1
|
Kuvaeva EE, Kulikova DA, Simonova OB, Mertsalov IB. Studying the Specific Localization of Toothrin Protein from Related D4 Family in Drosophila melanogaster. Russ J Dev Biol 2022. [DOI: 10.1134/s1062360422020072] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
|
2
|
Yurinskaya MM, Krasnov GS, Kulikova DA, Zatsepina OG, Vinokurov MG, Chuvakova LN, Rezvykh AP, Funikov SY, Morozov AV, Evgen'ev MB. H 2S counteracts proinflammatory effects of LPS through modulation of multiple pathways in human cells. Inflamm Res 2020; 69:481-495. [PMID: 32157318 DOI: 10.1007/s00011-020-01329-x] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2019] [Revised: 02/12/2020] [Accepted: 02/22/2020] [Indexed: 12/31/2022] Open
Abstract
BACKGROUND Hydrogen sulfide donors reduce inflammatory signaling in vitro and in vivo. The biological effect mediated by H2S donors depends on the kinetics of the gas release from the donor molecule. However, the molecular mechanisms of H2S-induced immunomodulation were poorly addressed. Here, we studied the effect of two different hydrogen sulfide (H2S)-producing agents on the generation of the LPS-induced inflammatory mediators. Importantly, we investigated the transcriptomic changes that take place in human cells after the LPS challenge, combined with the pretreatment with a slow-releasing H2S donor-GYY4137. METHODS We investigated the effects of GYY4137 and sodium hydrosulfide on the release of proinflammatory molecules such as ROS, NO and TNF-α from LPS-treated human SH-SY5Y neuroblastoma and the THP-1 promonocytic cell lines. Transcriptomic and RT-qPCR studies using THP-1 cells were performed to monitor the effects of the GYY4137 on multiple signaling pathways, including various immune-related and proinflammatory genes after combined action of LPS and GYY4137. RESULTS The GYY4137 and sodium hydrosulfide differed in the ability to reduce the production of the LPS-evoked proinflammatory mediators. The pre-treatment with GYY4137 resulted in a drastic down-regulation of many TNF-α effectors that are induced by LPS treatment in THP-1 cells. Furthermore, GYY4137 pretreatment of LPS-exposed cells ameliorates the LPS-mediated induction of multiple pro-inflammatory genes and decreases expression of immunoproteasome genes. Besides, in these experiments we detected the up-regulation of several important pathways that are inhibited by LPS. CONCLUSION Based on the obtained results we believe that our transcriptomic analysis significantly contributes to the understanding of the molecular mechanisms of anti-inflammatory and cytoprotective activity of hydrogen sulfide donors, and highlights their potential against LPS challenges and other forms of inflammation.
Collapse
Affiliation(s)
- M M Yurinskaya
- Engelhardt Institute of Molecular Biology RAS, Vavilov str. 32, Moscow, 119991, Russia.,Institute of Cell Biophysics RAS, PSCBR RAS, Puschino, 142290, Russia
| | - G S Krasnov
- Engelhardt Institute of Molecular Biology RAS, Vavilov str. 32, Moscow, 119991, Russia
| | - D A Kulikova
- Koltzov Institute of Developmental Biology RAS, Moscow, 119991, Russia
| | - O G Zatsepina
- Engelhardt Institute of Molecular Biology RAS, Vavilov str. 32, Moscow, 119991, Russia
| | - M G Vinokurov
- Institute of Cell Biophysics RAS, PSCBR RAS, Puschino, 142290, Russia
| | - L N Chuvakova
- Engelhardt Institute of Molecular Biology RAS, Vavilov str. 32, Moscow, 119991, Russia
| | - A P Rezvykh
- Engelhardt Institute of Molecular Biology RAS, Vavilov str. 32, Moscow, 119991, Russia.,Moscow Institute of Physics and Technology, Dolgoprudny, 141701, Russia
| | - S Y Funikov
- Engelhardt Institute of Molecular Biology RAS, Vavilov str. 32, Moscow, 119991, Russia
| | - A V Morozov
- Engelhardt Institute of Molecular Biology RAS, Vavilov str. 32, Moscow, 119991, Russia
| | - M B Evgen'ev
- Engelhardt Institute of Molecular Biology RAS, Vavilov str. 32, Moscow, 119991, Russia.
| |
Collapse
|
3
|
Cherezov RO, Vorontsova YE, Mertsalov IB, Kulikova DA, Simonova OB. The influence of hairpin RNA against lawc, on the expression of overlapping genes of the lawc/Trf2 complex in D. melanogaster. BIOL BULL+ 2013. [DOI: 10.1134/s1062359013020040] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
|
4
|
Cherezov RO, Vorontsova IE, Mertsalov IB, Kulikova DA, Simonova OB. [Influence of hairpin RNA, specific to the gene lawc, on expression of overlapping genes of the lawc/Trf2 complex in D. melanogaster]. Izv Akad Nauk Ser Biol 2013:133-137. [PMID: 23789418] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 06/02/2023]
Abstract
We used a genetic system of the gene complex leg-arista-wing complex/TBP related factor 2 (lawc/Trf2) as a suitable model for in vivo study of operational characteristics of divergent overlapping genes. We established lines of transgenic fruit flies carrying constructs capable of expressing hairpin RNA directed at post-transcriptional suppression of the mRNA gene lawc by way of RNA-interference. The attempt to artificially suppress lawc-transcripts caused a rise in the level of expression of the gene lawc by several times. It is shown that change in the concentration of lawc-transcripts can affect the concentration of Trf2 transcripts. Possible mechanisms of regulation of expression of the overlapping genes studied are discussed.
Collapse
|
5
|
|
6
|
Abstract
A family of closely related genes, named the d4 family, has been previously identified in mammals. It comprises three genes encoding structurally related proteins. The hallmark of the family is d4 domain--a double-paired finger motifthat consists of two tandemly arranged PHD finger domains. These genes are expressed in various tissues and at various developmental stages. Two of those, neuro-d4 and cer-d4, are strictly neurospecific and their expression is developmentally regulated. Another gene, ubi-d4/Requiem is ubiquitously expressed in all embryonic and adult tissues at the same levels. d4 family genes are evolutionary conserved. Human, mouse, rat, and chicken d4 genes have been cloned. The only d4-like gene was found in the genome of nematode C. elegans. The sole member of d4 family was identified also in the genome of D. melanogaster. However, d4 genes are not believed to be present in the genomes of prokaryotes and yeast. This review describes genomic organization and expression ofd4family genes in different organisms.
Collapse
|
7
|
Mertsalov IB, Ninkina NN, Wanless JS, Buchman VL, Korochkin LI, Kulikova DA. Generation of mutant mice with targeted disruption of two members of the d4 gene family: neuro-d4 and cer-d4. DOKL BIOCHEM BIOPHYS 2008; 419:65-8. [PMID: 18505159 DOI: 10.1134/s1607672908020051] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Affiliation(s)
- I B Mertsalov
- Kol'tsov Institute of Developmental Biology, Russian Academy of Sciences, ul. Vavilova 26, Moscow, 117334 Russia
| | | | | | | | | | | |
Collapse
|
8
|
Simonova OB, Kulikova DA, Mertsalov IB, Umnova ON, Bashkirov VN, Bukhman VL, Korochkin LI. [Overexpression of a novel gene toothrin in Drosophila]. Genetika 2005; 41:196-202. [PMID: 15810609] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
A newly found locus of the Drosophila melanogaster genome, named toothrin (tth) has been used to study the role of the conserved domain 2/3 of genes from the d4 family. In contrast to the 2/3 domain of all vertebrates studied (including humans), which is always accompanied by the d4 domain, the tth gene contains the sequence encoding the 2/3 domain but lacks that encoding the d4 domain. The tth gene overexpression has been studied using the two-component system UAS-GAL4. It has been demonstrated that the tth overexpression at the third-instar larval (prepupal) stage decreases survival rate, simultaneously causing a substantial deceleration of development in Drosophila. It is known that the change of developmental stages in Drosophila is controlled by the rates of the expression of ecdysteroid and juvenile hormones (JHs). It is supposed that the overexpression of the tth gene causes either a shift in the ecdysterone-to-JH ratio (through a decreased JH decay rate or a delayed initiation of ecdysone synthesis) or a deceleration of the release of ecdysterones synthesized.
Collapse
|
9
|
Ninkina NN, Mertsalov IB, Kulikova DA, Alimova-Kost MV, Simonova OB, Korochkin LI, Kiselev SL, Buchman VL. Cerd4, third member of the d4 gene family: expression and organization of genomic locus. Mamm Genome 2001; 12:862-6. [PMID: 11845289 DOI: 10.1007/s00335-001-3039-1] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2001] [Accepted: 06/26/2001] [Indexed: 02/07/2023]
Abstract
Two members of the d4 family of presumptive transcription modulators, neuro-d4 (Neud4) and ubi-d4/Requiem (Req), have been characterized previously. We cloned and characterized the third member of this gene family, cer-d4 (Cerd4), from chicken and mouse cDNA libraries. The expression patterns of Cerd4 gene in both species are similar and more restricted than expression patterns of other two d4 genes. The main sites of Cerd4 expression are retina and cerebellum, where multiple transcripts could be detected. Two major types of Cerd4 proteins are a full-length isoform possessing all domains characteristic to the d4 family and truncated XZ isoform without C-terminal tandem of PHD fingers. The developmental kinetics of expression of these isoforms is different. The intron/exon structure of human Cerd4 gene is similar to that of neuro-d4 and ubi-d4/Requiem genes, but most introns of Cerd4 gene are much larger than the corresponding introns of the other two genes.
Collapse
Affiliation(s)
- N N Ninkina
- Department of Preclinical Veterinary Sciences, University of Edinburgh, Summerhall, Edinburgh, EH9 1QH, Scotland, UK
| | | | | | | | | | | | | | | |
Collapse
|
10
|
Mertsalov IB, Kulikova DA, Ninkina NN, Simonova OB, Buchman VL, Korochkin LI. [Genomic organization of the murine neuro-d4 gene]. Genetika 2000; 36:314-317. [PMID: 10779904] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
As the first step toward obtaining the null mutation or knock out of the neuro-d4 gene, we isolated phages containing fragments of the gene from a mouse genomic library. The nucleotide sequence of a region of the gene more than 10 kb in size was determined.
Collapse
Affiliation(s)
- I B Mertsalov
- Institute of Gene Biology, Russian Academy of Sciences, Moscow, Russia
| | | | | | | | | | | |
Collapse
|
11
|
Mertsalov IB, Kulikova DA, Alimova-Kost MV, Ninkina NN, Korochkin LI, Buchman VL. Structure and expression of two members of the d4 gene family in mouse. Mamm Genome 2000; 11:72-4. [PMID: 10602997 DOI: 10.1007/s003350010014] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
Affiliation(s)
- I B Mertsalov
- Institute of Gene Biology, Russian Academy of Sciences, 34/6, Vavilov Street, Moscow B-334, Russia
| | | | | | | | | | | |
Collapse
|
12
|
Kulikova DA, Mertsalov IB, Ninkina NN, Simonova OB, Bukhman VL, Korochkin LI. Genomic organization of the mouse ubi-d4/requiem gene. Dokl Biol Sci 2000; 370:84-7. [PMID: 10781338] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 02/16/2023]
Affiliation(s)
- D A Kulikova
- Kol'tsov Institute of Developmental Biology, Russian Academy of Sciences, Moscow, Russia
| | | | | | | | | | | |
Collapse
|
13
|
Kulikova DA, Veretennikov NA, Fedorov AA, Shchedrin AM, Korochkin LI. [Morphometric identification of immunohistochemically stained mammalian brain glial cells]. Dokl Akad Nauk 1995; 342:265-268. [PMID: 7633354] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 05/21/2023]
|
14
|
Kulikova DA, Veretennikov NA, Bryksina ZG, Krivitskaia GN, Fedorov AA, Shchedrin AM, Korochkin LI. [Comparative morphometric analysis of neuroglial cells]. Dokl Akad Nauk 1995; 341:558-560. [PMID: 7787784] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 05/22/2023]
|
15
|
Moiseev IK, Zemtsova MN, Trakhtenberg PL, Kulikova DA, Skobkina IP, Neshchadim GN, Ostapchuk NV. Synthesis and antimicrobial activity of 4-substituted 2-cycloalkylquinolines. Pharm Chem J 1988. [DOI: 10.1007/bf00771640] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
|
16
|
Zolotareva GN, Berezovskaya IV, Zaprometov MN, Revazova YA, Rudzit ÉA, Faddeeva IN, Akaeva ÉA, Bratslavskii VA, Girich AF, Kinzirskii AS, Koverova GR, Kulikova DA, Chernikova OP, Radkevich TP. Influence of the complex of catechins from tea leaves on the appearance of genetic and chemotherapeutic properties of the antibacterial drug dioxidine. Pharm Chem J 1983. [DOI: 10.1007/bf00765208] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
|
17
|
Rudzit EA, Ermachenko VA, Neshchadim GN, Kulikova DA, Dzhemukhadze GK. [Comparison of the antimicrobial properties of catamin AB and rockal and their action on bacterial membrane systems]. Antibiotiki 1981; 26:847-52. [PMID: 7325617] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
Abstract
The antimicrobial properties of two cationic detergents, i.e. rockal, an antiseptic made in England and catamine AB, its analog made in the USSR were compared. It was found that catamine AB and rockal did not practically differ by their bacteriostatic and mycostatic activities with respect to collection and clinical strains of bacteria with multiple resistance to antibiotics. Both detergents were shown to be identical by their membranotropic activity and thus catamine AB may be used instead of rockal as an antiseptic.
Collapse
|
18
|
Tsurkan AA, Popova ZI, Kulikova DA. The nitrogen coupling of aromatic amines with 2-arylidenhydrazino-4-phenylselenazoles and 2-arylidenhydrazino-4-phenylthiazoles and their antimicrobial activity. Pharm Chem J 1979. [DOI: 10.1007/bf00778091] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
|
19
|
Rudzit EA, Iakovlev VP, Zinchenko TA, Kulikova DA, Lisitsa LI. [Comparative experimental study of cyclacillin and ampicillin]. Antibiotiki 1979; 24:331-6. [PMID: 375825] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
Cyclacillin was compared with ampicillin by its bacteriostatic efficiency in vitro, chemotherapeutic efficiency in experimental infections of mice and rats and pharmacokinetic characteristics. It was found that cyclacillin was not superior to ampicillin by its antibacterial action. By a number of characteristics it was even significantly inferior. The pharmacokinetic advantages of cyclacillin were not considered significant.
Collapse
|
20
|
Rudzit EA, Kulikova DA. [Secretion of drugs into the renal tubules (review of the literature)]. Farmakol Toksikol 1977; 40:101-5. [PMID: 323039] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
|
21
|
Iakovlev VP, Kulikova DA, Rudzit EA. [Pharmacokinetic interference between chemotherapeutic and pharmacological preparations]. Antibiotiki 1976; 21:945-54. [PMID: 793509] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
|
22
|
Stulin NV, Lipkin AE, Kulikova DA, Rudzim ÉA. Synthesis and antimicrobial activity of certain 2-(1-naphthyl)-thiophene derivatives. Pharm Chem J 1975. [DOI: 10.1007/bf00773291] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
|
23
|
Rudzit EA, Ermachenko VA, Kulikova DA. [Mechanism of the prolonged effect of diuretics on penicillin circulation in the body]. Izv Akad Nauk SSSR Biol 1975:203-8. [PMID: 1133240] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
|
24
|
Kholodov LE, Merzlyakova NM, Rudzit EA, Kulikova DA. Quinidines. Pharm Chem J 1975. [DOI: 10.1007/bf00780146] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
|
25
|
Rudzit EA, Pleshakov MG, Radkevich TP, Kulikova DA, Avidon VV. [Clomethacillin. Synthesis and antibacterial properties]. Antibiotiki 1974; 19:887-90. [PMID: 4218940] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
|
26
|
Kulikova DA, Rudzit EA. [The influence of several diuretics on penicillin circulation in the bodies of rats]. Antibiotiki 1974; 19:157-60. [PMID: 4219123] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
|
27
|
Rudzit EA, Kulikova DA. [The effect of horse serum on bacterial sensitivity to penicillins]. Zh Mikrobiol Epidemiol Immunobiol 1974:113-5. [PMID: 4218022] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
|
28
|
Kulikova DA, Radkevich TP, Rudzit EA. [Comparative study of the antimicrobial activity of semisynthetic penicillins in vitro]. Antibiotiki 1973; 18:835-9. [PMID: 4761956] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
|
29
|
Kulikova DA, Rudzit EA. [Furosemide action on penicillin distribution in experimental animals]. Antibiotiki 1972; 17:259-63. [PMID: 5030779] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
|