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The role of chloroplasts in plant pathology. Essays Biochem 2018; 62:21-39. [PMID: 29273582 DOI: 10.1042/ebc20170020] [Citation(s) in RCA: 32] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2017] [Revised: 11/22/2017] [Accepted: 11/28/2017] [Indexed: 12/13/2022]
Abstract
Plants have evolved complex tolerance systems to survive abiotic and biotic stresses. Central to these programmes is a sophisticated conversation of signals between the chloroplast and the nucleus. In this review, we examine the antagonism between abiotic stress tolerance (AST) and immunity: we propose that to generate immunogenic signals, plants must disable AST systems, in particular those that manage reactive oxygen species (ROS), while the pathogen seeks to reactivate or enhance those systems to achieve virulence. By boosting host systems of AST, pathogens trick the plant into suppressing chloroplast immunogenic signals and steer the host into making an inappropriate immune response. Pathogens disrupt chloroplast function, both transcriptionally-by secreting effectors that alter host gene expression by interacting with defence-related kinase cascades, with transcription factors, or with promoters themselves-and post-transcriptionally, by delivering effectors that enter the chloroplast or alter the localization of host proteins to change chloroplast activities. These mechanisms reconfigure the chloroplast proteome and chloroplast-originating immunogenic signals in order to promote infection.
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202
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Yamamoto T, Yoshida Y, Nakajima K, Tominaga M, Gyohda A, Suzuki H, Okamoto T, Nishimura T, Yokotani N, Minami E, Nishizawa Y, Miyamoto K, Yamane H, Okada K, Koshiba T. Expression of RSOsPR10 in rice roots is antagonistically regulated by jasmonate/ethylene and salicylic acid via the activator OsERF87 and the repressor OsWRKY76, respectively. PLANT DIRECT 2018; 2:e00049. [PMID: 31245715 PMCID: PMC6508531 DOI: 10.1002/pld3.49] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/19/2017] [Revised: 01/29/2018] [Accepted: 02/28/2018] [Indexed: 05/08/2023]
Abstract
Plant roots play important roles in absorbing water and nutrients, and in tolerance against environmental stresses. Previously, we identified a rice root-specific pathogenesis-related protein (RSOsPR10) induced by drought, salt, and wounding. RSOsPR10 expression is strongly induced by jasmonate (JA)/ethylene (ET), but suppressed by salicylic acid (SA). Here, we analyzed the promoter activity of RSOsPR10. Analyses of transgenic rice lines harboring different-length promoter::β-glucuronidase (GUS) constructs showed that the 3-kb promoter region is indispensable for JA/ET induction, SA repression, and root-specific expression. In the JA-treated 3K-promoter::GUS line, GUS activity was mainly observed at lateral root primordia. Transient expression in roots using a dual luciferase (LUC) assay with different-length promoter::LUC constructs demonstrated that the novel transcription factor OsERF87 induced 3K-promoter::LUC expression through binding to GCC-cis elements. In contrast, the SA-inducible OsWRKY76 transcription factor strongly repressed the JA-inducible and OsERF87-dependent expression of RSOsPR10. RSOsPR10 was expressed at lower levels in OsWRKY76-overexpressing rice, but at higher levels in OsWRKY76-knockout rice, compared with wild type. These results show that two transcription factors, OsERF87 and OsWRKY76, antagonistically regulate RSOsPR10 expression through binding to the same promoter. This mechanism represents a fine-tuning system to sense the balance between JA/ET and SA signaling in plants under environmental stress.
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Affiliation(s)
- Takahiro Yamamoto
- Department of Biological SciencesTokyo Metropolitan UniversityHachioji‐shiTokyoJapan
| | - Yuri Yoshida
- Department of Biological SciencesTokyo Metropolitan UniversityHachioji‐shiTokyoJapan
- Biotechnology Research CenterThe University of TokyoBunkyo‐kuTokyoJapan
| | - Kazunari Nakajima
- Department of Biological SciencesTokyo Metropolitan UniversityHachioji‐shiTokyoJapan
| | - Makiko Tominaga
- Department of Biological SciencesTokyo Metropolitan UniversityHachioji‐shiTokyoJapan
| | - Atsuko Gyohda
- Department of Biological SciencesTokyo Metropolitan UniversityHachioji‐shiTokyoJapan
| | - Hiromi Suzuki
- Department of Biological SciencesTokyo Metropolitan UniversityHachioji‐shiTokyoJapan
| | - Takashi Okamoto
- Department of Biological SciencesTokyo Metropolitan UniversityHachioji‐shiTokyoJapan
| | - Takeshi Nishimura
- Institute of Agrobiological SciencesNational Agriculture and Food Research OrganizationTsukubaIbarakiJapan
- Bioagric SciNagoya UniversityNagoyaAichiJapan
| | - Naoki Yokotani
- Institute of Agrobiological SciencesNational Agriculture and Food Research OrganizationTsukubaIbarakiJapan
- Kazusa DNA Research InstituteKisarazuChibaJapan
| | - Eiichi Minami
- Institute of Agrobiological SciencesNational Agriculture and Food Research OrganizationTsukubaIbarakiJapan
| | - Yoko Nishizawa
- Institute of Agrobiological SciencesNational Agriculture and Food Research OrganizationTsukubaIbarakiJapan
| | - Koji Miyamoto
- Biotechnology Research CenterThe University of TokyoBunkyo‐kuTokyoJapan
- Department of BiosciencesTeikyo UniversityUtsunomiyaTochigiJapan
| | - Hisakazu Yamane
- Biotechnology Research CenterThe University of TokyoBunkyo‐kuTokyoJapan
- Department of BiosciencesTeikyo UniversityUtsunomiyaTochigiJapan
| | - Kazunori Okada
- Biotechnology Research CenterThe University of TokyoBunkyo‐kuTokyoJapan
| | - Tomokazu Koshiba
- Department of Biological SciencesTokyo Metropolitan UniversityHachioji‐shiTokyoJapan
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203
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Schillheim B, Jansen I, Baum S, Beesley A, Bolm C, Conrath U. Sulforaphane Modifies Histone H3, Unpacks Chromatin, and Primes Defense. PLANT PHYSIOLOGY 2018; 176:2395-2405. [PMID: 29288231 PMCID: PMC5841731 DOI: 10.1104/pp.17.00124] [Citation(s) in RCA: 33] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/02/2017] [Accepted: 12/22/2017] [Indexed: 05/10/2023]
Abstract
Modern crop production calls for agrochemicals that prime plants for enhanced defense. Reliable test systems for spotting priming-inducing chemistry, however, are rare. We developed an assay for the high-throughput search for compounds that prime microbial pattern-induced secretion of antimicrobial furanocoumarins (phytoalexins) in cultured parsley cells. The screen produced 1-isothiocyanato-4-methylsulfinylbutane (sulforaphane; SFN), a secondary metabolite in many crucifers, as a novel defense priming compound. While elucidating SFN's mode of action in defense priming, we found that in Arabidopsis (Arabidopsisthaliana) the isothiocyanate provokes covalent modification (K4me3, K9ac) of histone H3 in the promoter and promoter-proximal region of defense genes WRKY6 and PDF12, but not PR1 SFN-triggered H3K4me3 and H3K9ac coincide with chromatin unpacking in the WRKY6 and PDF12 regulatory regions, primed WRKY6 expression, unprimed PDF12 activation, and reduced susceptibility to downy mildew disease (Hyaloperonospora arabidopsidis). Because SFN also directly inhibits Harabidopsidis and other plant pathogens, the isothiocyanate is promising for the development of a plant protectant with a dual mode of action.
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Affiliation(s)
- Britta Schillheim
- Department of Biology, RWTH Aachen University, Aachen 52056, Germany
| | - Irina Jansen
- Department of Biology, RWTH Aachen University, Aachen 52056, Germany
| | - Stephani Baum
- Department of Biology, RWTH Aachen University, Aachen 52056, Germany
| | - Alexander Beesley
- Department of Biology, RWTH Aachen University, Aachen 52056, Germany
| | - Carsten Bolm
- Department of Chemistry, RWTH Aachen University, Aachen 52056, Germany
| | - Uwe Conrath
- Department of Biology, RWTH Aachen University, Aachen 52056, Germany
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204
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Overmyer K, Vuorinen K, Brosché M. Interaction points in plant stress signaling pathways. PHYSIOLOGIA PLANTARUM 2018; 162:191-204. [PMID: 28857168 DOI: 10.1111/ppl.12639] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/28/2017] [Revised: 08/23/2017] [Accepted: 08/24/2017] [Indexed: 05/29/2023]
Abstract
Plants live in a world where they are challenged by abiotic and biotic stresses. In response to unfavorable conditions or an acute challenge like a pathogen attack, plants use various signaling pathways that regulate expression of defense genes and other mechanisms to provide resistance or stress adaptation. Identification of the regulatory steps in defense signaling has seen much progress in recent years. Many of the identified signaling pathways show interactions with each other, exemplified by the modulation of the jasmonic acid response by salicylic acid. Accordingly, defense regulation is more appropriately thought of as a web of interactions, rather than linear pathways. Here we describe various regulatory components and how they interact to provide an appropriate defense response. One of the common assays to monitor the output of defense signaling, as well as interaction between signaling pathways, is the measurement of altered gene expression. We illustrate that, while this is a suitable assay to monitor defense regulation, it can also inadvertently provide overstated conclusions about interaction among signaling pathways.
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Affiliation(s)
- Kirk Overmyer
- Division of Plant Biology, Department of Biosciences, Viikki Plant Science Centre, University of Helsinki, P.O. Box 65 (Viikinkaari 1), FI-00014, Helsinki, Finland
| | - Katariina Vuorinen
- Division of Plant Biology, Department of Biosciences, Viikki Plant Science Centre, University of Helsinki, P.O. Box 65 (Viikinkaari 1), FI-00014, Helsinki, Finland
| | - Mikael Brosché
- Division of Plant Biology, Department of Biosciences, Viikki Plant Science Centre, University of Helsinki, P.O. Box 65 (Viikinkaari 1), FI-00014, Helsinki, Finland
- Institute of Technology, University of Tartu, Nooruse 1, 50411, Tartu, Estonia
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205
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Hu TH, Lung SC, Ye ZW, Chye ML. Depletion of Arabidopsis ACYL-COA-BINDING PROTEIN3 Affects Fatty Acid Composition in the Phloem. FRONTIERS IN PLANT SCIENCE 2018; 9:2. [PMID: 29422909 PMCID: PMC5789640 DOI: 10.3389/fpls.2018.00002] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/09/2017] [Accepted: 01/03/2018] [Indexed: 05/05/2023]
Abstract
Oxylipins are crucial components in plant wound responses that are mobilised via the plant vasculature. Previous studies have shown that the overexpression of an Arabidopsis acyl-CoA-binding protein, AtACBP3, led to an accumulation of oxylipin-containing galactolipids, and AtACBP3pro::BETA-GLUCURONIDASE (GUS) was expressed in the phloem of transgenic Arabidopsis. To investigate the role of AtACBP3 in the phloem, reverse transcription-polymerase chain reaction and western blot analysis of phloem exudates from the acbp3 mutant and wild type revealed that the AtACBP3 protein, but not its mRNA, was detected in the phloem sap. Furthermore, micrografting demonstrated that AtACBP3 expressed from the 35S promoter was translocated from shoot to root. Subsequently, AtACBP3 was localised to the companion cells, sieve elements and the apoplastic space of phloem tissue by immunogold electron microscopy using anti-AtACBP3 antibodies. AtACBP3pro::GUS was induced locally in Arabidopsis leaves upon wounding, and the expression of wound-responsive jasmonic acid marker genes (JASMONATE ZIM-DOMAIN10, VEGETATIVE STORAGE PROTEIN2, and LIPOXYGENASE2) increased more significantly in both locally wounded and systemic leaves of the wild type in comparison to acbp3 and AtACBP3-RNAi. Oxylipin-related fatty acid (FA) (C18:2-FA, C18:3-FA and methyl jasmonate) content was observed to be lower in acbp3 and AtACBP3-RNAi than wild-type phloem exudates using gas chromatography-mass spectrometry. Experiments using recombinant AtACBP3 in isothermal titration calorimetry analysis showed that medium- and long-chain acyl-CoA esters bind (His)6-AtACBP3 with KD values in the micromolar range. Taken together, these results suggest that AtACBP3 is likely to be a phloem-mobile protein that affects the FA pool and jasmonate content in the phloem, possibly by its binding to acyl-CoA esters.
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206
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Vahabi K, Reichelt M, Scholz SS, Furch ACU, Matsuo M, Johnson JM, Sherameti I, Gershenzon J, Oelmüller R. Alternaria Brassicae Induces Systemic Jasmonate Responses in Arabidopsis Which Travel to Neighboring Plants via a Piriformsopora Indica Hyphal Network and Activate Abscisic Acid Responses. FRONTIERS IN PLANT SCIENCE 2018; 9:626. [PMID: 29868082 PMCID: PMC5952412 DOI: 10.3389/fpls.2018.00626] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/04/2017] [Accepted: 04/20/2018] [Indexed: 05/20/2023]
Abstract
Stress information received by a particular local plant tissue is transferred to other tissues and neighboring plants, but how the information travels is not well understood. Application of Alternaria Brassicae spores to Arabidopsis leaves or roots stimulates local accumulation of jasmonic acid (JA), the expression of JA-responsive genes, as well as of NITRATE TRANSPORTER (NRT)2.5 and REDOX RESPONSIVE TRANSCRIPTION FACTOR1 (RRTF1). Infection information is systemically spread over the entire seedling and propagates radially from infected to non-infected leaves, axially from leaves to roots, and vice versa. The local and systemic NRT2.5 responses are reduced in the jar1 mutant, and the RRTF1 response in the rbohD mutant. Information about A. brassicae infection travels slowly to uninfected neighboring plants via a Piriformospora Indica hyphal network, where NRT2.5 and RRTF1 are up-regulated. The systemic A. brassicae-induced JA response in infected plants is converted to an abscisic acid (ABA) response in the neighboring plant where ABA and ABA-responsive genes are induced. We propose that the local threat information induced by A. brassicae infection is spread over the entire plant and transferred to neighboring plants via a P. indica hyphal network. The JA-specific response is converted to a general ABA-mediated stress response in the neighboring plant.
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Affiliation(s)
- Khabat Vahabi
- Department of Plant Physiology, Matthias Schleiden Institute of Genetics, Bioinformatics and Molecular Botany, Friedrich-Schiller-University Jena, Jena, Germany
| | - Michael Reichelt
- Department of Biochemistry, Max-Planck Institute for Chemical Ecology, Jena, Germany
| | - Sandra S. Scholz
- Department of Plant Physiology, Matthias Schleiden Institute of Genetics, Bioinformatics and Molecular Botany, Friedrich-Schiller-University Jena, Jena, Germany
| | - Alexandra C. U. Furch
- Department of Plant Physiology, Matthias Schleiden Institute of Genetics, Bioinformatics and Molecular Botany, Friedrich-Schiller-University Jena, Jena, Germany
| | - Mitsuhiro Matsuo
- Department of Plant Physiology, Matthias Schleiden Institute of Genetics, Bioinformatics and Molecular Botany, Friedrich-Schiller-University Jena, Jena, Germany
| | - Joy M. Johnson
- Department of Plant Physiology, Matthias Schleiden Institute of Genetics, Bioinformatics and Molecular Botany, Friedrich-Schiller-University Jena, Jena, Germany
| | - Irena Sherameti
- Department of Plant Physiology, Matthias Schleiden Institute of Genetics, Bioinformatics and Molecular Botany, Friedrich-Schiller-University Jena, Jena, Germany
| | - Jonathan Gershenzon
- Department of Biochemistry, Max-Planck Institute for Chemical Ecology, Jena, Germany
| | - Ralf Oelmüller
- Department of Plant Physiology, Matthias Schleiden Institute of Genetics, Bioinformatics and Molecular Botany, Friedrich-Schiller-University Jena, Jena, Germany
- *Correspondence: Ralf Oelmüller
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207
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Metabolism-mediated induction of zinc tolerance in Brassica rapa by Burkholderia cepacia CS2-1. J Microbiol 2017; 55:955-965. [PMID: 29214486 DOI: 10.1007/s12275-017-7305-7] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/27/2017] [Revised: 11/01/2017] [Accepted: 11/08/2017] [Indexed: 10/18/2022]
Abstract
Brassica rapa (Chinese cabbage) is an essential component of traditional Korean food. However, the crop is often subject to zinc (Zn+) toxicity from contaminated irrigation water, which, as a result, compromises plant growth and production, as well as the health of human consumers. The present study investigated the bioaccumulation of Zn+ by Burkholderia cepacia CS2-1 and its effect on the heavy metal tolerance of Chinese cabbage. Strain CS2-1 was identified and characterized on the basis of 16S rRNA sequences and phylogenetic analysis. The strain actively produced indole-3-acetic acid (3.08 ± 0.21 μg/ml) and was also able to produce siderophore, solubilize minerals, and tolerate various concentrations of Zn+. The heavy metal tolerance of B. rapa plants was enhanced by CS2-1 inoculation, as indicated by growth attributes, Zn+ uptake, amino acid synthesis, antioxidant levels, and endogenous hormone (ABA and SA) synthesis. Without inoculation, the application of Zn+ negatively affected the growth and physiology of B. rapa plants. However, CS2-1 inoculation improved plant growth, lowered Zn+ uptake, altered both amino acid regulation and levels of flavonoids and phenolics, and significantly decreased levels of superoxide dismutase, endogenous abscisic acid, and salicylic acid. These findings indicate that B. cepacia CS2-1 is suitable for bioremediation against Zn+-induced oxidative stress.
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208
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Wang Y, Hu Q, Wu Z, Wang H, Han S, Jin Y, Zhou J, Zhang Z, Jiang J, Shen Y, Shi H, Yang W. HISTONE DEACETYLASE 6 represses pathogen defence responses in Arabidopsis thaliana. PLANT, CELL & ENVIRONMENT 2017; 40:2972-2986. [PMID: 28770584 DOI: 10.1111/pce.13047] [Citation(s) in RCA: 37] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/05/2016] [Accepted: 07/23/2017] [Indexed: 05/18/2023]
Abstract
Plant defence mechanisms are suppressed in the absence of pathogen attack to prevent wasted energy and growth inhibition. However, how defence responses are repressed is not well understood. Histone deacetylase 6 (HDA6) is a negative regulator of gene expression, and its role in pathogen defence response in plants is not known. In this study, a novel allele of hda6 (designated as shi5) with spontaneous defence response was isolated from a forward genetics screening in Arabidopsis. The shi5 mutant exhibited increased resistance to hemibiotrophic bacterial pathogen Pst DC3000, constitutively activated expression of pathogen-responsive genes including PR1, PR2, etc. and increased histone acetylation levels at the promoters of most tested genes that were upregulated in shi5. In both wild type and shi5 plants, the expression and histone acetylation of these genes were upregulated by pathogen infection. HDA6 was found to bind to the promoters of these genes under both normal growth conditions and pathogen infection. Our research suggests that HDA6 is a general repressor of pathogen defence response and plays important roles in inhibiting and modulating the expression of pathogen-responsive genes in Arabidopsis.
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Affiliation(s)
- Yizhong Wang
- School of Life Sciences, Central China Normal University, Wuhan, 43009, Hubei, P.R. China
| | - Qin Hu
- School of Life Sciences, Central China Normal University, Wuhan, 43009, Hubei, P.R. China
| | - Zhenjiang Wu
- School of Life Sciences, Central China Normal University, Wuhan, 43009, Hubei, P.R. China
| | - Hui Wang
- Department of Chemistry and Biochemistry, Texas Tech University, Lubbock, TX, 79409, USA
| | - Shiming Han
- School of Life Sciences, Central China Normal University, Wuhan, 43009, Hubei, P.R. China
| | - Ye Jin
- School of Life Sciences, Central China Normal University, Wuhan, 43009, Hubei, P.R. China
| | - Jin Zhou
- School of Life Sciences, Central China Normal University, Wuhan, 43009, Hubei, P.R. China
| | - Zhengfeng Zhang
- School of Life Sciences, Central China Normal University, Wuhan, 43009, Hubei, P.R. China
| | - Jiafu Jiang
- Department of Chemistry and Biochemistry, Texas Tech University, Lubbock, TX, 79409, USA
| | - Yun Shen
- Department of Chemistry and Biochemistry, Texas Tech University, Lubbock, TX, 79409, USA
| | - Huazhong Shi
- School of Life Sciences, Central China Normal University, Wuhan, 43009, Hubei, P.R. China
- Department of Chemistry and Biochemistry, Texas Tech University, Lubbock, TX, 79409, USA
| | - Wannian Yang
- School of Life Sciences, Central China Normal University, Wuhan, 43009, Hubei, P.R. China
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209
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Girard IJ, Tong C, Becker MG, Mao X, Huang J, de Kievit T, Fernando WGD, Liu S, Belmonte MF. RNA sequencing of Brassica napus reveals cellular redox control of Sclerotinia infection. JOURNAL OF EXPERIMENTAL BOTANY 2017; 68:5079-5091. [PMID: 29036633 PMCID: PMC5853404 DOI: 10.1093/jxb/erx338] [Citation(s) in RCA: 50] [Impact Index Per Article: 7.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/16/2017] [Accepted: 09/14/2017] [Indexed: 05/12/2023]
Abstract
Brassica napus is one of the world's most valuable oilseeds and is under constant pressure by the necrotrophic fungal pathogen, Sclerotinia sclerotiorum, the causal agent of white stem rot. Despite our growing understanding of host pathogen interactions at the molecular level, we have yet to fully understand the biological processes and underlying gene regulatory networks responsible for determining disease outcomes. Using global RNA sequencing, we profiled gene activity at the first point of infection on the leaf surface 24 hours after pathogen exposure in susceptible (B. napus cv. Westar) and tolerant (B. napus cv. Zhongyou 821) plants. We identified a family of ethylene response factors that may contribute to host tolerance to S. sclerotiorum by activating genes associated with fungal recognition, subcellular organization, and redox homeostasis. Physiological investigation of redox homeostasis was further studied by quantifying cellular levels of the glutathione and ascorbate redox pathway and the cycling enzymes associated with host tolerance to S. sclerotiorum. Functional characterization of an Arabidopsis redox mutant challenged with the fungus provides compelling evidence into the role of the ascorbate-glutathione redox hub in the maintenance and enhancement of plant tolerance against fungal pathogens.
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Affiliation(s)
- Ian J Girard
- Department of Biological Sciences, University of Manitoba, Winnipeg, MB R3T 2N2, Canada
| | - Chaobo Tong
- Oil Crops Research Institute, Chinese Academy of Agricultural Sciences, The Key Laboratory of Biology and Genetic Improvement of Oil Crops, The Ministry of Agriculture, Wuhan 430062, Hubei, China
| | - Michael G Becker
- Department of Biological Sciences, University of Manitoba, Winnipeg, MB R3T 2N2, Canada
| | - Xingyu Mao
- Department of Biological Sciences, University of Manitoba, Winnipeg, MB R3T 2N2, Canada
| | - Junyan Huang
- Oil Crops Research Institute, Chinese Academy of Agricultural Sciences, The Key Laboratory of Biology and Genetic Improvement of Oil Crops, The Ministry of Agriculture, Wuhan 430062, Hubei, China
| | - Teresa de Kievit
- Department of Microbiology, University of Manitoba, Winnipeg, MB R3T 2N2, Canada
| | | | - Shengyi Liu
- Oil Crops Research Institute, Chinese Academy of Agricultural Sciences, The Key Laboratory of Biology and Genetic Improvement of Oil Crops, The Ministry of Agriculture, Wuhan 430062, Hubei, China
| | - Mark F Belmonte
- Department of Biological Sciences, University of Manitoba, Winnipeg, MB R3T 2N2, Canada
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210
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Zhang W, Corwin JA, Copeland D, Feusier J, Eshbaugh R, Chen F, Atwell S, Kliebenstein DJ. Plastic Transcriptomes Stabilize Immunity to Pathogen Diversity: The Jasmonic Acid and Salicylic Acid Networks within the Arabidopsis/ Botrytis Pathosystem. THE PLANT CELL 2017; 29:2727-2752. [PMID: 29042403 PMCID: PMC5728128 DOI: 10.1105/tpc.17.00348] [Citation(s) in RCA: 50] [Impact Index Per Article: 7.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/09/2017] [Revised: 09/22/2017] [Accepted: 10/13/2017] [Indexed: 05/20/2023]
Abstract
To respond to pathogen attack, selection and associated evolution has led to the creation of plant immune system that are a highly effective and inducible defense system. Central to this system are the plant defense hormones jasmonic acid (JA) and salicylic acid (SA) and crosstalk between the two, which may play an important role in defense responses to specific pathogens or even genotypes. Here, we used the Arabidopsis thaliana-Botrytis cinerea pathosystem to test how the host's defense system functions against genetic variation in a pathogen. We measured defense-related phenotypes and transcriptomic responses in Arabidopsis wild-type Col-0 and JA- and SA-signaling mutants, coi1-1 and npr1-1, individually challenged with 96 diverse B. cinerea isolates. Those data showed genetic variation in the pathogen influences on all components within the plant defense system at the transcriptional level. We identified four gene coexpression networks and two vectors of defense variation triggered by genetic variation in B. cinerea This showed that the JA and SA signaling pathways functioned to constrain/canalize the range of virulence in the pathogen population, but the underlying transcriptomic response was highly plastic. These data showed that plants utilize major defense hormone pathways to buffer disease resistance, but not the metabolic or transcriptional responses to genetic variation within a pathogen.
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Affiliation(s)
- Wei Zhang
- Department of Plant Sciences, University of California, Davis, California 95616
- National and Local Joint Engineering Laboratory for Energy Plant Bio-oil Production and Application, Key Laboratory of Bio-resource and Eco-environment, Ministry of Education, College of Life Sciences, Sichuan University, Chengdu 610064, P.R. China
| | - Jason A Corwin
- Department of Ecology and Evolution Biology, University of Colorado, Boulder, Colorado 80309-0334
| | - Daniel Copeland
- Department of Plant Sciences, University of California, Davis, California 95616
| | - Julie Feusier
- Department of Plant Sciences, University of California, Davis, California 95616
| | - Robert Eshbaugh
- Department of Plant Sciences, University of California, Davis, California 95616
| | - Fang Chen
- National and Local Joint Engineering Laboratory for Energy Plant Bio-oil Production and Application, Key Laboratory of Bio-resource and Eco-environment, Ministry of Education, College of Life Sciences, Sichuan University, Chengdu 610064, P.R. China
| | - Susana Atwell
- Department of Plant Sciences, University of California, Davis, California 95616
| | - Daniel J Kliebenstein
- Department of Plant Sciences, University of California, Davis, California 95616
- DynaMo Center of Excellence, University of Copenhagen, DK-1871 Frederiksberg C, Denmark
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211
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Qin X, Zhang RX, Ge S, Zhou T, Liang YK. Sphingosine kinase AtSPHK1 functions in fumonisin B1-triggered cell death in Arabidopsis. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2017; 119:70-80. [PMID: 28846870 DOI: 10.1016/j.plaphy.2017.08.008] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/31/2017] [Revised: 08/01/2017] [Accepted: 08/11/2017] [Indexed: 05/12/2023]
Abstract
The fungal toxin Fumonisin B1 (FB1) is a strong inducer to trigger plant hypersensitive responses (HR) along with increased long chain bases (LCB) and long chain base phosphates (LCBP) contents, though the regulatory mechanism of FB1 action and how the LCB/LCBP signalling cassette functions during the process is still not fully understood. Here, we report sphingosine kinase 1 (SPHK1) as a key factor in FB1-induced HR by modulating the salicylic acid (SA) pathway and reactive oxygen species (ROS) accumulation in Arabidopsis thaliana. Overexpression of SPHK1 increases the FB1-induced accumulations of ROS and SA. The double mutant that simultaneously overexpresses SPHK1 and suppresses the SPPASE or DPL1, two enzymes are mainly responsible for Phyto-sphingosine-1-phosphate (Phyto-S1P) removal, showed enhanced susceptibility to FB1 killing and FB1-induced SA activation than the plants overexpress SPHK1 alone. Exogenous sphingosine-1-phosphate (S1P) can modulate the transcription of the SA-responsive marker gene PR1 in a concentration-dependent biphasic manner. Suppression of SPHK1 decreases SA production whereas promotes jasmonic acid (JA) biosynthesis in response to FB1 applications. Our findings indicate a role of SPHK1 in modulating FB1-triggered cell death via SA and JA pathway interactions.
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Affiliation(s)
- Xiaoya Qin
- State Key Laboratory of Hybrid Rice, Department of Plant Sciences, College of Life Sciences, Wuhan University, Wuhan 430072, China
| | - Ruo-Xi Zhang
- State Key Laboratory of Hybrid Rice, Department of Plant Sciences, College of Life Sciences, Wuhan University, Wuhan 430072, China
| | - Shengchao Ge
- State Key Laboratory of Hybrid Rice, Department of Plant Sciences, College of Life Sciences, Wuhan University, Wuhan 430072, China
| | - Tao Zhou
- State Key Laboratory of Hybrid Rice, Department of Plant Sciences, College of Life Sciences, Wuhan University, Wuhan 430072, China
| | - Yun-Kuan Liang
- State Key Laboratory of Hybrid Rice, Department of Plant Sciences, College of Life Sciences, Wuhan University, Wuhan 430072, China.
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Rizzi YS, Cecchini NM, Fabro G, Alvarez ME. Differential control and function of Arabidopsis ProDH1 and ProDH2 genes on infection with biotrophic and necrotrophic pathogens. MOLECULAR PLANT PATHOLOGY 2017; 18:1164-1174. [PMID: 27526663 PMCID: PMC6638284 DOI: 10.1111/mpp.12470] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/09/2016] [Revised: 08/12/2016] [Accepted: 08/14/2016] [Indexed: 05/05/2023]
Abstract
Arabidopsis contains two proline dehydrogenase (ProDH) genes, ProDH1 and ProDH2, encoding for homologous and functional isoenzymes. Although ProDH1 has been studied extensively, especially under abiotic stress, ProDH2 has only started to be analysed in recent years. These genes display distinctive expression patterns and show weak transcriptional co-regulation, but are both activated in pathogen-infected tissues. We have demonstrated previously that Arabidopsis plants with silenced ProDH1/2 expression fail to trigger defences against the hemibiotrophic bacterial pathogen Pseudomonas syringae pv. tomato AvrRpm1 (Pst-AvrRpm1), and that ProDH1 and ProDH2 are differentially regulated by salicylic acid (SA). In the current work, we used prodh1 and prodh2 single-mutant plants to assess the particular contribution of each gene to resistance against Pst-AvrRpm1 and the necrotrophic fungal pathogen Botrytis cinerea. In addition, we studied the sensitivity of ProDH1 and ProDH2 to the jasmonic acid (JA) defence pathway. We found that ProDH1 and ProDH2 are both necessary to achieve maximum resistance against Pst-AvrRpm1 and B. cinerea. However, ProDH2 has a major effect on early restriction of B. cinerea growth. Interestingly, ProDH1 is up-regulated by SA and JA, whereas ProDH2 is only activated by JA, and both genes display transcriptional inter-regulation at basal and infection conditions. These studies provide the first evidence of the contribution of ProDH2 to disease resistance, and describe the differential regulation and non-redundant but complementary function of both enzyme isoforms in infected tissues, providing support for a fundamental role of ProDH in the control of biotrophic and necrotrophic pathogens.
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Affiliation(s)
- Yanina Soledad Rizzi
- Centro de Investigaciones en Química Biológica de Córdoba, CIQUIBIC, CONICET, Departamento de Química BiológicaFacultad de Ciencias Químicas, Universidad Nacional de Córdoba, Haya de la Torre y Medina Allende, Ciudad UniversitariaCórdobaX5000HUAArgentina
| | - Nicolás Miguel Cecchini
- Centro de Investigaciones en Química Biológica de Córdoba, CIQUIBIC, CONICET, Departamento de Química BiológicaFacultad de Ciencias Químicas, Universidad Nacional de Córdoba, Haya de la Torre y Medina Allende, Ciudad UniversitariaCórdobaX5000HUAArgentina
| | - Georgina Fabro
- Centro de Investigaciones en Química Biológica de Córdoba, CIQUIBIC, CONICET, Departamento de Química BiológicaFacultad de Ciencias Químicas, Universidad Nacional de Córdoba, Haya de la Torre y Medina Allende, Ciudad UniversitariaCórdobaX5000HUAArgentina
| | - María Elena Alvarez
- Centro de Investigaciones en Química Biológica de Córdoba, CIQUIBIC, CONICET, Departamento de Química BiológicaFacultad de Ciencias Químicas, Universidad Nacional de Córdoba, Haya de la Torre y Medina Allende, Ciudad UniversitariaCórdobaX5000HUAArgentina
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213
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Noman A, Liu Z, Aqeel M, Zainab M, Khan MI, Hussain A, Ashraf MF, Li X, Weng Y, He S. Basic leucine zipper domain transcription factors: the vanguards in plant immunity. Biotechnol Lett 2017; 39:1779-1791. [DOI: 10.1007/s10529-017-2431-1] [Citation(s) in RCA: 38] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2017] [Accepted: 08/31/2017] [Indexed: 01/05/2023]
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214
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A chemical approach to manipulate the algal growth, lipid content and high-value alpha-linolenic acid for biodiesel production. ALGAL RES 2017. [DOI: 10.1016/j.algal.2017.08.016] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
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215
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Chou WC, Lin SS, Yeh SD, Li SL, Peng YC, Fan YH, Chen TC. Characterization of the genome of a phylogenetically distinct tospovirus and its interactions with the local lesion-induced host Chenopodium quinoa by whole-transcriptome analyses. PLoS One 2017; 12:e0182425. [PMID: 28771638 PMCID: PMC5542687 DOI: 10.1371/journal.pone.0182425] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2017] [Accepted: 07/18/2017] [Indexed: 01/26/2023] Open
Abstract
Chenopodium quinoa is a natural local lesion host of numerous plant viruses, including tospoviruses (family Bunyaviridae). Groundnut chlorotic fan-spot tospovirus (GCFSV) has been shown to consistently induce local lesions on the leaves of C. quinoa 4 days post-inoculation (dpi). To reveal the whole genome of GCFSV and its interactions with C. quinoa, RNA-seq was performed to determine the transcriptome profiles of C. quinoa leaves. The high-throughput reads from infected C. quinoa leaves were used to identify the whole genome sequence of GCFSV and its single nucleotide polymorphisms. Our results indicated that GCFSV is a phylogenetically distinct tospovirus. Moreover, 27,170 coding and 29,563 non-coding sequences of C. quinoa were identified through de novo assembly, mixing reads from mock and infected samples. Several key genes involved in the modulation of hypersensitive response (HR) were identified. The expression levels of 4,893 deduced complete genes annotated using the Arabidopsis genome indicated that several HR-related orthologues of pathogenesis-related proteins, transcription factors, mitogen-activated protein kinases, and defense proteins were significantly expressed in leaves that formed local lesions. Here, we also provide new insights into the replication progression of a tospovirus and the molecular regulation of the C. quinoa response to virus infection.
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Affiliation(s)
- Wan-Chen Chou
- Department of Biotechnology, Asia University, Wufeng, Taichung, Taiwan
| | - Shih-Shun Lin
- Institute of Biotechnology, National Taiwan University, Taipei, Taiwan
- Agricultural Biotechnology Research Center, Academia Sinica, Taipei, Taiwan, Taiwan
| | - Shyi-Dong Yeh
- Department of Plant Pathology, National Chung Hsing University, Taichung, Taiwan
- NCHU-UCD Plant and Food Biotechnology Center, National Chung Hsing University, Taichung, Taiwan
| | - Siang-Ling Li
- Department of Biotechnology, Asia University, Wufeng, Taichung, Taiwan
| | | | - Ya-Hsu Fan
- Department of Biotechnology, Asia University, Wufeng, Taichung, Taiwan
| | - Tsung-Chi Chen
- Department of Biotechnology, Asia University, Wufeng, Taichung, Taiwan
- Department of Medical Research, China Medical University Hospital, China Medical University, Taichung, Taiwan
- * E-mail:
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216
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Birkenbihl RP, Liu S, Somssich IE. Transcriptional events defining plant immune responses. CURRENT OPINION IN PLANT BIOLOGY 2017; 38:1-9. [PMID: 28458046 DOI: 10.1016/j.pbi.2017.04.004] [Citation(s) in RCA: 105] [Impact Index Per Article: 15.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/26/2017] [Revised: 04/06/2017] [Accepted: 04/10/2017] [Indexed: 05/20/2023]
Abstract
Rapid and massive transcriptional reprogramming upon pathogen recognition is the decisive step in plant-phytopathogen interactions. Plant transcription factors (TFs) are key players in this process but they require a suite of other context-specific co-regulators to establish sensory transcription regulatory networks to bring about host immunity. Molecular, genetic and biochemical studies, particularly in the model plants Arabidopsis and rice, are continuously uncovering new components of the transcriptional machinery that can selectively impact host resistance toward a diverse range of pathogens. Moreover, detailed studies on key immune regulators, such as WRKY TFs and NPR1, are beginning to reveal the underlying mechanisms by which defense hormones influence the function of these factors. Here we provide a short update on such recent developments.
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Affiliation(s)
- Rainer P Birkenbihl
- Department of Plant Microbe Interactions, Max Planck Institute for Plant Breeding Research, Carl-von-Linné Weg 10, 50829 Koeln, Germany.
| | - Shouan Liu
- College of Plant Sciences, Jilin University, 130062 Changchun, China.
| | - Imre E Somssich
- Department of Plant Microbe Interactions, Max Planck Institute for Plant Breeding Research, Carl-von-Linné Weg 10, 50829 Koeln, Germany.
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217
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Withers J, Dong X. Post-translational regulation of plant immunity. CURRENT OPINION IN PLANT BIOLOGY 2017; 38:124-132. [PMID: 28538164 PMCID: PMC5644497 DOI: 10.1016/j.pbi.2017.05.004] [Citation(s) in RCA: 80] [Impact Index Per Article: 11.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/17/2017] [Revised: 05/03/2017] [Accepted: 05/09/2017] [Indexed: 05/20/2023]
Abstract
Plants have evolved multi-layered molecular defense strategies to protect against pathogens. Plant immune signaling largely relies on post-translational modifications (PTMs) to induce rapid alterations of signaling pathways to achieve a response that is appropriate to the type of pathogen and infection pressure. In host cells, dynamic PTMs have emerged as powerful regulatory mechanisms that cells use to adjust their immune response. PTM is also a virulence strategy used by pathogens to subvert host immunity through the activities of effector proteins secreted into the host cell. Recent studies focusing on deciphering post-translational mechanisms underlying plant immunity have offered an in-depth view of how PTMs facilitate efficient immune responses and have provided a more dynamic and holistic view of plant immunity.
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Affiliation(s)
- John Withers
- Howard Hughes Medical Institute, Department of Biology, Duke University, Durham, NC 27708, USA.
| | - Xinnian Dong
- Howard Hughes Medical Institute, Department of Biology, Duke University, Durham, NC 27708, USA
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218
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Bonnet C, Lassueur S, Ponzio C, Gols R, Dicke M, Reymond P. Combined biotic stresses trigger similar transcriptomic responses but contrasting resistance against a chewing herbivore in Brassica nigra. BMC PLANT BIOLOGY 2017; 17:127. [PMID: 28716054 PMCID: PMC5513356 DOI: 10.1186/s12870-017-1074-7] [Citation(s) in RCA: 42] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/06/2017] [Accepted: 07/10/2017] [Indexed: 05/06/2023]
Abstract
BACKGROUND In nature, plants are frequently exposed to simultaneous biotic stresses that activate distinct and often antagonistic defense signaling pathways. How plants integrate this information and whether they prioritize one stress over the other is not well understood. RESULTS We investigated the transcriptome signature of the wild annual crucifer, Brassica nigra, in response to eggs and caterpillars of Pieris brassicae butterflies, Brevicoryne brassicae aphids and the bacterial phytopathogen Xanthomonas campestris pv. raphani (Xcr). Pretreatment with egg extract, aphids, or Xcr had a weak impact on the subsequent transcriptome profile of plants challenged with caterpillars, suggesting that the second stress dominates the transcriptional response. Nevertheless, P. brassicae larval performance was strongly affected by egg extract or Xcr pretreatment and depended on the site where the initial stress was applied. Although egg extract and Xcr pretreatments inhibited insect-induced defense gene expression, suggesting salicylic acid (SA)/jasmonic acid (JA) pathway cross talk, this was not strictly correlated with larval performance. CONCLUSION These results emphasize the need to better integrate plant responses at different levels of biological organization and to consider localized effects in order to predict the consequence of multiple stresses on plant resistance.
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Affiliation(s)
- Christelle Bonnet
- Department of Plant Molecular Biology, University of Lausanne, Biophore Building, 1015, Lausanne, Switzerland
| | - Steve Lassueur
- Department of Plant Molecular Biology, University of Lausanne, Biophore Building, 1015, Lausanne, Switzerland
| | - Camille Ponzio
- Laboratory of Entomology, Wageningen University, P.O. Box 16, 6700 AA, Wageningen, The Netherlands
| | - Rieta Gols
- Laboratory of Entomology, Wageningen University, P.O. Box 16, 6700 AA, Wageningen, The Netherlands
| | - Marcel Dicke
- Laboratory of Entomology, Wageningen University, P.O. Box 16, 6700 AA, Wageningen, The Netherlands
| | - Philippe Reymond
- Department of Plant Molecular Biology, University of Lausanne, Biophore Building, 1015, Lausanne, Switzerland.
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Liu D, Xin M, Zhou X, Wang C, Zhang Y, Qin Z. Expression and functional analysis of the transcription factor-encoding Gene CsERF004 in cucumber during Pseudoperonospora cubensis and Corynespora cassiicola infection. BMC PLANT BIOLOGY 2017; 17:96. [PMID: 28583084 PMCID: PMC5460474 DOI: 10.1186/s12870-017-1049-8] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/24/2017] [Accepted: 05/25/2017] [Indexed: 05/13/2023]
Abstract
BACKGROUND Cucumber downy mildew, caused by P. cubensis, is an important leaf disease that can severely affect cucumber production. In recent years, cucumber target spot, caused by C. cassiicola, has been reported in both Asia and Europe and is now considered as a major disease disrupting cucumber production. Single-disease-resistant cucumber varieties have been unable to satisfy production needs. To explore the molecular mechanisms of cucumber resistance to these two diseases, cucumber cultivars D9320 (resistant to downy mildew and target spot) and D0401 (susceptible to downy mildew and target spot) were used as experimental materials in this study. We used transcriptome sequencing technology to identify genes related to disease resistance and verified using transgenic technology. RESULTS We screened out the cucumber resistance-related gene CsERF004 using transcriptome sequencing technology. Induction by pathogens, salicylic acid (SA), and ethylene (ET) resulted in the up-regulation of CsERF004. Three treatments, namely, inoculation with C. cassiicola alone, inoculation with P. cubensis alone, and simultaneous inoculation with both pathogens, all resulted in the significant and sustained up-regulation of CsERF004 in the resistant cultivar D9320, during the early stage of infection. In the susceptible cultivar D0401, CsERF004 expression was also significantly up-regulated at the later stage of infection but to a lesser extent and for a shorter duration than in the resistant cultivar D9320. The CsERF004 gene encodes a protein localizes to the nucleus. The over-expression of CsERF004 in the susceptible cultivar D0401 resulted in the significant up-regulation of the CsPR1 and CsPR4 genes and increased the levels of SA and ET, which enhanced the resistance of cucumber to downy mildew and target spot. CONCLUSIONS Analyses of the CsERF004 expression pattern in disease-resistant and susceptible cucumber cultivars and transgenic validation indicate that CsERF004 confers resistance to P. cubensis and C. cassiicola. The findings of this study can help to better understanding of mechanisms of response to pathogens and in establishment the genetic basis for the development of cucumber broad-spectrum resistant cultivars.
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Affiliation(s)
- Dong Liu
- College of Horticulture and Landscape Architecture, Key Laboratory of Biology and Genetic Improvement of Horticultural Crops (Northeast Region), Northeast Agricultural University, Harbin, 150030, China
| | - Ming Xin
- College of Horticulture and Landscape Architecture, Key Laboratory of Biology and Genetic Improvement of Horticultural Crops (Northeast Region), Northeast Agricultural University, Harbin, 150030, China
| | - Xiuyan Zhou
- College of Horticulture and Landscape Architecture, Key Laboratory of Biology and Genetic Improvement of Horticultural Crops (Northeast Region), Northeast Agricultural University, Harbin, 150030, China
| | - Chunhua Wang
- College of Horticulture and Landscape Architecture, Key Laboratory of Biology and Genetic Improvement of Horticultural Crops (Northeast Region), Northeast Agricultural University, Harbin, 150030, China
| | - Yanju Zhang
- College of Agriculture, Northeast Agricultural University, Harbin, 150030, China
| | - Zhiwei Qin
- College of Horticulture and Landscape Architecture, Key Laboratory of Biology and Genetic Improvement of Horticultural Crops (Northeast Region), Northeast Agricultural University, Harbin, 150030, China.
- Heilongjiang Bayi Agricultural University, Daqing, 163319, China.
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220
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Davila Olivas NH, Frago E, Thoen MPM, Kloth KJ, Becker FFM, van Loon JJA, Gort G, Keurentjes JJB, van Heerwaarden J, Dicke M. Natural variation in life history strategy of Arabidopsis thaliana determines stress responses to drought and insects of different feeding guilds. Mol Ecol 2017; 26:2959-2977. [PMID: 28295823 PMCID: PMC5485070 DOI: 10.1111/mec.14100] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2015] [Revised: 02/21/2017] [Accepted: 02/27/2017] [Indexed: 12/31/2022]
Abstract
Plants are sessile organisms and, consequently, are exposed to a plethora of stresses in their local habitat. As a result, different populations of a species are subject to different selection pressures leading to adaptation to local conditions and intraspecific divergence. The annual brassicaceous plant Arabidopsis thaliana is an attractive model for ecologists and evolutionary biologists due to the availability of a large collection of resequenced natural accessions. Accessions of A. thaliana display one of two different life cycle strategies: summer and winter annuals. We exposed a collection of 308 European Arabidopsis accessions, that have been genotyped for 250K SNPs, to a range of stresses: one abiotic stress (drought), four biotic stresses (Pieris rapae caterpillars, Plutella xylostella caterpillars, Frankliniella occidentalis thrips and Myzus persicae aphids) and two combined stresses (drought plus P. rapae and Botrytis cinerea fungus plus P. rapae). We identified heritable genetic variation for responses to the different stresses, estimated by narrow-sense heritability. We found that accessions displaying different life cycle strategies differ in their response to stresses. Winter annuals are more resistant to drought, aphids and thrips and summer annuals are more resistant to P. rapae and P. xylostella caterpillars. Summer annuals are also more resistant to the combined stresses of drought plus P. rapae and infection by the fungus Botryris cinerea plus herbivory by P. rapae. Adaptation to drought displayed a longitudinal gradient. Finally, trade-offs were recorded between the response to drought and responses to herbivory by caterpillars of the specialist herbivore P. rapae.
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Affiliation(s)
| | - Enric Frago
- Laboratory of EntomologyWageningen UniversityWageningenThe Netherlands
| | - Manus P. M. Thoen
- Laboratory of EntomologyWageningen UniversityWageningenThe Netherlands
- Wageningen Plant ResearchWageningen University and ResearchWageningenThe Netherlands
- Laboratory of Plant PhysiologyWageningen UniversityWageningenThe Netherlands
| | - Karen J. Kloth
- Laboratory of EntomologyWageningen UniversityWageningenThe Netherlands
- Wageningen Plant ResearchWageningen University and ResearchWageningenThe Netherlands
- Laboratory of Plant PhysiologyWageningen UniversityWageningenThe Netherlands
| | | | | | - Gerrit Gort
- BiometrisWageningen University and ResearchWageningenThe Netherlands
| | | | | | - Marcel Dicke
- Laboratory of EntomologyWageningen UniversityWageningenThe Netherlands
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221
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Gong Q, Yang Z, Wang X, Butt HI, Chen E, He S, Zhang C, Zhang X, Li F. Salicylic acid-related cotton (Gossypium arboreum) ribosomal protein GaRPL18 contributes to resistance to Verticillium dahliae. BMC PLANT BIOLOGY 2017; 17:59. [PMID: 28253842 PMCID: PMC5335750 DOI: 10.1186/s12870-017-1007-5] [Citation(s) in RCA: 57] [Impact Index Per Article: 8.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/13/2016] [Accepted: 02/24/2017] [Indexed: 05/20/2023]
Abstract
BACKGROUND Verticillium dahliae is a phytopathogenic fungal pathogen that causes vascular wilt diseases responsible for considerable decreases in cotton yields. The complex mechanism underlying cotton resistance to Verticillium wilt remains uncharacterized. Identifying an endogenous resistance gene may be useful for controlling this disease. RESULTS We cloned the ribosomal protein L18 (GaRPL18) gene, which mediates resistance to Verticillium wilt, from a wilt-resistant cotton species (Gossypium arboreum). We then characterized the function of this gene in cotton and Arabidopsis thaliana plants. GaRPL18 encodes a 60S ribosomal protein subunit important for intracellular protein biosynthesis. However, previous studies revealed that some ribosomal proteins are also inhibitory toward oncogenesis and congenital diseases in humans and play a role in plant disease defense. Here, we observed that V. dahliae infections induce GaRPL18 expression. Furthermore, we determined that the GaRPL18 expression pattern is consistent with the disease resistance level of different cotton varieties. GaRPL18 expression is upregulated by salicylic acid (SA) treatments, suggesting the involvement of GaRPL18 in the SA signal transduction pathway. Virus-induced gene silencing technology was used to determine whether the GaRPL18 expression level influences cotton disease resistance. Wilt-resistant cotton species in which GaRPL18 was silenced became more susceptible to V. dahliae than the control plants because of a significant decrease in the abundance of immune-related molecules. We also transformed A. thaliana ecotype Columbia (Col-0) plants with GaRPL18 according to the floral dip method. The plants overexpressing GaRPL18 were more resistant to V. dahliae infections than the wild-type Col-0 plants. The enhanced resistance of transgenic A. thaliana plants to V. dahliae is likely mediated by the SA pathway. CONCLUSION Our findings provide new insights into the role of GaRPL18, indicating that it plays a crucial role in resistance to cotton "cancer", also known as Verticillium wilt, mainly regulated by an SA-related signaling pathway mechanism.
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Affiliation(s)
- Qian Gong
- State Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang, 455000 China
| | - Zhaoen Yang
- State Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang, 455000 China
| | - Xiaoqian Wang
- State Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang, 455000 China
| | - Hamama Islam Butt
- State Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang, 455000 China
| | - Eryong Chen
- State Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang, 455000 China
| | - Shoupu He
- State Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang, 455000 China
| | - Chaojun Zhang
- State Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang, 455000 China
| | - Xueyan Zhang
- State Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang, 455000 China
| | - Fuguang Li
- State Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang, 455000 China
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Zhang L, Zhang F, Melotto M, Yao J, He SY. Jasmonate signaling and manipulation by pathogens and insects. JOURNAL OF EXPERIMENTAL BOTANY 2017; 68:1371-1385. [PMID: 28069779 PMCID: PMC6075518 DOI: 10.1093/jxb/erw478] [Citation(s) in RCA: 117] [Impact Index Per Article: 16.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/14/2016] [Accepted: 12/01/2016] [Indexed: 05/18/2023]
Abstract
Plants synthesize jasmonates (JAs) in response to developmental cues or environmental stresses, in order to coordinate plant growth, development or defense against pathogens and herbivores. Perception of pathogen or herbivore attack promotes synthesis of jasmonoyl-L-isoleucine (JA-Ile), which binds to the COI1-JAZ receptor, triggering the degradation of JAZ repressors and induction of transcriptional reprogramming associated with plant defense. Interestingly, some virulent pathogens have evolved various strategies to manipulate JA signaling to facilitate their exploitation of plant hosts. In this review, we focus on recent advances in understanding the mechanism underlying the enigmatic switch between transcriptional repression and hormone-dependent transcriptional activation of JA signaling. We also discuss various strategies used by pathogens and insects to manipulate JA signaling and how interfering with this could be used as a novel means of disease control.
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Affiliation(s)
- Li Zhang
- Department of Energy Plant Research Laboratory, Michigan State University, East Lansing, MI 48824
- Department of Plant Biology, Michigan State University, East Lansing, MI 48824
| | - Feng Zhang
- Department of Energy Plant Research Laboratory, Michigan State University, East Lansing, MI 48824
- Laboratory of Structural Sciences and Laboratory of Structural Biology and Biochemistry, Van Andel Research Institute, Grand Rapids, MI 49503
- College of Plant Protection, Nanjing Agricultural University, No. 1 Weigang, 210095, Nanjing, Jiangsu Province, China
| | - Maeli Melotto
- Department of Plant Sciences, University of California, Davis, CA 95616
| | - Jian Yao
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | - Sheng Yang He
- Department of Energy Plant Research Laboratory, Michigan State University, East Lansing, MI 48824
- Department of Plant Biology, Michigan State University, East Lansing, MI 48824
- Plant Resilience Institute, Michigan State University, East Lansing, MI 48824
- Howard Hughes Medical Institute, Michigan State University, East Lansing, MI 48824
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Timmermann T, Armijo G, Donoso R, Seguel A, Holuigue L, González B. Paraburkholderia phytofirmans PsJN Protects Arabidopsis thaliana Against a Virulent Strain of Pseudomonas syringae Through the Activation of Induced Resistance. MOLECULAR PLANT-MICROBE INTERACTIONS : MPMI 2017; 30:215-230. [PMID: 28118091 DOI: 10.1094/mpmi-09-16-0192-r] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
Paraburkholderia phytofirmans PsJN is a plant growth-promoting rhizobacterium (PGPR) that stimulates plant growth and improves tolerance to abiotic stresses. This study analyzed whether strain PsJN can reduce plant disease severity and proliferation of the virulent strain Pseudomonas syringae pv. tomato DC3000, in Arabidopsis plants, through the activation of induced resistance. Arabidopsis plants previously exposed to strain PsJN showed a reduction in disease severity and pathogen proliferation in leaves compared with noninoculated, infected plants. The plant defense-related genes WRKY54, PR1, ERF1, and PDF1.2 demonstrated increased and more rapid expression in strain PsJN-treated plants compared with noninoculated, infected plants. Transcriptional analyses and functional analysis using signaling mutant plants suggested that resistance to infection by DC3000 in plants treated with strain PsJN involves salicylic acid-, jasmonate-, and ethylene-signaling pathways to activate defense genes. Additionally, activation occurs through a specific PGPR-host recognition, being a necessary metabolically active state of the bacterium to trigger the resistance in Arabidopsis, with a strain PsJN-associated molecular pattern only partially involved in the resistance response. This study provides the first report on the mechanism used by the PGPR P. phytofirmans PsJN to protect A. thaliana against a widespread virulent pathogenic bacterium.
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Affiliation(s)
- Tania Timmermann
- 1 Laboratorio de Bioingeniería, Facultad de Ingeniería y Ciencias, Universidad Adolfo Ibáñez, Santiago, Chile
- 3 Millennium Nucleus Center for Plant Systems and Synthetic Biology, Santiago, Chile; and
- 4 Center of Applied Ecology and Sustainability, Santiago, Chile
| | - Grace Armijo
- 2 Departamento de Genética Molecular y Microbiología, Facultad de Ciencias Biológicas, Pontificia Universidad Católica de Chile, Santiago, Chile
- 3 Millennium Nucleus Center for Plant Systems and Synthetic Biology, Santiago, Chile; and
| | - Raúl Donoso
- 1 Laboratorio de Bioingeniería, Facultad de Ingeniería y Ciencias, Universidad Adolfo Ibáñez, Santiago, Chile
- 3 Millennium Nucleus Center for Plant Systems and Synthetic Biology, Santiago, Chile; and
- 4 Center of Applied Ecology and Sustainability, Santiago, Chile
| | - Aldo Seguel
- 2 Departamento de Genética Molecular y Microbiología, Facultad de Ciencias Biológicas, Pontificia Universidad Católica de Chile, Santiago, Chile
- 3 Millennium Nucleus Center for Plant Systems and Synthetic Biology, Santiago, Chile; and
| | - Loreto Holuigue
- 2 Departamento de Genética Molecular y Microbiología, Facultad de Ciencias Biológicas, Pontificia Universidad Católica de Chile, Santiago, Chile
- 3 Millennium Nucleus Center for Plant Systems and Synthetic Biology, Santiago, Chile; and
| | - Bernardo González
- 1 Laboratorio de Bioingeniería, Facultad de Ingeniería y Ciencias, Universidad Adolfo Ibáñez, Santiago, Chile
- 3 Millennium Nucleus Center for Plant Systems and Synthetic Biology, Santiago, Chile; and
- 4 Center of Applied Ecology and Sustainability, Santiago, Chile
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224
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Copley T, Bayen S, Jabaji S. Biochar Amendment Modifies Expression of Soybean and Rhizoctonia solani Genes Leading to Increased Severity of Rhizoctonia Foliar Blight. FRONTIERS IN PLANT SCIENCE 2017; 8:221. [PMID: 28270822 PMCID: PMC5318381 DOI: 10.3389/fpls.2017.00221] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/20/2016] [Accepted: 02/06/2017] [Indexed: 06/06/2023]
Abstract
Application of biochar, a pyrolyzed biomass from organic sources, to agricultural soils is considered a promising strategy to sustain soil fertility leading to increased plant productivity. It is also known that applications of biochar to soilless potting substrates and to soil increases resistance of plants against diseases, but also bear the potential to have inconsistent and contradictory results depending on the type of biochar feedstock and application rate. The following study examined the effect of biochar produced from maple bark on soybean resistance against Rhizoctonia foliar blight (RFB) disease caused by Rhizoctonia solani, and examined the underlying molecular responses of both soybean and R. solani during interaction with biochar application. Soybean plants were grown in the presence of 1, 3, or 5% (w/w) or absence of maple bark biochar for 2 weeks, and leaves were infected with R. solani AG1-IA. At lower concentrations (1 and 3%), biochar was ineffective against RFB, however at the 5% amendment rate, biochar was conducive to RFB with a significant increase in disease severity. For the first time, soybean and R. solani responsive genes were monitored during the development of RFB on detached leaves of plants grown in the absence and presence of 5% biochar at 0, 6, 12, and 24 h post-inoculation (h.p.i.). Generally, large decreases in soybean transcript abundances of genes associated with primary metabolism such as glycolysis, tricarboxylic acid (TCA) cycle, starch, amino acid and glutathione metabolism together with genes associated with plant defense and immunity such as salicylic acid (SA) and jasmonic acid pathways were observed after exposure of soybean to high concentration of biochar. Such genes are critical for plant protection against biotic and abiotic stresses. The general down-regulation of soybean genes and changes in SA hormonal balance were tightly linked with an increased susceptibility to RFB. In conjunction, R. solani genes associated with carbohydrate metabolism were up-regulated, while genes involved in redox reactions and detoxification had varying effects. In conclusion, this study presents strong evidence that maple bark biochar increased susceptibility of soybean to a foliar disease. This condition is partly mediated by the down-regulation of soybean genes leading to reduced immunity and also affecting R. solani gene expression.
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Affiliation(s)
- Tanya Copley
- Plant Science Department, McGill UniversityMontreal, QC, Canada
| | - Stéphane Bayen
- Department of Food Science and Agricultural Chemistry, McGill UniversityMontreal, QC, Canada
| | - Suha Jabaji
- Plant Science Department, McGill UniversityMontreal, QC, Canada
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225
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Bubici G, Carluccio AV, Stavolone L, Cillo F. Prosystemin overexpression induces transcriptional modifications of defense-related and receptor-like kinase genes and reduces the susceptibility to Cucumber mosaic virus and its satellite RNAs in transgenic tomato plants. PLoS One 2017; 12:e0171902. [PMID: 28182745 PMCID: PMC5300215 DOI: 10.1371/journal.pone.0171902] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/04/2016] [Accepted: 01/27/2017] [Indexed: 01/06/2023] Open
Abstract
Systemin is a plant signal peptide hormone involved in the responses to wounding and insect damage in the Solanaceae family. It works in the same signaling pathway of jasmonic acid (JA) and enhances the expression of proteinase inhibitors. With the aim of studying a role for systemin in plant antiviral responses, a tomato (Solanum lycopersicum) transgenic line overexpressing the prosystemin cDNA, i.e. the systemin precursor, was inoculated with Cucumber mosaic virus (CMV) strain Fny supporting either a necrogenic or a non-necrogenic satellite RNA (satRNA) variant. Transgenic plants showed reduced susceptibility to both CMV/satRNA combinations. While symptoms of the non-necrogenic inoculum were completely suppressed, a delayed onset of lethal disease occurred in about half of plants challenged with the necrogenic inoculum. RT-qPCR analysis showed a correlation between the systemin-mediated reduced susceptibility and the JA biosynthetic and signaling pathways (e.g. transcriptional alteration of lipoxygenase D and proteinase inhibitor II). Moreover, transgenically overexpressed systemin modulated the expression of a selected set of receptor-like protein kinase (RLK) genes, including some playing a known role in plant innate immunity. A significant correlation was found between the expression profiles of some RLKs and the systemin-mediated reduced susceptibility to CMV/satRNA. These results show that systemin can increase plant defenses against CMV/satRNA through transcriptional reprogramming of diverse signaling pathways.
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Affiliation(s)
- Giovanni Bubici
- Istituto per la Protezione Sostenibile delle Piante, Consiglio Nazionale delle Ricerche, Bari, Italy
| | - Anna Vittoria Carluccio
- Istituto per la Protezione Sostenibile delle Piante, Consiglio Nazionale delle Ricerche, Bari, Italy
| | - Livia Stavolone
- Istituto per la Protezione Sostenibile delle Piante, Consiglio Nazionale delle Ricerche, Bari, Italy.,International Institute of Tropical Agriculture, Ibadan, Oyo State, Nigeria
| | - Fabrizio Cillo
- Istituto per la Protezione Sostenibile delle Piante, Consiglio Nazionale delle Ricerche, Bari, Italy
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226
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Caarls L, Van der Does D, Hickman R, Jansen W, Verk MCV, Proietti S, Lorenzo O, Solano R, Pieterse CMJ, Van Wees SCM. Assessing the Role of ETHYLENE RESPONSE FACTOR Transcriptional Repressors in Salicylic Acid-Mediated Suppression of Jasmonic Acid-Responsive Genes. PLANT & CELL PHYSIOLOGY 2017; 58:266-278. [PMID: 27837094 DOI: 10.1093/pcp/pcw187] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/29/2016] [Accepted: 10/27/2016] [Indexed: 05/28/2023]
Abstract
Salicylic acid (SA) and jasmonic acid (JA) cross-communicate in the plant immune signaling network to finely regulate induced defenses. In Arabidopsis, SA antagonizes many JA-responsive genes, partly by targeting the ETHYLENE RESPONSE FACTOR (ERF)-type transcriptional activator ORA59. Members of the ERF transcription factor family typically bind to GCC-box motifs in the promoters of JA- and ethylene-responsive genes, thereby positively or negatively regulating their expression. The GCC-box motif is sufficient for SA-mediated suppression of JA-responsive gene expression. Here, we investigated whether SA-induced ERF-type transcriptional repressors, which may compete with JA-induced ERF-type activators for binding at the GCC-box, play a role in SA/JA antagonism. We selected ERFs that are transcriptionally induced by SA and/or possess an EAR transcriptional repressor motif. Several of the 16 ERFs tested suppressed JA-dependent gene expression, as revealed by enhanced JA-induced PDF1.2 or VSP2 expression levels in the corresponding erf mutants, while others were involved in activation of these genes. However, SA could antagonize JA-induced PDF1.2 or VSP2 in all erf mutants, suggesting that the tested ERF transcriptional repressors are not required for SA/JA cross-talk. Moreover, a mutant in the co-repressor TOPLESS, that showed reduction in repression of JA signaling, still displayed SA-mediated antagonism of PDF1.2 and VSP2. Collectively, these results suggest that SA-regulated ERF transcriptional repressors are not essential for antagonism of JA-responsive gene expression by SA. We further show that de novo SA-induced protein synthesis is required for suppression of JA-induced PDF1.2, pointing to SA-stimulated production of an as yet unknown protein that suppresses JA-induced transcription.
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Affiliation(s)
- Lotte Caarls
- Plant-Microbe Interactions, Department of Biology, Faculty of Science, Utrecht University, CH Utrecht, The Netherlands
| | - Dieuwertje Van der Does
- Plant-Microbe Interactions, Department of Biology, Faculty of Science, Utrecht University, CH Utrecht, The Netherlands
| | - Richard Hickman
- Plant-Microbe Interactions, Department of Biology, Faculty of Science, Utrecht University, CH Utrecht, The Netherlands
| | - Wouter Jansen
- Plant-Microbe Interactions, Department of Biology, Faculty of Science, Utrecht University, CH Utrecht, The Netherlands
| | - Marcel C Van Verk
- Plant-Microbe Interactions, Department of Biology, Faculty of Science, Utrecht University, CH Utrecht, The Netherlands
- Bioinformatics, Department of Biology, Faculty of Science, Utrecht University, CH Utrecht, The Netherlands
| | - Silvia Proietti
- Plant-Microbe Interactions, Department of Biology, Faculty of Science, Utrecht University, CH Utrecht, The Netherlands
| | - Oscar Lorenzo
- Departamento de Fisiologia Vegetal, Centro Hispano-Luso de Investigaciones Agrarias (CIALE), Facultad de Biologia, Universidad de Salamanca, Salamanca, Spain
| | - Roberto Solano
- Department of Plant Molecular Genetics, Centro Nacional de Biotecnología-CSIC, Madrid, Spain
| | - Corné M J Pieterse
- Plant-Microbe Interactions, Department of Biology, Faculty of Science, Utrecht University, CH Utrecht, The Netherlands
| | - Saskia C M Van Wees
- Plant-Microbe Interactions, Department of Biology, Faculty of Science, Utrecht University, CH Utrecht, The Netherlands
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227
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Lievens L, Pollier J, Goossens A, Beyaert R, Staal J. Abscisic Acid as Pathogen Effector and Immune Regulator. FRONTIERS IN PLANT SCIENCE 2017; 8:587. [PMID: 28469630 PMCID: PMC5395610 DOI: 10.3389/fpls.2017.00587] [Citation(s) in RCA: 103] [Impact Index Per Article: 14.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/11/2017] [Accepted: 03/31/2017] [Indexed: 05/18/2023]
Abstract
Abscisic acid (ABA) is a sesquiterpene signaling molecule produced in all kingdoms of life. To date, the best known functions of ABA are derived from its role as a major phytohormone in plant abiotic stress resistance. Different organisms have developed different biosynthesis and signal transduction pathways related to ABA. Despite this, there are also intriguing common themes where ABA often suppresses host immune responses and is utilized by pathogens as an effector molecule. ABA also seems to play an important role in compatible mutualistic interactions such as mycorrhiza and rhizosphere bacteria with plants, and possibly also the animal gut microbiome. The frequent use of ABA in inter-species communication could be a possible reason for the wide distribution and re-invention of ABA as a signaling molecule in different organisms. In humans and animal models, it has been shown that ABA treatment or nutrient-derived ABA is beneficial in inflammatory diseases like colitis and type 2 diabetes, which confer potential to ABA as an interesting nutraceutical or pharmacognostic drug. The anti-inflammatory activity, cellular metabolic reprogramming, and other beneficial physiological and psychological effects of ABA treatment in humans and animal models has sparked an interest in this molecule and its signaling pathway as a novel pharmacological target. In contrast to plants, however, very little is known about the ABA biosynthesis and signaling in other organisms. Genes, tools and knowledge about ABA from plant sciences and studies of phytopathogenic fungi might benefit biomedical studies on the physiological role of endogenously generated ABA in humans.
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Affiliation(s)
- Laurens Lievens
- Unit of Molecular Signal Transduction in Inflammation, VIB-UGent Center for Inflammation Research, VIBGhent, Belgium
- Department of Biomedical Molecular Biology, Ghent UniversityGhent, Belgium
| | - Jacob Pollier
- VIB-UGent Center for Plant Systems Biology, VIBGhent, Belgium
- Department of Plant Biotechnology and Bioinformatics, Ghent UniversityGhent, Belgium
| | - Alain Goossens
- VIB-UGent Center for Plant Systems Biology, VIBGhent, Belgium
- Department of Plant Biotechnology and Bioinformatics, Ghent UniversityGhent, Belgium
| | - Rudi Beyaert
- Unit of Molecular Signal Transduction in Inflammation, VIB-UGent Center for Inflammation Research, VIBGhent, Belgium
- Department of Biomedical Molecular Biology, Ghent UniversityGhent, Belgium
| | - Jens Staal
- Unit of Molecular Signal Transduction in Inflammation, VIB-UGent Center for Inflammation Research, VIBGhent, Belgium
- Department of Biomedical Molecular Biology, Ghent UniversityGhent, Belgium
- *Correspondence: Jens Staal
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228
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López‐Cruz J, Óscar C, Emma F, Pilar G, Carmen G. Absence of Cu-Zn superoxide dismutase BCSOD1 reduces Botrytis cinerea virulence in Arabidopsis and tomato plants, revealing interplay among reactive oxygen species, callose and signalling pathways. MOLECULAR PLANT PATHOLOGY 2017; 18:16-31. [PMID: 26780422 PMCID: PMC6638242 DOI: 10.1111/mpp.12370] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/31/2015] [Revised: 01/12/2016] [Accepted: 01/13/2016] [Indexed: 05/20/2023]
Abstract
Plants activate responses against pathogens, including the oxidative burst. Necrotrophic pathogens can produce reactive oxygen species (ROS) that benefit the colonization process. Previously, we have demonstrated that tomato plants challenged with Botrytis cinerea accumulate ROS and callose, together with the induction of genes involved in defence, signalling and oxidative metabolism. Here, we studied the infection phenotype of the Δbcsod1 strain in both tomato and Arabidopsis plants. This mutant lacks bcsod1, which encodes Cu-Zn superoxide dismutase (SOD). This enzyme catalyses the conversion of superoxide ion ( O2-) into hydrogen peroxide (H2 O2 ). ROS play a protective role and act as signals in plants. Δbcsod1 displayed reduced virulence compared with wild-type B05.10 in both species. Plants infected with Δbcsod1 accumulated less H2 O2 and more O2- than those infected with B05.10, which is associated with an increase in the defensive polymer callose. This supports a major role of fungal SOD in H2 O2 production during the plant-pathogen interaction. The early induction of the callose synthase gene PMR4 suggested that changes in ROS altered plant defensive responses at the transcriptional level. The metabolites and genes involved in signalling and in response to oxidative stress were differentially expressed on Δbcsod1 infection, supporting the notion that plants perceive changes in ROS balance and activate defence responses. A higher O2- /H2 O2 ratio seems to be beneficial for plant protection against this necrotroph. Our results highlight the relevance of callose and the oxylipin 12-oxo-phytodienoic acid (OPDA) in the response to changes in the oxidative environment, and clarify the mechanisms that underlie the responses to Botrytis in Arabidopsis and tomato plants.
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Affiliation(s)
- Jaime López‐Cruz
- Departamento de Bioquímica y Biología Molecular, Universitat de Valencia, Instituto de Agroquímica y Tecnología de AlimentosCSIC46980 Paterna, ValenciaSpain
| | - Crespo‐Salvador Óscar
- Departamento de Bioquímica y Biología Molecular, Universitat de Valencia, Instituto de Agroquímica y Tecnología de AlimentosCSIC46980 Paterna, ValenciaSpain
| | - Fernández‐Crespo Emma
- Grupo de Bioquímica y Biotecnología, Área de Fisiología Vegetal, Departamento de Ciencias Agrarias y del Medio NaturalEscola Superior de Tecnologia i Ciències Experimentals, Universitat Jaume I12071 CastellónSpain
| | - García‐Agustín Pilar
- Grupo de Bioquímica y Biotecnología, Área de Fisiología Vegetal, Departamento de Ciencias Agrarias y del Medio NaturalEscola Superior de Tecnologia i Ciències Experimentals, Universitat Jaume I12071 CastellónSpain
| | - González‐Bosch Carmen
- Departamento de Bioquímica y Biología Molecular, Universitat de Valencia, Instituto de Agroquímica y Tecnología de AlimentosCSIC46980 Paterna, ValenciaSpain
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229
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Sanchez-Arcos C, Reichelt M, Gershenzon J, Kunert G. Modulation of Legume Defense Signaling Pathways by Native and Non-native Pea Aphid Clones. FRONTIERS IN PLANT SCIENCE 2016; 7:1872. [PMID: 28018405 PMCID: PMC5156717 DOI: 10.3389/fpls.2016.01872] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/24/2016] [Accepted: 11/28/2016] [Indexed: 05/25/2023]
Abstract
The pea aphid (Acyrthosiphon pisum) is a complex of at least 15 genetically different host races that are native to specific legume plants, but can all develop on the universal host plant Vicia faba. Despite much research, it is still unclear why pea aphid host races (biotypes) are able to colonize their native hosts while other host races are not. All aphids penetrate the plant and salivate into plant cells when they test plant suitability. Thus plants might react differently to the various pea aphid host races. To find out whether legume species vary in their defense responses to different pea aphid host races, we measured the amounts of salicylic acid (SA), the jasmonic acid-isoleucine conjugate (JA-Ile), other jasmonate precursors and derivatives, and abscisic acid (ABA) in four different species (Medicago sativa, Trifolium pratense, Pisum sativum, V. faba) after infestation by native and non-native pea aphid clones of various host races. Additionally, we assessed the performance of the clones on the four plant species. On M. sativa and T. pratense, non-native clones that were barely able to survive or reproduce, triggered a strong SA and JA-Ile response, whereas infestation with native clones led to lower levels of both phytohormones. On P. sativum, non-native clones, which survived or reproduced to a certain extent, induced fluctuating SA and JA-Ile levels, whereas the native clone triggered only a weak SA and JA-Ile response. On the universal host V. faba all aphid clones triggered only low SA levels initially, but induced clone-specific patterns of SA and JA-Ile later on. The levels of the active JA-Ile conjugate and of the other JA-pathway metabolites measured showed in many cases similar patterns, suggesting that the reduction in JA signaling was due to an effect upstream of OPDA. ABA levels were downregulated in all aphid clone-plant combinations and were therefore probably not decisive factors for aphid-plant compatibility. Our results suggest that A. pisum clones manipulate plant-defense signaling to their own advantage, and perform better on their native hosts due to their ability to modulate the SA- and JA-defense signaling pathways.
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Affiliation(s)
| | | | | | - Grit Kunert
- Department of Biochemistry, Max Planck Institute for Chemical EcologyJena, Germany
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230
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Jonckheere W, Dermauw W, Zhurov V, Wybouw N, Van den Bulcke J, Villarroel CA, Greenhalgh R, Grbić M, Schuurink RC, Tirry L, Baggerman G, Clark RM, Kant MR, Vanholme B, Menschaert G, Van Leeuwen T. The Salivary Protein Repertoire of the Polyphagous Spider Mite Tetranychus urticae: A Quest for Effectors. Mol Cell Proteomics 2016; 15:3594-3613. [PMID: 27703040 PMCID: PMC5141274 DOI: 10.1074/mcp.m116.058081] [Citation(s) in RCA: 71] [Impact Index Per Article: 8.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/12/2016] [Revised: 08/11/2016] [Indexed: 11/06/2022] Open
Abstract
The two-spotted spider mite Tetranychus urticae is an extremely polyphagous crop pest. Alongside an unparalleled detoxification potential for plant secondary metabolites, it has recently been shown that spider mites can attenuate or even suppress plant defenses. Salivary constituents, notably effectors, have been proposed to play an important role in manipulating plant defenses and might determine the outcome of plant-mite interactions. Here, the proteomic composition of saliva from T. urticae lines adapted to various host plants-bean, maize, soy, and tomato-was analyzed using a custom-developed feeding assay coupled with nano-LC tandem mass spectrometry. About 90 putative T. urticae salivary proteins were identified. Many are of unknown function, and in numerous cases belonging to multimembered gene families. RNAseq expression analysis revealed that many genes coding for these salivary proteins were highly expressed in the proterosoma, the mite body region that includes the salivary glands. A subset of genes encoding putative salivary proteins was selected for whole-mount in situ hybridization, and were found to be expressed in the anterior and dorsal podocephalic glands. Strikingly, host plant dependent expression was evident for putative salivary proteins, and was further studied in detail by micro-array based genome-wide expression profiling. This meta-analysis revealed for the first time the salivary protein repertoire of a phytophagous chelicerate. The availability of this salivary proteome will assist in unraveling the molecular interface between phytophagous mites and their host plants, and may ultimately facilitate the development of mite-resistant crops. Furthermore, the technique used in this study is a time- and resource-efficient method to examine the salivary protein composition of other small arthropods for which saliva or salivary glands cannot be isolated easily.
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Affiliation(s)
- Wim Jonckheere
- From the ‡Laboratory of Agrozoology, Department of Crop Protection, Faculty of Bioscience Engineering, Ghent University, Coupure links 653, 9000 Gent, Belgium
- §Department of Evolutionary Biology, Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam, Science Park 904, 1098 XH, Amsterdam, the Netherlands
| | - Wannes Dermauw
- From the ‡Laboratory of Agrozoology, Department of Crop Protection, Faculty of Bioscience Engineering, Ghent University, Coupure links 653, 9000 Gent, Belgium;
| | - Vladimir Zhurov
- ¶Department of Biology, The University of Western Ontario, London, ON, Canada N6A5B7
| | - Nicky Wybouw
- §Department of Evolutionary Biology, Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam, Science Park 904, 1098 XH, Amsterdam, the Netherlands
| | - Jan Van den Bulcke
- ‖UGCT - Woodlab-UGent, Department of Forest and Water Management, Faculty of Bioscience Engineering, Ghent University, Coupure links 653, 9000 Gent, Belgium
| | - Carlos A Villarroel
- **Department of Plant Physiology, Swammerdam Institute for Life Sciences, University of Amsterdam, Science Park 904, 1098 XH, Amsterdam, the Netherlands
- ‡‡Department of Population Biology, Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam, Science Park 904, 1098 XH, Amsterdam, the Netherlands
| | - Robert Greenhalgh
- §§Department of Biology, University of Utah, Salt Lake City 257 South 1400 East Utah 84112
| | - Mike Grbić
- ¶Department of Biology, The University of Western Ontario, London, ON, Canada N6A5B7
- ¶¶Instituto de Ciencias de la Vid y el Vino, 26006 Logrono, Spain
| | - Rob C Schuurink
- **Department of Plant Physiology, Swammerdam Institute for Life Sciences, University of Amsterdam, Science Park 904, 1098 XH, Amsterdam, the Netherlands
| | - Luc Tirry
- From the ‡Laboratory of Agrozoology, Department of Crop Protection, Faculty of Bioscience Engineering, Ghent University, Coupure links 653, 9000 Gent, Belgium
| | - Geert Baggerman
- ‖‖Center for Proteomics (CFP), University of Antwerp, Groenenborgerlaan 171, 2020 Antwerp, Belgium
- Flemish Institute for Technological Research (VITO), Boeretang 200, 2400 Mol, Belgium
| | - Richard M Clark
- §§Department of Biology, University of Utah, Salt Lake City 257 South 1400 East Utah 84112
- Center for Cell and Genome Science, University of Utah, Salt Lake City 257 South 1400 East Utah 84122
| | - Merijn R Kant
- ‡‡Department of Population Biology, Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam, Science Park 904, 1098 XH, Amsterdam, the Netherlands
| | - Bartel Vanholme
- Department of Plant Systems Biology, VIB, B-9052 Gent, Belgium
- Department of Plant Biotechnology and Bioinformatics, Ghent University, B-9052 Gent, Belgium
| | - Gerben Menschaert
- Department of Mathematical Modelling, Statistics and Bioinformatics, Ghent University, Coupure links 653, 9000 Gent, Belgium
| | - Thomas Van Leeuwen
- From the ‡Laboratory of Agrozoology, Department of Crop Protection, Faculty of Bioscience Engineering, Ghent University, Coupure links 653, 9000 Gent, Belgium;
- §Department of Evolutionary Biology, Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam, Science Park 904, 1098 XH, Amsterdam, the Netherlands
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231
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Arena GD, Ramos-González PL, Nunes MA, Ribeiro-Alves M, Camargo LEA, Kitajima EW, Machado MA, Freitas-Astúa J. Citrus leprosis virus C Infection Results in Hypersensitive-Like Response, Suppression of the JA/ET Plant Defense Pathway and Promotion of the Colonization of Its Mite Vector. FRONTIERS IN PLANT SCIENCE 2016; 7:1757. [PMID: 27933078 PMCID: PMC5122717 DOI: 10.3389/fpls.2016.01757] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/19/2016] [Accepted: 11/08/2016] [Indexed: 05/20/2023]
Abstract
Leprosis is a serious disease of citrus caused by Citrus leprosis virus C (CiLV-C, genus Cilevirus) whose transmission is mediated by false spider mites of the genus Brevipalpus. CiLV-C infection does not systemically spread in any of its known host plants, thus remaining restricted to local lesions around the feeding sites of viruliferous mites. To get insight into this unusual pathosystem, we evaluated the expression profiles of genes involved in defense mechanisms of Arabidopsis thaliana and Citrus sinensis upon infestation with non-viruliferous and viruliferous mites by using reverse-transcription qPCR. These results were analyzed together with the production of reactive oxygen species (ROS) and the appearance of dead cells as assessed by histochemical assays. After interaction with non-viruliferous mites, plants locally accumulated ROS and triggered the salicylic acid (SA) and jasmonate/ethylene (JA/ET) pathways. ERF branch of the JA/ET pathways was highly activated. In contrast, JA pathway genes were markedly suppressed upon the CiLV-C infection mediated by viruliferous mites. Viral infection also intensified the ROS burst and cell death, and enhanced the expression of genes involved in the RNA silencing mechanism and SA pathway. After 13 days of infestation of two sets of Arabidopsis plants with non-viruliferous and viruliferous mites, the number of mites in the CiLV-C infected Arabidopsis plants was significantly higher than in those infested with the non-viruliferous ones. Oviposition of the viruliferous mites occurred preferentially in the CiLV-C infected leaves. Based on these results, we postulated the first model of plant/Brevipalpus mite/cilevirus interaction in which cells surrounding the feeding sites of viruliferous mites typify the outcome of a hypersensitive-like response, whereas viral infection induces changes in the behavior of its vector.
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Affiliation(s)
- Gabriella D. Arena
- Laboratório de Biotecnologia de Citros, Centro APTA Citros Sylvio Moreira, Instituto Agronômico de CampinasSão Paulo, Brazil
- Escola Superior de Agricultura Luiz de Queiroz, Universidade de São PauloSão Paulo, Brazil
- Universidade Estadual de CampinasSão Paulo, Brazil
| | - Pedro L. Ramos-González
- Laboratório de Biotecnologia de Citros, Centro APTA Citros Sylvio Moreira, Instituto Agronômico de CampinasSão Paulo, Brazil
- Laboratório de Bioquímica Fitopatológica, Instituto BiológicoSão Paulo, Brazil
| | - Maria A. Nunes
- Laboratório de Biotecnologia de Citros, Centro APTA Citros Sylvio Moreira, Instituto Agronômico de CampinasSão Paulo, Brazil
| | | | - Luis E. A. Camargo
- Escola Superior de Agricultura Luiz de Queiroz, Universidade de São PauloSão Paulo, Brazil
| | - Elliot W. Kitajima
- Escola Superior de Agricultura Luiz de Queiroz, Universidade de São PauloSão Paulo, Brazil
| | - Marcos A. Machado
- Laboratório de Biotecnologia de Citros, Centro APTA Citros Sylvio Moreira, Instituto Agronômico de CampinasSão Paulo, Brazil
| | - Juliana Freitas-Astúa
- Laboratório de Bioquímica Fitopatológica, Instituto BiológicoSão Paulo, Brazil
- Embrapa Mandioca e FruticulturaCruz das Almas, Brazil
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232
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Dufour MC, Magnin N, Dumas B, Vergnes S, Corio-Costet MF. High-throughput gene-expression quantification of grapevine defense responses in the field using microfluidic dynamic arrays. BMC Genomics 2016; 17:957. [PMID: 27875995 PMCID: PMC5120521 DOI: 10.1186/s12864-016-3304-z] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/09/2016] [Accepted: 11/16/2016] [Indexed: 11/28/2022] Open
Abstract
BACKGROUND The fight against grapevine diseases due to biotrophic pathogens usually requires the massive use of chemical fungicides with harmful environmental effects. An alternative strategy could be the use of compounds able to stimulate plant immune responses which significantly limit the development of pathogens in laboratory conditions. However, the efficiency of this strategy in natura is still insufficient to be included in pest management programs. To understand and to improve the mode of action of plant defense stimulators in the field, it is essential to develop reliable tools that describe the resistance status of the plant upon treatment. RESULTS We have developed a pioneering tool ("NeoViGen96" chip) based on a microfluidic dynamic array platform allowing the expression profiling of 85 defense-related grapevine genes in 90 cDNA preparations in a 4 h single run. Two defense inducers, benzothiadiazole (BTH) and fosetyl-aluminum (FOS), have been tested in natura using the "NeoViGen96" chip as well as their efficacy against downy mildew. BTH-induced grapevine resistance is accompanied by the induction of PR protein genes (PR1, PR2 and PR3), genes coding key enzymes in the phenylpropanoid pathway (PAL and STS), a GST gene coding an enzyme involved in the redox status and an ACC gene involved in the ethylene pathway. FOS, a phosphonate known to possess a toxic activity against pathogens and an inducing effect on defense genes provided a better grapevine protection than BTH. Its mode of action was probably strictly due to its fungicide effect at high concentrations because treatment did not induce significant change in the expression level of selected defense-related genes. CONCLUSIONS The NeoViGen96" chip assesses the effectiveness of plant defense inducers on grapevine in vineyard with an excellent reproducibility. A single run with this system (4 h and 1,500 €), corresponds to 180 qPCR plates with conventional Q-PCR assays (Stragene system, 270 h and 9,000 €) thus a throughput 60-70 times higher and 6 times cheaper. Grapevine responses after BTH elicitation in the vineyard were similar to those obtained in laboratory conditions, whereas our results suggest that the protective effect of FOS against downy mildew in the vineyard was only due to its fungicide activity since no activity on plant defense genes was observed. This tool provides better understanding of how the grapevine replies to elicitation in its natural environment and how the elicitor potential can be used to reduce chemical fungicide inputs.
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Affiliation(s)
- Marie-Cécile Dufour
- INRA, UMR Santé et Agroécologie du vignoble (SAVE-1065), CS 20032, ISVV, 33882 Villenave d’Ornon, CEDEX France
| | - Noël Magnin
- INRA, UMR Santé et Agroécologie du vignoble (SAVE-1065), CS 20032, ISVV, 33882 Villenave d’Ornon, CEDEX France
| | - Bernard Dumas
- Université de Toulouse, UPS, UMR 5546, Laboratoire de Recherche en Sciences Végétales, BP 42617, Auzeville, F-31326 Castanet-Tolosan, France
- CNRS, UMR 5546, BP 42617, F-31326 Castanet-Tolosan, France
| | - Sophie Vergnes
- Université de Toulouse, UPS, UMR 5546, Laboratoire de Recherche en Sciences Végétales, BP 42617, Auzeville, F-31326 Castanet-Tolosan, France
- CNRS, UMR 5546, BP 42617, F-31326 Castanet-Tolosan, France
| | - Marie-France Corio-Costet
- INRA, UMR Santé et Agroécologie du vignoble (SAVE-1065), CS 20032, ISVV, 33882 Villenave d’Ornon, CEDEX France
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233
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Imran QM, Falak N, Hussain A, Mun BG, Sharma A, Lee SU, Kim KM, Yun BW. Nitric Oxide Responsive Heavy Metal-Associated Gene AtHMAD1 Contributes to Development and Disease Resistance in Arabidopsis thaliana. FRONTIERS IN PLANT SCIENCE 2016; 7:1712. [PMID: 27917181 PMCID: PMC5116471 DOI: 10.3389/fpls.2016.01712] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/22/2016] [Accepted: 10/31/2016] [Indexed: 05/29/2023]
Abstract
Exposure of plants to different biotic and abiotic stress condition instigates significant change in the cellular redox status; resulting in the elevation of reactive nitrogen species that play signaling role in mediating defense responses. Heavy metal associated (HMA) domain containing genes are required for spatio-temporal transportation of metal ions that bind with various enzymes and co-factors within the cell. To uncover the underlying mechanisms mediated by AtHMA genes, we identified 14 Arabidopsis HMA genes that were differentially expressed in response to nitrosative stress through RNA-seq analysis. Of those 14 genes, the expression of eight HMA genes was significantly increased, whereas that of six genes was significantly reduced. We further validated the RNA-seq results through quantitative real-time PCR analysis. Gene ontology analysis revealed the involvement of these genes in biological processes such as hemostasis and transport. The majority of these nitric oxide (NO)-responsive AtHMA gene products are carrier/transport proteins. AtHMAD1 (At1g51090) showed the highest fold change to S-nitrosocystein. We therefore, further investigated its role in oxidative and nitrosative mediated stress conditions and found that AtHMAD1 has antagonistic role in shoot and root growth. Characterization of AtHMAD1 through functional genomics showed that the knock out mutant athmad1 plants were resistant to virulent Pseudomonas syringae (DC3000) and showed early induction and high transcript accumulation of pathogenesis related gene. Furthermore, inoculation of athamd1 with avirulent strain of the same bacteria showed negative regulation of R-gene mediated resistance. These results were supported by hypersensitive cell death response and cell death induced electrolyte leakage. AtHMAD1 was also observed to negatively regulate systemic acquired resistance SAR as the KO mutant showed induction of SAR marker genes. Overall, these results imply that NO-responsive AtHMA domain containing genes may play an important role in plant development and immunity.
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Affiliation(s)
- Q. Muhammad Imran
- Laboratory of Plant Functional Genomics, School of Applied Biosciences, Kyungpook National UniversityDaegu, South Korea
| | - Noreen Falak
- Laboratory of Plant Functional Genomics, School of Applied Biosciences, Kyungpook National UniversityDaegu, South Korea
| | - Adil Hussain
- Department of Agriculture, Abdul Wali Khan UniversityMardan, Pakistan
| | - Bong-Gyu Mun
- Laboratory of Plant Functional Genomics, School of Applied Biosciences, Kyungpook National UniversityDaegu, South Korea
| | - Arti Sharma
- Laboratory of Plant Functional Genomics, School of Applied Biosciences, Kyungpook National UniversityDaegu, South Korea
| | - Sang-Uk Lee
- Laboratory of Plant Functional Genomics, School of Applied Biosciences, Kyungpook National UniversityDaegu, South Korea
| | - Kyung-Min Kim
- Laboratory of Plant Molecular Breeding, School of Applied Biosciences, Kyungpook National UniversityDaegu, South Korea
| | - Byung-Wook Yun
- Laboratory of Plant Functional Genomics, School of Applied Biosciences, Kyungpook National UniversityDaegu, South Korea
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234
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Abstract
As sessile organisms, plants are continuously exposed to various environmental stresses. In contrast to the controlled conditions employed in many researches, more than one or more abiotic and/or biotic stresses simultaneously occur and highly impact growth of plants and crops in the field environments. Therefore, an urgent need to generate crops with enhanced tolerance to stress combinations exists. Researchers, however, focused on the mechanisms underlying acclimation of plants to combined stresses only in recent studies. Plant hormones might be a key regulator of the tailored responses of plants to different stress combinations. Co-ordination between different hormone signaling, or hormone signaling and other pathways such as ROS regulatory mechanisms could be flexible, being altered by timing and types of stresses, and could be different depending on plant species under the stress combinations. In this review, update on recent studies focusing on complex-mode of hormone signaling under stress combinations will be provided.
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Affiliation(s)
- Nobuhiro Suzuki
- Department of Materials and Life Sciences, Faculty of Science and Technology, Sophia University, Kioi-cho, Chiyoda-ku, Tokyo, Japan
- CONTACT Nobuhiro Suzuki .
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235
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D'Agui H, Fowler W, Lim SL, Enright N, He T. Phenotypic variation and differentiated gene expression of Australian plants in response to declining rainfall. ROYAL SOCIETY OPEN SCIENCE 2016; 3:160637. [PMID: 28018654 PMCID: PMC5180152 DOI: 10.1098/rsos.160637] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/26/2016] [Accepted: 10/18/2016] [Indexed: 05/26/2023]
Abstract
Declining rainfall is projected to have negative impacts on the demographic performance of plant species. Little is known about the adaptive capacity of species to respond to drying climates, and whether adaptation can keep pace with climate change. In fire-prone ecosystems, episodic recruitment of perennial plant species in the first year post-fire imposes a specific selection environment, offering a unique opportunity to quantify the scope for adaptive response to climate change. We examined the growth of seedlings of four fire-killed species under control and drought conditions for seeds from populations established in years following fire receiving average-to-above-average winter rainfall, or well-below-average winter rainfall. We show that offspring of plants that had established under drought had more efficient water uptake, and/or stored more water per unit biomass, or developed denser leaves, and all maintained higher survival in simulated drought than did offspring of plants established in average annual rainfall years. Adaptive phenotypic responses were not consistent across all traits and species, while plants that had established under severe drought or established in years with average-to-above-average rainfall had an overall different physiological response when growing either with or without water constraints. Seedlings descended from plants established under severe drought also had elevated gene expression in key pathways relating to stress response. Our results demonstrate the capacity for rapid adaptation to climate change through phenotypic variation and regulation of gene expression. However, effective and rapid adaptation to climate change may vary among species depending on their capacity to maintain robust populations under multiple stresses.
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Affiliation(s)
- Haylee D'Agui
- Department of Environment and Agriculture, Curtin University, Perth, Western Australia 6845, Australia
| | - William Fowler
- Department of Environment and Agriculture, Curtin University, Perth, Western Australia 6845, Australia
| | - Sim Lin Lim
- Department of Environment and Agriculture, Curtin University, Perth, Western Australia 6845, Australia
| | - Neal Enright
- School of Veterinary and Life Sciences, Murdoch University, Perth, Western Australia 6150, Australia
| | - Tianhua He
- Department of Environment and Agriculture, Curtin University, Perth, Western Australia 6845, Australia
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236
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Takács Z, Poór P, Tari I. Comparison of polyamine metabolism in tomato plants exposed to different concentrations of salicylic acid under light or dark conditions. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2016; 108:266-278. [PMID: 27474934 DOI: 10.1016/j.plaphy.2016.07.020] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/01/2016] [Revised: 07/19/2016] [Accepted: 07/19/2016] [Indexed: 05/27/2023]
Abstract
In this study the effect of exogenous 0.1 mM and 1 mM salicylic acid (SA) treatments were investigated on polyamine (PA) metabolism in tomato (Solanum lycopersicum L. cv. Ailsa Craig) leaves in illuminated or dark environments. The former proved to be sublethal and the latter lethal concentration for tomato leaf tissues. While PA biosynthetic genes, arginine- and ornitine decarboxylases or spermidine- and spermine synthases were highly up-regulated by 1 mM SA, the enzymes participating in PA catabolism, diamine- (DAOs, EC 1.4.3.6) and polyamine oxidases (PAOs, EC 1.5.3.3) displayed higher transcript abundance and enzyme activity at 0.1 mM SA. As a result, putrescine and spermine content but not that of spermidine increased after 1 mM SA application, which proved to be higher in the dark than in the light. H2O2 content produced on the effect of 1 mM SA was significantly higher than at 0.1 mM SA in the light. Since there was no coincidence between H2O2 accumulation and terminal PA catabolism, reactive oxygen species produced by photosynthesis and by other sources had more pronounced effect on H2O2 generation at tissue level than DAOs and PAOs. Accordingly, H2O2 in the absence of NO accumulation contributed to the initiation of defence reactions after 0.1 mM SA treatment, while high SA concentration generated simultaneous increase in H2O2 and NO production in the light, which induced cell death within 24 h in illuminated leaves. However, the appearance of necrotic lesions was delayed in the absence of NO if these plants were kept in darkness.
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Affiliation(s)
- Zoltán Takács
- Department of Plant Biology, University of Szeged, H-6726 Szeged, Közép Fasor 52., Hungary.
| | - Péter Poór
- Department of Plant Biology, University of Szeged, H-6726 Szeged, Közép Fasor 52., Hungary.
| | - Irma Tari
- Department of Plant Biology, University of Szeged, H-6726 Szeged, Közép Fasor 52., Hungary.
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237
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Kroes A, Broekgaarden C, Castellanos Uribe M, May S, van Loon JJA, Dicke M. Brevicoryne brassicae aphids interfere with transcriptome responses of Arabidopsis thaliana to feeding by Plutella xylostella caterpillars in a density-dependent manner. Oecologia 2016; 183:107-120. [PMID: 27771762 PMCID: PMC5239811 DOI: 10.1007/s00442-016-3758-3] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/10/2016] [Accepted: 10/16/2016] [Indexed: 01/09/2023]
Abstract
Plants are commonly attacked by multiple herbivorous species. Yet, little is known about transcriptional patterns underlying plant responses to multiple insect attackers feeding simultaneously. Here, we assessed transcriptomic responses of Arabidopsis thaliana plants to simultaneous feeding by Plutella xylostella caterpillars and Brevicoryne brassicae aphids in comparison to plants infested by P. xylostella caterpillars alone, using microarray analysis. We particularly investigated how aphid feeding interferes with the transcriptomic response to P. xylostella caterpillars and whether this interference is dependent on aphid density and time since aphid attack. Various JA-responsive genes were up-regulated in response to feeding by P. xylostella caterpillars. The additional presence of aphids, both at low and high densities, clearly affected the transcriptional plant response to caterpillars. Interestingly, some important modulators of plant defense signalling, including WRKY transcription factor genes and ABA-dependent genes, were differentially induced in response to simultaneous aphid feeding at low or high density compared with responses to P. xylostella caterpillars feeding alone. Furthermore, aphids affected the P. xylostella-induced transcriptomic response in a density-dependent manner, which caused an acceleration in plant response against dual insect attack at high aphid density compared to dual insect attack at low aphid density. In conclusion, our study provides evidence that aphids influence the caterpillar-induced transcriptional response of A. thaliana in a density-dependent manner. It highlights the importance of addressing insect density to understand how plant responses to single attackers interfere with responses to other attackers and thus underlines the importance of the dynamics of transcriptional plant responses to multiple herbivory.
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Affiliation(s)
- Anneke Kroes
- Laboratory of Entomology, Wageningen University, P.O. Box 16, 6700 AA, Wageningen, The Netherlands.
| | - Colette Broekgaarden
- Plant-Microbe Interactions, Department of Biology, Faculty of Science, Utrecht University, 3508 TB, Utrecht, The Netherlands
| | - Marcos Castellanos Uribe
- Nottingham Arabidopsis Stock Centre, University of Nottingham, School of Biosciences, Loughborough, LE12 5RD, UK
| | - Sean May
- Nottingham Arabidopsis Stock Centre, University of Nottingham, School of Biosciences, Loughborough, LE12 5RD, UK
| | - Joop J A van Loon
- Laboratory of Entomology, Wageningen University, P.O. Box 16, 6700 AA, Wageningen, The Netherlands
| | - Marcel Dicke
- Laboratory of Entomology, Wageningen University, P.O. Box 16, 6700 AA, Wageningen, The Netherlands
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238
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Zandalinas SI, Balfagón D, Arbona V, Gómez-Cadenas A, Inupakutika MA, Mittler R. ABA is required for the accumulation of APX1 and MBF1c during a combination of water deficit and heat stress. JOURNAL OF EXPERIMENTAL BOTANY 2016; 67:5381-5390. [PMID: 27497287 PMCID: PMC5049388 DOI: 10.1093/jxb/erw299] [Citation(s) in RCA: 100] [Impact Index Per Article: 12.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/20/2023]
Abstract
Abscisic acid (ABA) plays a key role in plant acclimation to abiotic stress. Although recent studies suggested that ABA could also be important for plant acclimation to a combination of abiotic stresses, its role in this response is currently unknown. Here we studied the response of mutants impaired in ABA signalling (abi1-1) and biosynthesis (aba1-1) to a combination of water deficit and heat stress. Both mutants displayed reduced growth, biomass, and survival when subjected to stress combination. Focusing on abi1-1, we found that although its stomata had an impaired response to water deficit, remaining significantly more open than wild type, its stomatal aperture was surprisingly reduced when subjected to the stress combination. Stomatal closure during stress combination in abi1-1 was accompanied by higher levels of H2O2 in leaves, suggesting that H2O2 might play a role in this response. In contrast to the almost wild-type stomatal closure phenotype of abi1-1 during stress combination, the accumulation of ascorbate peroxidase 1 and multiprotein bridging factor 1c proteins, required for acclimation to a combination of water deficit and heat stress, was significantly reduced in abi1-1 Our findings reveal a key function for ABA in regulating the accumulation of essential proteins during a combination of water deficit and heat stress.
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Affiliation(s)
- Sara I Zandalinas
- Departamento de Ciencias Agrarias y del Medio Natural, Universitat Jaume I, Campus Riu Sec, E- 12071 Castello de la Plana, Spain
| | - Damián Balfagón
- Departamento de Ciencias Agrarias y del Medio Natural, Universitat Jaume I, Campus Riu Sec, E- 12071 Castello de la Plana, Spain
| | - Vicent Arbona
- Departamento de Ciencias Agrarias y del Medio Natural, Universitat Jaume I, Campus Riu Sec, E- 12071 Castello de la Plana, Spain
| | - Aurelio Gómez-Cadenas
- Departamento de Ciencias Agrarias y del Medio Natural, Universitat Jaume I, Campus Riu Sec, E- 12071 Castello de la Plana, Spain
| | - Madhuri A Inupakutika
- Department of Biological Sciences, College of Arts and Sciences, University of North Texas, 1155 Union Circle #305220, Denton, TX 76203-5017, USA
| | - Ron Mittler
- Department of Biological Sciences, College of Arts and Sciences, University of North Texas, 1155 Union Circle #305220, Denton, TX 76203-5017, USA
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239
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Fang Y, Mei H, Zhou B, Xiao X, Yang M, Huang Y, Long X, Hu S, Tang C. De novo Transcriptome Analysis Reveals Distinct Defense Mechanisms by Young and Mature Leaves of Hevea brasiliensis (Para Rubber Tree). Sci Rep 2016; 6:33151. [PMID: 27619402 PMCID: PMC5020607 DOI: 10.1038/srep33151] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2016] [Accepted: 08/22/2016] [Indexed: 12/04/2022] Open
Abstract
Along with changes in morphology in the course of maturation, leaves of Hevea brasiliensis become more resistant to leaf diseases, including the South American Leaf Blight (SALB), a devastating fungal disease of this economically important tree species. To understand the underlying mechanisms of this defense, and to identify the candidate genes involved, we sequenced the Hevea leaf transcriptome at four developmental stages (I to IV) by Illumina sequencing. A total of 62.6 million high-quality reads were generated, and assembled into 98,796 unique transcripts. We identified 3,905 differentially expressed genes implicated in leaf development, 67.8% (2,651) of which were during the transition to leaf maturation. The genes involved in cyanogenic metabolism, lignin and anthocyanin biosynthesis were noteworthy for their distinct patterns of expression between developing leaves (stages I to III) and mature leaves (stage IV), and the correlation with the change in resistance to SALB and the Oidium/Colletotrichum leaf fall. The results provide a first profile of the molecular events that relate to the dynamics of leaf morphology and defense strategies during Hevea leaf development. This dataset is beneficial to devising strategies to engineer resistance to leaf diseases as well as other in-depth studies in Hevea tree.
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Affiliation(s)
- Yongjun Fang
- Rubber Research Institute, Chinese Academy of Tropical Agricultural Sciences, Danzhou 571737, Hainan, China
| | - Hailiang Mei
- CAS Key Laboratory of Genome Sciences and Information, Beijing Institute of Genomics, Chinese Academy of Sciences, Beijing 100101, China.,University of Chinese Academy of Sciences, Beijing 100049, China
| | - Binhui Zhou
- Rubber Research Institute, Chinese Academy of Tropical Agricultural Sciences, Danzhou 571737, Hainan, China
| | - Xiaohu Xiao
- Rubber Research Institute, Chinese Academy of Tropical Agricultural Sciences, Danzhou 571737, Hainan, China
| | - Meng Yang
- CAS Key Laboratory of Genome Sciences and Information, Beijing Institute of Genomics, Chinese Academy of Sciences, Beijing 100101, China
| | - Yacheng Huang
- Rubber Research Institute, Chinese Academy of Tropical Agricultural Sciences, Danzhou 571737, Hainan, China
| | - Xiangyu Long
- Rubber Research Institute, Chinese Academy of Tropical Agricultural Sciences, Danzhou 571737, Hainan, China
| | - Songnian Hu
- CAS Key Laboratory of Genome Sciences and Information, Beijing Institute of Genomics, Chinese Academy of Sciences, Beijing 100101, China
| | - Chaorong Tang
- Rubber Research Institute, Chinese Academy of Tropical Agricultural Sciences, Danzhou 571737, Hainan, China
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240
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Sharma A, Hussain A, Mun BG, Imran QM, Falak N, Lee SU, Kim JY, Hong JK, Loake GJ, Ali A, Yun BW. Comprehensive analysis of plant rapid alkalization factor (RALF) genes. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2016; 106:82-90. [PMID: 27155375 DOI: 10.1016/j.plaphy.2016.03.037] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/11/2016] [Revised: 03/14/2016] [Accepted: 03/27/2016] [Indexed: 05/04/2023]
Abstract
Receptor mediated signal carriers play a critical role in the regulation of plant defense and development. Rapid alkalization factor (RALF) proteins potentially comprise important signaling components which may have a key role in plant biology. The RALF gene family contains large number of genes in several plant species, however, only a few RALF genes have been characterized to date. In this study, an extensive database search identified 39, 43, 34 and 18 RALF genes in Arabidopsis, rice, maize and soybean, respectively. These RALF genes were found to be highly conserved across the 4 plant species. A comprehensive analysis including the chromosomal location, gene structure, subcellular location, conserved motifs, protein structure, protein-ligand interaction and promoter analysis was performed. RALF genes from four plant species were divided into 7 groups based on phylogenetic analysis. In silico expression analysis of these genes, using microarray and EST data, revealed that these genes exhibit a variety of expression patterns. Furthermore, RALF genes showed distinct expression patterns of transcript accumulation in vivo following nitrosative and oxidative stresses in Arabidopsis. Predicted interaction between RALF and heme ligand also showed that RALF proteins may contribute towards transporting or scavenging oxygen moieties. This suggests a possible role for RALF genes during changes in cellular redox status. Collectively, our data provides a valuable resource to prime future research in the role of RALF genes in plant growth and development.
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Affiliation(s)
- Arti Sharma
- School of Applied Biosciences, Kyungpook National University, Daegu, Republic of Korea.
| | - Adil Hussain
- School of Applied Biosciences, Kyungpook National University, Daegu, Republic of Korea; Department of Agriculture, Abdul Wali Khan University, Mardan, Pakistan.
| | - Bong-Gyu Mun
- School of Applied Biosciences, Kyungpook National University, Daegu, Republic of Korea.
| | - Qari Muhammad Imran
- School of Applied Biosciences, Kyungpook National University, Daegu, Republic of Korea.
| | - Noreen Falak
- School of Applied Biosciences, Kyungpook National University, Daegu, Republic of Korea.
| | - Sang-Uk Lee
- School of Applied Biosciences, Kyungpook National University, Daegu, Republic of Korea.
| | - Jae Young Kim
- School of Applied Biosciences, Kyungpook National University, Daegu, Republic of Korea.
| | - Jeum Kyu Hong
- Department of Horticultural Science, Gyeongnam National University of Science and Technology (GNTech), Jinju, Republic of Korea.
| | - Gary John Loake
- Institute of Molecular Plant Sciences, The University of Edinburgh, United Kingdom.
| | - Asad Ali
- Department of Plant Pathology, The University of Agriculture, Peshawar, Pakistan.
| | - Byung-Wook Yun
- School of Applied Biosciences, Kyungpook National University, Daegu, Republic of Korea.
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241
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Toljamo A, Blande D, Kärenlampi S, Kokko H. Reprogramming of Strawberry (Fragaria vesca) Root Transcriptome in Response to Phytophthora cactorum. PLoS One 2016; 11:e0161078. [PMID: 27518577 PMCID: PMC4982697 DOI: 10.1371/journal.pone.0161078] [Citation(s) in RCA: 29] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2016] [Accepted: 07/29/2016] [Indexed: 01/17/2023] Open
Abstract
Crown rot (Phytophthora cactorum) causes significant economic losses in strawberry production. The best control strategy would be to use resistant cultivars, but polygenically inherited resistance makes the breeding of the garden strawberry (Fragaria × ananassa) challenging. The diploid wild strawberry Fragaria vesca Hawaii 4 genotype was shown previously to have resistance against crown rot. To explore the resistance mechanisms, we inoculated the roots of Hawaii 4 with P. cactorum in a novel in vitro hydroponic system to minimize interference caused by other microbes. Major reprogramming of the root transcriptome occurred, involving 30% of the genes. The surveillance system of the plant shifted from the development mode to the defense mode. Furthermore, the immune responses as well as many genes involved in the biosynthesis of the defense hormones jasmonic acid, ethylene and salicylic acid were up-regulated. Several major allergen-like genes encoding PR-10 proteins were highly expressed in the inoculated plants, suggesting that they also have a crucial role in the defense responses against P. cactorum. Additionally, flavonoids and terpenoids may be of vital importance, as several genes involved in their biosynthesis were up-regulated. The cell wall biosynthesis and developmental processes were down-regulated, possibly as a result of the down-regulation of the key genes involved in the biosynthesis of growth-promoting hormones brassinosteroids and auxin. Of particular interest was the expression of potential resistance genes in the recently identified P. cactorum resistance locus RPc-1. These new findings help to target the breeding efforts aiming at more resistant strawberry cultivars.
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Affiliation(s)
- Anna Toljamo
- Department of Environmental and Biological Sciences, University of Eastern Finland, Kuopio, Finland
| | - Daniel Blande
- Department of Environmental and Biological Sciences, University of Eastern Finland, Kuopio, Finland
| | - Sirpa Kärenlampi
- Department of Environmental and Biological Sciences, University of Eastern Finland, Kuopio, Finland
| | - Harri Kokko
- Department of Environmental and Biological Sciences, University of Eastern Finland, Kuopio, Finland
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242
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Biere A, Goverse A. Plant-Mediated Systemic Interactions Between Pathogens, Parasitic Nematodes, and Herbivores Above- and Belowground. ANNUAL REVIEW OF PHYTOPATHOLOGY 2016; 54:499-527. [PMID: 27359367 DOI: 10.1146/annurev-phyto-080615-100245] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
Plants are important mediators of interactions between aboveground (AG) and belowground (BG) pathogens, arthropod herbivores, and nematodes (phytophages). We highlight recent progress in our understanding of within- and cross-compartment plant responses to these groups of phytophages in terms of altered resource dynamics and defense signaling and activation. We review studies documenting the outcome of cross-compartment interactions between these phytophage groups and show patterns of cross-compartment facilitation as well as cross-compartment induced resistance. Studies involving soilborne pathogens and foliar nematodes are scant. We further highlight the important role of defense signaling loops between shoots and roots to activate a full resistance complement. Moreover, manipulation of such loops by phytophages affects systemic interactions with other plant feeders. Finally, cross-compartment-induced changes in root defenses and root exudates extend systemic defense loops into the rhizosphere, enhancing or reducing recruitment of microbes that induce systemic resistance but also affecting interactions with root-feeding phytophages.
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Affiliation(s)
- Arjen Biere
- Department of Terrestrial Ecology, Netherlands Institute of Ecology, NIOO-KNAW, 6708 PB Wageningen, The Netherlands;
| | - Aska Goverse
- Lab of Nematology, Department of Plant Sciences, Wageningen University, 6700 PB Wageningen, The Netherlands
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Deleris A, Halter T, Navarro L. DNA Methylation and Demethylation in Plant Immunity. ANNUAL REVIEW OF PHYTOPATHOLOGY 2016; 54:579-603. [PMID: 27491436 DOI: 10.1146/annurev-phyto-080615-100308] [Citation(s) in RCA: 77] [Impact Index Per Article: 9.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/19/2023]
Abstract
Detection of plant and animal pathogens triggers a massive transcriptional reprogramming, which is directed by chromatin-based processes, and ultimately results in antimicrobial immunity. Although the implication of histone modifications in orchestrating biotic stress-induced transcriptional reprogramming has been well characterized, very little was known, until recently, about the role of DNA methylation and demethylation in this process. In this review, we summarize recent findings on the dynamics and biological relevance of DNA methylation and demethylation in plant immunity against nonviral pathogens. In particular, we report the implications of these epigenetic regulatory processes in the transcriptional and co-transcriptional control of immune-responsive genes and discuss their relevance in fine-tuning antimicrobial immune responses. Finally, we discuss the possible yet elusive role of DNA methylation and demethylation in systemic immune responses, transgenerational immune priming, and de novo epiallelism, which could be adaptive.
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Affiliation(s)
- A Deleris
- Institut de Biologie de l'Ecole Normale Supérieure, Centre National de la Recherche Scientifique, Unité Mixte de Recherche 8197, Institut National de la Santé et de la Recherche Médicale, Unité 1024, PSL Research University, 75005 Paris, France;
| | - T Halter
- Institut de Biologie de l'Ecole Normale Supérieure, Centre National de la Recherche Scientifique, Unité Mixte de Recherche 8197, Institut National de la Santé et de la Recherche Médicale, Unité 1024, PSL Research University, 75005 Paris, France;
| | - L Navarro
- Institut de Biologie de l'Ecole Normale Supérieure, Centre National de la Recherche Scientifique, Unité Mixte de Recherche 8197, Institut National de la Santé et de la Recherche Médicale, Unité 1024, PSL Research University, 75005 Paris, France;
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244
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Nguyen D, Rieu I, Mariani C, van Dam NM. How plants handle multiple stresses: hormonal interactions underlying responses to abiotic stress and insect herbivory. PLANT MOLECULAR BIOLOGY 2016; 91:727-40. [PMID: 27095445 PMCID: PMC4932144 DOI: 10.1007/s11103-016-0481-8] [Citation(s) in RCA: 145] [Impact Index Per Article: 18.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/31/2015] [Accepted: 04/09/2016] [Indexed: 05/18/2023]
Abstract
Adaptive plant responses to specific abiotic stresses or biotic agents are fine-tuned by a network of hormonal signaling cascades, including abscisic acid (ABA), ethylene, jasmonic acid (JA) and salicylic acid. Moreover, hormonal cross-talk modulates plant responses to abiotic stresses and defenses against insect herbivores when they occur simultaneously. How such interactions affect plant responses under multiple stresses, however, is less understood, even though this may frequently occur in natural environments. Here, we review our current knowledge on how hormonal signaling regulates abiotic stress responses and defenses against insects, and discuss the few recent studies that attempted to dissect hormonal interactions occurring under simultaneous abiotic stress and herbivory. Based on this we hypothesize that drought stress enhances insect resistance due to synergistic interactions between JA and ABA signaling. Responses to flooding or waterlogging involve ethylene signaling, which likely reduces plant resistance to chewing herbivores due to its negative cross-talk with JA. However, the outcome of interactions between biotic and abiotic stress signaling is often plant and/or insect species-dependent and cannot simply be predicted based on general knowledge on the involvement of signaling pathways in single stress responses. More experimental data on non-model plant and insect species are needed to reveal general patterns and better understand the molecular mechanisms allowing plants to optimize their responses in complex environments.
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Affiliation(s)
- Duy Nguyen
- Molecular Plant Physiology, Institute for Water and Wetland Research (IWWR), Radboud University, PO Box 9010, 6500 GL, Nijmegen, The Netherlands
| | - Ivo Rieu
- Molecular Plant Physiology, Institute for Water and Wetland Research (IWWR), Radboud University, PO Box 9010, 6500 GL, Nijmegen, The Netherlands
| | - Celestina Mariani
- Molecular Plant Physiology, Institute for Water and Wetland Research (IWWR), Radboud University, PO Box 9010, 6500 GL, Nijmegen, The Netherlands
| | - Nicole M van Dam
- Molecular Plant Physiology, Institute for Water and Wetland Research (IWWR), Radboud University, PO Box 9010, 6500 GL, Nijmegen, The Netherlands.
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Deutscher Platz 5e, 04103, Leipzig, Germany.
- Institute of Ecology, Friedrich Schiller University Jena, Dornburger-Str. 159, 07743, Jena, Germany.
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245
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Goossens J, Fernández-Calvo P, Schweizer F, Goossens A. Jasmonates: signal transduction components and their roles in environmental stress responses. PLANT MOLECULAR BIOLOGY 2016; 68:1333-1347. [PMID: 27927998 DOI: 10.1093/jxb/erw440] [Citation(s) in RCA: 36] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/04/2023]
Abstract
Jasmonates, oxylipin-type plant hormones, are implicated in diverse aspects of plant growth development and interaction with the environment. Following diverse developmental and environmental cues, jasmonate is produced, conjugated to the amino acid isoleucine and perceived by a co-receptor complex composed of the Jasmonate ZIM-domain (JAZ) repressor proteins and an E3 ubiquitin ligase complex containing the F-box CORONATINE INSENSITIVE 1 (COI1). This event triggers the degradation of the JAZ proteins and the release of numerous transcription factors, including MYC2 and its homologues, which are otherwise bound and inhibited by the JAZ repressors. Here, we will review the role of the COI1, JAZ and MYC2 proteins in the interaction of the plant with its environment, illustrating the significance of jasmonate signalling, and of the proteins involved, for responses to both biotic stresses caused by insects and numerous microbial pathogens and abiotic stresses caused by adverse climatic conditions. It has also become evident that crosstalk with other hormone signals, as well as light and clock signals, plays an important role in the control and fine-tuning of these stress responses. Finally, we will discuss how several pathogens exploit the jasmonate perception and early signalling machinery to decoy the plants defence systems.
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Affiliation(s)
- Jonas Goossens
- Department of Plant Systems Biology, Flanders Institute for Biotechnology, Technologiepark 927, 9052, Ghent, Belgium
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Technologiepark 927, 9052, Ghent, Belgium
| | - Patricia Fernández-Calvo
- Department of Plant Systems Biology, Flanders Institute for Biotechnology, Technologiepark 927, 9052, Ghent, Belgium
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Technologiepark 927, 9052, Ghent, Belgium
| | - Fabian Schweizer
- Department of Plant Systems Biology, Flanders Institute for Biotechnology, Technologiepark 927, 9052, Ghent, Belgium
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Technologiepark 927, 9052, Ghent, Belgium
| | - Alain Goossens
- Department of Plant Systems Biology, Flanders Institute for Biotechnology, Technologiepark 927, 9052, Ghent, Belgium.
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Technologiepark 927, 9052, Ghent, Belgium.
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246
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Goossens J, Fernández-Calvo P, Schweizer F, Goossens A. Jasmonates: signal transduction components and their roles in environmental stress responses. PLANT MOLECULAR BIOLOGY 2016; 91:673-89. [PMID: 27086135 DOI: 10.1007/s11103-016-0480-9] [Citation(s) in RCA: 121] [Impact Index Per Article: 15.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/23/2015] [Accepted: 04/09/2016] [Indexed: 05/20/2023]
Abstract
Jasmonates, oxylipin-type plant hormones, are implicated in diverse aspects of plant growth development and interaction with the environment. Following diverse developmental and environmental cues, jasmonate is produced, conjugated to the amino acid isoleucine and perceived by a co-receptor complex composed of the Jasmonate ZIM-domain (JAZ) repressor proteins and an E3 ubiquitin ligase complex containing the F-box CORONATINE INSENSITIVE 1 (COI1). This event triggers the degradation of the JAZ proteins and the release of numerous transcription factors, including MYC2 and its homologues, which are otherwise bound and inhibited by the JAZ repressors. Here, we will review the role of the COI1, JAZ and MYC2 proteins in the interaction of the plant with its environment, illustrating the significance of jasmonate signalling, and of the proteins involved, for responses to both biotic stresses caused by insects and numerous microbial pathogens and abiotic stresses caused by adverse climatic conditions. It has also become evident that crosstalk with other hormone signals, as well as light and clock signals, plays an important role in the control and fine-tuning of these stress responses. Finally, we will discuss how several pathogens exploit the jasmonate perception and early signalling machinery to decoy the plants defence systems.
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Affiliation(s)
- Jonas Goossens
- Department of Plant Systems Biology, Flanders Institute for Biotechnology, Technologiepark 927, 9052, Ghent, Belgium
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Technologiepark 927, 9052, Ghent, Belgium
| | - Patricia Fernández-Calvo
- Department of Plant Systems Biology, Flanders Institute for Biotechnology, Technologiepark 927, 9052, Ghent, Belgium
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Technologiepark 927, 9052, Ghent, Belgium
| | - Fabian Schweizer
- Department of Plant Systems Biology, Flanders Institute for Biotechnology, Technologiepark 927, 9052, Ghent, Belgium
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Technologiepark 927, 9052, Ghent, Belgium
| | - Alain Goossens
- Department of Plant Systems Biology, Flanders Institute for Biotechnology, Technologiepark 927, 9052, Ghent, Belgium.
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Technologiepark 927, 9052, Ghent, Belgium.
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247
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Genome-wide Identification and Structural, Functional and Evolutionary Analysis of WRKY Components of Mulberry. Sci Rep 2016; 6:30794. [PMID: 27477686 PMCID: PMC4967854 DOI: 10.1038/srep30794] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2016] [Accepted: 07/11/2016] [Indexed: 01/04/2023] Open
Abstract
Mulberry is known to be sensitive to several biotic and abiotic stresses, which in turn have a direct impact on the yield of silk, because it is the sole food source for the silk worm. WRKYs are a family of transcription factors, which play an important role in combating various biotic and abiotic stresses. In this study, we identified 54 genes with conserved WRKY motifs in the Morus notabilis genome. Motif searches coupled with a phylogenetic analysis revealed seven sub-groups as well as the absence of members of Group Ib in mulberry. Analyses of the 2K upstream region in addition to a gene ontology terms enrichment analysis revealed putative functions of mulberry WRKYs under biotic and abiotic stresses. An RNA-seq-based analysis showed that several of the identified WRKYs have shown preferential expression in the leaf, bark, root, male flower, and winter bud of M. notabilis. Finally, expression analysis by qPCR under different stress and hormone treatments revealed genotype-specific responses. Taken together, our results briefs about the genome-wide identification of WRKYs as well as their differential response to stresses and hormones. Importantly, these data can also be utilized to identify potential molecular targets for conferring tolerance to various stresses in mulberry.
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248
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Amil-Ruiz F, Garrido-Gala J, Gadea J, Blanco-Portales R, Muñoz-Mérida A, Trelles O, de los Santos B, Arroyo FT, Aguado-Puig A, Romero F, Mercado JÁ, Pliego-Alfaro F, Muñoz-Blanco J, Caballero JL. Partial Activation of SA- and JA-Defensive Pathways in Strawberry upon Colletotrichum acutatum Interaction. FRONTIERS IN PLANT SCIENCE 2016; 7:1036. [PMID: 27471515 PMCID: PMC4945649 DOI: 10.3389/fpls.2016.01036] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/26/2016] [Accepted: 07/01/2016] [Indexed: 05/04/2023]
Abstract
Understanding the nature of pathogen host interaction may help improve strawberry (Fragaria × ananassa) cultivars. Plant resistance to pathogenic agents usually operates through a complex network of defense mechanisms mediated by a diverse array of signaling molecules. In strawberry, resistance to a variety of pathogens has been reported to be mostly polygenic and quantitatively inherited, making it difficult to associate molecular markers with disease resistance genes. Colletotrichum acutatum spp. is a major strawberry pathogen, and completely resistant cultivars have not been reported. Moreover, strawberry defense network components and mechanisms remain largely unknown and poorly understood. Assessment of the strawberry response to C. acutatum included a global transcript analysis, and acidic hormones SA and JA measurements were analyzed after challenge with the pathogen. Induction of transcripts corresponding to the SA and JA signaling pathways and key genes controlling major steps within these defense pathways was detected. Accordingly, SA and JA accumulated in strawberry after infection. Contrastingly, induction of several important SA, JA, and oxidative stress-responsive defense genes, including FaPR1-1, FaLOX2, FaJAR1, FaPDF1, and FaGST1, was not detected, which suggests that specific branches in these defense pathways (those leading to FaPR1-2, FaPR2-1, FaPR2-2, FaAOS, FaPR5, and FaPR10) were activated. Our results reveal that specific aspects in SA and JA dependent signaling pathways are activated in strawberry upon interaction with C. acutatum. Certain described defense-associated transcripts related to these two known signaling pathways do not increase in abundance following infection. This finding suggests new insight into a specific putative molecular strategy for defense against this pathogen.
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Affiliation(s)
- Francisco Amil-Ruiz
- Departamento de Bioquímica y Biología Molecular e Instituto Andaluz de Biotecnología, Edificio Severo Ochoa (C6), Universidad de CórdobaCórdoba, Spain
| | - José Garrido-Gala
- Departamento de Bioquímica y Biología Molecular e Instituto Andaluz de Biotecnología, Edificio Severo Ochoa (C6), Universidad de CórdobaCórdoba, Spain
| | - José Gadea
- Instituto de Biología Molecular y Celular de Plantas, Universidad Politécnica de Valencia–Consejo Superior de Investigaciones CientíficasValencia, Spain
| | - Rosario Blanco-Portales
- Departamento de Bioquímica y Biología Molecular e Instituto Andaluz de Biotecnología, Edificio Severo Ochoa (C6), Universidad de CórdobaCórdoba, Spain
| | - Antonio Muñoz-Mérida
- Departamento de Arquitectura de Computación, Universidad de Málaga, Campus de TeatinosMálaga, Spain
| | - Oswaldo Trelles
- Departamento de Arquitectura de Computación, Universidad de Málaga, Campus de TeatinosMálaga, Spain
| | - Berta de los Santos
- Centro Andalusian Institute of Agricultural and Fishering Research and Training (IFAPA) Las Torres-Tomejil, CAPMA–Junta de AndalucíaSevilla, Spain
| | - Francisco T. Arroyo
- Centro Andalusian Institute of Agricultural and Fishering Research and Training (IFAPA) Las Torres-Tomejil, CAPMA–Junta de AndalucíaSevilla, Spain
| | - Ana Aguado-Puig
- Centro Andalusian Institute of Agricultural and Fishering Research and Training (IFAPA) Las Torres-Tomejil, CAPMA–Junta de AndalucíaSevilla, Spain
| | - Fernando Romero
- Centro Andalusian Institute of Agricultural and Fishering Research and Training (IFAPA) Las Torres-Tomejil, CAPMA–Junta de AndalucíaSevilla, Spain
| | - José-Ángel Mercado
- Departamento de Biología Vegetal, Facultad de Ciencias, Universidad de Málaga, Campus de TeatinosMálaga, Spain
| | - Fernando Pliego-Alfaro
- Departamento de Biología Vegetal, Facultad de Ciencias, Universidad de Málaga, Campus de TeatinosMálaga, Spain
| | - Juan Muñoz-Blanco
- Departamento de Bioquímica y Biología Molecular e Instituto Andaluz de Biotecnología, Edificio Severo Ochoa (C6), Universidad de CórdobaCórdoba, Spain
| | - José L. Caballero
- Departamento de Bioquímica y Biología Molecular e Instituto Andaluz de Biotecnología, Edificio Severo Ochoa (C6), Universidad de CórdobaCórdoba, Spain
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249
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Reimer-Michalski EM, Conrath U. Innate immune memory in plants. Semin Immunol 2016; 28:319-27. [PMID: 27264335 DOI: 10.1016/j.smim.2016.05.006] [Citation(s) in RCA: 76] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 02/11/2016] [Revised: 05/12/2016] [Accepted: 05/17/2016] [Indexed: 12/26/2022]
Abstract
The plant innate immune system comprises local and systemic immune responses. Systemic plant immunity develops after foliar infection by microbial pathogens, upon root colonization by certain microbes, or in response to physical injury. The systemic plant immune response to localized foliar infection is associated with elevated levels of pattern-recognition receptors, accumulation of dormant signaling enzymes, and alterations in chromatin state. Together, these systemic responses provide a memory to the initial infection by priming the remote leaves for enhanced defense and immunity to reinfection. The plant innate immune system thus builds immunological memory by utilizing mechanisms and components that are similar to those employed in the trained innate immune response of jawed vertebrates. Therefore, there seems to be conservation, or convergence, in the evolution of innate immune memory in plants and vertebrates.
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Affiliation(s)
| | - Uwe Conrath
- Department of Plant Physiology, RWTH Aachen University, Aachen 52056, Germany.
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250
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Davila Olivas NH, Coolen S, Huang P, Severing E, van Verk MC, Hickman R, Wittenberg AHJ, de Vos M, Prins M, van Loon JJA, Aarts MGM, van Wees SCM, Pieterse CMJ, Dicke M. Effect of prior drought and pathogen stress on Arabidopsis transcriptome changes to caterpillar herbivory. THE NEW PHYTOLOGIST 2016; 210:1344-56. [PMID: 26847575 DOI: 10.1111/nph.13847] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/07/2015] [Accepted: 12/06/2015] [Indexed: 05/07/2023]
Abstract
In nature, plants are exposed to biotic and abiotic stresses that often occur simultaneously. Therefore, plant responses to combinations of stresses are most representative of how plants respond to stresses. We used RNAseq to assess temporal changes in the transcriptome of Arabidopsis thaliana to herbivory by Pieris rapae caterpillars, either alone or in combination with prior exposure to drought or infection with the necrotrophic fungus Botrytis cinerea. Pre-exposure to drought stress or Botrytis infection resulted in a significantly different timing of the caterpillar-induced transcriptional changes. Additionally, the combination of drought and P. rapae induced an extensive downregulation of A. thaliana genes involved in defence against pathogens. Despite a more substantial growth reduction observed for plants exposed to drought plus P. rapae feeding compared with P. rapae feeding alone, this did not affect weight increase of this specialist caterpillar. Plants respond to combined stresses with phenotypic and transcriptional changes that differ from the single stress situation. The effect of a previous exposure to drought or B. cinerea infection on transcriptional changes to caterpillars is largely overridden by the stress imposed by caterpillars, indicating that plants shift their response to the most recent stress applied.
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Affiliation(s)
- Nelson H Davila Olivas
- Laboratory of Entomology, Wageningen University, PO Box 16, 6700 AA, Wageningen, the Netherlands
| | - Silvia Coolen
- Plant-Microbe Interactions, Department of Biology, Utrecht University, PO Box 800.56, 3508 TB, Utrecht, the Netherlands
| | - Pingping Huang
- Laboratory of Genetics, Wageningen University, PO Box 16, 6700 AA, Wageningen, the Netherlands
| | - Edouard Severing
- Laboratory of Genetics, Wageningen University, PO Box 16, 6700 AA, Wageningen, the Netherlands
| | - Marcel C van Verk
- Plant-Microbe Interactions, Department of Biology, Utrecht University, PO Box 800.56, 3508 TB, Utrecht, the Netherlands
- Bioinformatics, Utrecht University, PO Box 800.56, 3508 TB, Utrecht, the Netherlands
| | - Richard Hickman
- Plant-Microbe Interactions, Department of Biology, Utrecht University, PO Box 800.56, 3508 TB, Utrecht, the Netherlands
| | | | - Martin de Vos
- Keygene N.V., PO Box 216, 6700 AE, Wageningen, the Netherlands
| | - Marcel Prins
- Keygene N.V., PO Box 216, 6700 AE, Wageningen, the Netherlands
| | - Joop J A van Loon
- Laboratory of Entomology, Wageningen University, PO Box 16, 6700 AA, Wageningen, the Netherlands
| | - Mark G M Aarts
- Laboratory of Genetics, Wageningen University, PO Box 16, 6700 AA, Wageningen, the Netherlands
| | - Saskia C M van Wees
- Plant-Microbe Interactions, Department of Biology, Utrecht University, PO Box 800.56, 3508 TB, Utrecht, the Netherlands
| | - Corné M J Pieterse
- Plant-Microbe Interactions, Department of Biology, Utrecht University, PO Box 800.56, 3508 TB, Utrecht, the Netherlands
| | - Marcel Dicke
- Laboratory of Entomology, Wageningen University, PO Box 16, 6700 AA, Wageningen, the Netherlands
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