SuperMan5 strain to prevent hyperglycosylation. The two (His)6-tagged proteins were purified by metal-chelate affinity chromatography and obtained in quantities of 12 and 15 mg L-1 of culture volume, respectively. Glycosylation sites were identified for the native and for the enzymatically deglycosylated proteins by mass spectrometry, confirming five to six of the seven predicted glycosylation sites in the NxS/T sequence context. The predominant glycan structure was Man5GlcNAc2 with, however, a significant contribution of Man4-10GlcNAc2. Both dirigent proteins (DIRs) mediated the formation of (+)-gossypol by atropselective coupling of hemigossypol radicals. Similar to previously characterized DIRs, GbDIR2 and GhDIR3 lacked oxidizing activity and depended on an oxidizing system (laccase/O2) for the generation of substrate radicals. In contrast to DIRs involved in the biosynthesis of lignans, glycosylation was not essential for function. Quantitative enzymatic deglycosylation yielded active GbDIR2 and GhDIR3 in excellent purity. The described fermentation process in combination with enzymatic deglycosylation will pave the way for mechanistic and structural studies and, eventually, the application of cotton DIRs in a biomimetic approach towards atropselective biaryl synthesis.
Collapse
Affiliation(s)
- Isabelle Effenberger
- Institute of Plant Physiology and Biotechnology, University of Hohenheim, 70593, Stuttgart, Germany
| | - Michael Harport
- Institute of Plant Physiology and Biotechnology, University of Hohenheim, 70593, Stuttgart, Germany
| | - Jens Pfannstiel
- Core Facility Hohenheim, Mass Spectrometry Unit, University of Hohenheim, 70593, Stuttgart, Germany
| | - Iris Klaiber
- Core Facility Hohenheim, Mass Spectrometry Unit, University of Hohenheim, 70593, Stuttgart, Germany
| | - Andreas Schaller
- Institute of Plant Physiology and Biotechnology, University of Hohenheim, 70593, Stuttgart, Germany.
| |
Collapse
|
50
|
Schaller A, Alayli A, Altin S, Biallas B, Falkowski G, Grieben C, Nitzsche A, Pförtner T, Pfaff H, Stock S, Froböse I. Die Brücke zwischen Wissenschaft und Praxis: Evidenzentwicklung in Prävention und Gesundheitsförderung – Struktur und Ziele des interdisziplinären Forschungsverbundes TRISEARCH. B & G 2016. [DOI: 10.1055/s-0042-112611] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
Affiliation(s)
- A. Schaller
- Institut für Bewegungstherapie und bewegungsorientierte Prävention und Rehabilitation, Deutsche Sporthochschule Köln
| | - A. Alayli
- Institut für Gesundheitsökonomie und Epidemiologie, Universität zu Köln
| | - S. Altin
- Institut für Gesundheitsökonomie und Epidemiologie, Universität zu Köln
| | - B. Biallas
- Institut für Bewegungstherapie und bewegungsorientierte Prävention und Rehabilitation, Deutsche Sporthochschule Köln
| | - G. Falkowski
- Institut für Bewegungstherapie und bewegungsorientierte Prävention und Rehabilitation, Deutsche Sporthochschule Köln
| | - C. Grieben
- Institut für Bewegungstherapie und bewegungsorientierte Prävention und Rehabilitation, Deutsche Sporthochschule Köln
| | - A. Nitzsche
- Institut für Medizinsoziologie, Versorgungsforschung und Rehabilitationswissenschaft, Universität zu Köln
| | - T. Pförtner
- Institut für Medizinsoziologie, Versorgungsforschung und Rehabilitationswissenschaft, Universität zu Köln
| | - H. Pfaff
- Institut für Medizinsoziologie, Versorgungsforschung und Rehabilitationswissenschaft, Universität zu Köln
| | - S. Stock
- Institut für Gesundheitsökonomie und Epidemiologie, Universität zu Köln
| | - I. Froböse
- Institut für Bewegungstherapie und bewegungsorientierte Prävention und Rehabilitation, Deutsche Sporthochschule Köln
| |
Collapse
|