Machine Learning-Based Clinical Prediction Models for Acute Ischemic Stroke Based on Serum Xanthine Oxidase Levels

OBJECTIVE

Early prediction of the onset, progression and prognosis of acute ischemic stroke (AIS) is helpful for treatment decision-making and proactive management. Although several biomarkers have been found to predict the progression and prognosis of AIS, these biomarkers have not been widely used in routine clinical practice. Xanthine oxidase (XO) is a form of xanthine oxidoreductase (XOR), which is widespread in various organs of the human body and plays an important role in redox reactions and ischemia‒reperfusion injury. Our previous studies have shown that serum XO levels on admission have certain clinical predictive value for AIS. The purpose of this study was to utilize serum XO levels and clinical data to establish machine learning models for predicting the onset, progression, and prognosis of AIS.

METHODS

We enrolled 328 consecutive patients with AIS and 107 healthy controls from October 2020 to September 2021. Serum XO levels and stroke-related clinical data were collected. We established 5 machine learning models-the logistic regression (LR), support vector machine (SVM), decision tree, random forest, and K-nearest neighbor (KNN) models-to predict the onset, progression, and prognosis of AIS. The area under the receiver operating characteristic curve (AUROC), accuracy, sensitivity, specificity, negative predictive value, and positive predictive value were used to evaluate the predictive performance of each model.

RESULTS

Among the 5 machine learning models predicting AIS onset, the AUROC values of 4 prediction models were over 0.7, while that of the KNN model was lower (AUROC = 0.6708, 95% CI 0.576-0.765). The LR model showed the best AUROC value (AUROC = 0.9586, 95% CI 0.927-0.991). Although the 5 machine learning models showed relatively poor predictive value for the progression of AIS (all AUROCs <0.7), the LR model still showed the highest AUROC value (AUROC = 0.6543, 95% CI 0.453-0.856). We compared the value of 5 machine learning models in predicting the prognosis of AIS, and the LR model showed the best predictive value (AUROC = 0.8124, 95% CI 0.715-0.910).

CONCLUSIONS

The tested machine learning models based on serum levels of XO could predict the onset and prognosis of AIS. Among the 5 machine learning models, we found that the LR model showed the best predictive performance. Machine learning algorithms improve accuracy in the early diagnosis of AIS and can be used to make treatment decisions.

Evolution of water quality in rainwater harvesting systems during long-term storage in non-rainy seasons

The development of rainwater utilization strategies has relied on rainwater harvesting (RWH) systems for centuries to alleviate the pressure on water resources. However, there are still significant knowledge gaps regarding the changes in water quality in RWH systems during long-term storage in non-rainy seasons. This study evaluated the water quality processes in RWH systems through static rainwater storage experiments for approximately 60 days. The results revealed that nutrients in rainwater accumulated in sediment during storage. Disturbance and redox conditions at the rainwater-sediment interface contribute to the release of sedimentary facies materials. The rainwater showed distinct DO stratification, with the biochemical reactions of sedimentary facies being the primary factor driving oxygen consumption. ORP and turbidity showed positive correlations with COD (r = 0.582; 0.572), TOC (r = 0.678; 0.681), TN (r = 0.452; 0.439), and NH4+-N (r = 0.502; 0.553) (P < 0.05). The regulation of water quality and extension of the usage cycle were identified as critical factors influenced by DO. In addition, bacteria share similar ecological niche preferences. These findings provide scientific evidence for the high-quality reuse of rainwater in decentralized RWH systems during long-term storage in non-rainy seasons.

The interplay between associated proteins, redox state and Ca2+ in the intraluminal ER compartment regulates the IP3 receptor

There have been in the last three decades repeated publications indicating that the inositol 1,4,5-trisphosphate receptor (IP3R) is regulated not only by cytosolic Ca2+ but also by intraluminal Ca2+. Although most studies indicated that a decreasing intraluminal Ca2+ level led to an inhibition of the IP3R, a number of publications reported exactly the opposite effect, i.e. an inhibition of the IP3R by high intraluminal Ca2+ levels. Although intraluminal Ca2+-binding sites on the IP3Rs were reported, a regulatory role for them was not demonstrated. It is also well known that the IP3R is regulated by a vast array of associated proteins, but only relatively recently proteins were identified that can be linked to the regulation of the IP3R by intraluminal Ca2+. The first to be reported was annexin A1 that is proposed to associate with the second intraluminal loop of the IP3R at high intraluminal Ca2+ levels and to inhibit the IP3R. More recently, ERdj5/PDIA19 reductase was described to reduce an intraluminal disulfide bridge of IP3R1 only at low intraluminal Ca2+ levels and thereby to inhibit the IP3R. Annexin A1 and ERdj5/PDIA19 can therefore explain most of the experimental results on the regulation of the IP3R by intraluminal Ca2+. Further studies are needed to provide a fuller understanding of the regulation of the IP3R from the intraluminal side. These findings underscore the importance of the state of the endoplasmic reticulum in the control of IP3R activity.

Release of arsenic during riverbank filtration under anoxic conditions linked to grain size of riverbed sediments

Geogenic arsenic contamination of groundwater poses a health threat to millions of people worldwide, particularly in Asia. Riverbank filtration (RBF) is a pre-treatment technique that aims to improve surface water quality through natural processes during water infiltration before abstraction. A study in Hanoi, Vietnam is presented, where the water quality of 48 RBF wells from 5 large well fields located in the Pleistocene aquifer along the Red River was analyzed. >80 % of the wells had arsenic concentrations above the WHO limit of 10 μg/l. The riverbed sediment and riverbed pore-water from 23 sites along a stretch of 30 km of the Red River near the well fields was also analyzed. Muddy riverbeds were found to be a hotspot for arsenic release. Already at a 30 cm depth from the riverbed sediment surface, the pore-water at many sites had high concentrations of arsenic (>100 μg/l). Arsenic concentrations in the pore-water of sites where mud lenses were present in the riverbed were significantly higher compared to sites with sandy riverbeds. At well fields along stretches of the Red River where riverbed was mostly muddy, higher arsenic concentrations were found than at well fields where the riverbed was mostly sandy. This indicates that river muds deposition and river morphology can influence arsenic concentrations in the aquifer in Hanoi and potentially other RBF sites in regions with geogenic arsenic contamination. At the end, recommendations regarding site selection of new potential RBF wells in affected regions is given.

Hydrogeochemical changes during artificial groundwater well recharge

Artificial groundwater recharge is a relatively economic and efficient method for solving shortages and uneven spatial-temporal distribution of water resources. Changes in groundwater quality during the recharge process are a key issue that must be addressed. Identifying the hydrogeochemical reactions that occur during recharge can be vital in predicting trends in groundwater quality. However, there are few studies on the evolution of groundwater quality during artificial recharge that comprehensively consider environmental, chemical, organic matter, and microbiological indicators. Based on an artificial groundwater recharge experiment in Xiong'an New Area, this study investigated the hydrogeochemical changes during groundwater recharge through a well. The results indicate that (1) as large amounts of recharge water (RW) were injected, the groundwater level initially rose rapidly, then fluctuated slowly, and finally rose again. (2) Water quality indicators, dissolved organic matter (DOM), and microbial communities were influenced by the mixture of RW and the background groundwater before recharge (BGBR), as well as by water-rock interactions, such as mineral dissolution-precipitation and redox reactions. (3) During well recharge, aerobic respiration, nitrification, denitrification, high-valence manganese (Mn) and iron (Fe) minerals reduction dissolution, and Mn2+ and Fe2+ oxidation-precipitation occurred sequentially. (4) DOM analysis showed that protein-like substances in the BGBR were the main carbon sources for aerobic respiration and denitrification, while humic-like substances carried by the RW significantly enhanced Mn and Fe minerals reduction dissolution. Therefore, RW quality significantly affects groundwater quality after artificial groundwater well recharge. Controlling indicators, such as dissolved oxygen (DO) and DOM, in the RW can effectively reduce harm to groundwater quality after recharge. This study is of theoretical and practical significance for in-depth analysis of the evolution of groundwater quality during artificial well recharge, prediction of trends in groundwater quality during and after recharge and ensuring groundwater quality safety.

Oxidoreductases and metal cofactors in the functioning of the earth

Life sustains itself using energy generated by thermodynamic disequilibria, commonly existing as redox disequilibria. Metals are significant players in controlling redox reactions, as they are essential components of the engine that life uses to tap into the thermodynamic disequilibria necessary for metabolism. The number of proteins that evolved to catalyze redox reactions is extraordinary, as is the diversification level of metal cofactors and catalytic domain structures involved. Notwithstanding the importance of the topic, the relationship between metals and the redox reactions they are involved in has been poorly explored. This work reviews the structure and function of different prokaryotic organometallic-protein complexes, highlighting their pivotal role in controlling biogeochemistry. We focus on a specific subset of metal-containing oxidoreductases (EC1 or EC7.1), which are directly involved in biogeochemical cycles, i.e., at least one substrate or product is a small inorganic molecule that is or can be exchanged with the environment. Based on these inclusion criteria, we select and report 59 metalloenzymes, describing the organometallic structure of their active sites, the redox reactions in which they are involved, and their biogeochemical roles.

The impact of early pregnancy metabolic disorders on pregnancy outcome and the specific mechanism

Miscarriage is the most common complication of pregnancy. The most common causes of early miscarriage are chromosomal abnormalities of the embryo, maternal endocrine abnormalities, organ malformations, and abnormal immune factors. Late miscarriages are mostly caused by factors such as cervical insufficiency. However, the causes of 50% of miscarriages remain unknown. Recently, increasing attention has been given to the role of metabolic abnormalities in miscarriage. In this review, we mainly discuss the roles of four major metabolic pathways (glucose, lipid, and amino acid metabolism, and oxidation‒reduction balance) in miscarriage and the metabolism-related genes that lead to metabolic disorders in miscarriage. Depending on aetiology, the current treatments for miscarriage include hormonal and immunological drugs, as well as surgery, while there are few therapies for metabolism. Therefore, we also summarize the drugs for metabolism-related targets. The study of altered metabolism underlying miscarriage not only helps us to understand the mechanisms involved in miscarriage but also provides an important basis for clinical research on new therapies.

A viable mechanism to form boron-bearing diamonds in deep Earth

Boron is considered extremely depleted inside Earth's mantle. It is therefore a great challenge to elucidate the prevalence of boron impurity seen in sublithospheric diamonds, especially in identifying the boron source and the mechanism for its incorporation into these enigmatic diamonds. Here, we unveil a pathway for the crystallization of boron-bearing diamonds via redox reactions of carbonates and borides at pressure-temperature conditions relevant to the Earth's lower mantle. We present computational results along with pertinent experimental evidence for a genesis of boron-bearing diamonds via the redox reaction of CaCO₃ and FeB at 22.5 GPa and 2100 K, corresponding to the geological conditions at the top of the lower mantle. The present findings offer a viable mechanism for the formation of boron-bearing diamonds deep inside the Earth's mantle.

Fabrication of 3D graphene anode for improving performance of miniaturized microbial fuel cells

A three-dimensional graphene (3D GR) grown by chemical vapor deposition method was used as the anode of a miniaturized microbial fuel cell (mini-MFC), which was to be embedded in a 56-μL anode chamber for the formation of a thicker biofilm from Shewanella bacterial culture to promote high efficient extracellular electron transfer. Such 3D GR structure had fewer defects with few layers, and the framework showed significant high REDOX peak current density, high charge storage and low charge transfer resistance. Besides, the electron transport rate of 3D GR electrode was 0.0176 s-1, which was about two times faster than that of GR electrode with nickel foam substrate (GR/NF). Benefiting from the macroporous networks, high electron transfer rate and electrocatalytic activity, 3D GR anode facilitated efficient mass transfer and effective electron transport, further forming denser biofilm on the 3D GR. The maximum output voltage and power density of this mini-MFC were 820 mV and 23.8 mW/m2, which were much higher than those of the GR/NF anode at 590 mV and 12.8 mW/m2 and the bare NF anode at 450 mV and 4.6 mW/m2. The study demonstrated that 3D GR can be a promising anode material for improving MFC performance.

Tracing sources and transformations of ammonium during river bank filtration by means of column experiments

Ammonium is an undesirable substance in the abstracted water of riverbank filtration (RBF) schemes, due mainly to the complications it causes during post-treatment (e. g. during chlorination). During RBF, ammonium can be formed in the riverbed by mineralization of organic nitrogen. Column experiments with riverbed sediments and river water from the Elbe were performed to evaluate the controls on ammonium concentrations during riverbed infiltration. Concentrations of ammonium went from <0.1 mgN/l in the feed water up to 1 mgN/l in the columns effluent. Higher temperatures and lower infiltration rates led to increased ammonium concentrations in the effluent. This shows higher susceptibility to ammonium increases of RBF settings in warmer climates and points to potential threats of climate change to water quality at RBF sites. In the later phases of the experiments, after the columns have been flushed their pore volumes several times, ammonium concentrations continually decreased. This behavior was attributed to the partial consumption of easily degradable organic material in the sediments, leading to lesser reducing conditions and lower mineralization rates. Based on operation with varied nitrate concentrations (0-11 mgN/l) and ¹⁵N isotopic measurements, dissimilatory nitrate reduction to ammonium (DNRA) was not shown to be relevant in the formation of ammonium. Anaerobic ammonium oxidation (anammox), however, was hypothesized to be an important sink of ammonium inside the columns, which indicates that rivers with high nitrate concentrations, such as the Elbe, may have a buffer of protection against ammonium formation during RBF.

Influence of Fe(III) source, light quality, photon flux and presence of oxygen on photoreduction of Fe(III)-organic complexes - Implications for light-influenced coastal freshwater and marine sediments

Iron(III) photoreduction is an important source of Fe(II) in illuminated aquatic and sedimentary environments. Under oxic conditions, the Fe(II) can be re-oxidized by oxygen (O₂) forming reactive O-species such as hydrogen peroxide (H₂O₂) which further react with Fe(II) thus enhancing Fe(II) oxidation rates. However, it is unknown by aquatic sediments how the parameters wavelength of radiation, photon flux, origin of Fe(III) source and presence or absence of O₂ influence the extent of Fe(II) and H₂O₂ turnover. We studied this using batch experiments with different Fe(III)-organic complexes mimicking sedimentary conditions. We found that wavelengths <500 nm are necessary to initiate Fe(III) photoreduction and that the photon flux, wavelength and identity of Fe(III)-complexing organic acids control the kinetics of Fe(III) photoreduction. The formation of photo-susceptible Fe(III)-organic complexes did not depend on whether the Fe(III) source was biogenically produced, poorly-crystalline Fe(III) oxyhydroxides or chemically synthesized ferrihydrite. Oxic conditions caused chemical re-oxidation of Fe(II) and accumulation of H₂O₂. The photon flux, wavelength and availability of Fe(III)-complexing organic molecules are critical for the balance between concurrent Fe(III) photoreduction and abiotic Fe(II) oxidation and may even lead to a steady-state concentration of Fe(II) in the micromolar range. These results help understand and predict Fe(III) photoreduction dynamics and in-situ formation of Fe(II) in oxic or anoxic, illuminated and organic-rich environments.

Review on the interactions of arsenic, iron (oxy)(hydr)oxides, and dissolved organic matter in soils, sediments, and groundwater in a ternary system

High concentrations of arsenic (As) in groundwater threaten the environment and public health. Geogenically, groundwater As contamination predominantly occurs via its mobilization from underground As-rich sediments. In an aquatic ecosystem, As is typically driven by several underlying processes, such as redox transitions, microbially driven reduction of iron (Fe) oxide minerals, and release of associated As. Notably, dissolved As mobilized from soils and sediments exhibits high affinity for dissolved organic matter (DOM). Thus, high DOM concentrations can increase As mobility. Therefore, it is crucial to understand the complex interactions and biogeochemical cycling of As, DOM, and Fe oxides. This review collates knowledge regarding the fate of As in multicomponent As-DOM-Fe systems, including ternary complexes involving both Fe and DOM. Additionally, the release mechanisms of As from sediments into groundwater in the presence of both Fe and DOM have been discussed. The mechanisms of As mobilization/sorption at the solid-water interface can be affected by negatively charged DOM competing for sorption sites with As on Fe (oxy)(hydr)oxides and may be further modified by other anionic ubiquitous species such as phosphate, silicic acid, or sulfur. This review emphasizes the need for a comprehensive understanding of the impact of DOM, Fe oxides, and related biogeochemical processes on As mobilization to aquifers. The review identifies important knowledge gaps that may aid in developing applicable practices for preventing the spread of As contamination in aquatic resources and traditional soil management practices.

Anaerobic oxidation of arsenite by bioreduced nontronite

The redox state of arsenic controls its toxicity and mobility in the subsurface environment. Understanding the redox reactions of arsenic is particularly important for addressing its environmental behavior. Clay minerals are commonly found in soils and sediments, which are an important host for arsenic. However, limited information is known about the redox reactions between arsenic and structural Fe in clay minerals. In this study, the redox reactions between As(III)/As(V) and structural Fe in nontronite NAu-2 were investigated in anaerobic batch experiments. No oxidation of As(III) was observed by the native Fe(III)-NAu-2. Interestingly, anaerobic oxidation of As(III) to As(V) occurred after Fe(III)-NAu-2 was bioreduced. Furthermore, anaerobic oxidization of As(III) by bioreduced NAu-2 was significantly promoted by increasing Fe(III)-NAu-2 reduction extent and initial As(III) concentrations. Bioreduction of Fe(III)-NAu-2 generated reactive Fe(III)-O-Fe(II) moieties at clay mineral edge sites. Anaerobic oxidation of As(III) was attributed to the strong oxidation activity of the structural Fe(III) within the Fe(III)-O-Fe(II) moieties. Our results provide a potential explanation for the presence of As(V) in the anaerobic subsurface environment. Our findings also highlight that clay minerals can play an important role in controlling the redox state of arsenic in the natural environment.

Deciphering the effects of CeO2 nanoparticles on Escherichia coli in the presence of ferrous and sulfide ions: Physicochemical transformation-induced toxicity and detoxification mechanisms

The physicochemical transformations as well as the redox reaction-induced toxicity changes of ceria nanoparticles (CeO₂ NPs) in reducing conditions is extremely lacking. Herein, the behaviors, chemical modifications and toxicity of CeO₂ NPs in the presence of reduction-active ions (namely Fe²⁺ and S^2-) were investigated, with a particular emphasis on the cytotoxicity mechanism associated with their physicochemical transformations. The presence of Fe²⁺ and S^2- differently altered the surface properties and toxicity of CeO₂ NPs. Redox reactions with Fe²⁺ led to form small aggregates, boosted the reduction of Ce^IVO₂ and enhanced dissolved Ce³⁺ concentration. Moreover, CeO₂ NPs possessed a high affinity for Escherichia coli (E. coli) and induced the generation of •OH abiotically after reaction with Fe²⁺, provoking serious disruption of cell membranes and causing high toxicity to E. coli. In contrast, the amending of S^2- protected E. coli from direct contact with CeO₂ NPs by creating new Ce₂S₃ precipitated on the surface, accelerating the aggregation of NPs and reducing the concentration of dissolved Ce³⁺. This study suggested that the chemical interactions between the reactive surfaces of CeO₂ and reduction-active ions highly determined the stability and cytotoxicity of CeO₂ NPs, which provides fundamental insights into the environmental risks of CeO₂ NPs.

Flavins in the electron bifurcation process

The discovery of a new energy-coupling mechanism termed flavin-based electron bifurcation (FBEB) in 2008 revealed a novel field of application for flavins in biology. The key component is the bifurcating flavin endowed with strongly inverted one-electron reduction potentials (FAD/FAD•^- ≪ FAD•^-/FADH^-) that cooperatively transfers in its reduced state one low and one high-energy electron into different directions and thereby drives an endergonic with an exergonic reduction reaction. As energy splitting at the bifurcating flavin apparently implicates one-electron chemistry, the FBEB machinery has to incorporate prior to and behind the central bifurcating flavin 2e-to-1e and 1e-to-2e switches, frequently also flavins, for oxidizing variable medium-potential two-electron donating substrates and for reducing high-potential two-electron accepting substrates. The one-electron carriers ferredoxin or flavodoxin serve as low-potential (high-energy) electron acceptors, which power endergonic processes almost exclusively in obligate anaerobic microorganisms to increase the efficiency of their energy metabolism. In this review, we outline the global organization of FBEB enzymes, the functions of the flavins therein and the surrounding of the isoalloxazine rings by which their reduction potentials are specifically adjusted in a finely tuned energy landscape.

Surface Properties and Environmental Transformations Controlling the Bioaccumulation and Toxicity of Cerium Oxide Nanoparticles: A Critical Review

Increasing production and utilization of cerium oxide nanoparticles (CNPs) in recent years have raised wide concerns about their toxicity. Numerous studies have been conducted to reveal the toxicity of CNPs, but the results are sometimes contradictory. In this review, the most important factors in mediating CNPs toxicity are discussed, including (1) the roles of physicochemical properties (size, morphology, agglomeration condition, surface charge, coating and surface valence state) on CNPs toxicity; (2) the phase transfer and transformation process of CNPs in various aqueous, terrestrial, and airborne environments; and (3) reductive dissolution of CNPs core and their chemical reactions with phosphate, sulfate/S^2-, and ferrous ions. The physicochemical properties play key roles in the interactions of CNPs with organisms and consequently their environmental transformations, reactivity and toxicity assessment. Also, the speciation transformations of CNPs caused by reactions with (in)organic ligands in both environmental and biological systems would further alter their fate, transport, and toxicity potential. Thus, the toxicity mechanisms are proposed based on the physical damage of direct adsorption of CNPs onto the cell membrane and chemical inhibition (including oxidative stress and interaction of CNPs with biomacromolecules). Finally, the current knowledge gaps and further research needs in identifying the toxicological risk factors of CNPs under realistic environmental conditions are highlighted, which might improve predictions about their potential environmental influences. This review aims to provide new insights into cost-effectiveness of control options and management practices to prevent environmental risks from CNPs exposure.

3,3'-Diselenodipropionic acid (DSePA): A redox active multifunctional molecule of biological relevance

BACKGROUND

Extensive research is being carried out globally to design and develop new selenium compounds for various biological applications such as antioxidants, radio-protectors, anti-carcinogenic agents, biocides, etc. In this pursuit, 3,3'-diselenodipropionic acid (DSePA), a synthetic organoselenium compound, has received considerable attention for its biological activities.

SCOPE OF REVIEW

This review intends to give a comprehensive account of research on DSePA so as to facilitate further research activities on this organoselenium compound and to realize its full potential in different areas of biological and pharmacological sciences.

MAJOR CONCLUSIONS

It is an interesting diselenide structurally related to selenocystine. It shows moderate glutathione peroxidase (GPx)-like activity and is an excellent scavenger of reactive oxygen species (ROS). Exposure to radiation, as envisaged during radiation therapy, has been associated with normal tissue side effects and also with the decrease in selenium levels in the body. In vitro and in vivo evaluation of DSePA has confirmed its ability to reduce radiation induced side effects into normal tissues. Administration of DSePA through intraperitoneal (IP) or oral route to mice in a dose range of 2 to 2.5 mg/kg body weight has shown survival advantage against whole body irradiation and a significant protection to lung tissue against thoracic irradiation. Pharmacokinetic profiling of DSePA suggests its maximum absorption in the lung.

GENERAL SIGNIFICANCE

Research work on DSePA reported in fifteen years or so indicates that it is a promising multifunctional organoselenium compound exhibiting many important activities of biological relevance apart from radioprotection.

Factors influencing the reduction of U(VI) by magnetite

Under suboxic and anoxic environments, magnetite is one corrosion product of iron being used in nuclear waste canisters. Previous studies have reported a complete reduction of U(VI) on the surfaces of biogenic and natural magnetite crystals, while incomplete reductions to U(V)/U(IV)-containing species have been observed on chemosynthetic magnetite. To date, the reasons behind such disparities remain poorly studied. This study shows that uranyl nitrate or uranyl acetate is mainly reduced to UO_2+x oxides (e.g., U₄O₉, U₃O₈, etc.) by chemosynthetic magnetite under acidic conditions. When extra zero valent-iron was added, the reaction rate was significantly increased, and an improved but still incomplete U(VI) reduction was observed. Nitrate and ferric ions are ubiquitous in natural environment. Results demonstrate that the nitrate ion associated with uranyl and the ferric ion contained in magnetite or generated from U(VI) reduction have a non-negligible oxidative effect on the final products, which could mainly account for the incomplete reduction of U(VI) by chemosynthetic magnetite in the absence or presence of extra zero valent-iron observed in this study. Furthermore, the surface loading of uranium in U-Fe systems can, in part, unravel the discrepancies in various observations. An enhanced understanding of the U-Fe reaction mechanism can facilitate predictions of the extent of uranium mobility with respect to nuclear waste disposal and radioactive decontamination.

Proton motive function of the terminal antiporter-like subunit in respiratory complex I

In the aerobic respiratory chains of many organisms, complex I functions as the first electron input. By reducing ubiquinone (Q) to ubiquinol, it catalyzes the translocation of protons across the membrane as far as ~200 Å from the site of redox reactions. Despite significant amount of structural and biochemical data, the details of redox coupled proton pumping in complex I are poorly understood. In particular, the proton transfer pathways are extremely difficult to characterize with the current structural and biochemical techniques. Here, we applied multiscale computational approaches to identify the proton transfer paths in the terminal antiporter-like subunit of complex I. Data from combined classical and quantum chemical simulations reveal for the first time structural elements that are exclusive to the subunit, and enables the enzyme to achieve coupling between the spatially separated Q redox reactions and proton pumping. By studying long time scale protonation and hydration dependent conformational dynamics of key amino acid residues, we provide novel insights into the proton pumping mechanism of complex I.

Participation of soil active components in the reduction of Cr(VI) by biochar: Differing effects of iron mineral alone and its combination with organic acid

Biochar as a soil amendment could be involved in redox process of elements which would be affected by soil-redox-active components including minerals and organic acids. This study evaluated the effects of Fe mineral and lactate on reducing capacity of biochar for Cr(VI) reduction and the underlying mechanisms. Fe minerals inhibited the reduction of Cr(VI) by biochar, with the decrease of Cr(VI) reduction rate constant obtained by pseudo first-order reaction model from 2.18 to 2.47 × 10^-2 h^-1 to 0.71-1.51 × 10^-2 h^-1. The decrease of reduction rate constant was because (1) the loss of electron donating moieties in biochar; and (2) inhibition of electron transfer between biochar and Cr(VI) due to surface coverage by biochar-Fe complex. However, the coexistence of Fe minerals with lactate enhanced the reduction of Cr(VI) by biochar, with the rate constant increasing from 2.58 to 3.05 × 10^-2 h^-1 to 2.91-27.2 × 10^-2 h^-1. The positive effect was also attributed to two reasons: (1) lactate can decrease the surface Fe-coverage of biochar through chelating process; (2) electron from lactate can be shuttled by Fe(II) and thus enhancing the Cr(VI) reduction. Our results revealed that different soil redox-active components could have varying effects on biochar amendment for Cr(VI) reduction, which should be further considered during the application of biochar.

Quantifying the Coupled Kinetic Reactions of Metals/Metalloids on Iron and Manganese Oxides

Quantifying the coupled kinetic reactions of metals/metalloids on iron and manganese oxides is essential for predicting the fate of contaminants in the environment. In this perspective, a few key issues related to developing the quantitative models for the coupled kinetic reactions of metal and metalloids are discussed, including adsorption/desorption processes, redox reactions, and mineral dissolution/transformation. Future research areas are also briefly discussed.

Interaction with low molecular weight organic acids affects the electron shuttling of biochar for Cr(VI) reduction

Biochar can act as "electron shuttle" in soil redox reactions. It is possible that biochar accepts the electrons from low molecular weight organic acids (LMWOAs) in soil and then transfer them to the acceptors, e.g., Cr(VI). This study evaluated the interaction between seven soil LMWOAs and peanut shell biochar (BC) as well as its effect on the electron shuttling of biochar for Cr(VI) reduction. Both redox reactions and sorption process occurred during the interaction of biochar and LMWOAs, which altered the contents of Cr(VI) reduction-relevant groups (i.e., CO and CO) on the surface of biochar. The redox reactions were more important to the electron transfer between biochar produced at 400℃ (BC400) and LMWOAs due to the repeated cycle of reduction-oxidation of surface functional groups. The reduction rate of Cr(VI) by LMWOAs mediated by BC400 was 1.10-7.09 × 10^-3 h^-1, among which tartaric acid had the best reduction efficiency due to its highest reducing capability. For biochar produced at 700℃ (BC700), the sorption process of LMWOAs was the key factor to the direct electron shuttling process through the conjugated structure of biochar. The reduction rate of Cr(VI) by LMWOAs mediated by BC700 was significantly higher and ranged 7.40-864 × 10^-3 h^-1, with the oxalic acid having the best reduction efficiency due to its highest sorption capacity by BC700. The results obtained from this study can help to establish the linkage between biochar and LMWOAs in soil electron network, which better explains the multifunctional roles of biochar during the redox processes such as Cr(VI) reduction in soil.

Engineered biochar composites with zeolite, silica, and nano-zerovalent iron for the efficient scavenging of chlortetracycline from aqueous solutions

Date palm waste-derived biochar (DBC) was produced through pyrolysis (600 °C) and modified with zeolite (Z-DBC), silica (S-DBC), or nano-zerovalent iron (nZVI-DBC) to design efficient sorbents. The pristine and engineered biochars were characterized by SEM, XRD, BET, TGA, CHNS-O, and FTIR to investigate the surface, structural, and mineralogical composition. The nZVI-DBC exhibited lowest pH (6.15) and highest surface area (220.92 m² g^-1), carbon (80.55%), nitrogen (3.78%), and hydrogen (11.09%) contents compared with other biochars. Isotherm sorption data for chlortetracycline (CTC) removal from aqueous solutions was described well by Langmuir and Redlich-Peterson isotherms showing the highest fitness (R² values in the range of 0.88-0.98 and 0.88-0.99, respectively). Langmuir predicted maximum CTC adsorption capacity was in order of nZVI-DBC (89.05 mg g^-1) > S-DBC (45.57 mg g^-1) > Z-DBC (30.42 mg g^-1) > DBC (28.19 mg g^-1). Kinetics adsorption data was best described by power function model (R² = 0.93-0.99), followed by interaparticle diffusion (R² = 0.85-0.96) model. The nZVI-DBC performed outclass by removing 98% of CTC, followed by S-DBC (68%), Z-DBC (35%), and DBC (36%). Chemisorption, H-bonding, and interaparticle diffusion were the operating mechanisms for CTC adsorption onto DBC, S-DBC, and Z-DBC, while π-π electron donor-accepter interactions and redox reactions augmented these mechanisms for highest CTC adsorption onto nZVI-DBC. Therefore, nZVI-DBC may serve as an efficient green technology for the removal of CTC from aqueous solutions and to reduce surface date palm waste pollution. Graphical abstract .

Antioxidants in the Fight Against Atherosclerosis: Is This a Dead End?

PURPOSE OF REVIEW

The purpose of this review is to focus on the outcome of recent antioxidant interventions using synthetic and naturally occurring molecules established as adjuvant strategies to lipid-lowering or anti-inflammatory therapies designed to reduce the risk of cardiovascular disease.

RECENT FINDINGS

To date, accumulated evidence regarding oxidation as a pro-atherogenic factor indicates that redox biochemical events involved in atherogenesis are indeed a very attractive target for the management of cardiovascular disease in the clinic. Nevertheless, although evidence indicates that redox reactions are important in the initiation and progression of atherosclerosis, oxidation with a pro-atherogenic context does not eliminate the fact that oxidation participates in many cases as an essential messenger of important cellular signaling pathways. Therefore, disease management and therapeutic goals require not only high-precision and high-sensitivity methods to detect in plasma very low amounts of reducing and oxidizing molecules but also a much better understanding of the normal processes and metabolic pathways influenced and/or controlled by oxidative stress. As several methodologies have been specifically described for the quantification of the total antioxidant capacity and the oxidation state of diverse biological systems, a successful way to carefully study how redox reactions influence atherosclerosis can be achieved. Since there is still a lack of standardization with many of these methods, clinical trials studying antioxidant capacity have been difficult to compare and therefore difficult to use in order to reach a conclusion. We believe a comprehensive analysis of new knowledge and its relationship with the presence of plasma antioxidants and their reducing capacity will undoubtedly open new ways to understand and develop new therapeutic pathways in the fight not only against atherosclerosis but also against other degenerative diseases.

Can nitrocobalamin be reduced by ascorbic acid to nitroxylcobalamin? Some surprising mechanistic findings

Despite detailed studies on nitroxylcobalamin (CblNO) formation, the possible intracellular generation of CblNO via reduction of nitrocobalamin (CblNO2) remains questionable. To study this further, spectroscopic studies on the reaction of CblNO2 with the intracellular antioxidant ascorbic acid (HAsc-) were performed in aqueous solution at pH < 5.0. It was found that nitroxylcobalamin is the final product of this interaction, which is not just a simple reaction but a rather complex chemical process. We clearly show that an excess of nitrite suppresses the formation of CblNO, from which it follows that ascorbic acid cannot reduce coordinated nitrite. We propose that under the influence of ascorbic acid, nitrocobalamin is reduced to Cbl(II) and nitric oxide (·NO), which can subsequently react rapidly to form CblNO. It was further shown that this system requires anaerobic conditions as a result of the rapid oxidation of both Cbl(II) and CblNO.

Difference in attenuation among Mn, As, and Fe in riverbed sediments

We report, for the first time, a detailed study at river water and hyporheic zone systems through collection and analyses of shallow sediments and selected source rocks, pore water, and river water from forty-two locations at the Chianan Plain (CP), SW Taiwan. The study was focused to understand the possible changes in the river water and sediment chemistry as a consequence of high arsenic (mean±SD=71.28±16.24μg/L, n=46) groundwater discharge to three major rivers in the plain. The study shows, except few locations, As concentration in river sediments corresponds to average As concentration in soil and upper crustal abundance and of source rock. Sequential extraction indicates that As is mostly bound to FeOOH. No enrichment of arsenic in river sediments or depletion of aqueous As and iron in pore water was observed down to the maximum sampling depth of 1.7m although manganese is enriched in sediments. Dissolved As concentrations in the river sediments are much lower compared to the hotspots in the CP aquifers. This suggests that no As attenuation processes are active or they cannot be detected in this zone. Mn precipitates at higher redox level compared to Fe and As and thus attenuates in the studied zone.

Balancing cellular redox metabolism in microbial electrosynthesis and electro fermentation - A chance for metabolic engineering

More and more microbes are discovered that are capable of extracellular electron transfer, a process in which they use external electrodes as electron donors or acceptors for metabolic reactions. This feature can be used to overcome cellular redox limitations and thus optimizing microbial production. The technologies, termed microbial electrosynthesis and electro-fermentation, have the potential to open novel bio-electro production platforms from sustainable energy and carbon sources. However, the performance of reported systems is currently limited by low electron transport rates between microbes and electrodes and our limited ability for targeted engineering of these systems due to remaining knowledge gaps about the underlying fundamental processes. Metabolic engineering offers many opportunities to optimize these processes, for instance by genetic engineering of pathways for electron transfer on the one hand and target product synthesis on the other hand. With this review, we summarize the status quo of knowledge and engineering attempts around chemical production in bio-electrochemical systems from a microbe perspective. Challenges associated with the introduction or enhancement of extracellular electron transfer capabilities into production hosts versus the engineering of target compound synthesis pathways in natural exoelectrogens are discussed. Recent advances of the research community in both directions are examined critically. Further, systems biology approaches, for instance using metabolic modelling, are examined for their potential to provide insight into fundamental processes and to identify targets for metabolic engineering.

Applications of biochar in redox-mediated reactions

Biochar is chemically more reduced and reactive than the original feedstock biomass. Graphite regions, functional groups, and redox-active metals in biochar contribute to its redox characteristics. While the functional groups such as phenolic species in biochar are the main electron donating moieties (i.e., reducers), the quinones and polycondensed aromatic functional groups are the components accepting electrons (oxidants). The redox capacity of biochar depends on feedstock properties and pyrolysis conditions. This paper aims to review and summarize the various synthesis techniques for biochars and the methods for probing their redox characteristics. We review the abiotic and microbial applications of biochars as electron donors, electron acceptors, or electron shuttles for pollutant degradation, metal(loid)s (im)mobilization, nutrient transformation, and discuss the underlying mechanisms. Furthermore, knowledge gaps that exist in the exploration and differentiation of the electron transfer mechanisms involving biochars are also identified.

Transport and potential attenuation of nitrogen in shallow groundwaters in the lower Rangitikei catchment, New Zealand

Intensive agricultural activities are generally associated with nitrogen leaching from agricultural soils, and this nitrogen has the potential to percolate and contaminate groundwater and surface waters. We assessed surface water and groundwater interactions, and nitrogen leaching and its potential attenuation in shallow groundwater in the lower Rangitikei River catchment (832km²), New Zealand. We combined regional- and local-scale field surveys and experiments, nutrient budget modelling, and hydraulic and geochemical methods, to gain an insight into leaching, transformation and transport of nitrogen via groundwaters to the river in the study area. Concurrent river flow gaugings (in January 2015) and a piezometric map, developed from measured depths to groundwater in 110 bores (in October 2014), suggest groundwater discharges to the Rangitikei River in the upper parts of the study area, while there is groundwater recharge near the coast. The groundwater redox characterisation, based on sampling and analysis of 15 mostly shallow bores (<30m below ground level (bgl)), suggests groundwater across the lower Rangitikei catchment in general is under anoxic/reduced conditions. The groundwater typically has low dissolved oxygen (DO) concentrations (<1mg/L), suggesting the subsurface environment is conducive to potential attenuation by 'denitrification' of NO₃-N in groundwater. We further measured NO₃-N attenuation in shallow groundwater piezometers (3-6mbgl) using single-well push-pull tests. We found generally low levels (<0.5mg/L) of NO₃-N in shallow groundwater piezometers (>5mbgl), despite being installed under intensive land uses, such as dairying and cropping. Our in-field push-pull tests showed NO₃-N reduction at four shallow groundwater piezometers, with the rates of reduction varying from 0.04mgNL^-1h^-1 to 1.57mgNL^-1h^-1. This highlights the importance of a sound understanding of not only the sources, but also transport and transformation, or fate, of nutrients leached from farms, to mitigate the likely impacts of land use on water quality and ecosystem health in agricultural catchments.

Comparison of the oxidation of carcinogenic aristolochic acid I and II by microsomal cytochromes P450 in vitro: experimental and theoretical approaches

Abstract

The herbal drug aristolochic acid, a natural mixture of 8-methoxy-6-nitrophenanthro[3,4-d]-1,3-dioxole-5-carboxylic acid (AAI) and 6-nitrophenanthro[3,4-d]-1,3-dioxole-5-carboxylic acid (AAII), is derived from Aristolochia species and is the cause of two nephropathies. Ingestion of aristolochic acid is associated with the development of urothelial tumors linked with aristolochic acid nephropathy and is implicated in the development of Balkan endemic nephropathy-associated urothelial tumors. The O-demethylated metabolite of AAI, 8-hydroxyaristolochic acid (AAIa), is the detoxification product of AAI generated by its oxidative metabolism. Whereas the formation of AAIa from AAI by cytochrome P450 (CYP) enzymes has been found in vitro and in vivo, this metabolite has not been found from AAII as yet. Therefore, the present study has been designed to compare the amenability of AAI and AAII to oxidation; experimental and theoretical approaches were used for such a study. In the case of experimental approaches, the enzyme (CYP)-mediated formation of AAIa from both carcinogens was investigated using CYP enzymes present in subcellular microsomal fractions and recombinant CYP enzymes. We found that in contrast to AAI, AAII is oxidized only by several CYP enzymatic systems and their efficiency is much lower for oxidation of AAII than AAI. Using the theoretical approaches, such as flexible in silico docking methods and ab initio calculations, contribution to explanation of these differences was established. Indeed, the results found by both used approaches determined the reasons why AAI is better oxidized than AAII; the key factor causing the differences in AAI and AAII oxidation is their different amenability to chemical oxidation.

Graphical abstract

Comparative studies of reaction of cobalamin (II) and cobinamide (II) with sulfur dioxide

The kinetics of reactions of cobalamin (II) and cobinamide (II) with sulfur dioxide was studied by UV-visible (UV-vis) spectroscopy. Reaction results in oxidation of Co(II) center and involves two aquated SO₂ moieties. The final product is suggested to be complex Co(III)-S₂O ₄^•- . The absence of corrin ring modifications during the reactions was proved.

Organic matter interactions with natural manganese oxide and synthetic birnessite

Redox reactions of inorganic and organic contaminants on manganese oxides have been widely studied. However, these reactions are strongly affected by the presence of natural organic matter (NOM) at the surface of the manganese oxide. Interestingly, the mechanism behind NOM adsorption onto manganese oxides remains unclear. Therefore, in this study, the adsorption kinetics and equilibrium of different NOM isolates to synthetic manganese oxide (birnessite) and natural manganese oxide (Mn sand) were investigated. Natural manganese oxide is composed of both amorphous and well-crystallised Mn phases (i.e., lithiophorite, birnessite, and cryptomelane). NOM adsorption on both manganese oxides increased with decreasing pH (from pH7 to 5), in agreement with surface complexation and ligand exchange mechanisms. The presence of calcium enhanced the rate of NOM adsorption by decreasing the electrostatic repulsion between NOM and Mn sand. Also, the adsorption was limited by the diffusion of NOM macromolecules through the Mn sand pores. At equilibrium, a preferential adsorption of high molecular weight molecules enriched in aromatic moieties was observed for both the synthetic and natural manganese oxide. Hydrophobic interactions may explain the adsorption of organic matter on manganese oxides. The formation of low molecular weight UV absorbing molecules was detected with the synthetic birnessite, suggesting oxidation and reduction processes occurring during NOM adsorption. This study provides a deep insight for both environmental and engineered systems to better understand the impact of NOM adsorption on the biogeochemical cycle of manganese.

Bias-induced conductance switching in single molecule junctions containing a redox-active transition metal complex

ABSTRACT

The paper provides a comprehensive theoretical description of electron transport through transition metal complexes in single molecule junctions, where the main focus is on an analysis of the structural parameters responsible for bias-induced conductance switching as found in recent experiments, where an interpretation was provided by our simulations. The switching could be theoretically explained by a two-channel model combining coherent electron transport and electron hopping, where the underlying mechanism could be identified as a charging of the molecule in the junction made possible by the presence of a localized electronic state on the transition metal center. In this article, we present a framework for the description of an electron hopping-based switching process within the semi-classical Marcus-Hush theory, where all relevant quantities are calculated on the basis of density functional theory (DFT). Additionally, structural aspects of the junction and their respective importance for the occurrence of irreversible switching are discussed.

GRAPHICAL ABSTRACT

Insight into the kinetics and thermodynamics of the hydride transfer reactions between quinones and lumiflavin: a density functional theory study

The kinetics and equilibrium of the hydride transfer reaction between lumiflavin and a number of substituted quinones was studied using density functional theory. The impact of electron withdrawing/donating substituents on the redox potentials of quinones was studied. In addition, the role of these substituents on the kinetics of the hydride transfer reaction with lumiflavin was investigated in detail under the transition state (TS) theory assumption. The hydride transfer reactions were found to be more favorable for an electron-withdrawing substituent. The activation barrier exhibited a quadratic relationship with the driving force of these reactions as derived under the formalism of modified Marcus theory. The present study found a significant extent of electron delocalization in the TS that is stabilized by enhanced electrostatic, polarization, and exchange interactions. Analysis of geometry, bond-orders, and energetics revealed a predominant parallel (Leffler-Hammond) effect on the TS. Closer scrutiny reveals that electron-withdrawing substituents, although located on the acceptor ring, reduce the N-H bond order of the donor fragment in the precursor complex. Carried out in the gas-phase, this is the first ever report of a theoretical study of flavin's hydride transfer reactions with quinones, providing an unfiltered view of the electronic effect on the nuclear reorganization of donor-acceptor complexes.

Identification of the coupling step in Na(+)-translocating NADH:quinone oxidoreductase from real-time kinetics of electron transfer

Bacterial Na(+)-translocating NADH:quinone oxidoreductase (Na(+)-NQR) uses a unique set of prosthetic redox groups-two covalently bound FMN residues, a [2Fe-2S] cluster, FAD, riboflavin and a Cys4[Fe] center-to catalyze electron transfer from NADH to ubiquinone in a reaction coupled with Na(+) translocation across the membrane. Here we used an ultra-fast microfluidic stopped-flow instrument to determine rate constants and the difference spectra for the six consecutive reaction steps of Vibrio harveyi Na(+)-NQR reduction by NADH. The instrument, with a dead time of 0.25 ms and optical path length of 1 cm allowed collection of visible spectra in 50-μs intervals. By comparing the spectra of reaction steps with the spectra of known redox transitions of individual enzyme cofactors, we were able to identify the chemical nature of most intermediates and the sequence of electron transfer events. A previously unknown spectral transition was detected and assigned to the Cys4[Fe] center reduction. Electron transfer from the [2Fe-2S] cluster to the Cys4[Fe] center and all subsequent steps were markedly accelerated when Na(+) concentration was increased from 20 μM to 25 mM, suggesting coupling of the former step with tight Na(+) binding to or occlusion by the enzyme. An alternating access mechanism was proposed to explain electron transfer between subunits NqrF and NqrC. According to the proposed mechanism, the Cys4[Fe] center is alternatively exposed to either side of the membrane, allowing the [2Fe-2S] cluster of NqrF and the FMN residue of NqrC to alternatively approach the Cys4[Fe] center from different sides of the membrane.

The metabolomics of oxidative stress

Oxidative stress resulting from increased availability of reactive oxygen species (ROS) is a key component of many responses of plants to challenging environmental conditions. The consequences for plant metabolism are complex and manifold. We review data on small compounds involved in oxidative stress, including ROS themselves and antioxidants and redox buffers in the membrane and soluble phases, and we discuss the wider consequences for plant primary and secondary metabolism. While metabolomics has been exploited in many studies on stress, there have been relatively few non-targeted studies focused on how metabolite signatures respond specifically to oxidative stress. As part of the discussion, we present results and reanalyze published datasets on metabolite profiles in catalase-deficient plants, which can be considered to be model oxidative stress systems. We emphasize the roles of ROS-triggered changes in metabolites as potential oxidative signals, and discuss responses that might be useful as markers for oxidative stress. Particular attention is paid to lipid-derived compounds, the status of antioxidants and antioxidant breakdown products, altered metabolism of amino acids, and the roles of phytohormone pathways.

Haemoglobins of Mycobacteria: structural features and biological functions

The genus Mycobacterium is comprised of Gram-positive bacteria occupying a wide range of natural habitats and includes species that range from severe intracellular pathogens to economically useful and harmless microbes. The recent upsurge in the availability of microbial genome data has shown that genes encoding haemoglobin-like proteins are ubiquitous among Mycobacteria and that multiple haemoglobins (Hbs) of different classes may be present in pathogenic and non-pathogenic species. The occurrence of truncated haemoglobins (trHbs) and flavohaemoglobins (flavoHbs) showing distinct haem active site structures and ligand-binding properties suggests that these Hbs may be playing diverse functions in the cellular metabolism of Mycobacteria. TrHbs and flavoHbs from some of the severe human pathogens such as Mycobacterium tuberculosis and Mycobacterium leprae have been studied recently and their roles in effective detoxification of reactive nitrogen and oxygen species, electron cycling, modulation of redox state of the cell and facilitation of aerobic respiration have been proposed. This multiplicity in the function of Hbs may aid these pathogens to cope with various environmental stresses and survive during their intracellular regime. This chapter provides recent updates on genomic, structural and functional aspects of Mycobacterial Hbs to address their role in Mycobacteria.

Parvalbumin as a metal-dependent antioxidant

Parvalbumin (PA) is a Ca(2+)-binding protein of vertebrates massively expressed in tissues with high oxygen uptake and respectively elevated level of reactive oxygen species (ROS). To characterize antioxidant properties of PA, antioxidant capacity (AOC) of intact rat α-PA has been explored. ORAC, TEAC and hydrogen peroxide AOC assays evidence conformation-dependent oxidation of the PA. AOC value for the apo-PA 4-11-fold exceeds that for the Ca(2+)-loaded protein. Despite folded conformation of apo-PA, it has AOC equivalent to that of the proteolized protein. The most populated under resting conditions PA form, Mg(2+)-bound PA, has AOC similar to that of apo-PA. ROS-induced changes in absorption spectrum of PA evidence an oxidation of PA's phenylalanines in the ORAC assay. Sensitivity of PA oxidation to its conformation enabled characterization of its metal affinity and pH-dependent behavior: a transition with pKa of 7.6 has been revealed for the Ca(2+)-loaded PA. Since total AOC of PA under in vivo conditions may reach the level of reduced glutathione, we propose that PA might modulate intracellular redox equilibria and/or signaling in a calcium-dependent manner. We speculate that the oxidation-mediated damage of some of PA-GABAergic interneurons observed in schizophrenia is due to a decline in total AOC of the reduced glutathione-PA pair.

Complex resistivity signatures of ethanol biodegradation in porous media

Numerous adverse effects are associated with the accidental release of ethanol (EtOH) and its persistence in the subsurface. Geophysical techniques may permit non-invasive, real time monitoring of microbial degradation of hydrocarbon. We performed complex resistivity (CR) measurements in conjunction with geochemical data analysis on three microbial-stimulated and two control columns to investigate changes in electrical properties during EtOH biodegradation processes in porous media. A Debye Decomposition approach was applied to determine the chargeability (m), normalized chargeability (m(n)) and time constant (τ) of the polarization magnitude and relaxation length scale as a function of time. The CR responses showed a clear distinction between the bioaugmented and control columns in terms of real (σ') and imaginary (σ″) conductivity, phase (ϕ) and apparent formation factor (F(app)). Unlike the control columns, a substantial decrease in σ' and increase in F(app) occurred at an early time (within 4 days) of the experiment for all three bioaugmented columns. The observed decrease in σ' is opposite to previous studies on hydrocarbon biodegradation. These columns also exhibited increases in ϕ (up to ~9 mrad) and σ″ (up to two order of magnitude higher) 5 weeks after microbial inoculation. Variations in m and m(n) were consistent with temporal changes in ϕ and σ″ responses, respectively. Temporal geochemical changes and high resolution scanning electron microscopy imaging corroborated the CR findings, thus indicating the sensitivity of CR measurements to EtOH biodegradation processes. Our results offer insight into the potential application of CR measurements for long-term monitoring of biogeochemical and mineralogical changes during intrinsic and induced EtOH biodegradation in the subsurface.