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For: Loew LM, Schaff JC. The Virtual Cell: a software environment for computational cell biology. Trends Biotechnol 2001;19:401-6. [PMID: 11587765 DOI: 10.1016/s0167-7799(01)01740-1] [Citation(s) in RCA: 202] [Impact Index Per Article: 8.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
Number Cited by Other Article(s)
151
Nielsen PF, Halstead MD. The evolution of CellML. CONFERENCE PROCEEDINGS : ... ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL CONFERENCE 2007;2004:5411-4. [PMID: 17271569 DOI: 10.1109/iembs.2004.1404512] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
152
Geyer T, Lauck F, Helms V. Molecular stochastic simulations of chromatophore vesicles from Rhodobacter sphaeroides. J Biotechnol 2007;129:212-28. [PMID: 17276535 DOI: 10.1016/j.jbiotec.2006.12.018] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2006] [Revised: 12/11/2006] [Accepted: 12/22/2006] [Indexed: 10/23/2022]
153
Zhao T, Murphy RF. Automated learning of generative models for subcellular location: Building blocks for systems biology. Cytometry A 2007;71:978-90. [DOI: 10.1002/cyto.a.20487] [Citation(s) in RCA: 65] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
154
Tournier AL, Fitzjohn PW, Bates PA. Probability-based model of protein-protein interactions on biological timescales. Algorithms Mol Biol 2006;1:25. [PMID: 17156482 PMCID: PMC1781080 DOI: 10.1186/1748-7188-1-25] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2006] [Accepted: 12/11/2006] [Indexed: 12/03/2022]  Open
155
Cell modeling with reusable agent-based formalisms. APPL INTELL 2006. [DOI: 10.1007/s10489-006-6937-9] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
156
Vass MT, Shaffer CA, Ramakrishnan N, Watson LT, Tyson JJ. The JigCell model builder: a spreadsheet interface for creating biochemical reaction network models. IEEE/ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS 2006;3:155-64. [PMID: 17048401 DOI: 10.1109/tcbb.2006.27] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/12/2023]
157
Lee DY, Yun C, Cho A, Hou BK, Park S, Lee SY. WebCell: a web-based environment for kinetic modeling and dynamic simulation of cellular networks. Bioinformatics 2006;22:1150-1. [PMID: 16543278 DOI: 10.1093/bioinformatics/btl091] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
158
Weinstein H. Hallucinogen actions on 5-HT receptors reveal distinct mechanisms of activation and signaling by G protein-coupled receptors. AAPS JOURNAL 2006;7:E871-84. [PMID: 16594640 PMCID: PMC2750957 DOI: 10.1208/aapsj070485] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
159
Breitling R, Hoeller D. Current challenges in quantitative modeling of epidermal growth factor signaling. FEBS Lett 2005;579:6289-94. [PMID: 16288752 DOI: 10.1016/j.febslet.2005.10.034] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2005] [Revised: 10/18/2005] [Accepted: 10/18/2005] [Indexed: 10/25/2022]
160
Component-based software architecture for biosystem reverse engineering. BIOTECHNOL BIOPROC E 2005. [DOI: 10.1007/bf02989822] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
161
Soula H, Robardet C, Perrin F, Gripon S, Beslon G, Gandrillon O. Modeling the emergence of multi-protein dynamic structures by principles of self-organization through the use of 3DSpi, a multi-agent-based software. BMC Bioinformatics 2005;6:228. [PMID: 16171521 PMCID: PMC1242347 DOI: 10.1186/1471-2105-6-228] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/24/2005] [Accepted: 09/19/2005] [Indexed: 12/02/2022]  Open
162
Ramsey S, Orrell D, Bolouri H. Dizzy: stochastic simulation of large-scale genetic regulatory networks. J Bioinform Comput Biol 2005;3:415-36. [PMID: 15852513 DOI: 10.1142/s0219720005001132] [Citation(s) in RCA: 126] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2004] [Revised: 09/22/2004] [Accepted: 10/23/2004] [Indexed: 11/18/2022]
163
Plimpton SJ, Slepoy A. Microbial cell modeling via reacting diffusive particles. ACTA ACUST UNITED AC 2005. [DOI: 10.1088/1742-6596/16/1/042] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
164
Ma’ayan A, Blitzer RD, Iyengar R. Toward predictive models of mammalian cells. ACTA ACUST UNITED AC 2005;34:319-49. [PMID: 15869393 PMCID: PMC3035045 DOI: 10.1146/annurev.biophys.34.040204.144415] [Citation(s) in RCA: 60] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
165
Sarai N, Matsuoka S, Noma A. simBio: a Java package for the development of detailed cell models. PROGRESS IN BIOPHYSICS AND MOLECULAR BIOLOGY 2005;90:360-77. [PMID: 15987655 DOI: 10.1016/j.pbiomolbio.2005.05.008] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
166
Moraru II, Loew LM. Intracellular Signaling: Spatial and Temporal Control. Physiology (Bethesda) 2005;20:169-79. [PMID: 15888574 DOI: 10.1152/physiol.00052.2004] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]  Open
167
Tong W. Analyzing the biology on the system level. GENOMICS PROTEOMICS & BIOINFORMATICS 2005;2:6-14. [PMID: 15629038 PMCID: PMC5172474 DOI: 10.1016/s1672-0229(04)02002-9] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
168
Riddick G, Macara IG. A systems analysis of importin-{alpha}-{beta} mediated nuclear protein import. J Cell Biol 2005;168:1027-38. [PMID: 15795315 PMCID: PMC2171841 DOI: 10.1083/jcb.200409024] [Citation(s) in RCA: 96] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/07/2004] [Accepted: 02/16/2005] [Indexed: 11/22/2022]  Open
169
Emonet T, Macal CM, North MJ, Wickersham CE, Cluzel P. AgentCell: a digital single-cell assay for bacterial chemotaxis. Bioinformatics 2005;21:2714-21. [PMID: 15774553 DOI: 10.1093/bioinformatics/bti391] [Citation(s) in RCA: 70] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]  Open
170
Lukas TJ. A signal transduction pathway model prototype II: Application to Ca2+-calmodulin signaling and myosin light chain phosphorylation. Biophys J 2005;87:1417-25. [PMID: 15345524 PMCID: PMC1304550 DOI: 10.1529/biophysj.104.042721] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
171
Mayya V, Loew LM. STAT module can function as a biphasic amplitude filter. ACTA ACUST UNITED AC 2005;2:43-52. [PMID: 17091582 DOI: 10.1049/sb:20045037] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
172
Webb K, White T. UML as a cell and biochemistry modeling language. Biosystems 2005;80:283-302. [PMID: 15888343 DOI: 10.1016/j.biosystems.2004.12.003] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/21/2003] [Revised: 12/06/2004] [Accepted: 12/26/2004] [Indexed: 11/23/2022]
173
Aloy P, Russell RB. Structure-based systems biology: a zoom lens for the cell. FEBS Lett 2005;579:1854-8. [PMID: 15763563 DOI: 10.1016/j.febslet.2005.02.014] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2005] [Revised: 02/08/2005] [Accepted: 02/08/2005] [Indexed: 10/25/2022]
174
Missan S, McDonald TF. CESE. ACTA ACUST UNITED AC 2005;4:155-6. [PMID: 16128619 DOI: 10.2165/00822942-200504020-00011] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
175
Boissel JP, Cucherat M, Nony P, Dronne MA, Kassaï B, Chabaud S. Modélisation numérique et simulation : nouvelles applications en pharmacologie. Therapie 2005;60:1-15. [PMID: 15929468 DOI: 10.2515/therapie:2005001] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
176
VICE: A VIrtual CEll. COMPUTATIONAL METHODS IN SYSTEMS BIOLOGY 2005. [DOI: 10.1007/978-3-540-25974-9_16] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
177
Modeling of cell signaling pathways in macrophages by semantic networks. BMC Bioinformatics 2004;5:156. [PMID: 15494071 PMCID: PMC528732 DOI: 10.1186/1471-2105-5-156] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/13/2004] [Accepted: 10/19/2004] [Indexed: 11/10/2022]  Open
178
Xia Y, Yu H, Jansen R, Seringhaus M, Baxter S, Greenbaum D, Zhao H, Gerstein M. Analyzing cellular biochemistry in terms of molecular networks. Annu Rev Biochem 2004;73:1051-87. [PMID: 15189167 DOI: 10.1146/annurev.biochem.73.011303.073950] [Citation(s) in RCA: 87] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
179
Ma L, Janetopoulos C, Yang L, Devreotes PN, Iglesias PA. Two complementary, local excitation, global inhibition mechanisms acting in parallel can explain the chemoattractant-induced regulation of PI(3,4,5)P3 response in dictyostelium cells. Biophys J 2004;87:3764-74. [PMID: 15465874 PMCID: PMC1304889 DOI: 10.1529/biophysj.104.045484] [Citation(s) in RCA: 112] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]  Open
180
Papin J, Subramaniam S. Bioinformatics and cellular signaling. Curr Opin Biotechnol 2004;15:78-81. [PMID: 15102471 DOI: 10.1016/j.copbio.2004.01.003] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
181
Sauro HM, Kholodenko BN. Quantitative analysis of signaling networks. PROGRESS IN BIOPHYSICS AND MOLECULAR BIOLOGY 2004;86:5-43. [PMID: 15261524 DOI: 10.1016/j.pbiomolbio.2004.03.002] [Citation(s) in RCA: 134] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
182
Ishii N, Robert M, Nakayama Y, Kanai A, Tomita M. Toward large-scale modeling of the microbial cell for computer simulation. J Biotechnol 2004;113:281-94. [PMID: 15380661 DOI: 10.1016/j.jbiotec.2004.04.038] [Citation(s) in RCA: 62] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2003] [Revised: 03/30/2004] [Accepted: 04/01/2004] [Indexed: 11/26/2022]
183
Lloyd CM, Halstead MDB, Nielsen PF. CellML: its future, present and past. PROGRESS IN BIOPHYSICS AND MOLECULAR BIOLOGY 2004;85:433-50. [PMID: 15142756 DOI: 10.1016/j.pbiomolbio.2004.01.004] [Citation(s) in RCA: 259] [Impact Index Per Article: 12.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
184
Li Z, Chan C. Integrating Gene Expression and Metabolic Profiles. J Biol Chem 2004;279:27124-37. [PMID: 15107427 DOI: 10.1074/jbc.m403494200] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]  Open
185
Allen NA, Calzone L, Chen KC, Ciliberto A, Ramakrishnan N, Shaffer CA, Sible JC, Tyson JJ, Vass MT, Watson LT, Zwolak JW. Modeling regulatory networks at Virginia Tech. OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY 2004;7:285-99. [PMID: 14583117 DOI: 10.1089/153623103322452404] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
186
Zhu H, Huang S, Dhar P. The next step in systems biology: simulating the temporospatial dynamics of molecular network. Bioessays 2004;26:68-72. [PMID: 14696042 DOI: 10.1002/bies.10383] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
187
Weitzke EL, Ortoleva PJ. Simulating cellular dynamics through a coupled transcription, translation, metabolic model. Comput Biol Chem 2004;27:469-80. [PMID: 14642755 DOI: 10.1016/j.compbiolchem.2003.08.002] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
188
Kutscher B, Devreotes P, Iglesias PA. Local Excitation, Global Inhibition Mechanism for Gradient Sensing: An Interactive Applet. Sci Signal 2004;2004:pl3. [PMID: 14872096 DOI: 10.1126/stke.2192004pl3] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
189
Shenhav B, Lancet D. Prospects of a computational origin of life endeavor. ORIGINS LIFE EVOL B 2004;34:181-94. [PMID: 14979655 DOI: 10.1023/b:orig.0000009839.53483.42] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
190
Cho S, Park SG, Lee DH, Park BC. Protein-protein Interaction Networks: from Interactions to Networks. BMB Rep 2004;37:45-52. [PMID: 14761302 DOI: 10.5483/bmbrep.2004.37.1.045] [Citation(s) in RCA: 36] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
191
Shannon P, Markiel A, Ozier O, Baliga NS, Wang JT, Ramage D, Amin N, Schwikowski B, Ideker T. Cytoscape: a software environment for integrated models of biomolecular interaction networks. Genome Res 2004;13:2498-504. [PMID: 14597658 PMCID: PMC403769 DOI: 10.1101/gr.1239303] [Citation(s) in RCA: 32890] [Impact Index Per Article: 1566.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
192
Elcock AH. Molecular simulations of diffusion and association in multimacromolecular systems. Methods Enzymol 2004;383:166-98. [PMID: 15063651 DOI: 10.1016/s0076-6879(04)83008-8] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
193
Sayyed-Ahmad A, Tuncay K, Ortoleva PJ. Toward Automated Cell Model Development through Information Theory. J Phys Chem A 2003;107:10554-10565. [PMID: 38790153 DOI: 10.1021/jp0302921] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
194
Werner E. In silico multicellular systems biology and minimal genomes. Drug Discov Today 2003;8:1121-7. [PMID: 14678738 DOI: 10.1016/s1359-6446(03)02918-0] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
195
Fridlyand LE, Tamarina N, Philipson LH. Modeling of Ca2+ flux in pancreatic beta-cells: role of the plasma membrane and intracellular stores. Am J Physiol Endocrinol Metab 2003;285:E138-54. [PMID: 12644446 DOI: 10.1152/ajpendo.00194.2002] [Citation(s) in RCA: 88] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
196
Xu C, Watras J, Loew LM. Kinetic analysis of receptor-activated phosphoinositide turnover. J Cell Biol 2003;161:779-91. [PMID: 12771127 PMCID: PMC2199375 DOI: 10.1083/jcb.200301070] [Citation(s) in RCA: 155] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]  Open
197
Price ND, Papin JA, Schilling CH, Palsson BO. Genome-scale microbial in silico models: the constraints-based approach. Trends Biotechnol 2003;21:162-9. [PMID: 12679064 DOI: 10.1016/s0167-7799(03)00030-1] [Citation(s) in RCA: 254] [Impact Index Per Article: 11.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
198
Bhalla US. Understanding complex signaling networks through models and metaphors. PROGRESS IN BIOPHYSICS AND MOLECULAR BIOLOGY 2003;81:45-65. [PMID: 12475569 DOI: 10.1016/s0079-6107(02)00046-9] [Citation(s) in RCA: 50] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
199
Gilman A, Arkin AP. Genetic "code": representations and dynamical models of genetic components and networks. Annu Rev Genomics Hum Genet 2002;3:341-69. [PMID: 12142360 DOI: 10.1146/annurev.genom.3.030502.111004] [Citation(s) in RCA: 48] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
200
Neves SR, Iyengar R. Modeling of signaling networks. Bioessays 2002;24:1110-7. [PMID: 12447976 DOI: 10.1002/bies.1154] [Citation(s) in RCA: 76] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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