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Ali I, Zhang J, Bian L. A Novel Pb 2+and Cys Induced Switch Off-On Strategy and Its Application in Detection Based on the Platform of N-Methylmesoporphyrin IX Fluorescence Being Amplied by G-Quadruplex. J Fluoresc 2025:10.1007/s10895-024-04106-9. [PMID: 39776096 DOI: 10.1007/s10895-024-04106-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/07/2024] [Accepted: 12/27/2024] [Indexed: 01/11/2025]
Abstract
Lead (Pb2+) ions give an imminent danger since they have been known to cause persistent damage to humans, plants, and animals, even at low concentrations, and cysteine (Cys) elevated levels are critical indicators for many diseases. Therefore, their detection is critical in pharmaceutical and environmental samples. This study tailored an innovative fluorescence switch off-on assay to detect Pb2+ and Cys based on the amplification of G-quadruplex (G-4) to N-methylmesoporphyrin IX (NMM). This assay operates on the fluorescence of NMM serving as a signal reporter which could be enhanced by an adenine-guanine-rich probes G-4. Initially, the fluorescence of NMM was increased after binding with G-4 and Pb2+ and effectively quenching fluorescence without altering the structure of G-4. As it was proved by Circular dichroism (CD). The number of binding sites for Pb2+ per NMM was determined to be 0.80 with a binding constant of 1.9 × 104 mol /L. The presence of Cys may disrupt the interaction between Pb2+ and G-4/NMM due to its stronger binding affinity towards Pb2+ leading to high fluorescence recovery.The assay demonstrated the capability to detect Pb2⁺ within a concentration range of 0.4 to 1.6 μM, achieving a high correlation coefficient (R2 = 0.985). with the detection limit of 0.45 μM was established. Similarly, Cys was effectively detected across a range of 1 to 6 μM, possessing correlation (R2 = 0.973) with a detection limit of 1.51 μM, further confirming that the detection limit is not influenced by the starting point of the linear range. The assay detected these compounds among various other amino acids and heavy metals. Our approach is simple and innovative, enabling the accurate determination of Pb2+ and Cys concentrations in soil and medicinal samples, highlighting its potential in practical diagnostic and environmental applications.
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Affiliation(s)
- Ihsan Ali
- College of Life Science, Northwest University, Xian, 710069, Shaanxi, China
| | - Jiaxin Zhang
- College of Life Science, Northwest University, Xian, 710069, Shaanxi, China
| | - Liujiao Bian
- College of Life Science, Northwest University, Xian, 710069, Shaanxi, China.
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2
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Wen H, Li M, Zhao CY, Xu T, Fu S, Sui H, Han C. Magnetic Titanium Dioxide Nanocomposites as a Recyclable SERRS Substrate for the Ultrasensitive Detection of Histidine. Molecules 2024; 29:2906. [PMID: 38930970 PMCID: PMC11206314 DOI: 10.3390/molecules29122906] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2024] [Revised: 06/12/2024] [Accepted: 06/14/2024] [Indexed: 06/28/2024] Open
Abstract
A highly sensitive, selective and recyclable histidine detection method based on magnetic Fe3O4@mTiO2 (M-TiO2) nanocomposites with SERRS was developed. Mesoporous M-TiO2 nanoparticles were functionalized with 4-aminothiophenol and then coupled with histidine through an azo coupling reaction in 5 min, producing the corresponding azo compound. The strong and specific SERRS response of the azo product allowed for ultrasensitive and selective detection for histidine with an M-TiO2 device loaded with Ag NPs due to the molecular resonance effect and plasmonic effect of Ag NPs under a 532 nm excitation laser. The sensitivity was further enhanced with the magnetic enrichment of M-TiO2. The limit of detection (LOD) was as low as 8.00 × 10-12 mol/L. The M-TiO2 demonstrated applicability towards histidine determination in human urine without any sample pretreatment. Additionally, the M-TiO2 device can be recycled for 3 cycles with the photodegradation of the azo product under UV irradiation due to TiO2-assisted and plasmon-enhanced photocatalysis. In summary, a multifunctional and recyclable M-TiO2 device was synthesized based on azo coupling and SERRS spectroscopy for ultra-sensitive and specific histidine sensing. In addition, the proposed system demonstrated the potential for the multiplex determination of toxic compounds in the fields of food safety, industrial production and environmental protection, which benefit from the fingerprint property and universality of SERRS.
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Affiliation(s)
| | | | | | | | | | - Huimin Sui
- School of Pharmacy, Qiqihar Medical University, Qiqihar 161000, China (C.-Y.Z.); (T.X.)
| | - Cuiyan Han
- School of Pharmacy, Qiqihar Medical University, Qiqihar 161000, China (C.-Y.Z.); (T.X.)
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3
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Li Y, Li M, Hu L, Zhang B. Fluorescence Sensors for the Detection of L-Histidine Based on Silver Nanoclusters Modulated by Copper Ions. Molecules 2024; 29:2167. [PMID: 38792029 PMCID: PMC11123781 DOI: 10.3390/molecules29102167] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2024] [Revised: 04/20/2024] [Accepted: 04/30/2024] [Indexed: 05/26/2024] Open
Abstract
In this study, Cu2+ modulated silver nanoclusters were constructed for the turn-on, label-free detection of L-histidine. Six Ag NCs protected by oligonucleotides (DNA-Ag NCs) were tested in a series of experiments. Finally, A-DAN-Ag NCs were chosen as the best candidate due to their excellent fluorescent properties. The fluorescence of A-DAN-Ag NCs was quenched using Cu2+ through energy or electron transfer. However, quenched fluorescence could be restored dramatically in the presence of L-histidine due to Cu2+ liberation from A-DAN-Ag NCs and because of the chelation between the imidazole group of L-histidine and Cu2+. The proposed sensor exhibited high selectivity towards L-histidine over other amino acids, with a limit of detection (LOD) of 0.096 μM ranging from 0 to 8 μM. The proposed sensor succeeded in detecting L-histidine in diluted human urine. Therefore, the sensor has promising practical applications in biological systems.
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Affiliation(s)
| | | | | | - Baozhu Zhang
- Department of Chemistry and Chemical Engineering, Jinzhong University, Jinzhong 030619, China; (Y.L.); (M.L.); (L.H.)
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4
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Cao Y, Song Y, Wei T, Feng T, Li M, Xue C, Xu J. MnO 2 in-situ coated upconversion nanosystem for turn-on fluorescence detection of hypoxanthine in aquatic products. Food Chem 2024; 431:137131. [PMID: 37579612 DOI: 10.1016/j.foodchem.2023.137131] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2023] [Revised: 08/01/2023] [Accepted: 08/08/2023] [Indexed: 08/16/2023]
Abstract
Hypoxanthine concentration is a potential indicator to evaluate the freshness in the early post-mortem of several aquatic products. Based on MnO2 in-situ coated upconversion nanoparticles (UCNPs) and xanthine oxidase (XOD), a novel sensor was conducted for the efficient, sensitive determination of hypoxanthine. In this strategy, upconversion fluorescence quenched by MnO2 would be restored by H2O2 and uric acid (UA), two products from the XOD-catalyzed reactions of hypoxanthine. Through pretreatment with short-time heating and alkylation by N-ethylmaleimide (NEM) to avoid potential interference from reducing substances in the food matrix, this method exhibited satisfactory selectivity. The fluorescence intensity of green emission Igreen was positively proportional to hypoxanthine concentration at a wide range of 0.5-50 mg/L with a detection limit of 0.14 mg/L. Moreover, this convenient method was employed to quantify the hypoxanthine in fish, shrimp, and shellfish samples, showing excellent potential for the application in quality control of aquatic products.
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Affiliation(s)
- Yunrui Cao
- College of Food Science and Engineering, Ocean University of China, Qingdao 266003, PR China
| | - Yu Song
- College of Food Science and Engineering, Ocean University of China, Qingdao 266003, PR China
| | - Tingting Wei
- College of Food Science and Engineering, Ocean University of China, Qingdao 266003, PR China
| | - Tingyu Feng
- College of Food Science and Engineering, Ocean University of China, Qingdao 266003, PR China
| | - Meihuan Li
- College of Food Science and Engineering, Ocean University of China, Qingdao 266003, PR China
| | - Changhu Xue
- College of Food Science and Engineering, Ocean University of China, Qingdao 266003, PR China; Qingdao Marine Science and Technology Center, Qingdao 266235, PR China.
| | - Jie Xu
- College of Food Science and Engineering, Ocean University of China, Qingdao 266003, PR China.
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5
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Thanasekaran P, Huang JH, Jhou CR, Tsao HC, Mendiratta S, Su CH, Liu CP, Liu YH, Huang JH, Lu KL. A neutral mononuclear rhenium(I) complex with a rare in situ-generated triazolyl ligand for the luminescence "turn-on" detection of histidine. Dalton Trans 2023; 52:703-709. [PMID: 36546584 DOI: 10.1039/d2dt03705j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
A rare in situ-generated mononuclear rhenium complex [Re(bpt)(CO)3(NH3)] (1, bpt = 3,5-bis(2-pyridyl)-1,2,4-triazolate) can be used as a "turn-on" luminescent probe for selectively sensing L-histidine against other amino acids. Compound 1 was prepared by reacting Re2(CO)10, 2-cyanopyridine and hydrazine with an in situ formed bpt ligand through cyclization via C-N and N-N couplings with its single-side chelating mode arrayed with respect to the Re center. Compound 1 was highly stable and showed a green light MLCT emission in DMF solution at 507 nm upon excitation at 360 nm. Interestingly, the emission from 1 could be quenched by the addition of metal ions such as Ni2+ and Cu2+ but the emission efficiently recovered with the introduction of histidine. However, histidine could only be selectively detected when a combination of compound 1 and Ni2+ was used. Therefore, the luminescence response of the Ni2+-modified compound 1 could be utilized as a "turn-on" probe for the selective detection of histidine. This work provides a simple method for developing new sensing platforms of a discrete metal complex based on rare in situ generation.
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Affiliation(s)
- Pounraj Thanasekaran
- Department of Chemistry, Fu Jen Catholic University, New Taipei City 24205, Taiwan. .,Department of Chemistry, Pondicherry University, Puducherry 605 014, India
| | - Jui-Hsiang Huang
- Department of Chemistry, National Changhua University of Education, Changhua 500, Taiwan. .,Institute of Chemistry, Academia Sinica, Taipei 115, Taiwan
| | - Cing-Rou Jhou
- Department of Chemistry, Fu Jen Catholic University, New Taipei City 24205, Taiwan.
| | - Hsiang-Chun Tsao
- Department of Chemistry, Fu Jen Catholic University, New Taipei City 24205, Taiwan.
| | | | - Cing-Huei Su
- Department of Chemistry, Fu Jen Catholic University, New Taipei City 24205, Taiwan.
| | - Ching-Ping Liu
- Department of Chemistry, Fu Jen Catholic University, New Taipei City 24205, Taiwan.
| | - Yen-Hsiang Liu
- Department of Chemistry, Fu Jen Catholic University, New Taipei City 24205, Taiwan.
| | - Jui-Hsien Huang
- Department of Chemistry, National Changhua University of Education, Changhua 500, Taiwan.
| | - Kuang-Lieh Lu
- Department of Chemistry, Fu Jen Catholic University, New Taipei City 24205, Taiwan. .,Institute of Chemistry, Academia Sinica, Taipei 115, Taiwan
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6
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Tang S, Wu X, Zhao P, Tang K, Chen Y, Fu J, Zhou S, Yang Z, Zhang Z. A near-infrared fluorescence capillary imprinted sensor for chiral recognition and sensitive detection of l-histidine. Anal Chim Acta 2022; 1206:339794. [DOI: 10.1016/j.aca.2022.339794] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/22/2022] [Revised: 03/17/2022] [Accepted: 03/30/2022] [Indexed: 12/30/2022]
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7
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Zhang Z, Zhao W, Hu C, Cao Y, Liu Y, Liu Q. A Convenient and Label-Free Colorimetric Detection for L-Histidine Based on Inhibition of Oxidation of 3,3',5,5'-Tetramethylbenzidine-H 2O 2 System Triggered by Copper Ions. Front Chem 2021; 9:773519. [PMID: 34888294 PMCID: PMC8649665 DOI: 10.3389/fchem.2021.773519] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2021] [Accepted: 10/05/2021] [Indexed: 01/07/2023] Open
Abstract
L-Histidine (L-His) is an essential amino acid, which is used to synthesize proteins and enzymes. The concentration of L-His in the body is controlled to regulate tissue growth and repair of tissues. In this study, a rapid and sensitive method was developed for colorimetric L-his detection using Cu2+ ions to inhibit the oxidation of 3,3',5,5'-tetramethylbenzidine (TMB)-H2O2 system. H2O2 can oxidize TMB to oxTMB in the presence of copper, and the change in color from colorless (TMB) to blue (oxTMB) is similar to that observed in the presence of peroxidase. However, because the imidazole ring and carboxyl group of L-His can coordinate with Cu2+ ions to form stable L-His-Cu2+ complexes, the color of the TMB-H2O2 solution remains unchanged after the addition of L-His. Therefore, because L-His effectively hinders the colorimetric reaction of TMB with H2O2, this assay can be used to quantitatively determine the concentration of L-His in samples. Under optimized conditions, our colorimetric sensor exhibited two linear ranges of 60 nM to 1 μM and 1 μM to 1 mM for L-His detection and a detection limit of 50 nM (S/N = 3); furthermore, the assay can be performed within 20 min. Moreover, the proposed assay was used to determine the concentration of L-His in urine samples, suggesting that this convenient and label-free colorimetric method presents promising applications in bioanalytical chemistry and clinical diagnosis.
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Affiliation(s)
- Zhikun Zhang
- School of Chemical and Pharmaceutical Engineering, Hebei University of Science and Technology, Shijiazhuang, China
| | - Wenmeng Zhao
- School of Chemical and Pharmaceutical Engineering, Hebei University of Science and Technology, Shijiazhuang, China
| | - Cuixia Hu
- School of Chemical and Pharmaceutical Engineering, Hebei University of Science and Technology, Shijiazhuang, China
| | - Yapeng Cao
- School of Chemical and Pharmaceutical Engineering, Hebei University of Science and Technology, Shijiazhuang, China
| | - Yumin Liu
- School of Chemical and Pharmaceutical Engineering, Hebei University of Science and Technology, Shijiazhuang, China
| | - Qingju Liu
- Beijing Research Center for Agriculture Standards and Testing, Beijing Academy of Agriculture and Forestry Sciences, Beijing, China
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8
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Ho JSY, Di Tullio F, Schwarz M, Low D, Incarnato D, Gay F, Tabaglio T, Zhang J, Wollmann H, Chen L, An O, Chan THM, Hall Hickman A, Zheng S, Roudko V, Chen S, Karz A, Ahmed M, He HH, Greenbaum BD, Oliviero S, Serresi M, Gargiulo G, Mann KM, Hernando E, Mulholland D, Marazzi I, Wee DKB, Guccione E. HNRNPM controls circRNA biogenesis and splicing fidelity to sustain cancer cell fitness. eLife 2021; 10:e59654. [PMID: 34075878 PMCID: PMC8346284 DOI: 10.7554/elife.59654] [Citation(s) in RCA: 35] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/04/2020] [Accepted: 05/30/2021] [Indexed: 12/25/2022] Open
Abstract
High spliceosome activity is a dependency for cancer cells, making them more vulnerable to perturbation of the splicing machinery compared to normal cells. To identify splicing factors important for prostate cancer (PCa) fitness, we performed pooled shRNA screens in vitro and in vivo. Our screens identified heterogeneous nuclear ribonucleoprotein M (HNRNPM) as a regulator of PCa cell growth. RNA- and eCLIP-sequencing identified HNRNPM binding to transcripts of key homeostatic genes. HNRNPM binding to its targets prevents aberrant exon inclusion and backsplicing events. In both linear and circular mis-spliced transcripts, HNRNPM preferentially binds to GU-rich elements in long flanking proximal introns. Mimicry of HNRNPM-dependent linear-splicing events using splice-switching-antisense-oligonucleotides was sufficient to inhibit PCa cell growth. This suggests that PCa dependence on HNRNPM is likely a result of mis-splicing of key homeostatic coding and non-coding genes. Our results have further been confirmed in other solid tumors. Taken together, our data reveal a role for HNRNPM in supporting cancer cell fitness. Inhibition of HNRNPM activity is therefore a potential therapeutic strategy in suppressing growth of PCa and other solid tumors.
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Affiliation(s)
- Jessica SY Ho
- Institute of Molecular and Cell Biology (IMCB), Agency for Science, Technology and Research (A*STAR)SingaporeSingapore
- Department of Microbiology, Icahn School of Medicine at Mount SinaiNew YorkUnited States
| | - Federico Di Tullio
- Center for Therapeutics Discovery, department of Oncological Sciences and Pharmacological Sciences, Tisch Cancer Institute, Icahn School of Medicine at Mount SinaiNew YorkUnited States
- Tisch Cancer Institute, Icahn School of Medicine at Mount SinaiNew YorkUnited States
- Department of Oncological Sciences, Icahn School of Medicine at Mount SinaiNew YorkUnited States
| | - Megan Schwarz
- Center for Therapeutics Discovery, department of Oncological Sciences and Pharmacological Sciences, Tisch Cancer Institute, Icahn School of Medicine at Mount SinaiNew YorkUnited States
- Tisch Cancer Institute, Icahn School of Medicine at Mount SinaiNew YorkUnited States
- Department of Oncological Sciences, Icahn School of Medicine at Mount SinaiNew YorkUnited States
| | - Diana Low
- Institute of Molecular and Cell Biology (IMCB), Agency for Science, Technology and Research (A*STAR)SingaporeSingapore
| | - Danny Incarnato
- IIGM (Italian Institute for Genomic Medicine)TorinoItaly
- Dipartimento di Scienze della Vita e Biologia dei Sistemi Università di TorinoTorinoItaly
- Department of Molecular Genetics, Groningen Biomolecular Sciences and Biotechnology Institute (GBB), University of GroningenGroningenNetherlands
| | - Florence Gay
- Institute of Molecular and Cell Biology (IMCB), Agency for Science, Technology and Research (A*STAR)SingaporeSingapore
| | - Tommaso Tabaglio
- Institute of Molecular and Cell Biology (IMCB), Agency for Science, Technology and Research (A*STAR)SingaporeSingapore
| | - JingXian Zhang
- Institute of Molecular and Cell Biology (IMCB), Agency for Science, Technology and Research (A*STAR)SingaporeSingapore
| | - Heike Wollmann
- Institute of Molecular and Cell Biology (IMCB), Agency for Science, Technology and Research (A*STAR)SingaporeSingapore
| | - Leilei Chen
- Cancer Science Institute of Singapore, National University of SingaporeSingaporeSingapore
- Department of Anatomy, Yong Loo Lin School of Medicine, National University of SingaporeSingaporeSingapore
| | - Omer An
- Cancer Science Institute of Singapore, National University of SingaporeSingaporeSingapore
| | - Tim Hon Man Chan
- Cancer Science Institute of Singapore, National University of SingaporeSingaporeSingapore
| | - Alexander Hall Hickman
- Institute of Molecular and Cell Biology (IMCB), Agency for Science, Technology and Research (A*STAR)SingaporeSingapore
| | - Simin Zheng
- Department of Microbiology, Icahn School of Medicine at Mount SinaiNew YorkUnited States
- NTU Institute of Structural Biology, Nanyang Technological UniversitySingaporeSingapore
| | - Vladimir Roudko
- Tisch Cancer Institute, Icahn School of Medicine at Mount SinaiNew YorkUnited States
- Department of Oncological Sciences, Icahn School of Medicine at Mount SinaiNew YorkUnited States
| | - Sujun Chen
- Department of Medical Biophysics, University of TorontoTorontoCanada
- Princess Margaret Cancer Center, University Health NetworkTorontoCanada
- Ontario Institute for Cancer ResearchTorontoCanada
| | - Alcida Karz
- Interdisciplinary Melanoma Cooperative Group, New York University Langone Medical CenterNew YorkUnited States
- Department of Pathology, New York University Langone Medical CenterNew YorkUnited States
| | - Musaddeque Ahmed
- Princess Margaret Cancer Center, University Health NetworkTorontoCanada
| | - Housheng Hansen He
- Department of Medical Biophysics, University of TorontoTorontoCanada
- Princess Margaret Cancer Center, University Health NetworkTorontoCanada
| | - Benjamin D Greenbaum
- Tisch Cancer Institute, Icahn School of Medicine at Mount SinaiNew YorkUnited States
- Department of Oncological Sciences, Icahn School of Medicine at Mount SinaiNew YorkUnited States
- Department of Medicine, Hematology and Medical Oncology, Icahn School of Medicine at Mount SinaiNew YorkUnited States
- Department of Pathology, Icahn School of Medicine at Mount SinaiNew YorkUnited States
| | - Salvatore Oliviero
- IIGM (Italian Institute for Genomic Medicine)TorinoItaly
- Dipartimento di Scienze della Vita e Biologia dei Sistemi Università di TorinoTorinoItaly
| | - Michela Serresi
- Max Delbruck Center for Molecular MedicineBerlin-BuchGermany
| | | | - Karen M Mann
- Department of Molecular Oncology, Moffitt Cancer CenterTampaUnited States
| | - Eva Hernando
- Interdisciplinary Melanoma Cooperative Group, New York University Langone Medical CenterNew YorkUnited States
- Department of Pathology, New York University Langone Medical CenterNew YorkUnited States
| | - David Mulholland
- Tisch Cancer Institute, Icahn School of Medicine at Mount SinaiNew YorkUnited States
- Department of Oncological Sciences, Icahn School of Medicine at Mount SinaiNew YorkUnited States
| | - Ivan Marazzi
- Department of Microbiology, Icahn School of Medicine at Mount SinaiNew YorkUnited States
| | - Dave Keng Boon Wee
- Institute of Molecular and Cell Biology (IMCB), Agency for Science, Technology and Research (A*STAR)SingaporeSingapore
| | - Ernesto Guccione
- Institute of Molecular and Cell Biology (IMCB), Agency for Science, Technology and Research (A*STAR)SingaporeSingapore
- Center for Therapeutics Discovery, department of Oncological Sciences and Pharmacological Sciences, Tisch Cancer Institute, Icahn School of Medicine at Mount SinaiNew YorkUnited States
- Tisch Cancer Institute, Icahn School of Medicine at Mount SinaiNew YorkUnited States
- Department of Oncological Sciences, Icahn School of Medicine at Mount SinaiNew YorkUnited States
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9
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Fluorescent probes for the stabilization and detection of G-quadruplexes and their prospective applications. J INDIAN CHEM SOC 2021. [DOI: 10.1016/j.jics.2021.100078] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
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10
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Highly sensitive and selective colorimetric sensing of histidine by NAC functionalized AuNPs in aqueous medium with real sample application. Microchem J 2021. [DOI: 10.1016/j.microc.2020.105661] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
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11
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Ma L, Han X, Xia L, Qu F, Kong RM. A label-free G-quadruplex-based fluorescence assay for sensitive detection of alkaline phosphatase with the assistance of Cu 2. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2020; 227:117607. [PMID: 31654846 DOI: 10.1016/j.saa.2019.117607] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/15/2019] [Revised: 08/07/2019] [Accepted: 10/06/2019] [Indexed: 06/10/2023]
Abstract
The level of alkaline phosphate (ALP) is a significant biomarker index in organism. In this work, a label-free and sensitive G-quadruplex fluorescence assay for monitoring ALP activity has been developed with the assistance of Cu2+ based on the competitive binding effect between pyrophosphate (PPi) and G-quadruplex-N-methylmesoporphyrin (G4/NMM) complex to Cu2+. In the sensing assay, the G4/NMM complex is employed as a signal indicator, while the Cu2+ as a quencher and the PPi as recovery agent as well as the hydrolytic substance for ALP. In details, the fluorescence of the G4/NMM complex was efficiently quenched by introducing Cu2+ due to the proximal carboxylate groups of NMM coordinating with the Cu2+ as well as the unfolding of G-quadruplex by Cu2+, while the higher affinity between PPi and Cu2+ could lead to the fluorescence recovery. However, in the presence of ALP, the PPi was hydrolyzed to phosphate ions (Pi) which cannot integrate with Cu2+, resulting in the fluorescence quenching once again. Thus, a simple and facile way to inspect ALP has been exploited. The proposed assay shows a good linear relationship in the range from 0.5 to 100 U/L with the detection limit of 0.3 U/L. Moreover, the fabricated method is succeeded in detecting ALP in human serum samples, indicating the potential as a profitable candidate in biological and biomedical application.
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Affiliation(s)
- Lin Ma
- College of Chemistry and Chemical Engineering, Qufu Normal University, Qufu Shandong, 273165, PR China
| | - Xue Han
- College of Chemistry and Chemical Engineering, Qufu Normal University, Qufu Shandong, 273165, PR China
| | - Lian Xia
- College of Chemistry and Chemical Engineering, Qufu Normal University, Qufu Shandong, 273165, PR China
| | - Fengli Qu
- College of Chemistry and Chemical Engineering, Qufu Normal University, Qufu Shandong, 273165, PR China
| | - Rong-Mei Kong
- College of Chemistry and Chemical Engineering, Qufu Normal University, Qufu Shandong, 273165, PR China.
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12
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Shen R, Zou L, Wu S, Li T, Wang J, Liu J, Ling L. A novel label-free fluorescent detection of histidine based upon Cu 2+-specific DNAzyme and hybridization chain reaction. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2019; 213:42-47. [PMID: 30682646 DOI: 10.1016/j.saa.2019.01.062] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/16/2018] [Revised: 01/16/2019] [Accepted: 01/16/2019] [Indexed: 06/09/2023]
Abstract
A novel label-free fluorescent sensor for histidine was developed based upon Cu2+-specific DNAzyme, hybridization chain reaction(HCR) and triplex DNA. Cu2+ can bind to the histidine, in the presence of histidine, leading to the inhibition of the cleavage of substrate strand of Cu2+-dependent DNAzyme, then the intact substrate strand trigger the HCR between H1 and H2. The HCR product can be recognized by triplex-forming oligonucleotide (TFO) through triplex formation and reported by the fluorescence of berberine, the fluorescence intensity of the sensing system was proportional to the concentration of histidine during the range of 5.7-455 nmol L-1, with a detection limit of 2.0 nmol L-1.
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Affiliation(s)
- Ruidi Shen
- School of Chemistry, Sun Yat-Sen University, Guangzhou 510275, PR China
| | - Li Zou
- School of Chemistry, Sun Yat-Sen University, Guangzhou 510275, PR China
| | - Shixin Wu
- Maternal and Child Care Service Centre of Yunxi County, Shiyan 442600, PR China
| | - Tingting Li
- School of Chemistry, Sun Yat-Sen University, Guangzhou 510275, PR China
| | - Jing Wang
- School of Chemistry, Sun Yat-Sen University, Guangzhou 510275, PR China
| | - Jianmin Liu
- Department of Neurosurgery, the First Affiliated Hospital of Guangzhou University of Traditional Chinese Medicine, Guangzhou 510405, PR China
| | - Liansheng Ling
- School of Chemistry, Sun Yat-Sen University, Guangzhou 510275, PR China.
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13
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Xu J, Shen X, Jia L, Ge Z, Zhou D, Yang Y, Ma T, Luo Y, Zhu T. GdPO 4-Based Nanoprobe for Bioimaging and Selective Recognition of Dipicolinic Acid and Cysteine by a Sensing Ensemble Approach. ACS Biomater Sci Eng 2019; 5:996-1004. [PMID: 33405790 DOI: 10.1021/acsbiomaterials.8b01126] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Multiple functions incorporated in one single-component nanoplatform pave the way for important biomedicine applications. Herein, a multifunctional terbium-doped gadolinium orthophosphate (GdPO4:Tb-EDTA) nanoplatform was prepared through a simple, ecofriendly, one-step hydrothermal method. Results showed that dipicolinic acid (DPA), the biomarker of bacterial spores, significantly increased the fluorescence intensity of this nanoplatform and conferred it with rapid response and excellent selectivity. Subsequently, the fluorescence of the ensemble GdPO4:Tb-EDTA-DPA can be remarkably quenched by Cu2+, which led to a rewritable nanosensor used in the detection of cysteine (Cys) with excellent sensitivity. In addition, GdPO4:Tb-EDTA can also be a potential T1-weighted magnetic resonance imaging (MRI) contrast agent, which indicated a satisfactory in vitro MRI with r1 relaxivity values of 13.9 mM-1 s-1 and in vivo MRI through intravenous administration on a rat model. Overall, the proposed assay may have great theoretical and practical significance for designing multifunctional biomaterials.
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Affiliation(s)
- Jun Xu
- College of Chemistry and Chemical Engineering, Henan Polytechnic University, No. 2001, Shiji Road, Jiaozuo 454000, P. R. China
| | - Xiaoke Shen
- College of Chemistry and Chemical Engineering, Henan Polytechnic University, No. 2001, Shiji Road, Jiaozuo 454000, P. R. China
| | - Lei Jia
- College of Chemistry and Chemical Engineering, Henan Polytechnic University, No. 2001, Shiji Road, Jiaozuo 454000, P. R. China
| | - Zhijun Ge
- The Affiliated Yixing Hospital of Jiangsu University, No. 75, Tongzhenguan Road, Yixing 214200, P. R. China
| | - Dong Zhou
- Department of Neurosurgery, Guangdong General Hospital, Guangdong Academy of Medical Sciences, No. 106, Zhongshan Road, Guangzhou 510080, P. R. China
| | - Yong Yang
- Department of Neurosurgery, Guangdong General Hospital, Guangdong Academy of Medical Sciences, No. 106, Zhongshan Road, Guangzhou 510080, P. R. China
| | - Tieliang Ma
- The Affiliated Yixing Hospital of Jiangsu University, No. 75, Tongzhenguan Road, Yixing 214200, P. R. China
| | - Yifeng Luo
- The Affiliated Yixing Hospital of Jiangsu University, No. 75, Tongzhenguan Road, Yixing 214200, P. R. China
| | - Taofeng Zhu
- The Affiliated Yixing Hospital of Jiangsu University, No. 75, Tongzhenguan Road, Yixing 214200, P. R. China
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14
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Xu J, Shen XK, Jia L, Cao JL, Wang Y, Zhao XL, Bi N, Guo SL, Ma TY. A lanthanide-based magnetic nanosensor as an erasable and visible platform for multi-color point-of-care detection of multiple targets and the potential application by smartphone. J Mater Chem B 2019; 7:734-743. [DOI: 10.1039/c8tb02791a] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A magnetic Fe3O4@CePO4:Tb-EDTA-Eu nanosensor as an erasable and visible platform for the multi-color detection of multiple targets was designed.
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Affiliation(s)
- Jun Xu
- College of Chemistry and Chemical Engineering
- Henan Polytechnic University
- Jiaozuo
- China
| | - Xiao-Ke Shen
- College of Chemistry and Chemical Engineering
- Henan Polytechnic University
- Jiaozuo
- China
| | - Lei Jia
- College of Chemistry and Chemical Engineering
- Henan Polytechnic University
- Jiaozuo
- China
| | - Jian-Liang Cao
- College of Chemistry and Chemical Engineering
- Henan Polytechnic University
- Jiaozuo
- China
| | - Yan Wang
- School of Safety Science and Engineering
- State Key Laboratory Cultivation Base for Gas Geology and Gas Control
- Henan Polytechnic University
- Jiaozuo 454000
- China
| | - Xiao-Lei Zhao
- College of Chemistry and Chemical Engineering
- Henan Polytechnic University
- Jiaozuo
- China
| | - Ning Bi
- College of Chemistry and Chemical Engineering
- Henan Polytechnic University
- Jiaozuo
- China
| | - Sheng-Li Guo
- College of Chemistry and Chemical Engineering
- Henan Polytechnic University
- Jiaozuo
- China
| | - Tian-Yi Ma
- Discipline of Chemistry
- University of Newcastle
- Newcastle
- Australia
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15
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A new ICT based Schiff-base chemosensor for colorimetric selective detection of copper and its copper complex for both colorimetric and fluorometric detection of Cysteine. J Photochem Photobiol A Chem 2018. [DOI: 10.1016/j.jphotochem.2018.08.018] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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16
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Gu P, Zhang G, Deng Z, Tang Z, Zhang H, Khusbu FY, Wu K, Chen M, Ma C. A novel label-free colorimetric detection of l-histidine using Cu 2+-modulated G-quadruplex-based DNAzymes. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2018; 203:195-200. [PMID: 29864643 DOI: 10.1016/j.saa.2018.05.084] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/18/2017] [Revised: 05/24/2018] [Accepted: 05/27/2018] [Indexed: 06/08/2023]
Abstract
We proposed a colorimetric method for l-histidine detection based on Cu2+-mediated DNAzyme and G-quadruplex-hemin complex catalyzed oxidation of 2,2'-azino-bis(3-ethylbenzothiazoline-6-sulfonic acid) diammonium salt (ABTS). In this system, after the addition of l-histidine, the formation of G-quadruplex-hemin complex will be disturbed, thus the colorimetric signal intensity conversely corresponds to the concentration of histidine. In this assay, a lower detection limit of l-histidine (50 nM) is addressed comparing to previously reported colorimetric methods. The cost is extremely low as the proposed design is both label-free and enzyme-free. All the more vitally, the colorimetric detection procedure is substantially straightforward with no further modification processes. By and large, the sensor can provide a promising plan for the detection of l-histidine.
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Affiliation(s)
- Pan Gu
- School of Life Sciences, Central South University, Changsha 410013, China
| | - Gehou Zhang
- School of Life Sciences, Central South University, Changsha 410013, China
| | - Zhiyi Deng
- School of Life Sciences, Central South University, Changsha 410013, China
| | - Zhenwei Tang
- School of Life Sciences, Central South University, Changsha 410013, China
| | - Huifang Zhang
- School of Life Sciences, Central South University, Changsha 410013, China
| | | | - Kefeng Wu
- School of Life Sciences, Central South University, Changsha 410013, China
| | - Mingjian Chen
- School of Life Sciences, Central South University, Changsha 410013, China
| | - Changbei Ma
- School of Life Sciences, Central South University, Changsha 410013, China.
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17
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Wang H, Zheng J, Sun Y, Li T. Cellular environment-responsive intelligent DNA logic circuits for controllable molecular sensing. Biosens Bioelectron 2018; 117:729-735. [DOI: 10.1016/j.bios.2018.07.006] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/07/2018] [Revised: 06/12/2018] [Accepted: 07/05/2018] [Indexed: 12/31/2022]
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18
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Zhang ST, Li P, Liao C, Luo T, Kou X, Xiao D. A highly sensitive luminescent probe based on Ru(II)-bipyridine complex for Cu 2+, l-Histidine detection and cellular imaging. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2018; 201:161-169. [PMID: 29751349 DOI: 10.1016/j.saa.2018.05.001] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/16/2017] [Revised: 04/29/2018] [Accepted: 05/01/2018] [Indexed: 06/08/2023]
Abstract
A ruthenium(II) bipyridyl complex conjugated with functionalized Schiff base (RuA) has been synthesized and functioned as a luminescent probe. The luminescence of RuA was greatly quenched by Cu2+ due to its molecular coordination with paramagnetic Cu2+. Subsequently, the addition of l-Histidine can turn on the luminescence of the RuA-Cu(II) ensemble, which can be attributed to the replacement of RuA in RuA-Cu(II) ensemble by l-Histidine. On the basis of the quenching and recovery of the luminescence of RuA, we proposed a rapid and highly sensitive on-off-on luminescent assay for sensing Cu2+ and l-Histidine in aqueous solution. Under the optimal conditions, Cu2+ and l-Histidine can be detected in the concentration range of 5 nM-9.0 μM and 50 nM-30 μM, respectively, and the corresponding detection limits were calculated to be 0.35 and 0.44 nM (S/N=3), separately. The proposed luminescent probe has been successfully utilized for the analysis of Cu2+ and l-Histidine in real samples (drinking water and biological fluids). Furthermore, the probe revealed good photostability, low cytotoxicity and excellent permeability, making it a suitable candidate for cell imaging and labeling in vitro.
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Affiliation(s)
- Shi-Ting Zhang
- College of Chemistry, Sichuan University, Chengdu 610064, China
| | - Panpan Li
- Department of Architecture and Environment, Sichuan University, Chengdu 610065, China
| | - Caiyun Liao
- College of Chemistry, Sichuan University, Chengdu 610064, China
| | - Tingting Luo
- College of Chemistry, Sichuan University, Chengdu 610064, China
| | - Xingming Kou
- College of Chemistry, Sichuan University, Chengdu 610064, China.
| | - Dan Xiao
- College of Chemistry, Sichuan University, Chengdu 610064, China; College of Chemical Engineering, Sichuan University, Chengdu 610065, China.
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19
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Gu Z, Cao Z. Molecular switch-modulated fluorescent copper nanoclusters for selective and sensitive detection of histidine and cysteine. Anal Bioanal Chem 2018; 410:4991-4999. [DOI: 10.1007/s00216-018-1149-9] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/13/2018] [Revised: 04/26/2018] [Accepted: 05/16/2018] [Indexed: 12/11/2022]
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20
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Li Z, Zhao J, Wang Z, Dai Z. Nickel-mediated allosteric manipulation of G-quadruplex DNAzyme for highly selective detection of histidine. Anal Chim Acta 2018; 1008:90-95. [DOI: 10.1016/j.aca.2017.12.040] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/17/2017] [Revised: 11/30/2017] [Accepted: 12/11/2017] [Indexed: 11/29/2022]
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21
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Lin X, Liu Y, Deng J, Lyu Y, Qian P, Li Y, Wang S. Multiple advanced logic gates made of DNA-Ag nanocluster and the application for intelligent detection of pathogenic bacterial genes. Chem Sci 2018; 9:1774-1781. [PMID: 29675221 PMCID: PMC5892130 DOI: 10.1039/c7sc05246d] [Citation(s) in RCA: 56] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2017] [Accepted: 01/05/2018] [Indexed: 12/19/2022] Open
Abstract
The integration of multiple DNA logic gates on a universal platform to implement advance logic functions is a critical challenge for DNA computing. Herein, a straightforward and powerful strategy in which a guanine-rich DNA sequence lighting up a silver nanocluster and fluorophore was developed to construct a library of logic gates on a simple DNA-templated silver nanoclusters (DNA-AgNCs) platform. This library included basic logic gates, YES, AND, OR, INHIBIT, and XOR, which were further integrated into complex logic circuits to implement diverse advanced arithmetic/non-arithmetic functions including half-adder, half-subtractor, multiplexer, and demultiplexer. Under UV irradiation, all the logic functions could be instantly visualized, confirming an excellent repeatability. The logic operations were entirely based on DNA hybridization in an enzyme-free and label-free condition, avoiding waste accumulation and reducing cost consumption. Interestingly, a DNA-AgNCs-based multiplexer was, for the first time, used as an intelligent biosensor to identify pathogenic genes, E. coli and S. aureus genes, with a high sensitivity. The investigation provides a prototype for the wireless integration of multiple devices on even the simplest single-strand DNA platform to perform diverse complex functions in a straightforward and cost-effective way.
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Affiliation(s)
- Xiaodong Lin
- Key Laboratory of Food Nutrition and Safety (Ministry of Education) , College of Food Engineering and Biotechnology , Tianjin University of Science and Technology , Tianjin 300457 , China .
| | - Yaqing Liu
- Key Laboratory of Food Nutrition and Safety (Ministry of Education) , College of Food Engineering and Biotechnology , Tianjin University of Science and Technology , Tianjin 300457 , China .
| | - Jiankang Deng
- Key Laboratory of Food Nutrition and Safety (Ministry of Education) , College of Food Engineering and Biotechnology , Tianjin University of Science and Technology , Tianjin 300457 , China .
| | - Yanlong Lyu
- Key Laboratory of Food Nutrition and Safety (Ministry of Education) , College of Food Engineering and Biotechnology , Tianjin University of Science and Technology , Tianjin 300457 , China .
| | - Pengcheng Qian
- Key Laboratory of Food Nutrition and Safety (Ministry of Education) , College of Food Engineering and Biotechnology , Tianjin University of Science and Technology , Tianjin 300457 , China .
| | - Yunfei Li
- Key Laboratory of Food Nutrition and Safety (Ministry of Education) , College of Food Engineering and Biotechnology , Tianjin University of Science and Technology , Tianjin 300457 , China .
| | - Shuo Wang
- Tianjin Key Laboratory of Food Science and Health , School of Medicine , Nankai University , Tianjin 300071 , China .
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22
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Ji D, Meng H, Ge J, Zhang L, Wang H, Bai D, Li J, Qu L, Li Z. Ultrasensitive fluorometric glutathione assay based on a conformational switch of a G-quadruplex mediated by silver(I). Mikrochim Acta 2017. [DOI: 10.1007/s00604-017-2343-8] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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23
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Liu Y, Ding D, Zhen Y, Guo R. Amino acid-mediated ‘turn-off/turn-on’ nanozyme activity of gold nanoclusters for sensitive and selective detection of copper ions and histidine. Biosens Bioelectron 2017; 92:140-146. [DOI: 10.1016/j.bios.2017.01.036] [Citation(s) in RCA: 117] [Impact Index Per Article: 14.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/02/2016] [Revised: 01/15/2017] [Accepted: 01/17/2017] [Indexed: 11/24/2022]
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24
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Xu S, Liu Y, Yang H, Zhao K, Li J, Deng A. Fluorescent nitrogen and sulfur co-doped carbon dots from casein and their applications for sensitive detection of Hg 2+ and biothiols and cellular imaging. Anal Chim Acta 2017; 964:150-160. [PMID: 28351631 DOI: 10.1016/j.aca.2017.01.037] [Citation(s) in RCA: 87] [Impact Index Per Article: 10.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/11/2016] [Revised: 01/13/2017] [Accepted: 01/21/2017] [Indexed: 11/25/2022]
Abstract
Fluorescent nitrogen and sulfur co-doped carbon dots (NSCDs) were synthesized by a one-step pyrolysis strategy using casein as carbon, nitrogen and sulfur sources, and characterized by UV-vis spectrum, fluorescent spectrum, X-ray photoelectron spectroscopy (XPS) and FT-IR, etc. The synthesized NSCDs displayed a blue emission under ultraviolet illumination with a quantum yield of 31.8%, and a good aqueous solubility, photostability and biocompatibility. It was found that the fluorescence intensity of NSCDs could be selectively quenched by Hg2+, so NSCDs was used as an effective probe for the detection of Hg2+. The linear range and the limit of detection (LOD) of the fluorescent sensor based on NSCDs for the detection of Hg2+ were 0.01-0.25 μM and 6.5 nM, respectively. Spiked water samples were detected by the sensor with the recovery of 95.4-106.3% and relative standard deviation (RSD) of 3.6-8.6%. It was also observed that the quenched NSCDs-Hg2+ system could be restored by the addition of biothiols such as l-cysteine (Lcy), homocysteine (Hcy) and glutathione (GSH), thus NSCDs-Hg2+ system was employed as a fluorescent sensor for the detection of biothiols. The linear range and LOD of the NSCDs-Hg2+ system were 1-10 μM and 23.6 nM for Lcy, 0.2-2.5 μM and 12.3 nM for Hcy, and 0.1-2.0 μM and 16.8 nM for GSH, respectively. The NSCDs-Hg2+ system was applied for the detection of biothiols in serum samples with satisfied results. In addition, the study in vitro imaging HeLa cells revealed that the synthesized NSCDs could be used as effective fluorescent probes in cellular imaging without noticeable cytotoxicity.
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Affiliation(s)
- Shouming Xu
- The Key Lab of Health Chemistry & Molecular Diagnosis of Suzhou, College of Chemistry, Chemical Engineering and Materials Science, Soochow University, Suzhou 215123, China
| | - Yang Liu
- The Key Lab of Health Chemistry & Molecular Diagnosis of Suzhou, College of Chemistry, Chemical Engineering and Materials Science, Soochow University, Suzhou 215123, China; School of Public Health, Nantong University, 9 Seyuan Rd., Nantong 226019, China
| | - Hong Yang
- College of Pharmacy Sciences, Soochow University, Suzhou 215123, China
| | - Kang Zhao
- The Key Lab of Health Chemistry & Molecular Diagnosis of Suzhou, College of Chemistry, Chemical Engineering and Materials Science, Soochow University, Suzhou 215123, China
| | - Jianguo Li
- The Key Lab of Health Chemistry & Molecular Diagnosis of Suzhou, College of Chemistry, Chemical Engineering and Materials Science, Soochow University, Suzhou 215123, China.
| | - Anping Deng
- The Key Lab of Health Chemistry & Molecular Diagnosis of Suzhou, College of Chemistry, Chemical Engineering and Materials Science, Soochow University, Suzhou 215123, China.
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25
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Liu Z, Luo X, Li Z, Huang Y, Nie Z, Wang HH, Yao S. Enzyme-Activated G-Quadruplex Synthesis for in Situ Label-Free Detection and Bioimaging of Cell Apoptosis. Anal Chem 2017; 89:1892-1899. [DOI: 10.1021/acs.analchem.6b04360] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Affiliation(s)
- Zhuoliang Liu
- College
of Science, National University of Defence Technology, Changsha, 410073, People’s Republic of China
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26
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Zhang Z, Wang L, Li G, Ye B. Lanthanide coordination polymer nanoparticles as a turn-on fluorescence sensing platform for simultaneous detection of histidine and cysteine. Analyst 2017; 142:1821-1826. [DOI: 10.1039/c7an00415j] [Citation(s) in RCA: 40] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A turn-on fluorescent sensor for simultaneous detection of histidine and cysteine based on lanthanide coordination polymer nanoparticles.
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Affiliation(s)
- Zhenzhen Zhang
- College of Chemistry and Molecular Engineering
- Zhengzhou University
- Zhengzhou
- PR China
| | - Lu Wang
- College of Chemistry and Molecular Engineering
- Zhengzhou University
- Zhengzhou
- PR China
- Department of Environmental Engineering and Chemistry
| | - Gaiping Li
- College of Chemistry and Molecular Engineering
- Zhengzhou University
- Zhengzhou
- PR China
| | - Baoxian Ye
- College of Chemistry and Molecular Engineering
- Zhengzhou University
- Zhengzhou
- PR China
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27
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Xu L, Hong S, Shen X, Zhou L, Wang J, Zhang J, Pei R. DNA Triplexes-Guided Assembly of G-Quadruplexes for Constructing Label-free Fluorescent Logic Gates. Chem Asian J 2016; 11:1892-5. [DOI: 10.1002/asia.201600626] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/04/2016] [Indexed: 12/11/2022]
Affiliation(s)
- Lijun Xu
- Key Laboratory of Nano-Bio Interface; Division of Nanobiomedicine; Suzhou Institute of Nano-Tech and Nano-Bionics; Chinese Academy of Sciences; Suzhou 215123 China
- University of Chinese Academy of Sciences; Beijing 100049 China
| | - Shanni Hong
- Key Laboratory of Nano-Bio Interface; Division of Nanobiomedicine; Suzhou Institute of Nano-Tech and Nano-Bionics; Chinese Academy of Sciences; Suzhou 215123 China
- University of Chinese Academy of Sciences; Beijing 100049 China
| | - Xiaoqiang Shen
- Key Laboratory of Nano-Bio Interface; Division of Nanobiomedicine; Suzhou Institute of Nano-Tech and Nano-Bionics; Chinese Academy of Sciences; Suzhou 215123 China
- School of Chemistry and Molecular Engineering; Zhengzhou University; Zhengzhou 450001 China
| | - Lu Zhou
- Key Laboratory of Nano-Bio Interface; Division of Nanobiomedicine; Suzhou Institute of Nano-Tech and Nano-Bionics; Chinese Academy of Sciences; Suzhou 215123 China
| | - Jine Wang
- Key Laboratory of Nano-Bio Interface; Division of Nanobiomedicine; Suzhou Institute of Nano-Tech and Nano-Bionics; Chinese Academy of Sciences; Suzhou 215123 China
| | - Jianye Zhang
- School of Chemistry and Molecular Engineering; Zhengzhou University; Zhengzhou 450001 China
| | - Renjun Pei
- Key Laboratory of Nano-Bio Interface; Division of Nanobiomedicine; Suzhou Institute of Nano-Tech and Nano-Bionics; Chinese Academy of Sciences; Suzhou 215123 China
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28
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Wu C, Fan D, Zhou C, Liu Y, Wang E. Colorimetric Strategy for Highly Sensitive and Selective Simultaneous Detection of Histidine and Cysteine Based on G-Quadruplex-Cu(II) Metalloenzyme. Anal Chem 2016; 88:2899-903. [DOI: 10.1021/acs.analchem.5b04796] [Citation(s) in RCA: 91] [Impact Index Per Article: 10.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Affiliation(s)
- Changtong Wu
- State
Key Laboratory of Electroanalytical Chemistry, Changchun Institute
of Applied Chemistry, Chinese Academy of Sciences, Changchun, Jilin 130022, China
- Department of Chemistry and Environmental
Engineering, Changchun University of Science and Technology, Changchun, Jilin 130022, China
| | - Daoqing Fan
- State
Key Laboratory of Electroanalytical Chemistry, Changchun Institute
of Applied Chemistry, Chinese Academy of Sciences, Changchun, Jilin 130022, China
| | - Chunyang Zhou
- State
Key Laboratory of Electroanalytical Chemistry, Changchun Institute
of Applied Chemistry, Chinese Academy of Sciences, Changchun, Jilin 130022, China
| | - Yaqing Liu
- Key
Laboratory of Food Nutrition and Safety, Tianjin University of Science and Technology, Ministry of Education, Tianjin 300457, China
| | - Erkang Wang
- State
Key Laboratory of Electroanalytical Chemistry, Changchun Institute
of Applied Chemistry, Chinese Academy of Sciences, Changchun, Jilin 130022, China
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29
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Lu L, Wang W, Yang C, Kang TS, Leung CH, Ma DL. Iridium(iii) complexes with 1,10-phenanthroline-based N^N ligands as highly selective luminescent G-quadruplex probes and application for switch-on ribonuclease H detection. J Mater Chem B 2016; 4:6791-6796. [DOI: 10.1039/c6tb02316a] [Citation(s) in RCA: 35] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
A study was performed to investigate the relationship between molecular structure and G4 sensing ability for a series of iridium(iii) complexes. The complex7was used to construct a G4-based assay for RNase H.
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Affiliation(s)
- Lihua Lu
- College of Chemistry and Pharmaceutical Sciences
- Qingdao Agricultural University
- Qingdao 266109
- China
- Department of Chemistry
| | - Wanhe Wang
- Department of Chemistry
- Hong Kong Baptist University
- Hong Kong
- China
| | - Chao Yang
- State Key Laboratory of Quality Research in Chinese Medicine
- Institute of Chinese Medical Sciences
- University of Macau
- Macao
- China
| | - Tian-Shu Kang
- State Key Laboratory of Quality Research in Chinese Medicine
- Institute of Chinese Medical Sciences
- University of Macau
- Macao
- China
| | - Chung-Hang Leung
- State Key Laboratory of Quality Research in Chinese Medicine
- Institute of Chinese Medical Sciences
- University of Macau
- Macao
- China
| | - Dik-Lung Ma
- Department of Chemistry
- Hong Kong Baptist University
- Hong Kong
- China
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30
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Li Y, Liao C, Huang S, Xu H, Zheng B, Du J, Xiao D. A selective fluorescent probe based on bis-Schiff base for “turn-on” detection of Al3+and cysteine by different mechanisms. RSC Adv 2016. [DOI: 10.1039/c6ra02030e] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
A novel fluorescent sensorLbased on phenolphthalein derivative bis-Schiff base for “turn-on” detection of Al3+and cysteine on different mechanisms.
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Affiliation(s)
- Yang Li
- Department of Chemistry
- Sichuan University
- Chengdu 610064
- China
| | - Caiyun Liao
- Department of Chemistry
- Sichuan University
- Chengdu 610064
- China
| | - Shanshan Huang
- Department of Chemistry
- Sichuan University
- Chengdu 610064
- China
| | - Hui Xu
- Department of Chemistry
- Sichuan University
- Chengdu 610064
- China
| | - Baozhan Zheng
- Department of Chemistry
- Sichuan University
- Chengdu 610064
- China
| | - Juan Du
- Department of Chemistry
- Sichuan University
- Chengdu 610064
- China
| | - Dan Xiao
- Department of Chemistry
- Sichuan University
- Chengdu 610064
- China
- Department of Chemical Engineering
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31
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Wang J, Liu HB, Tong Z, Ha CS. Fluorescent/luminescent detection of natural amino acids by organometallic systems. Coord Chem Rev 2015. [DOI: 10.1016/j.ccr.2015.05.008] [Citation(s) in RCA: 96] [Impact Index Per Article: 9.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
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32
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Recent Developments in G-Quadruplex Probes. ACTA ACUST UNITED AC 2015; 22:812-28. [DOI: 10.1016/j.chembiol.2015.06.016] [Citation(s) in RCA: 136] [Impact Index Per Article: 13.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/24/2015] [Revised: 06/09/2015] [Accepted: 06/10/2015] [Indexed: 11/24/2022]
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33
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Zheng S, Vuong BQ, Vaidyanathan B, Lin JY, Huang FT, Chaudhuri J. Non-coding RNA Generated following Lariat Debranching Mediates Targeting of AID to DNA. Cell 2015; 161:762-73. [PMID: 25957684 PMCID: PMC4426339 DOI: 10.1016/j.cell.2015.03.020] [Citation(s) in RCA: 144] [Impact Index Per Article: 14.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2014] [Revised: 12/31/2014] [Accepted: 02/27/2015] [Indexed: 12/20/2022]
Abstract
Transcription through immunoglobulin switch (S) regions is essential for class switch recombination (CSR), but no molecular function of the transcripts has been described. Likewise, recruitment of activation-induced cytidine deaminase (AID) to S regions is critical for CSR; however, the underlying mechanism has not been fully elucidated. Here, we demonstrate that intronic switch RNA acts in trans to target AID to S region DNA. AID binds directly to switch RNA through G-quadruplexes formed by the RNA molecules. Disruption of this interaction by mutation of a key residue in the putative RNA-binding domain of AID impairs recruitment of AID to S region DNA, thereby abolishing CSR. Additionally, inhibition of RNA lariat processing leads to loss of AID localization to S regions and compromises CSR; both defects can be rescued by exogenous expression of switch transcripts in a sequence-specific manner. These studies uncover an RNA-mediated mechanism of targeting AID to DNA.
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Affiliation(s)
- Simin Zheng
- Immunology Program, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA; Immunology and Microbial Pathogenesis Program, Weill Cornell Graduate School of Medical Sciences, New York, NY 10065, USA
| | - Bao Q Vuong
- Immunology Program, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA; Department of Biology, City College of New York, New York, NY 10031, USA
| | - Bharat Vaidyanathan
- Immunology Program, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA; Immunology and Microbial Pathogenesis Program, Weill Cornell Graduate School of Medical Sciences, New York, NY 10065, USA
| | - Jia-Yu Lin
- Department of Biochemical Science and Technology, College of Life Science, National Taiwan University, Taipei 106, Taiwan
| | - Feng-Ting Huang
- Department of Biochemical Science and Technology, College of Life Science, National Taiwan University, Taipei 106, Taiwan
| | - Jayanta Chaudhuri
- Immunology Program, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA; Immunology and Microbial Pathogenesis Program, Weill Cornell Graduate School of Medical Sciences, New York, NY 10065, USA.
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34
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Highly selective “Off–On” fluorescent probe for histidine and its imaging in living cells. Biosens Bioelectron 2015; 66:259-65. [DOI: 10.1016/j.bios.2014.11.005] [Citation(s) in RCA: 39] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2014] [Revised: 11/01/2014] [Accepted: 11/04/2014] [Indexed: 01/14/2023]
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35
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Cu2+ modulated silver nanoclusters as an on–off–on fluorescence probe for the selective detection of l-histidine. Biosens Bioelectron 2015; 66:103-8. [DOI: 10.1016/j.bios.2014.11.013] [Citation(s) in RCA: 55] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2014] [Revised: 10/23/2014] [Accepted: 11/09/2014] [Indexed: 12/28/2022]
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36
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Wu C, Wang K, Fan D, Zhou C, Liu Y, Wang E. Enzyme-free and DNA-based multiplexer and demultiplexer. Chem Commun (Camb) 2015; 51:15940-3. [DOI: 10.1039/c5cc05565b] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A DNA-based 2:1 multiplexer and 1:2 demultiplexer have been conceptually realized in enzyme-free conditions.
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Affiliation(s)
- Changtong Wu
- State Key Laboratory of Electroanalytical Chemistry
- Changchun Institute of Applied Chemistry
- Chinese Academy of Sciences
- Changchun
- P. R. China
| | - Kun Wang
- State Key Laboratory of Electroanalytical Chemistry
- Changchun Institute of Applied Chemistry
- Chinese Academy of Sciences
- Changchun
- P. R. China
| | - Daoqing Fan
- State Key Laboratory of Electroanalytical Chemistry
- Changchun Institute of Applied Chemistry
- Chinese Academy of Sciences
- Changchun
- P. R. China
| | - Chunyang Zhou
- State Key Laboratory of Electroanalytical Chemistry
- Changchun Institute of Applied Chemistry
- Chinese Academy of Sciences
- Changchun
- P. R. China
| | - Yaqing Liu
- State Key Laboratory of Electroanalytical Chemistry
- Changchun Institute of Applied Chemistry
- Chinese Academy of Sciences
- Changchun
- P. R. China
| | - Erkang Wang
- State Key Laboratory of Electroanalytical Chemistry
- Changchun Institute of Applied Chemistry
- Chinese Academy of Sciences
- Changchun
- P. R. China
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37
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ZENG Y, ZHANG G, ZHANG D. A Tetraphenylethylene-based Fluorescent Chemosensor for Cu 2+ in Aqueous Solution and Its Potential Application to Detect Histidine. ANAL SCI 2015; 31:191-5. [DOI: 10.2116/analsci.31.191] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Affiliation(s)
- Yan ZENG
- National Engineering Laboratory for Industrial Enzymes, Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences
| | - Guanxin ZHANG
- Beijing National Laboratory for Molecular Sciences, Organic Solids Laboratory, Institute of Chemistry, Chinese Academy of Sciences
| | - Deqing ZHANG
- Beijing National Laboratory for Molecular Sciences, Organic Solids Laboratory, Institute of Chemistry, Chinese Academy of Sciences
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38
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Bhasikuttan AC, Mohanty J. Targeting G-quadruplex structures with extrinsic fluorogenic dyes: promising fluorescence sensors. Chem Commun (Camb) 2015; 51:7581-97. [DOI: 10.1039/c4cc10030a] [Citation(s) in RCA: 128] [Impact Index Per Article: 12.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
This article provides a brief account of the recent reports on the fluorescence properties of some of the fluorogenic dyes towards G-quadruplex DNAs, which have been turned into promising bio-analytical methods.
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Affiliation(s)
| | - Jyotirmayee Mohanty
- Radiation & Photochemistry Division
- Bhabha Atomic Research Centre
- Mumbai 400 085
- India
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39
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Wang HB, Zhang HD, Chen Y, Liu YM. Inhibition of double-stranded DNA templated copper nanoparticles as label-free fluorescent sensors for l-histidine detection. NEW J CHEM 2015. [DOI: 10.1039/c5nj01847a] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A label-free fluorescent sensing strategy was reported for l-histidine detection by the inhibition of double-stranded DNA templated copper nanoparticles.
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Affiliation(s)
- Hai-Bo Wang
- College of Chemistry and Chemical Engineering
- Xinyang Normal University
- Xinyang 464000
- P. R. China
| | - Hong-Ding Zhang
- College of Chemistry and Chemical Engineering
- Xinyang Normal University
- Xinyang 464000
- P. R. China
| | - Ying Chen
- College of Chemistry and Chemical Engineering
- Xinyang Normal University
- Xinyang 464000
- P. R. China
| | - Yan-Ming Liu
- College of Chemistry and Chemical Engineering
- Xinyang Normal University
- Xinyang 464000
- P. R. China
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40
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Sensitive detection of biothiols and histidine based on the recovered fluorescence of the carbon quantum dots-Hg(II) system. Anal Chim Acta 2014; 859:72-8. [DOI: 10.1016/j.aca.2014.12.021] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/17/2014] [Revised: 12/01/2014] [Accepted: 12/10/2014] [Indexed: 12/11/2022]
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41
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Wang K, Ren J, Fan D, Liu Y, Wang E. Integration of graphene oxide and DNA as a universal platform for multiple arithmetic logic units. Chem Commun (Camb) 2014; 50:14390-3. [DOI: 10.1039/c4cc06033d] [Citation(s) in RCA: 41] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Multiple logic gates were integrated on a universal GO–DNA platform to implement both half adder and half subtractor functions.
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Affiliation(s)
- Kun Wang
- State Key Laboratory of Electroanalytical Chemistry
- Changchun Institute of Applied Chemistry
- Chinese Academy of Sciences
- Changchun 130022, China
- University of Chinese Academy of Sciences
| | - Jiangtao Ren
- State Key Laboratory of Electroanalytical Chemistry
- Changchun Institute of Applied Chemistry
- Chinese Academy of Sciences
- Changchun 130022, China
- University of Chinese Academy of Sciences
| | - Daoqing Fan
- State Key Laboratory of Electroanalytical Chemistry
- Changchun Institute of Applied Chemistry
- Chinese Academy of Sciences
- Changchun 130022, China
- University of Chinese Academy of Sciences
| | - Yaqing Liu
- State Key Laboratory of Electroanalytical Chemistry
- Changchun Institute of Applied Chemistry
- Chinese Academy of Sciences
- Changchun 130022, China
- University of Chinese Academy of Sciences
| | - Erkang Wang
- State Key Laboratory of Electroanalytical Chemistry
- Changchun Institute of Applied Chemistry
- Chinese Academy of Sciences
- Changchun 130022, China
- University of Chinese Academy of Sciences
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42
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Carbon dots as fluorescent probes for “off–on” detection of Cu2+ and l-cysteine in aqueous solution. Biosens Bioelectron 2014; 51:330-5. [DOI: 10.1016/j.bios.2013.07.042] [Citation(s) in RCA: 242] [Impact Index Per Article: 22.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/18/2013] [Accepted: 07/22/2013] [Indexed: 12/12/2022]
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43
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Hu Y, Wang Q, Zheng C, Wu L, Hou X, Lv Y. Recyclable Decoration of Amine-Functionalized Magnetic Nanoparticles with Ni2+ for Determination of Histidine by Photochemical Vapor Generation Atomic Spectrometry. Anal Chem 2013; 86:842-8. [DOI: 10.1021/ac403378d] [Citation(s) in RCA: 42] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Yuan Hu
- Key Laboratory of Green Chemistry & Technology of MOE, College of Chemistry, and ‡Analytical & Testing Center, Sichuan University, Chengdu, Sichuan 610064, China
| | - Qi Wang
- Key Laboratory of Green Chemistry & Technology of MOE, College of Chemistry, and ‡Analytical & Testing Center, Sichuan University, Chengdu, Sichuan 610064, China
| | - Chengbin Zheng
- Key Laboratory of Green Chemistry & Technology of MOE, College of Chemistry, and ‡Analytical & Testing Center, Sichuan University, Chengdu, Sichuan 610064, China
| | - Li Wu
- Key Laboratory of Green Chemistry & Technology of MOE, College of Chemistry, and ‡Analytical & Testing Center, Sichuan University, Chengdu, Sichuan 610064, China
| | - Xiandeng Hou
- Key Laboratory of Green Chemistry & Technology of MOE, College of Chemistry, and ‡Analytical & Testing Center, Sichuan University, Chengdu, Sichuan 610064, China
| | - Yi Lv
- Key Laboratory of Green Chemistry & Technology of MOE, College of Chemistry, and ‡Analytical & Testing Center, Sichuan University, Chengdu, Sichuan 610064, China
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44
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G-quadruplexes as sensing probes. Molecules 2013; 18:14760-79. [PMID: 24288003 PMCID: PMC6270327 DOI: 10.3390/molecules181214760] [Citation(s) in RCA: 59] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/09/2013] [Revised: 11/13/2013] [Accepted: 11/13/2013] [Indexed: 01/09/2023] Open
Abstract
Guanine-rich sequences of DNA are able to create tetrastranded structures known as G-quadruplexes; they are formed by the stacking of planar G-quartets composed of four guanines paired by Hoogsteen hydrogen bonding. G-quadruplexes act as ligands for metal ions and aptamers for various molecules. Interestingly, the G-quadruplexes form a complex with anionic porphyrin hemin and exhibit peroxidase-like activity. This review focuses on overview of sensing techniques based on G-quadruplex complexes with anionic porphyrins for detection of various analytes, including metal ions such as K+, Ca2+, Ag+, Hg2+, Cu2+, Pb2+, Sr2+, organic molecules, nucleic acids, and proteins. Principles of G-quadruplex-based detection methods involve DNA conformational change caused by the presence of analyte which leads to a decrease or an increase in peroxidase activity, fluorescence, or electrochemical signal of the used probe. The advantages of various detection techniques are also discussed.
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45
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Ai J, Xu Y, Lou B, Li D, Wang E. Multifunctional AS1411-functionalized fluorescent gold nanoparticles for targeted cancer cell imaging and efficient photodynamic therapy. Talanta 2013; 118:54-60. [PMID: 24274270 DOI: 10.1016/j.talanta.2013.09.062] [Citation(s) in RCA: 63] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2013] [Revised: 09/20/2013] [Accepted: 09/23/2013] [Indexed: 01/28/2023]
Abstract
Herein, one multifunctional AS1411-functionalized fluorescent gold nanoparticles (named NAANPs) is synthesized and successfully applied for both targeted cancer cell imaging and efficient photodynamic therapy (PDT). The NAANPs are obtained by functionalizing the gold nanoparticles with AS1411 aptamer and then bound with one porphyrin derivative N-methylmesoporphyrin IX (NMM). Using HeLa cells over expressing nucleolin as representative cancer cells, the formed NAANPs can target to the cell surface via the specific AS1411-nucleolin interaction, which can discriminate the cancer cells from normal ones (e.g. HEK293) unambiguously. That the fluorescence intensity of NMM increased significantly upon binding to AS1411 G-quadruplex makes the NAANPs appropriate fluorescence reagent for cell imaging. Meanwhile, NMM can also be used as a photosensitizer, thus irradiation of the NAANPs by the white light from a common electric torch can lead to efficient production of cytotoxic reactive oxygen species for establishing a new type of PDT to cancer cells. Gold nanoparticles play the roles of both carrier and enhancer of the functional groups onto the cells. In addition, they not only possess inherently certain cytotoxicity to the cancer cells, but also boost the cellular uptake of the fluorescent groups. As a result, the efficiency of both the targeted cell imaging and PDT could be ensured.
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Affiliation(s)
- Jun Ai
- State Key Laboratory of Electroanalytical Chemistry, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, Changchun, Jilin 130022, PR China
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46
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Guo Y, Xu P, Hu H, Zhou X, Hu J. A label-free biosensor for DNA detection based on ligand-responsive G-quadruplex formation. Talanta 2013; 114:138-42. [DOI: 10.1016/j.talanta.2013.04.003] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/16/2013] [Revised: 03/24/2013] [Accepted: 04/04/2013] [Indexed: 11/30/2022]
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47
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He HZ, Wang M, Chan DSH, Leung CH, Qiu JW, Ma DL. A label-free G-quadruplex-based luminescent switch-on assay for the selective detection of histidine. Methods 2013; 64:205-11. [PMID: 23891801 DOI: 10.1016/j.ymeth.2013.07.023] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2013] [Revised: 07/14/2013] [Accepted: 07/15/2013] [Indexed: 12/16/2022] Open
Abstract
A label-free G-quadruplex-based luminescent switch-on assay has been developed for the selective detection of micromolar histidine in aqueous solution. In this study, an iridium(III) complex was employed as a G-quadruplex-specific luminescent probe while a guanine-rich oligonucleotide (Pu27, 5'-TG4AG3TG4AG3TG4A2G2-3')/cupric ion (Cu(2+)) ensemble was employed as a recognition unit for histidine. The initial luminescence of the iridium(III) complex in the presence of G-quadruplex DNA is effectively quenched by Cu(2+) ions due to the Cu(2+)-mediated unfolding of the G-quadruplex motif. The addition of histidine sequesters Cu(2+) ions from the ensemble, thereby restoring the luminescence of the system. The assay could detect down to 1 μM of histidine in aqueous media, and also exhibited good selectivity for histidine over other amino acids with the use of the cysteine, masking agent N-ethylmaleimide. Furthermore, the application of the assay for the detection of histidine in diluted urine samples was demonstrated.
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Affiliation(s)
- Hong-Zhang He
- Department of Chemistry, Hong Kong Baptist University, Kowloon Tong, Hong Kong, China
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48
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Tong LL, Li L, Chen Z, Wang Q, Tang B. Stable label-free fluorescent sensing of biothiols based on ThT direct inducing conformation-specific G-quadruplex. Biosens Bioelectron 2013; 49:420-5. [PMID: 23807235 DOI: 10.1016/j.bios.2013.05.051] [Citation(s) in RCA: 41] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/23/2013] [Revised: 05/29/2013] [Accepted: 05/29/2013] [Indexed: 10/26/2022]
Abstract
In this work, a new, label-free, turn-on fluorescent sensor for biothiols detection based on ThT direct inducing conformation-specific G-quadruplex is developed. The sensing approach is based on a conformational switch of oligonucleotide controlled by Hg(2+) and a commercially available water-soluble fluorescent dye, Thioflavin T (ThT). A noticeable fluorescence light-up in ThT on binding to the G-quadruplex grants the sensor excellent sensitivity. The specific quadruplex conformation induced directly by ThT and pronounced structural selectivity of ThT for G-quadruplexes could generate more stable luminescence and make sure high specificity in complex biological samples. The present assay allows for the selective determination of cysteine and glutathione in the range of 2.0 × 10(-8)-2.5 × 10(-6)M and 3.0 × 10(-8)-2.0 × 10(-6)M with a detection limit of 8.4 nM and 13.9 nM respectively. The diagnostic capability and potential in practical applications of this method have been demonstrated by detecting biothiols in human blood serum.
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Affiliation(s)
- Li-li Tong
- College of Chemistry, Chemical Engineering and Materials Science, Engineering Research Center of Pesticide and Medicine Intermediate Clean Production, , Shandong Normal University, Jinan 250014, PR China
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49
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He HZ, Chan DSH, Leung CH, Ma DL. G-quadruplexes for luminescent sensing and logic gates. Nucleic Acids Res 2013; 41:4345-59. [PMID: 23435319 PMCID: PMC3632106 DOI: 10.1093/nar/gkt108] [Citation(s) in RCA: 143] [Impact Index Per Article: 11.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/02/2013] [Revised: 02/03/2013] [Accepted: 02/04/2013] [Indexed: 01/06/2023] Open
Abstract
G-quadruplexes represent a versatile sensing platform for the construction of label-free molecular detection assays owing to their diverse structures that can be selectively recognized by G-quadruplex-specific luminescent probes. In this Survey and Summary, we highlight recent examples of the application of the label-free strategy for the development of G-quadruplex-based luminescent detection platforms with a view towards the potential application of tetraplex structures in the design of DNA logic gates.
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Affiliation(s)
- Hong-Zhang He
- Department of Chemistry, Hong Kong Baptist University, Kowloon Tong, Hong Kong, China and State Key Laboratory of Quality Research in Chinese Medicine, Institute of Chinese Medical Sciences, University of Macau, Macao SAR, China
| | - Daniel Shiu-Hin Chan
- Department of Chemistry, Hong Kong Baptist University, Kowloon Tong, Hong Kong, China and State Key Laboratory of Quality Research in Chinese Medicine, Institute of Chinese Medical Sciences, University of Macau, Macao SAR, China
| | - Chung-Hang Leung
- Department of Chemistry, Hong Kong Baptist University, Kowloon Tong, Hong Kong, China and State Key Laboratory of Quality Research in Chinese Medicine, Institute of Chinese Medical Sciences, University of Macau, Macao SAR, China
| | - Dik-Lung Ma
- Department of Chemistry, Hong Kong Baptist University, Kowloon Tong, Hong Kong, China and State Key Laboratory of Quality Research in Chinese Medicine, Institute of Chinese Medical Sciences, University of Macau, Macao SAR, China
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