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Wang YW, Nambeesan SU. Ethylene promotes fruit ripening initiation by downregulating photosynthesis, enhancing abscisic acid and suppressing jasmonic acid in blueberry (Vaccinium ashei). BMC Plant Biol 2024; 24:418. [PMID: 38760720 PMCID: PMC11102277 DOI: 10.1186/s12870-024-05106-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/06/2023] [Accepted: 05/05/2024] [Indexed: 05/19/2024]
Abstract
BACKGROUND Blueberry fruit exhibit atypical climacteric ripening with a non-auto-catalytic increase in ethylene coincident with initiation of ripening. Further, application of ethephon, an ethylene-releasing plant growth regulator, accelerates ripening by increasing the proportion of ripe (blue) fruit as compared to the control treatment. To investigate the mechanistic role of ethylene in regulating blueberry ripening, we performed transcriptome analysis on fruit treated with ethephon, an ethylene-releasing plant growth regulator. RESULTS RNA-Sequencing was performed on two sets of rabbiteye blueberry ('Powderblue') fruit: (1) fruit from divergent developmental stages; and (2) fruit treated with ethephon, an ethylene-releasing compound. Differentially expressed genes (DEGs) from divergent developmental stages clustered into nine groups, among which cluster 1 displayed reduction in expression during ripening initiation and was enriched with photosynthesis related genes, while cluster 7 displayed increased expression during ripening and was enriched with aromatic-amino acid family catabolism genes, suggesting stimulation of anthocyanin biosynthesis. More DEGs were apparent at 1 day after ethephon treatment suggesting its early influence during ripening initiation. Overall, a higher number of genes were downregulated in response to ethylene. Many of these overlapped with cluster 1 genes, indicating that ethylene-mediated downregulation of photosynthesis is an important developmental event during the ripening transition. Analyses of DEGs in response to ethylene also indicated interplay among phytohormones. Ethylene positively regulated abscisic acid (ABA), negatively regulated jasmonates (JAs), and influenced auxin (IAA) metabolism and signaling genes. Phytohormone quantification supported these effects of ethylene, indicating coordination of blueberry fruit ripening by ethylene. CONCLUSION This study provides insights into the role of ethylene in blueberry fruit ripening. Ethylene initiates blueberry ripening by downregulating photosynthesis-related genes. Also, ethylene regulates phytohormone-metabolism and signaling related genes, increases ABA, and decreases JA concentrations. Together, these results indicate that interplay among multiple phytohormones regulates the progression of ripening, and that ethylene is an important coordinator of such interactions during blueberry fruit ripening.
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Affiliation(s)
- Yi-Wen Wang
- Department of Horticulture, University of Georgia, 1111 Miller Plant Sciences Building, Athens, GA, 30602, USA
- Center for Applied Genetic Technologies, University of Georgia, 111 Riverbend Road, Athens, GA, 30602, USA
- Institute of Plant Breeding, Genetics & Genomics, University of Georgia, 111 Riverbend Road, Athens, GA, 30602, USA
| | - Savithri U Nambeesan
- Department of Horticulture, University of Georgia, 1111 Miller Plant Sciences Building, Athens, GA, 30602, USA.
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Chen M, Cao X, Huang Y, Zou W, Liang X, Yang Y, Wang Y, Wei J, Li H. The bZIP transcription factor MpbZIP9 regulates anthocyanin biosynthesis in Malus 'Pinkspire' fruit. Plant Sci 2024; 342:112038. [PMID: 38367821 DOI: 10.1016/j.plantsci.2024.112038] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/26/2023] [Revised: 02/03/2024] [Accepted: 02/13/2024] [Indexed: 02/19/2024]
Abstract
Malus 'Pinkspire' is regulated by abscisic acid (ABA), which results in a red colour, but the regulatory relationship between ABA and anthocyanin synthesis has not been determined. The key factors affecting the colour change of M. 'Pinkspire' peel were investigated during the periods of significant colour changes during fruit ripening. The results showed that the transcription factor MpbZIP9 associated with ABA was screened by transcriptomic analysis. MpbZIP9 expression was consistent with the trend of structural genes expression for anthocyanin synthesis in the peel during fruit ripening, as well as with changes in the content of ABA, which is a positive regulator. A yeast one-hybrid assay showed that MpbZIP9 can directly bind to the promoter of MpF3'H. Dual luciferase reporter gene assays and GUS staining experiments showed that MpbZIP9 significantly activate MpF3'H expression. In addition, overexpression of the MpbZIP9 significantly enhanced anthocyanin accumulation and the expression of genes involved in anthocyanin synthesis. In contrast, virus-induced silencing of the MpbZIP9 significantly reduced the expression of structural genes involved in anthocyanin synthesis. These results suggest that the MpbZIP9 transcription factor can regulate the synthesis of peel anthocyanin and is a positive regulator that promotes anthocyanin biosynthesis by activating MpF3'H expression.
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Affiliation(s)
- Mingkun Chen
- College of Landscape Architecture and Art, Northwest A&F University, Yangling, Shaanxi 712100, China
| | - Xiaoyun Cao
- College of Landscape Architecture and Art, Northwest A&F University, Yangling, Shaanxi 712100, China
| | - Yuanxing Huang
- College of Landscape Architecture and Art, Northwest A&F University, Yangling, Shaanxi 712100, China
| | - Wenting Zou
- College of Landscape Architecture and Art, Northwest A&F University, Yangling, Shaanxi 712100, China
| | - Xiaolong Liang
- College of Landscape Architecture and Art, Northwest A&F University, Yangling, Shaanxi 712100, China
| | - Yue Yang
- College of Landscape Architecture and Art, Northwest A&F University, Yangling, Shaanxi 712100, China
| | - Yu Wang
- College of Landscape Architecture and Art, Northwest A&F University, Yangling, Shaanxi 712100, China
| | - Jun Wei
- College of Landscape Architecture and Art, Northwest A&F University, Yangling, Shaanxi 712100, China
| | - Houhua Li
- College of Landscape Architecture and Art, Northwest A&F University, Yangling, Shaanxi 712100, China.
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Alsharairi NA. A Review with a Focus on Vaccinium-Berries-Derived Bioactive Compounds for the Treatment of Reproductive Cancers. Plants (Basel) 2024; 13:1047. [PMID: 38611574 PMCID: PMC11013621 DOI: 10.3390/plants13071047] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/12/2024] [Revised: 04/01/2024] [Accepted: 04/07/2024] [Indexed: 04/14/2024]
Abstract
Cancers of the reproductive organs, including prostate, bladder, ovarian, and cervical cancers, are considered the most common causes of death in both sexes worldwide. The genus Vaccinium L. (Ericaceae) comprises fleshy berry crop species, including cranberries, blueberries, lingonberries, bilberries, and bog bilberries, and are widely distributed in many countries. Flavonols, anthocyanins (ACNs), proanthocyanidins (PACs), and phenolic acids are the most bioactive compounds naturally found in Vaccinium berries and have been extensively used as anticancer agents. However, it remains uncertain whether Vaccinium bioactives have a therapeutic role in reproductive cancers (RCs), and how these bioactives could be effective in modulating RC-related signalling pathways/molecular genes. Therefore, this article aims to review existing evidence in the PubMed/MEDLINE database on Vaccinium berries' major bioactive compounds in RC treatment and unravel the mechanisms underlying this process.
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Affiliation(s)
- Naser A Alsharairi
- Heart, Mind and Body Research Group, Griffith University, Gold Coast, QLD 4222, Australia
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4
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Wu W, Cao SF, Shi LY, Chen W, Yin XR, Yang ZF. Abscisic acid biosynthesis, metabolism and signaling in ripening fruit. Front Plant Sci 2023; 14:1279031. [PMID: 38126013 PMCID: PMC10731311 DOI: 10.3389/fpls.2023.1279031] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/17/2023] [Accepted: 11/24/2023] [Indexed: 12/23/2023]
Abstract
Fruits are highly recommended nowadays in human diets because they are rich in vitamins, minerals, fibers and other necessary nutrients. The final stage of fruit production, known as ripening, plays a crucial role in determining the fruit's quality and commercial value. This is a complex physiological process, which involves many phytohormones and regulatory factors. Among the phytohormones involved in fruit ripening, abscisic acid (ABA) holds significant importance. ABA levels generally increase during the ripening process in most fruits, and applying ABA externally can enhance fruit flavor, hasten softening, and promote color development through complex signal regulation. Therefore, gaining a deeper understanding of ABA's mechanisms in fruit ripening is valuable for regulating various fruit characteristics, making them more suitable for consumption or storage. This, in turn, can generate greater economic benefits and reduce postharvest losses. This article provides an overview of the relationship between ABA and fruit ripening. It summarizes the effects of ABA on ripening related traits, covering the biochemical aspects and the underlying molecular mechanisms. Additionally, the article discusses the interactions of ABA with other phytohormones during fruit ripening, especially ethylene, and provides perspectives for future exploration in this field.
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Affiliation(s)
- Wei Wu
- College of Biological and Environmental Sciences, Zhejiang Wanli University, Ningbo, Zhejiang, China
- College of Food Science and Engineering, Ocean University of China, Qingdao, Shandong, China
| | - Shi-feng Cao
- College of Biological and Environmental Sciences, Zhejiang Wanli University, Ningbo, Zhejiang, China
| | - Li-yu Shi
- College of Biological and Environmental Sciences, Zhejiang Wanli University, Ningbo, Zhejiang, China
| | - Wei Chen
- College of Biological and Environmental Sciences, Zhejiang Wanli University, Ningbo, Zhejiang, China
| | - Xue-ren Yin
- Zhejiang Provincial Key Laboratory of Integrative Biology of Horticultural Plants, Department of Horticulture, Zhejiang University, Hangzhou, Zhejiang, China
| | - Zhen-feng Yang
- College of Biological and Environmental Sciences, Zhejiang Wanli University, Ningbo, Zhejiang, China
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Kishor PBK, Guddimalli R, Kulkarni J, Singam P, Somanaboina AK, Nandimandalam T, Patil S, Polavarapu R, Suravajhala P, Sreenivasulu N, Penna S. Impact of Climate Change on Altered Fruit Quality with Organoleptic, Health Benefit, and Nutritional Attributes. J Agric Food Chem 2023; 71:17510-17527. [PMID: 37943146 DOI: 10.1021/acs.jafc.3c03312] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/10/2023]
Abstract
As a consequence of global climate change, acute water deficit conditions, soil salinity, and high temperature have been on the rise in their magnitude and frequency, which have been found to impact plant growth and development negatively. However, recent evidence suggests that many fruit plants that face moderate abiotic stresses can result in beneficial effects on the postharvest storage characters of the fruits. Salinity, drought, and high temperature conditions stimulate the synthesis of abscisic acid (ABA), and secondary metabolites, which are vital for fruit quality. The secondary metabolites like phenolic acids and anthocyanins that accumulate under abiotic stress conditions have antioxidant activity, and therefore, such fruits have health benefits too. It has been noticed that fruits accumulate more sugar and anthocyanins owing to upregulation of phenylpropanoid pathway enzymes. The novel information that has been generated thus far indicates that the growth environment during fruit development influences the quality components of the fruits. But the quality depends on the trade-offs between productivity, plant defense, and the frequency, duration, and intensity of stress. In this review, we capture the current knowledge of the irrigation practices for optimizing fruit production in arid and semiarid regions and enhancement in the quality of fruit with the application of exogenous ABA and identify gaps that exist in our understanding of fruit quality under abiotic stress conditions.
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Affiliation(s)
- P B Kavi Kishor
- Department of Genetics, Osmania University, Hyderabad 500 007, India
| | | | - Jayant Kulkarni
- Department of Botany, Savithribai Phule Pune University, Pune 411 007, India
| | - Prashant Singam
- Department of Genetics, Osmania University, Hyderabad 500 007, India
| | - Anil Kumar Somanaboina
- Department of Biotechnology, Vignan's Foundation for Science, Technology & Research Deemed to be University, Vadlamudi, Guntur 522 213, Andhra Pradesh, India
| | - Tejaswi Nandimandalam
- Department of Biotechnology, Vignan's Foundation for Science, Technology & Research Deemed to be University, Vadlamudi, Guntur 522 213, Andhra Pradesh, India
| | - Swaroopa Patil
- Department of Botany, Shivaji University, Kolhapur 416 004, Maharashtra, India
| | - Rathnagiri Polavarapu
- Genomix Molecular Diagnostics Pvt. Ltd., Pragathi Nagar, Kukatapally, Hyderabad 500 072, India
| | - Prashanth Suravajhala
- Amrita School of Biotechnology, Amrita Vishwavidyapeetham, Clappana, 690 525, Amritapuri, Vallikavu, Kerala, India & Bioclues.org, Hyderabad, India
| | - Nese Sreenivasulu
- Consumer-Driven Grain Quality and Nutrition Research Unit, International Rice Research Institute, Los Banos, DAPO Box 7777, Metro Manil 1301, Philippines
| | - Suprasanna Penna
- Amity Centre for Nuclear Biotechnology, Amity Institute of Biotechnology, Amity University of Maharashtra, Mumbai 410 206, India
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Ma C, Zhang C, Wang X, Zhu F, Wang X, Zhang M, Duan Y. Alternative Splicing Analysis Revealed the Role of Alpha-Linolenic Acid and Carotenoids in Fruit Development of Osmanthus fragrans. Int J Mol Sci 2023; 24:ijms24108666. [PMID: 37240011 DOI: 10.3390/ijms24108666] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2023] [Revised: 04/26/2023] [Accepted: 05/08/2023] [Indexed: 05/28/2023] Open
Abstract
Alternative splicing refers to the process of producing different splicing isoforms from the same pre-mRNA through different alternative splicing events, which almost participates in all stages of plant growth and development. In order to understand its role in the fruit development of Osmanthus fragrans, transcriptome sequencing and alternative splicing analysis was carried out on three stages of O. fragrans fruit (O. fragrans "Zi Yingui"). The results showed that the proportion of skipping exon events was the highest in all three periods, followed by a retained intron, and the proportion of mutually exclusive exon events was the lowest and most of the alternative splicing events occurred in the first two periods. The results of enrichment analysis of differentially expressed genes and differentially expressed isoforms showed that alpha-Linolenic acid metabolism, flavonoid biosynthesis, carotenoid biosynthesis, photosynthesis, and photosynthetic-antenna protein pathways were significantly enriched, which may play an important role in the fruit development of O. fragrans. The results of this study lay the foundation for further study of the development and maturation of O. fragrans fruit and further ideas for controlling fruit color and improving fruit quality and appearance.
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Affiliation(s)
- Cancan Ma
- Co-Innovation Center for Sustainable Forestry in Southern China, College of Biology and the Environment, International Cultivar Registration Center for Osmanthus, Nanjing Forestry University, Nanjing 210037, China
| | - Cheng Zhang
- Co-Innovation Center for Sustainable Forestry in Southern China, College of Biology and the Environment, International Cultivar Registration Center for Osmanthus, Nanjing Forestry University, Nanjing 210037, China
| | - Xiaoyan Wang
- Co-Innovation Center for Sustainable Forestry in Southern China, College of Biology and the Environment, International Cultivar Registration Center for Osmanthus, Nanjing Forestry University, Nanjing 210037, China
| | - Fuyuan Zhu
- Co-Innovation Center for Sustainable Forestry in Southern China, College of Biology and the Environment, International Cultivar Registration Center for Osmanthus, Nanjing Forestry University, Nanjing 210037, China
| | - Xianrong Wang
- Co-Innovation Center for Sustainable Forestry in Southern China, College of Biology and the Environment, International Cultivar Registration Center for Osmanthus, Nanjing Forestry University, Nanjing 210037, China
| | - Min Zhang
- Co-Innovation Center for Sustainable Forestry in Southern China, College of Biology and the Environment, International Cultivar Registration Center for Osmanthus, Nanjing Forestry University, Nanjing 210037, China
| | - Yifan Duan
- Co-Innovation Center for Sustainable Forestry in Southern China, College of Biology and the Environment, International Cultivar Registration Center for Osmanthus, Nanjing Forestry University, Nanjing 210037, China
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Mihai E, Negreanu-Pirjol BS, Craciunescu O, Ciucan T, Iosageanu A, Seciu-Grama AM, Prelipcean AM, Utoiu E, Coroiu V, Ghenea AM, Negreanu-Pirjol T. In Vitro Hypoglycemic Potential, Antioxidant and Prebiotic Activity after Simulated Digestion of Combined Blueberry Pomace and Chia Seed Extracts. Processes (Basel) 2023. [DOI: 10.3390/pr11041025] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/30/2023] Open
Abstract
This study aimed to evaluate the hypoglycemic potential, antioxidant activity and prebiotic activity of a hydroalcoholic extract of blueberry pomace (BP), an aqueous extract of chia seeds (CS) and a novel combination of BP–CS extracts (BCM) for further use as ingredient of functional food. Spectrometric and HPLC analyses were used to characterize the total phenolic and flavonoid content and composition of BP, while CS was analyzed for total carbohydrate content. Data showed that the BCM mixture exerted an inhibition of α-amylase activity, which was 1.36 times higher than that of BP and 1.25 higher than CS extract. The mixture also showed better scavenging activity of free DPPH radicals than individual extracts, and had an IC50 value of 603.12 µg/mL. In vitro testing indicated that both serum- and colon-reaching products of simulated intestinal digestion of BCM presented the capacity to protect Caco-2 intestinal cells against oxidative stress by inhibition of reactive oxygen species production. In addition, the colon-reaching product of BCM digestion had the capacity to significantly (p < 0.05) stimulate the growth of Lactobacillus rhamnosus and Lactobacillus acidophilus, revealing a prebiotic potential. All these results indicated that improved biological activity of the novel combination of BP and CS extracts could be due to the synergistic action of constituents. The combination is recommended for further testing and the development of novel functional food for controlling type 2 diabetes and gastrointestinal conditions.
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Ji Y, Hu W, Xiu Z, Yang X, Guan Y. Integrated transcriptomics-proteomics analysis reveals the regulatory network of ethanol vapor on softening of postharvest blueberry. Lebensm Wiss Technol 2023. [DOI: 10.1016/j.lwt.2023.114649] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/12/2023]
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9
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Elbar S, Maytal Y, David I, Carmeli-Weissberg M, Shaya F, Barnea-Danino Y, Bustan A, Harpaz-Saad S. Abscisic acid plays a key role in the regulation of date palm fruit ripening. Front Plant Sci 2023; 13:1066142. [PMID: 36874915 PMCID: PMC9981646 DOI: 10.3389/fpls.2022.1066142] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/10/2022] [Accepted: 12/21/2022] [Indexed: 06/18/2023]
Abstract
The date palm (Phoenix dactylifera L.) fruit is of major importance for the nutrition of broad populations in the world's desert strip; yet it is sorely understudied. Understanding the mechanism regulating date fruit development and ripening is essential to customise date crop to the climatic change, which elaborates yield losses due to often too early occurring wet season. This study aimed to uncover the mechanism regulating date fruit ripening. To that end, we followed the natural process of date fruit development and the effects of exogenous hormone application on fruit ripening in the elite cultivar 'Medjool'. The results of the current study indicate that the onset of fruit ripening occurre once the seed had reached maximum dry weight. From this point, fruit pericarp endogenous abscisic acid (ABA) levels consistently increased until fruit harvest. The final stage in fruit ripening, the yellow-to-brown transition, was preceded by an arrest of xylem-mediated water transport into the fruit. Exogenous ABA application enhanced fruit ripening when applied just before the green-to-yellow fruit color transition. Repeated ABA applications hastened various fruit ripening processes, resulting in earlier fruit harvest. The data presented supports a pivotal role for ABA in the regulation of date fruit ripening.
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Affiliation(s)
- Saar Elbar
- The Robert H. Smith Institute of Plant Sciences and Genetics in Agriculture, Hebrew University of Jerusalem, Rehovot, Israel
| | - Yochai Maytal
- The Robert H. Smith Institute of Plant Sciences and Genetics in Agriculture, Hebrew University of Jerusalem, Rehovot, Israel
| | - Itzhak David
- Ramat-Negev Desert Agro-Research Centre, Halutza, Israel
| | - Mira Carmeli-Weissberg
- Department of Fruit Tree Sciences, The Volcani Center, Agricultural Research Organization, Rishon LeZion, Israel
| | - Felix Shaya
- Department of Fruit Tree Sciences, The Volcani Center, Agricultural Research Organization, Rishon LeZion, Israel
| | | | - Amnon Bustan
- Ramat-Negev Desert Agro-Research Centre, Halutza, Israel
| | - Smadar Harpaz-Saad
- The Robert H. Smith Institute of Plant Sciences and Genetics in Agriculture, Hebrew University of Jerusalem, Rehovot, Israel
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Zheng M, Deng Y, Zhou Y, Liu R, Liu Y, Wang H, Zhu W, Zhou Z, Diao J. Multifaceted effects of difenoconazole in tomato fruit ripening: Physiology, flavour and nutritional quality. Plant Physiol Biochem 2023; 194:223-235. [PMID: 36434985 DOI: 10.1016/j.plaphy.2022.11.015] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/12/2022] [Revised: 11/11/2022] [Accepted: 11/13/2022] [Indexed: 06/16/2023]
Abstract
Difenoconazole is widely used in crop growth, however, its effects on the quality of agricultural products are poorly studied. In this study, the application of difenoconazole on tomato plants could increase soluble sugar content, reduce organic acid and raise accumulation of nutrient-related metabolites during late fruit ripening. Consumer surveys in our study showed that the treatment of difenoconazole tomatoes group had higher sweetness and lower acidity, and those tomatoes were preferred by consumers. Alterations in fruit flavor-related attributes were at least in part corroborated by the abundance of transcripts related to sucrose (SlLin5, SlLin7, SlSuS2, SlSuS6, SlSPS1, SlSPS3) and organic acids (CS, ICDH, cMDH) anabolism. Furthermore, the difenoconazole also significantly promoted the expression of phytohormones synthesis genes, and consequently increased abscisic acid and ethylene levels. Our study not only provides theoretical support for the use of difenoconazole on tomatoes at the level of flavor quality and nutritional health, but also provides valuable information on the mechanism of triazole fungicides in the flavor quality of tomato fruits.
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Affiliation(s)
- Meiling Zheng
- Department of Applied Chemistry, China Agricultural University, Yuanmingyuan West Road 2, Beijing, 100193, China
| | - Yue Deng
- Department of Applied Chemistry, China Agricultural University, Yuanmingyuan West Road 2, Beijing, 100193, China
| | - Yihui Zhou
- Center of Disease Control and Prevention, Shijingshan District, Beijing, 100043, China
| | - Rui Liu
- Department of Applied Chemistry, China Agricultural University, Yuanmingyuan West Road 2, Beijing, 100193, China
| | - Yuping Liu
- Department of Applied Chemistry, China Agricultural University, Yuanmingyuan West Road 2, Beijing, 100193, China
| | - Hongmei Wang
- Department of Applied Chemistry, China Agricultural University, Yuanmingyuan West Road 2, Beijing, 100193, China
| | - Wentao Zhu
- Department of Applied Chemistry, China Agricultural University, Yuanmingyuan West Road 2, Beijing, 100193, China
| | - Zhiqiang Zhou
- Department of Applied Chemistry, China Agricultural University, Yuanmingyuan West Road 2, Beijing, 100193, China
| | - Jinling Diao
- Department of Applied Chemistry, China Agricultural University, Yuanmingyuan West Road 2, Beijing, 100193, China.
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11
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Lu X, Chen Z, Liao B, Han G, Shi D, Li Q, Ma Q, Zhu L, Zhu Z, Luo X, Fu S, Ren J. The chromosome-scale genome provides insights into pigmentation in Acer rubrum. Plant Physiol Biochem 2022; 186:322-333. [PMID: 35932656 DOI: 10.1016/j.plaphy.2022.07.007] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/29/2022] [Revised: 06/23/2022] [Accepted: 07/06/2022] [Indexed: 06/15/2023]
Abstract
Acer rubrum L. is one of the most prevalent ornamental species of the genus Acer, due to its straight and tall stems and beautiful leaf colors. For this study, the Oxford Nanopore platform and Hi-C technology were employed to obtain a chromosome-scale genome for A. rubrum. The genome size of A. rubrum was 1.69 Gb with an N50 of 549.44 Kb, and a total of 39 pseudochromosomes were generated with a 99.61% genome. The A. rubrum genome was predicted to have 64644 genes, of which 97.34% were functionally annotated. Genome annotation identified 67.14% as the transposable element (TE) repeat sequence, with long terminal repeats (LTR) being the richest (55.68%). Genome evolution analysis indicated that A. rubrum diverged from A. yangbiense ∼6.34 million years ago. We identified 13 genes related to pigment synthesis in A. rubrum leaves, where the expressions of four ArF3'H genes were consistent with the synthesis of cyanidin (a key pigment) in red leaves. Correlation analysis verified that the pigmentation of A. rubrum leaves was under the coordinated regulation of non-structural carbohydrates and hormones. The genomic sequence of A. rubrum will facilitate genomic breeding research for this species, while providing the valuable utilization of Aceraceae resources.
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Affiliation(s)
- Xiaoyu Lu
- Cultural & Creative College, Anhui Finance & Trade Vocational College, Hefei, 230601, China
| | - Zhu Chen
- Institute of Agricultural Engineering, Anhui Academy of Agricultural Sciences, Hefei, 230031, China
| | - Buyan Liao
- Cultural & Creative College, Anhui Finance & Trade Vocational College, Hefei, 230601, China
| | - Guomin Han
- School of Life Science, Anhui Agricultural University, Hefei, 230036, China
| | - Dan Shi
- Institute of Agricultural Engineering, Anhui Academy of Agricultural Sciences, Hefei, 230031, China
| | - Qianzhong Li
- Institute of Leisure Agriculture, Jiangsu Academy of Agricultural Sciences, Nanjing, 210014, China
| | - Qiuyue Ma
- Institute of Leisure Agriculture, Jiangsu Academy of Agricultural Sciences, Nanjing, 210014, China
| | - Lu Zhu
- Institute of Leisure Agriculture, Jiangsu Academy of Agricultural Sciences, Nanjing, 210014, China
| | - Zhiyong Zhu
- Ningbo City College of Vocational Technology, Ningbo, 315502, China
| | - Xumei Luo
- Anhui Academy of Forestry, Hefei, 230031, China
| | - Songling Fu
- School of Forestry & Landscape Architecture, Anhui Agricultural University, Hefei, 230036, China.
| | - Jie Ren
- Institute of Agricultural Engineering, Anhui Academy of Agricultural Sciences, Hefei, 230031, China.
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12
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Vaneková Z, Rollinger JM. Bilberries: Curative and Miraculous – A Review on Bioactive Constituents and Clinical Research. Front Pharmacol 2022; 13:909914. [PMID: 35847049 PMCID: PMC9277355 DOI: 10.3389/fphar.2022.909914] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2022] [Accepted: 05/31/2022] [Indexed: 11/13/2022] Open
Abstract
Bilberry (Vaccinium myrtillus L.) fruits are an important part of local diets in many countries and are used as a medicinal herb to treat various disorders. Extracts from fruits are often a part of eye health-promoting supplements, whereas extracts from leaves are advertised for type 2 diabetes mellitus and glycemic control. This review provides an overview of the current knowledge of the phytochemical contents of bilberry fruits and leaves and their bioactivities, critically summarizes origins of the health claims and the outcome of clinical trials, with special attention towards those published in the past 10 years. Overall, the three most referenced indications, which are type 2 diabetes mellitus, vision disorders and circulatory diseases, all include contradictory results with no clear conclusion as to the benefits and recommended dosages. Moreover, the indications for vision disorders and diabetes originate from unproven or false claims that have been repeated in research since the 20th century without consistent fact-checking. Beneficial clinical results have been attested for the treatment of dyslipidemia and chronic inflammatory disorders when applied as dietary supplementation of fresh bilberries or as anthocyanin-rich bilberry fruit extracts. However, there is a general lack of double-blinded controlled research with larger sample sizes.
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Affiliation(s)
- Zuzana Vaneková
- Department of Pharmacognosy and Botany, Faculty of Pharmacy, Comenius University, Bratislava, Slovakia
- Department of Pharmaceutical Sciences, Division of Pharmacognosy, University of Vienna, Vienna, Austria
- *Correspondence: Zuzana Vaneková,
| | - Judith M. Rollinger
- Department of Pharmaceutical Sciences, Division of Pharmacognosy, University of Vienna, Vienna, Austria
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13
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Farneti B, Khomenko I, Ajelli M, Emanuelli F, Biasioli F, Giongo L. Ethylene Production Affects Blueberry Fruit Texture and Storability. Front Plant Sci 2022; 13:813863. [PMID: 35401635 PMCID: PMC8990881 DOI: 10.3389/fpls.2022.813863] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/12/2021] [Accepted: 03/09/2022] [Indexed: 06/14/2023]
Abstract
Ethylene, produced endogenously by plants and their organs, can induce a wide array of physiological responses even at very low concentrations. Nevertheless, the role of ethylene in regulating blueberry (Vaccinium spp.) ripening and storability is still unclear although an increase in ethylene production has been observed in several studies during blueberry ripening. To overcome this issue, we evaluated the endogenous ethylene production of a Vaccinium germplasm selection at different fruit ripening stages and after cold storage, considering also textural modifications. Ethylene and texture were further assessed also on a bi-parental full-sib population of 124 accessions obtained by the crossing between "Draper" and "Biloxi", two cultivars characterized by a different chilling requirement and storability performances. Our results were compared with an extensive literature research, carried out to collect all accessible information on published works related to Vaccinium ethylene production and sensitivity. Results of this study illustrate a likely role of ethylene in regulating blueberry shelf life. However, a generalisation valid for all Vaccinium species is not attainable because of the high variability in ethylene production between genotypes, which is strictly genotype-specific. These differences in ethylene production are related with blueberry fruit storage performances based on textural alterations. Specifically, blueberry accessions characterized by the highest ethylene production had a more severe texture decay during storage. Our results support the possibility of tailoring ad hoc preharvest and postharvest strategies to extend blueberry shelf life and quality according with the endogenous ethylene production level of each cultivar.
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Affiliation(s)
- Brian Farneti
- Berries Genetics and Breeding Unit, Research and Innovation Centre, Fondazione Edmund Mach, Trento, Italy
| | - Iuliia Khomenko
- Sensory Quality Unit, Research and Innovation Centre, Fondazione Edmund Mach, Trento, Italy
| | - Matteo Ajelli
- Berries Genetics and Breeding Unit, Research and Innovation Centre, Fondazione Edmund Mach, Trento, Italy
| | - Francesco Emanuelli
- Berries Genetics and Breeding Unit, Research and Innovation Centre, Fondazione Edmund Mach, Trento, Italy
| | - Franco Biasioli
- Sensory Quality Unit, Research and Innovation Centre, Fondazione Edmund Mach, Trento, Italy
| | - Lara Giongo
- Berries Genetics and Breeding Unit, Research and Innovation Centre, Fondazione Edmund Mach, Trento, Italy
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Lafferty DJ, Espley RV, Deng CH, Günther CS, Plunkett B, Turner JL, Jaakola L, Karppinen K, Allan AC, Albert NW. Hierarchical regulation of MYBPA1 by anthocyanin- and proanthocyanidin-related MYB proteins is conserved in Vaccinium species. J Exp Bot 2022; 73:1344-1356. [PMID: 34664645 DOI: 10.1093/jxb/erab460] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/08/2021] [Accepted: 10/17/2021] [Indexed: 05/28/2023]
Abstract
Members of the Vaccinium genus bear fruits rich in anthocyanins, a class of red-purple flavonoid pigments that provide human health benefits, although the localization and concentrations of anthocyanins differ between species: blueberry (V. corymbosum) has white flesh, while bilberry (V. myrtillus) has red flesh. Comparative transcriptomics between blueberry and bilberry revealed that MYBPA1.1 and MYBA1 strongly correlated with the presence of anthocyanins, but were absent or weakly expressed in blueberry flesh. MYBPA1.1 had a biphasic expression profile, correlating with both proanthocyanidin biosynthesis early during fruit development and anthocyanin biosynthesis during berry ripening. MYBPA1.1 was unable to induce anthocyanin or proanthocyanidin accumulation in Nicotiana benthamiana, but activated promoters of flavonoid biosynthesis genes. The MYBPA1.1 promoter is directly activated by MYBA1 and MYBPA2 proteins, which regulate anthocyanins and proanthocyanidins, respectively. Our findings suggest that the lack of VcMYBA1 expression in blueberry flesh results in an absence of VcMYBPA1.1 expression, which are both required for anthocyanin regulation. In contrast, VmMYBA1 is well expressed in bilberry flesh, up-regulating VmMYBPA1.1, allowing coordinated regulation of flavonoid biosynthesis genes and anthocyanin accumulation. The hierarchal model described here for Vaccinium may also occur in a wider group of plants as a means to co-regulate different branches of the flavonoid pathway.
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Affiliation(s)
- Declan J Lafferty
- The New Zealand Institute for Plant and Food Research Limited, Palmerston North, New Zealand
- The University of Auckland, Auckland, New Zealand
| | - Richard V Espley
- The New Zealand Institute for Plant and Food Research Limited, Auckland, New Zealand
| | - Cecilia H Deng
- The New Zealand Institute for Plant and Food Research Limited, Auckland, New Zealand
| | - Catrin S Günther
- The New Zealand Institute for Plant and Food Research Limited, Auckland, New Zealand
| | - Blue Plunkett
- The New Zealand Institute for Plant and Food Research Limited, Auckland, New Zealand
| | - Janice L Turner
- The New Zealand Institute for Plant and Food Research Limited, Motueka, New Zealand
| | - Laura Jaakola
- Department of Arctic and Marine Biology, UiT The Arctic University of Norway, Tromsø, Norway
- NIBIO, Norwegian Institute of Bioeconomy Research, Ås, Norway
| | - Katja Karppinen
- Department of Arctic and Marine Biology, UiT The Arctic University of Norway, Tromsø, Norway
| | - Andrew C Allan
- The University of Auckland, Auckland, New Zealand
- The New Zealand Institute for Plant and Food Research Limited, Auckland, New Zealand
| | - Nick W Albert
- The New Zealand Institute for Plant and Food Research Limited, Palmerston North, New Zealand
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15
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Samkumar A, Karppinen K, Dhakal B, Martinussen I, Jaakola L. Insights into sugar metabolism during bilberry (Vaccinium myrtillus L.) fruit development. Physiol Plant 2022; 174:e13657. [PMID: 35243654 PMCID: PMC9313557 DOI: 10.1111/ppl.13657] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/30/2021] [Revised: 02/17/2022] [Accepted: 03/01/2022] [Indexed: 06/12/2023]
Abstract
Bilberry fruit is regarded as one of the best natural sources of anthocyanins and is widely explored for its health-beneficial compounds. Besides anthocyanins, one of the major attributes that determine the berry quality is the accumulation of sugars that provide sweetness and flavor to ripening fruit. In this study, we have identified 25 sugar metabolism-related genes in bilberry, including invertases (INVs), hexokinases (HKs), fructokinases (FKs), sucrose synthases (SSs), sucrose phosphate synthases (SPSs), and sucrose phosphate phosphatases (SPPs). The results indicate that isoforms of the identified genes are expressed differentially during berry development, suggesting specialized functions. The highest sugar content was found in ripe berries, with fructose and glucose dominating accompanied by low sucrose amount. The related enzyme activities during berry development and ripening were further analyzed to understand the molecular mechanism of sugar accumulation. The activity of INVs in the cell wall and vacuole increased toward ripe berries. Amylase activity involved in starch metabolism was not detected in unripe berries but was found in ripe berries. Sucrose resynthesizing SS enzyme activity was detected upon early ripening and had the highest activity in ripe berries. Interestingly, our transcriptome data showed that supplemental irradiation with red and blue light triggered upregulation of several sugar metabolism-related genes, including α- and β-amylases. Also, differential expression patterns in responses to red and blue light were found across sucrose, galactose, and sugar-alcohol metabolism. Our enzymological and transcriptional data provide new understanding of the bilberry fruit sugar metabolism having major effect on fruit quality.
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Affiliation(s)
- Amos Samkumar
- Department of Arctic and Marine BiologyUiT The Arctic University of NorwayTromsøNorway
| | - Katja Karppinen
- Department of Arctic and Marine BiologyUiT The Arctic University of NorwayTromsøNorway
| | - Binita Dhakal
- Department of Arctic and Marine BiologyUiT The Arctic University of NorwayTromsøNorway
| | - Inger Martinussen
- Division of Food Production and SocietyNorwegian Institute of Bioeconomy ResearchÅsNorway
| | - Laura Jaakola
- Department of Arctic and Marine BiologyUiT The Arctic University of NorwayTromsøNorway
- Division of Food Production and SocietyNorwegian Institute of Bioeconomy ResearchÅsNorway
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16
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Renai L, Ancillotti C, Ulaszewska M, Garcia-Aloy M, Mattivi F, Bartoletti R, Del Bubba M. Comparison of chemometric strategies for potential exposure marker discovery and false-positive reduction in untargeted metabolomics: application to the serum analysis by LC-HRMS after intake of Vaccinium fruit supplements. Anal Bioanal Chem 2022. [PMID: 35028688 DOI: 10.1007/s00216-021-03815-5] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/05/2021] [Revised: 11/18/2021] [Accepted: 11/30/2021] [Indexed: 11/01/2022]
Abstract
Untargeted liquid chromatographic-high-resolution mass spectrometric (LC-HRMS) metabolomics for potential exposure marker (PEM) discovery in nutrikinetic studies generates complex outputs. The correct selection of statistically significant PEMs is a crucial analytical step for understanding nutrition-health interactions. Hence, in this paper, different chemometric selection workflows for PEM discovery, using multivariate or univariate parametric or non-parametric data analyses, were comparatively tested and evaluated. The PEM selection protocols were applied to a small-sample-size untargeted LC-HRMS study of a longitudinal set of serum samples from 20 volunteers after a single intake of (poly)phenolic-rich Vaccinium myrtillus and Vaccinium corymbosum supplements. The non-parametric Games-Howell test identified a restricted group of significant features, thus minimizing the risk of false-positive retention. Among the forty-seven PEMs exhibiting a statistically significant postprandial kinetics, twelve were successfully annotated as purine pathway metabolites, benzoic and benzodiol metabolites, indole alkaloids, and organic and fatty acids, and five (i.e. octahydro-methyl-β-carboline-dicarboxylic acid, tetrahydro-methyl-β-carboline-dicarboxylic acid, citric acid, caprylic acid, and azelaic acid) were associated to Vaccinium berry consumption for the first time. The analysis of the area under the curve of the longitudinal dataset highlighted thirteen statistically significant PEMs discriminating the two interventions, including four intra-intervention relevant metabolites (i.e. abscisic acid glucuronide, catechol sulphate, methyl-catechol sulphate, and α-hydroxy-hippuric acid). Principal component analysis and sample classification through linear discriminant analysis performed on PEM maximum intensity confirmed the discriminating role of these PEMs.
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17
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Gupta K, Wani SH, Razzaq A, Skalicky M, Samantara K, Gupta S, Pandita D, Goel S, Grewal S, Hejnak V, Shiv A, El-Sabrout AM, Elansary HO, Alaklabi A, Brestic M. Abscisic Acid: Role in Fruit Development and Ripening. Front Plant Sci 2022; 13:817500. [PMID: 35620694 PMCID: PMC9127668 DOI: 10.3389/fpls.2022.817500] [Citation(s) in RCA: 17] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/18/2021] [Accepted: 03/07/2022] [Indexed: 05/10/2023]
Abstract
Abscisic acid (ABA) is a plant growth regulator known for its functions, especially in seed maturation, seed dormancy, adaptive responses to biotic and abiotic stresses, and leaf and bud abscission. ABA activity is governed by multiple regulatory pathways that control ABA biosynthesis, signal transduction, and transport. The transport of the ABA signaling molecule occurs from the shoot (site of synthesis) to the fruit (site of action), where ABA receptors decode information as fruit maturation begins and is significantly promoted. The maximum amount of ABA is exported by the phloem from developing fruits during seed formation and initiation of fruit expansion. In the later stages of fruit ripening, ABA export from the phloem decreases significantly, leading to an accumulation of ABA in ripening fruit. Fruit growth, ripening, and senescence are under the control of ABA, and the mechanisms governing these processes are still unfolding. During the fruit ripening phase, interactions between ABA and ethylene are found in both climacteric and non-climacteric fruits. It is clear that ABA regulates ethylene biosynthesis and signaling during fruit ripening, but the molecular mechanism controlling the interaction between ABA and ethylene has not yet been discovered. The effects of ABA and ethylene on fruit ripening are synergistic, and the interaction of ABA with other plant hormones is an essential determinant of fruit growth and ripening. Reaction and biosynthetic mechanisms, signal transduction, and recognition of ABA receptors in fruits need to be elucidated by a more thorough study to understand the role of ABA in fruit ripening. Genetic modifications of ABA signaling can be used in commercial applications to increase fruit yield and quality. This review discusses the mechanism of ABA biosynthesis, its translocation, and signaling pathways, as well as the recent findings on ABA function in fruit development and ripening.
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Affiliation(s)
- Kapil Gupta
- Department of Biotechnology, Siddharth University, Kapilvastu, India
| | - Shabir H. Wani
- Mountain Research Centre for Field Crops, Sher-e-Kashmir University of Agricultural Sciences and Technology of Jammu, Khudwani, India
- *Correspondence: Shabir H. Wani,
| | - Ali Razzaq
- Centre of Agricultural Biochemistry and Biotechnology, University of Agriculture, Faisalabad, Pakistan
| | - Milan Skalicky
- Department of Botany and Plant Physiology, Faculty of Agrobiology, Food, and Natural Resources, Czech University of Life Sciences Prague, Prague, Czechia
- Milan Skalicky,
| | - Kajal Samantara
- Department of Genetics and Plant Breeding, Centurion University of Technology and Management, Paralakhemundi, India
| | - Shubhra Gupta
- Department of Biotechnology, Deen Dayal Upadhyaya Gorakhpur University, Gorakhpur, India
| | - Deepu Pandita
- Government Department of School Education, Jammu, India
| | - Sonia Goel
- Faculty of Agricultural Sciences, SGT University, Haryana, India
| | - Sapna Grewal
- Bio and Nanotechnology Department, Guru Jambheshwar University of Science and Technology, Hisar, Haryana
| | - Vaclav Hejnak
- Department of Botany and Plant Physiology, Faculty of Agrobiology, Food, and Natural Resources, Czech University of Life Sciences Prague, Prague, Czechia
| | - Aalok Shiv
- Division of Crop Improvement, ICAR-Indian Institute of Sugarcane Research, Lucknow, India
| | - Ahmed M. El-Sabrout
- Department of Applied Entomology and Zoology, Faculty of Agriculture (EL-Shatby), Alexandria University, Alexandria, Egypt
| | - Hosam O. Elansary
- Plant Production Department, College of Food and Agricultural Sciences, King Saud University, Riyadh, Saudi Arabia
- Floriculture, Ornamental Horticulture, and Garden Design Department, Faculty of Agriculture (El-Shatby), Alexandria University, Alexandria, Egypt
| | - Abdullah Alaklabi
- Department of Biology, Faculty of Science, University of Bisha, Bisha, Saudi Arabia
| | - Marian Brestic
- Department of Botany and Plant Physiology, Faculty of Agrobiology, Food, and Natural Resources, Czech University of Life Sciences Prague, Prague, Czechia
- Institut of Plant and Environmental Sciences, Slovak University of Agriculture, Nitra, Slovakia
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18
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Samkumar A, Karppinen K, McGhie TK, Espley RV, Martinussen I, Jaakola L. Flavonoid biosynthesis is differentially altered in detached and attached ripening bilberries in response to spectral light quality. Front Plant Sci 2022; 13:969934. [PMID: 35937358 PMCID: PMC9355381 DOI: 10.3389/fpls.2022.969934] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/15/2022] [Accepted: 06/28/2022] [Indexed: 05/15/2023]
Abstract
Light spectral quality is known to affect flavonoid biosynthesis during fruit ripening. However, the response of fruits to different light conditions, when ripening autonomously from the parent plant (detached), has been less explored. In this study, we analyzed the effect of light quality on detached and naturally ripening (attached) non-climacteric wild bilberry (Vaccinium myrtillus L.) fruits accumulating high amounts of anthocyanins and flavonols. Our results indicated contrasting responses for the accumulation of phenolic compounds in the berries in response to red and blue light treatments. For detached berries, supplemental blue light resulted in the highest accumulation of anthocyanins, while naturally ripening berries had elevated accumulation under supplemental red light treatment. Both red and blue supplemental light increased the expression levels of all the major structural genes of the flavonoid pathway during ripening. Notably, the key regulatory gene of anthocyanin biosynthesis, VmMYBA1, was found to express fivefold higher under blue light treatment in the detached berries compared to the control. The red light treatment of naturally ripening berries selectively increased the delphinidin branch of anthocyanins, whereas in detached berries, blue light increased other anthocyanin classes along with delphinidins. In addition, red and far-red light had a positive influence on the accumulation of flavonols, especially quercetin and myricetin glycoside derivatives, in both ripening conditions. Our results of differential light effects on attached and detached berries, which lacks signaling from the mother plant, provide new insights in understanding the light-mediated regulatory mechanisms in non-climacteric fruit ripening.
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Affiliation(s)
- Amos Samkumar
- Department of Arctic and Marine Biology, UiT The Arctic University of Norway, Tromsø, Norway
- *Correspondence: Amos Samkumar,
| | - Katja Karppinen
- Department of Arctic and Marine Biology, UiT The Arctic University of Norway, Tromsø, Norway
| | - Tony K. McGhie
- The New Zealand Institute for Plant and Food Research Ltd., Palmerston North, New Zealand
| | - Richard V. Espley
- The New Zealand Institute for Plant and Food Research Ltd., Auckland, New Zealand
| | - Inger Martinussen
- Department of Horticulture, Norwegian Institute of Bioeconomy Research, Ås, Norway
| | - Laura Jaakola
- Department of Arctic and Marine Biology, UiT The Arctic University of Norway, Tromsø, Norway
- Department of Horticulture, Norwegian Institute of Bioeconomy Research, Ås, Norway
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19
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Karppinen K, Lafferty DJ, Albert NW, Mikkola N, McGhie T, Allan AC, Afzal BM, Häggman H, Espley RV, Jaakola L. MYBA and MYBPA transcription factors co-regulate anthocyanin biosynthesis in blue-coloured berries. New Phytol 2021; 232:1350-1367. [PMID: 34351627 DOI: 10.1111/nph.17669] [Citation(s) in RCA: 32] [Impact Index Per Article: 10.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/16/2021] [Accepted: 08/02/2021] [Indexed: 05/14/2023]
Abstract
The regulatory network of R2R3 MYB transcription factors in anthocyanin biosynthesis is not fully understood in blue-coloured berries containing delphinidin compounds. We used blue berries of bilberry (Vaccinium myrtillus) to comprehensively characterise flavonoid-regulating R2R3 MYBs, which revealed a new type of co-regulation in anthocyanin biosynthesis between members of MYBA-, MYBPA1- and MYBPA2-subgroups. VmMYBA1, VmMYBPA1.1 and VmMYBPA2.2 expression was elevated at berry ripening and by abscisic acid treatment. Additionally, VmMYBA1 and VmMYBPA1.1 expression was strongly downregulated in a white berry mutant. Complementation and transient overexpression assays confirmed VmMYBA1 and VmMYBA2 to induce anthocyanin accumulation. Promoter activation assays showed that VmMYBA1, VmMYBPA1.1 and VmMYBPA2.2 had similar activity towards dihydroflavonol 4-reductase (DFR) and anthocyanidin synthase (ANS), but differential regulation activity for UDP-glucose flavonoid 3-O-glucosyltransferase (UFGT) and flavonoid 3'5'-hydroxylase (F3'5'H) promoters. Silencing of VmMYBPA1.1 in berries led to the downregulation of key anthocyanin and delphinidin biosynthesis genes. Functional analyses of other MYBPA regulators, and a member of novel MYBPA3 subgroup, associated them with proanthocyanidin biosynthesis and F3'5'H expression. The existence of 18 flavonoid-regulating MYBs indicated gene duplication, which may have enabled functional diversification among MYBA, MYBPA1 and MYBPA2 subgroups. Our results provide new insights into the intricate regulation of the complex anthocyanin profile found in blue-coloured berries involving regulation of both cyanidin and delphinidin branches.
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Affiliation(s)
- Katja Karppinen
- Department of Arctic and Marine Biology, UiT The Arctic University of Norway, Tromsø, 9037, Norway
| | - Declan J Lafferty
- The New Zealand Institute for Plant and Food Research Ltd, Palmerston North, 4410, New Zealand
- School of Biological Sciences, University of Auckland, Auckland, 1142, New Zealand
| | - Nick W Albert
- The New Zealand Institute for Plant and Food Research Ltd, Palmerston North, 4410, New Zealand
| | - Nelli Mikkola
- Department of Ecology and Genetics, University of Oulu, Oulu, 90014, Finland
| | - Tony McGhie
- The New Zealand Institute for Plant and Food Research Ltd, Palmerston North, 4410, New Zealand
| | - Andrew C Allan
- School of Biological Sciences, University of Auckland, Auckland, 1142, New Zealand
- The New Zealand Institute for Plant and Food Research Ltd, Auckland, 1025, New Zealand
| | - Bilal M Afzal
- Department of Arctic and Marine Biology, UiT The Arctic University of Norway, Tromsø, 9037, Norway
| | - Hely Häggman
- Department of Ecology and Genetics, University of Oulu, Oulu, 90014, Finland
| | - Richard V Espley
- The New Zealand Institute for Plant and Food Research Ltd, Auckland, 1025, New Zealand
| | - Laura Jaakola
- Department of Arctic and Marine Biology, UiT The Arctic University of Norway, Tromsø, 9037, Norway
- Norwegian Institute of Bioeconomy Research (NIBIO), Ås, 1431, Norway
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20
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Zhao X, Zhang X, Liu J, Li D, Tao Y, Tian Y, Li P, Sun S, Liu D. Identification of key enzymes involved in the accumulation of carotenoids during fruit ripening of
Lycium barbarum
L. by a proteomic approach. Int J Food Sci Technol 2021. [DOI: 10.1111/ijfs.15279] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Xiaolu Zhao
- School of Food & Wine Ningxia University Yinchuan 750021 China
| | - Xikang Zhang
- School of Agriculture Ningxia University Yinchuan 750021 China
| | - Jun Liu
- School of Agriculture Ningxia University Yinchuan 750021 China
| | - Dongdong Li
- School of Agriculture Ningxia University Yinchuan 750021 China
| | - Yingmei Tao
- School of Agriculture Ningxia University Yinchuan 750021 China
| | - Yutan Tian
- School of Food & Wine Ningxia University Yinchuan 750021 China
| | - Peipei Li
- School of Food & Wine Ningxia University Yinchuan 750021 China
| | - Shaoyi Sun
- School of Food & Wine Ningxia University Yinchuan 750021 China
| | - Dunhua Liu
- School of Food & Wine Ningxia University Yinchuan 750021 China
- School of Agriculture Ningxia University Yinchuan 750021 China
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21
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Samkumar A, Jones D, Karppinen K, Dare AP, Sipari N, Espley RV, Martinussen I, Jaakola L. Red and blue light treatments of ripening bilberry fruits reveal differences in signalling through abscisic acid-regulated anthocyanin biosynthesis. Plant Cell Environ 2021; 44:3227-3245. [PMID: 34337774 DOI: 10.1111/pce.14158] [Citation(s) in RCA: 25] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/24/2021] [Revised: 07/19/2021] [Accepted: 07/19/2021] [Indexed: 05/28/2023]
Abstract
The biosynthesis of anthocyanins has been shown to be influenced by light quality. However, the molecular mechanisms underlying the light-mediated regulation of fruit anthocyanin biosynthesis are not well understood. In this study, we analysed the effects of supplemental red and blue light on the anthocyanin biosynthesis in non-climacteric bilberry (Vaccinium myrtillus L.). After 6 days of continuous irradiation during ripening, both red and blue light elevated concentration of anthocyanins, up to 12- and 4-folds, respectively, compared to the control. Transcriptomic analysis of ripening berries showed that both light treatments up-regulated all the major anthocyanin structural genes, the key regulatory MYB transcription factors and abscisic acid (ABA) biosynthetic genes. However, higher induction of specific genes of anthocyanin and delphinidin biosynthesis alongside ABA signal perception and metabolism were found in red light. The difference in red and blue light signalling was found in 9-cis-epoxycarotenoid dioxygenase (NCED), ABA receptor pyrabactin resistance-like (PYL) and catabolic ABA-8'hydroxylase gene expression. Red light also up-regulated expression of soluble N-ethylmaleimide-sensitive factor attachment protein receptor (SNARE) domain transporters, which may indicate involvement of these proteins in vesicular trafficking of anthocyanins during fruit ripening. Our results suggest differential signal transduction and transport mechanisms between red and blue light in ABA-regulated anthocyanin and delphinidin biosynthesis during bilberry fruit ripening.
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Affiliation(s)
- Amos Samkumar
- Department of Arctic and Marine Biology, UiT The Arctic University of Norway, Tromsø, Norway
| | - Dan Jones
- The New Zealand Institute for Plant and Food Research Ltd., Auckland, New Zealand
| | - Katja Karppinen
- Department of Arctic and Marine Biology, UiT The Arctic University of Norway, Tromsø, Norway
| | - Andrew P Dare
- The New Zealand Institute for Plant and Food Research Ltd., Auckland, New Zealand
| | - Nina Sipari
- Viikki Metabolomics Unit, Organismal and Evolutionary Biology Research Programme, University of Helsinki, Helsinki, Finland
| | - Richard V Espley
- The New Zealand Institute for Plant and Food Research Ltd., Auckland, New Zealand
| | | | - Laura Jaakola
- Department of Arctic and Marine Biology, UiT The Arctic University of Norway, Tromsø, Norway
- Norwegian Institute of Bioeconomy Research, Ås, Norway
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Neamtu AA, Szoke-Kovacs R, Mihok E, Georgescu C, Turcus V, Olah NK, Frum A, Tita O, Neamtu C, Szoke-Kovacs Z, Cziaky Z, Mathe E. Bilberry ( Vaccinium myrtillus L.) Extracts Comparative Analysis Regarding Their Phytonutrient Profiles, Antioxidant Capacity along with the In Vivo Rescue Effects Tested on a Drosophila melanogaster High-Sugar Diet Model. Antioxidants (Basel) 2020; 9:E1067. [PMID: 33143302 PMCID: PMC7694118 DOI: 10.3390/antiox9111067] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2020] [Revised: 10/23/2020] [Accepted: 10/26/2020] [Indexed: 12/26/2022] Open
Abstract
Bilberries (Vaccinium myrtillus L.) have been reported to hold a plentitude of health-promoting properties beyond basic nutrition, mainly attributed to their anthocyanin content and antioxidant activity. In this article, we built the phytochemical profile of three wild bilberry fruit extract formulations (aqueous, methanolic, and hydro-methanolic) using UHPLC-ESI-MS/MS putative analysis, identifying 88 individual phytochemicals, mainly flavonoids (total content 8.41 ± 0.11 mg QE/g dw), free amino acids, polyphenols (total content 21.68 ± 0.19 mg GAE/g dw), carboxylic acids, and vitamins. Furthermore, the antioxidant activity of the extract was assessed, reaching 78.03 ± 0.16% DPPH free radical scavenging activity, comparable to literature values determined for bilberry extracts of other origin. Due to the increased prevalence of metabolic syndrome and based on the reviewed benefits of bilberries, we tested the most potent formulation of our bilberry extracts in this biological context. The in vivo rescue effect of a bilberry extract supplemented diet on Drosophila melanogaster was assessed by monitoring biochemical and genomic markers. Hemolymph trehalose levels were halved upon addition of 3% hydro-methanolic bilberry extract to a high-sugar (1.5 M sucrose) diet, as compared to the non-supplemented high-sugar diet. Noteworthy, the rescue seen for flies kept on the bilberry extract supplemented high-sugar diet appeared to parallel the trehalose levels observed in the case of the control diet (50 mM sucrose) flies. Moreover, next to the trehalose-lowering type of in vivo effects, other gene expression related rescues were also detected for genes such as InR, Akh, AstA, AstC, Irk, Npc2g, and CCHa2 upon supplementation of the high-sugar diet with our hydro-methanolic bilberry fruit extract. Our findings suggest that such a bilberry fruit extract could generate physiological and genomic type of compensatory mechanisms so that further translational approaches would advance the understanding of some human specific pathological conditions.
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Affiliation(s)
| | - Rita Szoke-Kovacs
- Doctoral School of Molecular Cell Biology and Immunology, Faculty of Medicine, University of Debrecen, H-4032 Debrecen, Hungary;
| | - Emoke Mihok
- Doctoral School of Animal Science, Faculty of Agricultural and Food Sciences and Environmental Management, University of Debrecen, H-4032 Debrecen, Hungary;
| | - Cecilia Georgescu
- Faculty of Agricultural Science, Food Industry and Environmental Protection, “Lucian Blaga” University of Sibiu, 550012 Sibiu, Romania; (A.F.); (O.T.)
| | - Violeta Turcus
- Faculty of Medicine, “Vasile Goldis” Western University of Arad, 310045 Arad, Romania; (V.T.); (C.N.)
| | - Neli Kinga Olah
- Faculty of Pharmacy, “Vasile Goldis” Western University of Arad, 310045 Arad, Romania;
| | - Adina Frum
- Faculty of Agricultural Science, Food Industry and Environmental Protection, “Lucian Blaga” University of Sibiu, 550012 Sibiu, Romania; (A.F.); (O.T.)
| | - Ovidiu Tita
- Faculty of Agricultural Science, Food Industry and Environmental Protection, “Lucian Blaga” University of Sibiu, 550012 Sibiu, Romania; (A.F.); (O.T.)
| | - Carmen Neamtu
- Faculty of Medicine, “Vasile Goldis” Western University of Arad, 310045 Arad, Romania; (V.T.); (C.N.)
| | - Zsombor Szoke-Kovacs
- Doctoral School of Nutrition, Faculty of Agricultural and Food Sciences and Environmental Management, University of Debrecen, H-4032 Debrecen, Hungary;
| | - Zoltan Cziaky
- Agricultural and Molecular Research and Service Institute, University of Nyiregyhaza, H-4400 Nyíregyháza, Hungary;
| | - Endre Mathe
- Faculty of Medicine, “Vasile Goldis” Western University of Arad, 310045 Arad, Romania; (V.T.); (C.N.)
- Faculty of Agricultural and Food Sciences and Environmental Management, University of Debrecen, H-4032 Debrecen, Hungary
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Li X, Hou Y, Xie X, Li H, Li X, Zhu Y, Zhai L, Zhang C, Bian S. A blueberry MIR156a-SPL12 module coordinates the accumulation of chlorophylls and anthocyanins during fruit ripening. J Exp Bot 2020; 71:5976-5989. [PMID: 32686829 DOI: 10.1093/jxb/eraa327] [Citation(s) in RCA: 29] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/25/2020] [Accepted: 07/14/2020] [Indexed: 05/24/2023]
Abstract
Color change is an important event during fruit maturation in blueberry, usually depending on chlorophyll degradation and anthocyanin accumulation. MicroRNA156 (miR156)-SPL modules are an important group of regulatory hubs involved in the regulation of anthocyanin biosynthesis. However, little is known regarding their roles in blueberry or in chlorophyll metabolism during color change. In this study, a MIR156 gene (VcMIR156a) was experimentally identified in blueberry (Vaccinium corymbosum). Overexpression of VcMIR156a in tomato (Solanum lycopersicum) enhanced anthocyanin biosynthesis and chlorophyll degradation in the stem by altering pigment-associated gene expression. Further investigation indicated that the VcSPL12 transcript could be targeted by miR156, and showed the reverse accumulation patterns during blueberry fruit development and maturation. Noticeably, VcSPL12 was highly expressed at green fruit stages, while VcMIR156a transcripts mainly accumulated at the white fruit stage when expression of VcSPL12 was dramatically decreased, implying that VcMIR156a-VcSPL12 is a key regulatory hub during fruit coloration. Moreover, VcSPL12 decreased the expression of several anthocyanin biosynthetic and regulatory genes, and a yeast two-hybrid assay indicated that VcSPL12 interacted with VcMYBPA1. Intriguingly, expression of VcSPL12 significantly enhanced chlorophyll accumulation and altered the expression of several chlorophyll-associated genes. Additionally, the chloroplast ultrastructure was altered by the expression of VcMIR156a and VcSPL12. These findings provide a novel insight into the functional roles of miR156-SPLs in plants, especially in blueberry fruit coloration.
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Affiliation(s)
- Xuyan Li
- College of Plant Science, Jilin University, Changchun, Jilin, China
| | - Yanming Hou
- College of Plant Science, Jilin University, Changchun, Jilin, China
| | - Xin Xie
- College of Plant Science, Jilin University, Changchun, Jilin, China
| | - Hongxue Li
- College of Plant Science, Jilin University, Changchun, Jilin, China
| | - Xiaodong Li
- Institute of Botany, the Chinese Academy of Sciences, Beijing, China
| | - Yan Zhu
- Institute of Botany, the Chinese Academy of Sciences, Beijing, China
| | - Lulu Zhai
- College of Plant Science, Jilin University, Changchun, Jilin, China
| | - Chunyu Zhang
- College of Plant Science, Jilin University, Changchun, Jilin, China
| | - Shaomin Bian
- College of Plant Science, Jilin University, Changchun, Jilin, China
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Suvanto J, Karppinen K, Riihinen K, Jaakola L, Salminen JP. Changes in the Proanthocyanidin Composition and Related Gene Expression in Bilberry ( Vaccinium myrtillus L.) Tissues. J Agric Food Chem 2020; 68:7378-7386. [PMID: 32543188 PMCID: PMC7467716 DOI: 10.1021/acs.jafc.0c02158] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/17/2023]
Abstract
Berries of genus Vaccinium are rich in flavonoids and proanthocyanidins (PAs). We studied the PA composition and biosynthesis in bilberry (Vaccinium myrtillus L.) tissues and during fruit development. Soluble PAs, analyzed by UHPLC-MS/MS, were most abundant in stem and rhizome with the mean PA polymerization level varying between 4 and 6 in all tissues. Both A- and B-type PAs were present in all tissues. Procyanidin subunits were more common than prodelphinidin subunits in PAs. During fruit ripening, the amount of procyanidin subunits decreased while prodelphinidin subunits and F3'5'H expression increased, indicating a shift in biosynthesis toward the delphinidin branch of the flavonoid pathway. Epicatechin was the most abundant flavan-3-ol in all tissues. Expression of ANR and three isolated LAR genes, analyzed by qRT-PCR, showed connection to accumulation of PAs and flavan-3-ols biosynthesized from different flavonoid branches. Insoluble PAs accumulated during berry development, suggesting that PAs are not recycled after biosynthesis.
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Affiliation(s)
- Jussi Suvanto
- Natural Chemistry Research Group, Department of Chemistry, University of Turku, FI-20014 Turku, Finland
| | - Katja Karppinen
- Department of Arctic and Marine Biology, UiT the Arctic University of Norway, NO-9037 Tromsø, Norway
| | - Kaisu Riihinen
- Institute of Public Health and Clinical Nutrition, University of Eastern Finland, FI-70211 Kuopio, Finland
| | - Laura Jaakola
- Department of Arctic and Marine Biology, UiT the Arctic University of Norway, NO-9037 Tromsø, Norway
- Norwegian Institute of Bioeconomy Research (NIBIO), NO-1431 Ås, Norway
| | - Juha-Pekka Salminen
- Natural Chemistry Research Group, Department of Chemistry, University of Turku, FI-20014 Turku, Finland
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Liu Y, Dong B, Zhang C, Yang L, Wang Y, Zhao H. Effects of Exogenous Abscisic Acid (ABA) on Carotenoids and Petal Color in Osmanthus fragrans 'Yanhonggui'. Plants (Basel) 2020; 9:E454. [PMID: 32260328 DOI: 10.3390/plants9040454] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/17/2020] [Revised: 03/17/2020] [Accepted: 03/31/2020] [Indexed: 01/16/2023]
Abstract
Osmanthus fragrans is a well-known native plant in China, and carotenoids are the main group of pigments in the petals. Abscisic acid (ABA) is one of the products of the metabolic pathway of carotenoids. Application of ABA could affect pigmentation of flower petals by changing the carotenoid content. However, little is known about the effects of ABA treatment on carotenoid accumulation in O. fragrans. In this study, different concentrations of ABA (0, 150 and 200 mg/L) were spread on the petals of O. fragrans 'Yanhonggui'. The petal color of 'Yanhonggui' receiving every ABA treatment was deeper than that of the control. The content of total carotenoids in the petals significantly increased with 200 mg/L ABA treatment. In the petals, α-carotene and β-carotene were the predominant carotenoids. The expression of several genes involved in the metabolism of carotenoids increased with 200 mg/L ABA treatment, including PSY1, PDS1, Z-ISO1, ZDS1, CRTISO, NCED3 and CCD4. However, the transcription levels of the latter two carotenoid degradation-related genes were much lower than of the five former carotenoid biosynthesis-related genes; the finding would explain the significant increase in total carotenoids in 'Yanhonggui' petals receiving the 200 mg/L ABA treatment.
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Gan Z, Shan N, Fei L, Wan C, Chen J. Isolation of the 9-cis-epoxycarotenoid dioxygenase (NCED) gene from kiwifruit and its effects on postharvest softening and ripening. Scientia Horticulturae 2020. [DOI: 10.1016/j.scienta.2019.109020] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
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Kim J, Lee JG, Hong Y, Lee EJ. Analysis of eight phytohormone concentrations, expression levels of ABA biosynthesis genes, and ripening-related transcription factors during fruit development in strawberry. J Plant Physiol 2019; 239:52-60. [PMID: 31185317 DOI: 10.1016/j.jplph.2019.05.013] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/02/2018] [Revised: 05/26/2019] [Accepted: 05/29/2019] [Indexed: 05/25/2023]
Abstract
The contents of eight phytohormones and the expression levels of genes encoding enzymes related to abscisic acid (ABA) biosynthesis and deactivation/degradation and transcription factors (TFs) related to fruit ripening were studied in the non-climacteric strawberry fruit (Fragaria × ananassa Duch., cv. 'Seolhyang') at six developmental stages. The hormones tested were ABA, indole-3-acetic acid (IAA), gibberellic acid 4 (GA4), jasmonic acid (JA), methyljasmonate (MJ), jasmonoyl isoleucine (JA-Ile), salicylic acid (SA), and ethylene (ET). The developmental and ripening stages studied were small green (S1, 11 days post-anthesis, DPA), green (S2, 20 DPA), breaker (S3, 24 DPA), pink (S4, 27 DPA), red (S5, 31 DPA), and fully red (S6, 40 DPA). IAA and GA4 contents were highest at S1 and gradually decreased after this stage. ABA content was low at S1-S3 and then increased rapidly until peaking at S6. By contrast, MJ content showed no significant changes over time, while SA content gradually increased. JA, JA-Ile, and ET contents were either insufficient for quantification or undetectable. Expression of the ABA biosynthesis genes FaNCED1 and FaABA2 increased during fruit ripening, whereas expression of the ABA deactivation/degradation genes FaUGT75C1 and FaCYP707A1 was high early in development, when ABA content was low, and then decreased. Among four ripening-related TF genes, FaMYB1, FaMYB5, FaMYB10, and FaASR, only the expression of FaMYB10 seemed to be closely related to strawberry fruit ripening. Our study supports the idea that ABA and FaMYB10 appear to be the key hormone and TF regulating strawberry ripening.
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Affiliation(s)
- Joonggon Kim
- Department of Plant Science, Research Institute of Agriculture and Life Sciences, Seoul National University, Seoul 08826, Republic of Korea
| | - Jeong Gu Lee
- Department of Plant Science, Research Institute of Agriculture and Life Sciences, Seoul National University, Seoul 08826, Republic of Korea
| | - Yoonpyo Hong
- National Institute of Horticultural and Herbal Science, Rural Development Administration, 55365 Wanju-gun, Republic of Korea
| | - Eun Jin Lee
- Department of Plant Science, Research Institute of Agriculture and Life Sciences, Seoul National University, Seoul 08826, Republic of Korea.
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28
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Chung SW, Yu DJ, Oh HD, Ahn JH, Huh JH, Lee HJ. Transcriptional regulation of abscisic acid biosynthesis and signal transduction, and anthocyanin biosynthesis in 'Bluecrop' highbush blueberry fruit during ripening. PLoS One 2019; 14:e0220015. [PMID: 31318958 DOI: 10.1371/journal.pone.0220015] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2019] [Accepted: 07/05/2019] [Indexed: 11/19/2022] Open
Abstract
Highbush blueberry (Vaccinium corymbosum) fruit accumulate high levels of anthocyanins during ripening, which might be controlled by abscisic acid (ABA), a signal molecule in non-climacteric fruits. For an integrated view of the ripening process from ABA to anthocyanin biosynthesis, we analyzed the transcriptomes of ‘Bluecrop’ highbush blueberry fruit using RNA-Seq at three ripening stages, categorized based on fruit skin coloration: pale green at ca. 30 days after full bloom (DAFB), reddish purple at ca. 40 DAFB, and dark purple at ca. 50 DAFB. Mapping the trimmed reads against the reference sequences yielded 25,766 transcripts. Of these, 143 transcripts were annotated to encode five ABA biosynthesis enzymes, four ABA signal transduction regulators, four ABA-responsive transcription factors, and 12 anthocyanin biosynthesis enzymes. The analysis of differentially expressed genes between the ripening stages revealed that 11 transcripts, including those encoding nine-cis-epoxycarotenoid dioxygenase, SQUAMOSA-class MADS box transcription factor, and flavonoid 3′,5′-hydroxylase, were significantly up-regulated throughout the entire ripening stages. In fruit treated with 1 g L−1 ABA, at least nine transcripts of these 11 transcripts as well as one transcript encoding flavonoid 3′-hydroxylase were up-regulated, presumably promoting anthocyanin accumulation and fruit skin coloration. These results will provide fundamental information demonstrating that ABA biosynthesis and signal transduction, and anthocyanin biosynthesis are closely associated with anthocyanin accumulation and skin coloration in highbush blueberry fruit during ripening.
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Zhang Z, Kang C, Zhang S, Li X. Transcript analyses reveal a comprehensive role of abscisic acid in modulating fruit ripening in Chinese jujube. BMC Plant Biol 2019; 19:189. [PMID: 31068143 PMCID: PMC6505321 DOI: 10.1186/s12870-019-1802-2] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/10/2019] [Accepted: 04/26/2019] [Indexed: 05/18/2023]
Abstract
BACKGROUND Chinese jujube (Ziziphus jujuba Mill.) is a non-climacteric fruit; however, the underlying mechanism of ripening and the role of abscisic acid involved in this process are not yet understood for this species. RESULTS In the present study, a positive correlation between dynamic changes in endogenous ABA and the onset of jujube ripening was determined. Transcript analyses suggested that the expression balance among genes encoding nine-cis-epoxycarotenoid dioxygenase (ZjNCED3), ABA-8'-hydroxylase (ZjCYP707A2), and beta-glucosidase (ZjBG4, ZjBG5, ZjBG8, and ZjBG9) has an important role in maintaining ABA accumulation, while the expression of a receptor (ZjPYL8), protein phosphatase 2C (ZjPP2C4-8), and sucrose nonfermenting 1-related protein kinase 2 (ZjSnRK2-2 and ZjSnRK2-5) is important in regulating fruit sensitivity to ABA applications. In addition, white mature 'Dongzao' fruit were harvested and treated with 50 mg L- 1 ABA or 50 mg L- 1 nordihydroguaiaretic acid (NDGA) to explore the role of ABA in jujube fruit ripening. By comparative transcriptome analyses, 1103 and 505 genes were differentially expressed in response to ABA and NDGA applications on the 1st day after treatment, respectively. These DEGs were associated with photosynthesis, secondary, lipid, cell wall, and starch and sugar metabolic processes, suggesting the involvement of ABA in modulating jujube fruit ripening. Moreover, ABA also exhibited crosstalk with other phytohormones and transcription factors, indicating a regulatory network for jujube fruit ripening. CONCLUSIONS Our study further elucidated ABA-associated metabolic and regulatory processes. These findings are helpful for improving strategies for jujube fruit storage and for gaining insights into understand complex non-climacteric fruit ripening processes.
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Affiliation(s)
- Zhong Zhang
- College of Forestry, Northwest A&F University, Yangling, 712100 Shaanxi China
- Key Comprehensive Laboratory of Forestry of Shaanxi Province, Northwest A&F University, Yangling, 712100 Shaanxi China
| | - Chenxuan Kang
- College of Forestry, Northwest A&F University, Yangling, 712100 Shaanxi China
| | - Shuyi Zhang
- College of Forestry, Northwest A&F University, Yangling, 712100 Shaanxi China
- Forestry Administration of Linwei District, Weinan, 714000 Shaanxi China
| | - Xingang Li
- College of Forestry, Northwest A&F University, Yangling, 712100 Shaanxi China
- Key Comprehensive Laboratory of Forestry of Shaanxi Province, Northwest A&F University, Yangling, 712100 Shaanxi China
- Research Centre for Jujube Engineering and Technology of State Forestry and Grassland Administration, Northwest A&F University, Yangling, 712100 Shaanxi China
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Wang Y, Malladi A, Doyle J, Scherm H, Nambeesan S. The Effect of Ethephon, Abscisic Acid, and Methyl Jasmonate on Fruit Ripening in Rabbiteye Blueberry (Vaccinium virgatum). Horticulturae 2018; 4:24. [DOI: 10.3390/horticulturae4030024] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
Ripening in blueberry fruit is irregular and occurs over an extended period requiring multiple harvests, thereby increasing the cost of production. Several phytohormones contribute to the regulation of fruit ripening. Certain plant growth regulators (PGRs) can alter the content, perception, or action of these phytohormones, potentially accelerating fruit ripening and concentrating the ripening period. The effects of three such PGRs—ethephon, abscisic acid, and methyl jasmonate—on fruit ripening were evaluated in the rabbiteye blueberry (Vaccinium virgatum) cultivars ‘Premier’ and ‘Powderblue’. Application of ethephon, an ethylene-releasing PGR, at 250 mg L−1 when 30–40% of fruit on the plant were ripe, accelerated ripening by increasing the proportion of blue (ripe) fruit by 1.5–1.8-fold within 4 to 7 days after treatment in both cultivars. Ethephon applications did not generally alter fruit quality characteristics at harvest or during postharvest storage, except for a slight decrease in juice pH at 1 day of postharvest storage and an increase in fruit firmness and titratable acidity after 15 days of postharvest storage in Powderblue. In Premier, ethephon applications decreased the proportion of defective fruit at 29 days of postharvest storage. Abscisic acid (600–1000 mg L−1) and methyl jasmonate (0.5–1 mM) applications did not alter the proportion of ripe fruit in either cultivar. These applications also had little effect on fruit quality characteristics at harvest and during postharvest storage. None of the above PGR applications affected the development of naturally occurring postharvest pathogens during storage. Together, data from this study indicated that ethephon has the potential to accelerate ripening in rabbiteye blueberry fruit, allowing for a potential decrease in the number of fruit harvests.
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Nguyen N, Suokas M, Karppinen K, Vuosku J, Jaakola L, Häggman H. Recognition of candidate transcription factors related to bilberry fruit ripening by de novo transcriptome and qRT-PCR analyses. Sci Rep 2018; 8:9943. [PMID: 29967355 DOI: 10.1038/s41598-018-28158-7] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2017] [Accepted: 06/18/2018] [Indexed: 12/26/2022] Open
Abstract
Bilberry (Vaccinium myrtillus L.) fruits are an excellent natural resource for human diet because of their special flavor, taste and nutritional value as well as medical properties. Bilberries are recognized for their high anthocyanin content and many of the genes involved in the anthocyanin biosynthesis have been characterized. So far, neither genomic nor RNA-seq data have been available for the species. In the present study, we de novo sequenced two bilberry fruit developmental stages, unripe green (G) and ripening (R). A total of 57,919 unigenes were assembled of which 80.2% were annotated against six public protein databases. The transcriptome served as exploratory data to identify putative transcription factors related to fruit ripening. Differentially expressed genes (DEGs) between G and R stages were prominently upregulated in R stage with the functional annotation indicating their main roles in active metabolism and catalysis. The unigenes encoding putative ripening-related regulatory genes, including members of NAC, WRKY, LOB, ERF, ARF and ABI families, were analysed by qRT-PCR at five bilberry developmental stages. Our de novo transcriptome database contributes to the understanding of the regulatory network associated with the fruit ripening in bilberry and provides the first dataset for wild Vaccinium species acquired by NGS technology.
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Gao Z, Li Q, Li J, Chen Y, Luo M, Li H, Wang J, Wu Y, Duan S, Wang L, Song S, Xu W, Zhang C, Wang S, Ma C. Characterization of the ABA Receptor VlPYL1 That Regulates Anthocyanin Accumulation in Grape Berry Skin. Front Plant Sci 2018; 9:592. [PMID: 29868057 PMCID: PMC5968127 DOI: 10.3389/fpls.2018.00592] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/01/2017] [Accepted: 04/16/2018] [Indexed: 05/09/2023]
Abstract
ABA plays a crucial role in controlling several ripening-associated processes in grape berries. The soluble proteins named as PYR (pyrabactin resistant)/PYL (PYR-like)/RCAR (regulatory component of ABA receptor) family have been characterized as ABA receptors. Here, the function of a grape PYL1 encoding gene involved in the response to ABA was verified through heterologous expression. The expression level of VlPYL1 was highest in grape leaf and fruit tissues of the cultivar Kyoho, and the expression of VlPYL1 was increased during fruit development and showed a reduction in ripe berries. Over-expression of VlPYL1 enhances ABA sensitivity in Arabidopsis. Using the transient overexpression technique, the VlPYL1 gene was over-expressed in grape berries. Up-regulation of the VlPYL1 gene not only promoted anthocyanin accumulation but also induced a set of ABA-responsive gene transcripts, including ABF2 and BG3. Although tobacco rattle virus (TRV)-induced gene silencing (VIGS) was not successfully applied in the "Kyoho" grape, the application of the transient overexpression technique in grape fruit could be used as a novel tool for studying grape fruit development.
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Affiliation(s)
- Zhen Gao
- Department of Plant Science, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, China
| | - Qin Li
- Department of Plant Science, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, China
| | - Jing Li
- Department of Plant Science, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, China
| | - Yujin Chen
- Department of Plant Science, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, China
| | - Meng Luo
- Department of Plant Science, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, China
| | - Hui Li
- Department of Plant Science, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, China
| | - Jiyuan Wang
- Department of Plant Science, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, China
| | - Yusen Wu
- Department of Plant Science, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, China
| | - Shuyan Duan
- Department of Plant Science, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, China
| | - Lei Wang
- Department of Plant Science, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, China
| | - Shiren Song
- Department of Plant Science, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, China
| | - Wenping Xu
- Department of Plant Science, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, China
| | - Caixi Zhang
- Department of Plant Science, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, China
| | - Shiping Wang
- Department of Plant Science, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, China
- Institute of Agro-Food Science and Technology, Key Laboratory of Agro-Products Processing Technology of Shandong, Shandong Academy of Agricultural Sciences, Jinan, China
| | - Chao Ma
- Department of Plant Science, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, China
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González-Villagra J, Rodrigues-Salvador A, Nunes-Nesi A, Cohen JD, Reyes-Díaz MM. Age-related mechanism and its relationship with secondary metabolism and abscisic acid in Aristotelia chilensis plants subjected to drought stress. Plant Physiol Biochem 2018; 124:136-145. [PMID: 29360623 DOI: 10.1016/j.plaphy.2018.01.010] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/13/2017] [Revised: 01/08/2018] [Accepted: 01/11/2018] [Indexed: 05/01/2023]
Abstract
Drought stress is the most important stress factor for plants, being the main cause of agricultural crop loss in the world. Plants have developed complex mechanisms for preventing water loss and oxidative stress such as synthesis of abscisic acid (ABA) and non-enzymatic antioxidant compounds such as anthocyanins, which might help plants to cope with abiotic stress as antioxidants and for scavenging reactive oxygen species. A. chilensis (Mol.) is a pioneer species, colonizing and growing on stressed and disturbed environments. In this research, an integrated analysis of secondary metabolism in Aristotelia chilensis was done to relate ABA effects on anthocyanins biosynthesis, by comparing between young and fully-expanded leaves under drought stress. Plants were subjected to drought stress for 20 days, and physiological, biochemical, and molecular analyses were performed. The relative growth rate and plant water status were reduced in stressed plants, with young leaves significantly more affected than fully-expanded leaves beginning from the 5th day of drought stress. A. chilensis plants increased their ABA and total anthocyanin content and showed upregulation of gene expression when they were subjected to severe drought (day 20), with these effects being higher in fully-expanded leaves. Multivariate analysis indicated a significant positive correlation between transcript levels for NCED1 (9-cis-epoxycarotenoid dioxygenase) and UFGT (UDP glucose: flavonoid-3-O-glucosyltransferase) with ABA and total anthocyanin, respectively. Thus, this research provides a more comprehensive analysis of the mechanisms that allow plants to cope with drought stress. This is highlighted by the differences between young and fully-expanded leaves, showing different sensibility to stress due to their ability to synthesize anthocyanins. In addition, this ability to synthesize different and high amounts of anthocyanins could be related to higher NCED1 and MYB expression and ABA levels, enhancing drought stress tolerance.
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Affiliation(s)
- Jorge González-Villagra
- Doctoral Program in Science of Natural Resources, Universidad de La Frontera, P.O. Box 54-D, Temuco, Chile
| | - Acácio Rodrigues-Salvador
- Departamento de Biologia Vegetal, Universidade Federal de Viçosa, 36570-900, Viçosa, Minas Gerais, Brazil
| | - Adriano Nunes-Nesi
- Departamento de Biologia Vegetal, Universidade Federal de Viçosa, 36570-900, Viçosa, Minas Gerais, Brazil
| | - Jerry D Cohen
- Department of Horticultural Science and Microbial and Plant Genomics Institute, University of Minnesota, St. Paul, MN 55108, USA
| | - Marjorie M Reyes-Díaz
- Departamento de Ciencias Químicas y Recursos Naturales, Facultad de Ingeniería y Ciencias, Universidad de La Frontera, P.O. Box 54-D, Temuco, Chile; Center of Plant, Soil Interaction and Natural Resources Biotechnology, Scientific and Technological Bioresource Nucleus (BIOREN), Universidad de La Frontera, P.O. Box 54-D, Temuco, Chile.
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Karppinen K, Tegelberg P, Häggman H, Jaakola L. Abscisic Acid Regulates Anthocyanin Biosynthesis and Gene Expression Associated With Cell Wall Modification in Ripening Bilberry ( Vaccinium myrtillus L.) Fruits. Front Plant Sci 2018; 9:1259. [PMID: 30210522 PMCID: PMC6124387 DOI: 10.3389/fpls.2018.01259] [Citation(s) in RCA: 45] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/09/2018] [Accepted: 08/09/2018] [Indexed: 05/18/2023]
Abstract
Ripening of non-climacteric bilberry (Vaccinium myrtillus L.) fruit is characterized by a high accumulation of health-beneficial anthocyanins. Plant hormone abscisic acid (ABA) and sucrose have been shown to be among the central signaling molecules coordinating non-climacteric fruit ripening and anthocyanin accumulation in some fruits such as strawberry. Our earlier studies have demonstrated an elevation in endogenous ABA level in bilberry fruit at the onset of ripening indicating a role for ABA in the regulation of bilberry fruit ripening. In the present study, we show that the treatment of unripe green bilberry fruits with exogenous ABA significantly promotes anthocyanin biosynthesis and accumulation both in fruits attached and detached to the plant. In addition, ABA biosynthesis inhibitor, fluridone, delayed anthocyanin accumulation in bilberries. Exogenous ABA also induced the expression of several genes involved in cell wall modification in ripening bilberry fruits. Furthermore, silencing of VmNCED1, the key gene in ABA biosynthesis, was accompanied by the down-regulation in the expression of key anthocyanin biosynthetic genes. In contrast, the treatment of unripe green bilberry fruits with exogenous sucrose or glucose did not lead to an enhancement in the anthocyanin accumulation neither in fruits attached to plant nor in post-harvest fruits. Moreover, sugars failed to induce the expression of genes associated in anthocyanin biosynthesis or ABA biosynthesis while could elevate expression of some genes associated with cell wall modification in post-harvest bilberry fruits. Our results demonstrate that ABA plays a major role in the regulation of ripening-related processes such as anthocyanin biosynthesis and cell wall modification in bilberry fruit, whereas sugars seem to have minor regulatory roles in the processes. The results indicate that the regulation of bilberry fruit ripening differs from strawberry that is currently considered as a model of non-climacteric fruit ripening. In this study, we also identified transcription factors, which expression was enhanced by ABA, as potential regulators of ABA-mediated bilberry fruit ripening processes.
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Affiliation(s)
- Katja Karppinen
- Department of Ecology and Genetics, University of Oulu, Oulu, Finland
- Climate laboratory Holt, Department of Arctic and Marine Biology, UiT The Arctic University of Norway, Tromsø, Norway
| | - Pinja Tegelberg
- Department of Ecology and Genetics, University of Oulu, Oulu, Finland
| | - Hely Häggman
- Department of Ecology and Genetics, University of Oulu, Oulu, Finland
| | - Laura Jaakola
- Climate laboratory Holt, Department of Arctic and Marine Biology, UiT The Arctic University of Norway, Tromsø, Norway
- Norwegian Institute of Bioeconomy Research (NIBIO), Ås, Norway
- *Correspondence: Laura Jaakola,
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Álvarez-Flórez F, López-Cristoffanini C, Jáuregui O, Melgarejo LM, López-Carbonell M. Changes in ABA, IAA and JA levels during calyx, fruit and leaves development in cape gooseberry plants (Physalis peruviana L.). Plant Physiol Biochem 2017; 115:174-182. [PMID: 28371691 DOI: 10.1016/j.plaphy.2017.03.024] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/14/2017] [Revised: 03/24/2017] [Accepted: 03/28/2017] [Indexed: 05/28/2023]
Abstract
Changes in abscisic acid (ABA), indole-3-acetic acid (IAA) and jasmonic acid (JA) content in developing calyx, fruits and leaves of Physalis peruviana L. plants were analysed. Plant hormones have been widely studied for their roles in the regulation of various aspects related to plant development and, in particular, into their action during development and ripening of fleshly fruits. The obtained evidences suggest that the functions of these hormones are no restricted to a particular development stage, and more than one hormone is involved in controlling various aspects of plant development. Our results will contribute to understand the role of these hormones during growth and development of calyx, fruits and leaves in cape gooseberry plants. This work offers a good, quickly and efficiently protocol to extract and quantify simultaneously ABA, IAA and JA in different tissues of cape gooseberry plants.
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Affiliation(s)
- F Álvarez-Flórez
- Department of Biology, Faculty of Science, Universidad Nacional de Colombia, Bogotá, Colombia
| | - C López-Cristoffanini
- Department of Evolutive Biology, Ecology and Environmental Sciences, Plant Physiology Section, University of Barcelona, Av. Diagonal 643, 08028, Barcelona, Spain
| | - O Jáuregui
- Unitat de Tècniques Separatives, Centre Científics i Tecnològics, Universitat de Barcelona, c/ Baldiri i Reixac 10-12, 08028, Barcelona, Spain
| | - L M Melgarejo
- Department of Biology, Faculty of Science, Universidad Nacional de Colombia, Bogotá, Colombia
| | - M López-Carbonell
- Department of Evolutive Biology, Ecology and Environmental Sciences, Plant Physiology Section, University of Barcelona, Av. Diagonal 643, 08028, Barcelona, Spain.
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Wang L, Hua Q, Ma Y, Hu G, Qin Y. Comparative transcriptome analyses of a late-maturing mandarin mutant and its original cultivar reveals gene expression profiling associated with citrus fruit maturation. PeerJ 2017; 5:e3343. [PMID: 28533983 PMCID: PMC5438589 DOI: 10.7717/peerj.3343] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2017] [Accepted: 04/21/2017] [Indexed: 11/20/2022] Open
Abstract
Characteristics of late maturity in fruit are good agronomic traits for extending the harvest period and marketing time. However, underlying molecular basis of the late-maturing mechanism in fruit is largely unknown. In this study, RNA sequencing (RNA-Seq) technology was used to identify differentially expressed genes (DEGs) related to late-maturing characteristics from a late-maturing mutant 'Huawan Wuzishatangju' (HWWZSTJ) (Citrus reticulata Blanco) and its original line 'Wuzishatangju' (WZSTJ). A total of approximately 17.0 Gb and 84.2 M paried-end reads were obtained. DEGs were significantly enriched in the pathway of photosynthesis, phenylpropanoid biosynthesis, carotenoid biosynthesis, chlorophyll and abscisic acid (ABA) metabolism. Thirteen candidate transcripts related to chlorophyll metabolism, carotenoid biosynthesis and ABA metabolism were analyzed using real-time quantitative PCR (qPCR) at all fruit maturing stages of HWWZSTJ and WZSTJ. Chlorophyllase (CLH) and divinyl reductase (DVR) from chlorophyll metabolism, phytoene synthase (PSY) and capsanthin/capsorubin synthase (CCS) from carotenoid biosynthesis, and abscisic acid 8'-hydroxylase (AB1) and 9-cis-epoxycarotenoid dioxygenase (NCED1) from ABA metabolism were cloned and analyzed. The expression pattern of NCED1 indicated its role in the late-maturing characteristics of HWWZSTJ. There were 270 consecutive bases missing in HWWZSTJ in comparison with full-length sequences of NCED1 cDNA from WZSTJ. Those results suggested that NCED1 might play an important role in the late maturity of HWWZSTJ. This study provides new information on complex process that results in the late maturity of Citrus fruit at the transcriptional level.
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Affiliation(s)
- Lu Wang
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, Key Laboratory of Biology and Genetic Improvement of Horticultural Crops-South China, Ministry of Agriculture, College of Horticulture, South China Agricultural University, Guangzhou, China.,Yunnan Key Laboratory for Wild Plant Resources, Key Laboratory for Economic Plants and Biotechnology, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China
| | - Qingzhu Hua
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, Key Laboratory of Biology and Genetic Improvement of Horticultural Crops-South China, Ministry of Agriculture, College of Horticulture, South China Agricultural University, Guangzhou, China
| | - Yuewen Ma
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, Key Laboratory of Biology and Genetic Improvement of Horticultural Crops-South China, Ministry of Agriculture, College of Horticulture, South China Agricultural University, Guangzhou, China
| | - Guibing Hu
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, Key Laboratory of Biology and Genetic Improvement of Horticultural Crops-South China, Ministry of Agriculture, College of Horticulture, South China Agricultural University, Guangzhou, China
| | - Yonghua Qin
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, Key Laboratory of Biology and Genetic Improvement of Horticultural Crops-South China, Ministry of Agriculture, College of Horticulture, South China Agricultural University, Guangzhou, China
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Zorenc Z, Veberic R, Stampar F, Koron D, Mikulic-Petkovsek M. White versus blue: Does the wild 'albino' bilberry (Vaccinium myrtillus L.) differ in fruit quality compared to the blue one? Food Chem 2016; 211:876-82. [PMID: 27283708 DOI: 10.1016/j.foodchem.2016.05.142] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/09/2015] [Revised: 05/16/2016] [Accepted: 05/23/2016] [Indexed: 11/19/2022]
Abstract
Wild albino and blue bilberry fruit were analyzed to compare different fruit characteristics linked to the composition of primary and secondary metabolites. Compounds were identified using HPLC-MS and standard quality parameters were determined. Albino berries were significantly smaller, accumulated less water and were characterized by 23% higher dry weight. Soluble solids content and pH value were higher in albino bilberry and their surface was lighter and characterized by a yellow hue. Both bilberry forms accumulated identical individual sugars and organic acids; however, the albino form had 33% higher content of total sugars and 9% higher content of total organic acids compared to the blue type. Fifteen anthocyanins were identified in both forms, but in albino bilberries, individual anthocyanins were only detected in traces. Blue bilberry contained 1.6-fold higher levels of flavanols, 2.1-fold higher levels of flavonols, 2.5-fold higher levels of hydroxycinnamic acid derivatives and consequently, 4.6-fold higher total phenolic content.
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Affiliation(s)
- Zala Zorenc
- University of Ljubljana, Biotechnical Faculty, Department of Agronomy, Chair for Fruit, Wine and Vegetable Growing, Jamnikarjeva 101, SI-1000 Ljubljana, Slovenia.
| | - Robert Veberic
- University of Ljubljana, Biotechnical Faculty, Department of Agronomy, Chair for Fruit, Wine and Vegetable Growing, Jamnikarjeva 101, SI-1000 Ljubljana, Slovenia
| | - Franci Stampar
- University of Ljubljana, Biotechnical Faculty, Department of Agronomy, Chair for Fruit, Wine and Vegetable Growing, Jamnikarjeva 101, SI-1000 Ljubljana, Slovenia
| | - Darinka Koron
- Agricultural Institute of Slovenia, Hacquetova ulica 17, SI-1000 Ljubljana, Slovenia
| | - Maja Mikulic-Petkovsek
- University of Ljubljana, Biotechnical Faculty, Department of Agronomy, Chair for Fruit, Wine and Vegetable Growing, Jamnikarjeva 101, SI-1000 Ljubljana, Slovenia
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Karppinen K, Zoratti L, Nguyenquynh N, Häggman H, Jaakola L. On the Developmental and Environmental Regulation of Secondary Metabolism in Vaccinium spp. Berries. Front Plant Sci 2016; 7:655. [PMID: 27242856 PMCID: PMC4870239 DOI: 10.3389/fpls.2016.00655] [Citation(s) in RCA: 52] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/12/2016] [Accepted: 04/28/2016] [Indexed: 05/24/2023]
Abstract
Secondary metabolites have important defense and signaling roles, and they contribute to the overall quality of developing and ripening fruits. Blueberries, bilberries, cranberries, and other Vaccinium berries are fleshy berry fruits recognized for the high levels of bioactive compounds, especially anthocyanin pigments. Besides anthocyanins and other products of the phenylpropanoid and flavonoid pathways, these berries also contain other metabolites of interest, such as carotenoid derivatives, vitamins and flavor compounds. Recently, new information has been achieved on the mechanisms related with developmental, environmental, and genetic factors involved in the regulation of secondary metabolism in Vaccinium fruits. Especially light conditions and temperature are demonstrated to have a prominent role on the composition of phenolic compounds. The present review focuses on the studies on mechanisms associated with the regulation of key secondary metabolites, mainly phenolic compounds, in Vaccinium berries. The advances in the research concerning biosynthesis of phenolic compounds in Vaccinium species, including specific studies with mutant genotypes in addition to controlled and field experiments on the genotype × environment (G×E) interaction, are discussed. The recently published Vaccinium transcriptome and genome databases provide new tools for the studies on the metabolic routes.
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Affiliation(s)
- Katja Karppinen
- Genetics and Physiology Unit, University of Oulu, OuluFinland
- Climate laboratory Holt, Department of Arctic and Marine Biology, UiT the Arctic University of Norway, TromsøNorway
| | - Laura Zoratti
- Genetics and Physiology Unit, University of Oulu, OuluFinland
| | - Nga Nguyenquynh
- Genetics and Physiology Unit, University of Oulu, OuluFinland
| | - Hely Häggman
- Genetics and Physiology Unit, University of Oulu, OuluFinland
| | - Laura Jaakola
- Climate laboratory Holt, Department of Arctic and Marine Biology, UiT the Arctic University of Norway, TromsøNorway
- NIBIO, Norwegian Institute of Bioeconomy Research, ÅsNorway
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Karppinen K, Zoratti L, Sarala M, Carvalho E, Hirsimäki J, Mentula H, Martens S, Häggman H, Jaakola L. Carotenoid metabolism during bilberry (Vaccinium myrtillus L.) fruit development under different light conditions is regulated by biosynthesis and degradation. BMC Plant Biol 2016; 16:95. [PMID: 27098458 PMCID: PMC4839083 DOI: 10.1186/s12870-016-0785-5] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/02/2016] [Accepted: 04/14/2016] [Indexed: 05/06/2023]
Abstract
BACKGROUND Carotenoids are important pigments and precursors for central signaling molecules associated in fruit development and ripening. Carotenoid metabolism has been studied especially in the climacteric tomato fruit but the content of carotenoids and the regulation of their metabolism have been shown to be highly variable between fruit species. Non-climacteric berries of the genus Vaccinium are among the best natural sources of health-beneficial flavonoids but not studied previously for carotenoid biosynthesis. RESULTS In this study, carotenoid biosynthetic genes, PSY, PDS, ZDS, CRTISO, LCYB, LCYE, BCH and CYP450-BCH, as well as a carotenoid cleavage dioxygenase CCD1 were identified from bilberry (V. myrtillus L.) fruit and their expression was studied along with carotenoid composition during fruit development under different photoperiod and light quality conditions. Bilberry was found to be a good source of carotenoids among fruits and berries. The most abundant carotenoids throughout the berry development were lutein and β-carotene, which were accompanied by lower amounts of 9Z-β-carotene, violaxanthin, neoxanthin, zeaxanthin, antheraxanthin and β-cryptoxanthin. The expression patterns of the biosynthetic genes in ripening fruits indicated a metabolic flux towards β-branch of the carotenoid pathway. However, the carotenoid levels decreased in both the β-branch and ε,β-branch towards bilberry fruit ripening along with increased VmCCD1 expression, similarly to VmNCED1, indicating enzymatic carotenoid cleavage and degradation. Intense white light conditions increased the expression of the carotenoid biosynthetic genes but also the expression of the cleavage genes VmCCD1 and VmNCED1, especially in unripe fruits. Instead, mature bilberry fruits responded specifically to red/far-red light wavelengths by inducing the expression of both the carotenoid biosynthetic and the cleavage genes indicating tissue and developmental stage specific regulation of apocarotenoid formation by light quality. CONCLUSIONS This is the first report of carotenoid biosynthesis in Vaccinium berries. Our results indicate that both transcriptional regulation of the key biosynthetic genes and the enzymatic degradation of the produced carotenoids to apocarotenoids have significant roles in the determination of the carotenoid content and have overall effect on the metabolism during the bilberry fruit ripening.
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Affiliation(s)
- Katja Karppinen
- />Genetics and Physiology Unit, University of Oulu, P.O. Box 3000, FI-90014 Oulu, Finland
- />Climate laboratory Holt, Department of Arctic and Marine Biology, UiT the Arctic University of Norway, NO-9037 Tromsø, Norway
| | - Laura Zoratti
- />Genetics and Physiology Unit, University of Oulu, P.O. Box 3000, FI-90014 Oulu, Finland
| | - Marian Sarala
- />Genetics and Physiology Unit, University of Oulu, P.O. Box 3000, FI-90014 Oulu, Finland
| | - Elisabete Carvalho
- />Fondazione Edmund Mach, Research and Innovation Center, via E. Mach 1, 38010, San Michele all’Adige, TN Italy
| | - Jenni Hirsimäki
- />Genetics and Physiology Unit, University of Oulu, P.O. Box 3000, FI-90014 Oulu, Finland
| | - Helmi Mentula
- />Genetics and Physiology Unit, University of Oulu, P.O. Box 3000, FI-90014 Oulu, Finland
| | - Stefan Martens
- />Fondazione Edmund Mach, Research and Innovation Center, via E. Mach 1, 38010, San Michele all’Adige, TN Italy
| | - Hely Häggman
- />Genetics and Physiology Unit, University of Oulu, P.O. Box 3000, FI-90014 Oulu, Finland
| | - Laura Jaakola
- />Climate laboratory Holt, Department of Arctic and Marine Biology, UiT the Arctic University of Norway, NO-9037 Tromsø, Norway
- />NIBIO, Norwegian Institute of Bioeconomy Research, P.O. Box 115, NO-1431 Ås, Norway
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Zarrouk O, Brunetti C, Egipto R, Pinheiro C, Genebra T, Gori A, Lopes CM, Tattini M, Chaves MM. Grape Ripening Is Regulated by Deficit Irrigation/Elevated Temperatures According to Cluster Position in the Canopy. Front Plant Sci 2016; 7:1640. [PMID: 27895648 PMCID: PMC5108974 DOI: 10.3389/fpls.2016.01640] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/17/2016] [Accepted: 10/18/2016] [Indexed: 05/21/2023]
Abstract
The impact of water deficit on berry quality has been extensively investigated during the last decades. Nonetheless, there is a scarcity of knowledge on the performance of varieties exposed to a combination of high temperatures/water stress during the growing season and under vineyard conditions. The objective of this research was to investigate the effects of two irrigation regimes, sustained deficit irrigation (SDI, 30% ETc) and regulated deficit irrigation (RDI, 15% ETc) and of two cluster positions within the canopy (east- and west-exposed sides) on berry ripening in red Aragonez (Tempranillo) grapevines. The study was undertaken for two successive years in a commercial vineyard in South Portugal, monitoring the following parameters: pre-dawn leaf water potential, berry temperature, sugars, polyphenols, abscisic acid (ABA) and related metabolites. Additionally, expression patterns for different transcripts encoding for enzymes responsible for anthocyanin and ABA biosynthesis (VviUFGT, VvNCED1, VvβG1, VviHyd1, VviHyd2) were analyzed. In both years anthocyanin concentration was lower in RDI at the west side (RDIW- the hottest one) from véraison onwards, suggesting that the most severe water stress conditions exacerbated the negative impact of high temperature on anthocyanin. The down-regulation of VviUFGT expression revealed a repression of the anthocyanin synthesis in berries of RDIW, at early stages of berry ripening. At full-maturation, anthocyanin degradation products were detected, being highest at RDIW. This suggests that the negative impact of water stress and high temperature on anthocyanins results from the repression of biosynthesis at the onset of ripening and from degradation at later stages. On the other hand, berries grown under SDI displayed a higher content in phenolics than those under RDI, pointing out for the attenuation of the negative temperature effects under SDI. Irrigation regime and berry position had small effect on free-ABA concentration. However, ABA catabolism/conjugation process and ABA biosynthetic pathway were affected by water and heat stresses. This indicates the role of ABA-GE and catabolites in berry ABA homeostasis under abiotic stresses. Principal component analysis (PCA) showed that the strongest influence in berry ripening is the deficit irrigation regime, while temperature is an important variable determining the improvement or impairment of berry quality by the deficit irrigation regime. In summary, this work shows the interaction between irrigation regime and high temperature on the control of berry ripening.
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Affiliation(s)
- Olfa Zarrouk
- Instituto de Tecnologia Química e Biológica, Universidade NOVA de LisboaOeiras, Portugal
- *Correspondence: Olfa Zarrouk
| | - Cecilia Brunetti
- Trees and Timber Institute, The National Research Council of ItalyFlorence, Italy
- Department of Plant, Soil and Environmental Sciences, University of FlorenceFlorence, Italy
| | - Ricardo Egipto
- Linking Landscape, Environment, Agriculture and Food (LEAF), Instituto Superior de Agronomia, Universidade de LisboaLisboa, Portugal
| | - Carla Pinheiro
- Instituto de Tecnologia Química e Biológica, Universidade NOVA de LisboaOeiras, Portugal
- Faculdade de Ciências e Tecnologia, Universidade NOVA de LisboaCaparica, Portugal
- Carla Pinheiro
| | - Tânia Genebra
- Instituto de Tecnologia Química e Biológica, Universidade NOVA de LisboaOeiras, Portugal
| | - Antonella Gori
- Trees and Timber Institute, The National Research Council of ItalyFlorence, Italy
- Department of Plant, Soil and Environmental Sciences, University of FlorenceFlorence, Italy
| | - Carlos M. Lopes
- Linking Landscape, Environment, Agriculture and Food (LEAF), Instituto Superior de Agronomia, Universidade de LisboaLisboa, Portugal
| | - Massimiliano Tattini
- Department of Biology, Agriculture and Food Sciences, Institute for Sustainable Plant Protection, The National Research Council of ItalyFlorence, Italy
| | - M. Manuela Chaves
- Instituto de Tecnologia Química e Biológica, Universidade NOVA de LisboaOeiras, Portugal
- Linking Landscape, Environment, Agriculture and Food (LEAF), Instituto Superior de Agronomia, Universidade de LisboaLisboa, Portugal
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Mou W, Li D, Luo Z, Mao L, Ying T. Transcriptomic Analysis Reveals Possible Influences of ABA on Secondary Metabolism of Pigments, Flavonoids and Antioxidants in Tomato Fruit during Ripening. PLoS One 2015; 10:e0129598. [PMID: 26053166 PMCID: PMC4460000 DOI: 10.1371/journal.pone.0129598] [Citation(s) in RCA: 52] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/26/2014] [Accepted: 05/11/2015] [Indexed: 12/18/2022] Open
Abstract
Abscisic acid (ABA) has been proven to be involved in the regulation of climacteric fruit ripening, but a comprehensive investigation of its influence on ripening related processes is still lacking. By applying the next generation sequencing technology, we conducted a comparative analysis of the effects of exogenous ABA and NDGA (Nordihydroguaiaretic acid, an inhibitor of ABA biosynthesis) on tomato fruit ripening. The high throughput sequencing results showed that out of the 25728 genes expressed across all three samples, 10388 were identified as significantly differently expressed genes. Exogenous ABA was found to enhance the transcription of genes involved in pigments metabolism, including carotenoids biosynthesis and chlorophyll degradation, whereas NDGA treatment inhibited these processes. The results also revealed the crucial role of ABA in flavonoids synthesis and regulation of antioxidant system. Intriguingly, we also found that an inhibition of endogenous ABA significantly enhanced the transcriptional abundance of genes involved in photosynthesis. Our results highlighted the significance of ABA in regulating tomato ripening, which provided insight into the regulatory mechanism of fruit maturation and senescence process.
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Affiliation(s)
- Wangshu Mou
- College of Biosystems Engineering and Food Science, Fuli Institute of Food Science, Zhejiang Key Laboratory for Agro-Food Processing, Zhejiang R & D Center for Food Technology and Equipment, Zhejiang University, Hangzhou, People’s Republic of China
| | - Dongdong Li
- College of Biosystems Engineering and Food Science, Fuli Institute of Food Science, Zhejiang Key Laboratory for Agro-Food Processing, Zhejiang R & D Center for Food Technology and Equipment, Zhejiang University, Hangzhou, People’s Republic of China
| | - Zisheng Luo
- College of Biosystems Engineering and Food Science, Fuli Institute of Food Science, Zhejiang Key Laboratory for Agro-Food Processing, Zhejiang R & D Center for Food Technology and Equipment, Zhejiang University, Hangzhou, People’s Republic of China
| | - Linchun Mao
- College of Biosystems Engineering and Food Science, Fuli Institute of Food Science, Zhejiang Key Laboratory for Agro-Food Processing, Zhejiang R & D Center for Food Technology and Equipment, Zhejiang University, Hangzhou, People’s Republic of China
| | - Tiejin Ying
- College of Biosystems Engineering and Food Science, Fuli Institute of Food Science, Zhejiang Key Laboratory for Agro-Food Processing, Zhejiang R & D Center for Food Technology and Equipment, Zhejiang University, Hangzhou, People’s Republic of China
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Kadomura-Ishikawa Y, Miyawaki K, Takahashi A, Masuda T, Noji S. Light and abscisic acid independently regulated FaMYB10 in Fragaria × ananassa fruit. Planta 2015; 241:953-65. [PMID: 25534946 DOI: 10.1007/s00425-014-2228-6] [Citation(s) in RCA: 63] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/24/2014] [Accepted: 12/12/2014] [Indexed: 05/18/2023]
Abstract
Light and ABA independently regulated anthocyanin biosynthesis via activation of FaMYB10 expression. FaMYB10 accelerated anthocyanin synthesis of pelargonidin 3-glucoside and cyanidin 3-glucoside during strawberry fruit ripening. Light is an integral factor in fruit ripening. Ripening in non-climacteric fruit is also effected by the plant hormone abscisic acid (ABA). However, how light and/or ABA regulate fruit ripening processes, such as strawberry color development remains elusive. Results of the present study showed light and ABA regulated strawberry fruit coloration via activation of FaMYB10 expression, an R2R3 MYB transcription factor. Light exposure increased FaMYB10 transcript levels, flavonoid pathway genes, and anthocyanin content. Exogenous ABA promoted FaMYB10 expression, and anthocyanin content, accompanied by increased ABA-responsive transcript levels and flavonoid pathway genes. ABA biosynthesis inhibitor treatment, and RNAi-mediated down-regulation of the ABA biosynthetic gene (9-cis epoxycarotenoid dioxygenase: FaNCED1), and ABA receptor (magnesium chelatase H subunit: FaCHLH/ABAR) showed inverse ABA effects. Furthermore, additive effects were observed in anthocyanin accumulation under combined light and ABA, indicating independent light and ABA signaling pathways. FaMYB10 down-regulation by Agrobacterium-mediated RNA interference (RNAi) in strawberry fruits showed decreased pelargonidin 3-glucoside and cyanidin 3-glucoside levels, accompanied by consistent flavonoid pathway gene expression levels. FaMYB10 over-expression showed opposite FaMYB10 RNAi phenotypes, particularly cyanidin 3-glucoside synthesis by FaMYB10, which was correlated with FaF3'H transcript levels. These data provided evidence that light and ABA promoted FaMYB10 expression, resulting in anthocyanin accumulation via acceleration of flavonoid pathway gene expression. Finally, our results suggested FaMYB10 serves a role as a signal transduction mediator from light and ABA perception to anthocyanin synthesis in strawberry fruit.
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Affiliation(s)
- Yasuko Kadomura-Ishikawa
- Department of Nutrition, Faculty of Medicine, The University of Tokushima, 3-18-15 Kuramoto-cho, Tokushima, 770-8503, Japan,
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Zhang YJ, Wang XJ, Wu JX, Chen SY, Chen H, Chai LJ, Yi HL. Comparative transcriptome analyses between a spontaneous late-ripening sweet orange mutant and its wild type suggest the functions of ABA, sucrose and JA during citrus fruit ripening. PLoS One 2014; 9:e116056. [PMID: 25551568 PMCID: PMC4281182 DOI: 10.1371/journal.pone.0116056] [Citation(s) in RCA: 46] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/08/2014] [Accepted: 12/01/2014] [Indexed: 11/19/2022] Open
Abstract
A spontaneous late-ripening mutant of 'Jincheng' (C. sinensis L. Osbeck) sweet orange exhibited a delay of fruit pigmentation and harvesting. In this work, we studied the processes of orange fruit ripening through the comparative analysis between the Jincheng mutant and its wild type. This study revealed that the fruit quality began to differ on 166th days after anthesis. At this stage, fruits were subjected to transcriptome analysis by RNA sequencing. 13,412 differentially expressed unigenes (DEGs) were found. Of these unigenes, 75.8% were down-regulated in the wild type, suggesting that the transcription level of wild type was lower than that of the mutant during this stage. These DEGs were mainly clustered into five pathways: metabolic pathways, plant-pathogen interaction, spliceosome, biosynthesis of plant hormones and biosynthesis of phenylpropanoids. Therefore, the expression profiles of the genes that are involved in abscisic acid, sucrose, and jasmonic acid metabolism and signal transduction pathways were analyzed during the six fruit ripening stages. The results revealed the regulation mechanism of sweet orange fruit ripening metabolism in the following four aspects: First, the more mature orange fruits were, the lower the transcription levels were. Second, the expression level of PME boosted with the maturity of the citrus fruit. Therefore, the expression level of PME might represent the degree of the orange fruit ripeness. Third, the interaction of PP2C, PYR/PYL, and SnRK2 was peculiar to the orange fruit ripening process. Fourth, abscisic acid, sucrose, and jasmonic acid all took part in orange fruit ripening process and might interact with each other. These findings provide an insight into the intricate process of sweet orange fruit ripening.
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Affiliation(s)
- Ya-Jian Zhang
- Key Laboratory of Horticultural Plant Biology, Ministry of Education, Huazhong Agricultural University, Wuhan, 430070, China
- National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, 430070, China
| | - Xing-Jian Wang
- Key Laboratory of Horticultural Plant Biology, Ministry of Education, Huazhong Agricultural University, Wuhan, 430070, China
- National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, 430070, China
| | - Ju-Xun Wu
- Key Laboratory of Horticultural Plant Biology, Ministry of Education, Huazhong Agricultural University, Wuhan, 430070, China
- National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, 430070, China
| | - Shan-Yan Chen
- Key Laboratory of Horticultural Plant Biology, Ministry of Education, Huazhong Agricultural University, Wuhan, 430070, China
- National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, 430070, China
- Kunming Academy of Agricultural Sciences, Kunming, 650000, China
| | - Hong Chen
- Engineering Technology College, Huazhong Agricultural University, Wuhan, 430070, China
| | - Li-Jun Chai
- Key Laboratory of Horticultural Plant Biology, Ministry of Education, Huazhong Agricultural University, Wuhan, 430070, China
- National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, 430070, China
- * E-mail: (LJC); (HLY)
| | - Hua-Lin Yi
- Key Laboratory of Horticultural Plant Biology, Ministry of Education, Huazhong Agricultural University, Wuhan, 430070, China
- National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, 430070, China
- * E-mail: (LJC); (HLY)
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Abstract
The phytohormone abscisic acid (ABA) plays a crucial role not only in fruit development and ripening, but also in adaptive responses to biotic and abiotic stresses. In these processes, the actions of ABA are under the control of complex regulatory mechanisms involving ABA metabolism, signal transduction, and transport. The endogenous ABA content is determined by the dynamic balance between biosynthesis and catabolism, processes which are regulated by 9-cis-epoxycarotenoid dioxygenase (NCED) and ABA 8'-hydroxylase (CYP707A), respectively. ABA conjugation by cytosolic UDP-glucosyltransferases, or release by β-glucosidases, is also important for maintaining ABA homeostasis. Recently, multiple putative ABA receptors localized at different subcellular sites have been reported. Among these is a major breakthrough in the field of ABA signalling-the identification of a signalling cascade involving the PYR/PYL/RCAR protein family, the type 2C protein phosphatases (PP2Cs), and subfamily 2 of the SNF1-related kinases (SnRK2s). With regard to transport, two ATP-binding cassette (ABC) proteins and two ABA transporters in the nitrate transporter 1/peptide transporter (NRT1/PTR) family have been identified. In this review, we summarize recent research progress on the role of ABA in fruit ripening, stress response, and transcriptional regulation, and also the functional verification of both ABA-responsive and ripening-related genes. In addition, we suggest possible commercial applications of genetic manipulation of ABA signalling to improve fruit quality and yields.
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Affiliation(s)
- Ping Leng
- College of Agronomy and Biotechnology, China Agricultural University, PR China
| | - Bing Yuan
- Department of Chemistry and Biochemistry, University of Arizona, 1306 East University BouleVard, Tucson, AZ, USA
| | - Yangdong Guo
- College of Agronomy and Biotechnology, China Agricultural University, PR China
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Zoratti L, Karppinen K, Luengo Escobar A, Häggman H, Jaakola L. Light-controlled flavonoid biosynthesis in fruits. Front Plant Sci 2014; 5:534. [PMID: 25346743 PMCID: PMC4191440 DOI: 10.3389/fpls.2014.00534] [Citation(s) in RCA: 213] [Impact Index Per Article: 21.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/05/2014] [Accepted: 09/19/2014] [Indexed: 05/18/2023]
Abstract
Light is one of the most important environmental factors affecting flavonoid biosynthesis in plants. The absolute dependency of light to the plant development has driven evolvement of sophisticated mechanisms to sense and transduce multiple aspects of the light signal. Light effects can be categorized in photoperiod (duration), intensity (quantity), direction and quality (wavelength) including UV-light. Recently, new information has been achieved on the regulation of light-controlled flavonoid biosynthesis in fruits, in which flavonoids have a major contribution on quality. This review focuses on the effects of the different light conditions on the control of flavonoid biosynthesis in fruit producing plants. An overview of the currently known mechanisms of the light-controlled flavonoid accumulation is provided. R2R3 MYB transcription factors are known to regulate by differential expression the biosynthesis of distinct flavonoids in response to specific light wavelengths. Despite recent advances, many gaps remain to be understood in the mechanisms of the transduction pathway of light-controlled flavonoid biosynthesis. A better knowledge on these regulatory mechanisms is likely to be useful for breeding programs aiming to modify fruit flavonoid pattern.
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Affiliation(s)
- Laura Zoratti
- Department of Biology, University of OuluOulu, Finland
| | | | - Ana Luengo Escobar
- Programa de Doctorado en Ciencias de Recursos Naturales, Universidad de la FronteraTemuco, Chile
| | - Hely Häggman
- Department of Biology, University of OuluOulu, Finland
| | - Laura Jaakola
- Climate laboratory Holt, Department of Arctic and Marine Biology, UiT The Arctic University of NorwayTromsø, Norway
- Norwegian Institute for Agricultural and Environmental Research, Bioforsk Nord HoltTromsø, Norway
- *Correspondence: Laura Jaakola, Climate laboratory Holt, Department of Arctic and Marine Biology, UiT The Arctic University of Norway, Holtveien 62, NO-9037 Tromsø, Norway e-mail:
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Zoratti L, Karppinen K, Luengo Escobar A, Häggman H, Jaakola L. Light-controlled flavonoid biosynthesis in fruits. Front Plant Sci 2014; 5:534. [PMID: 25346743 DOI: 10.3389/fpls.2014.005341996] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Received: 07/05/2014] [Accepted: 09/19/2014] [Indexed: 05/20/2023]
Abstract
Light is one of the most important environmental factors affecting flavonoid biosynthesis in plants. The absolute dependency of light to the plant development has driven evolvement of sophisticated mechanisms to sense and transduce multiple aspects of the light signal. Light effects can be categorized in photoperiod (duration), intensity (quantity), direction and quality (wavelength) including UV-light. Recently, new information has been achieved on the regulation of light-controlled flavonoid biosynthesis in fruits, in which flavonoids have a major contribution on quality. This review focuses on the effects of the different light conditions on the control of flavonoid biosynthesis in fruit producing plants. An overview of the currently known mechanisms of the light-controlled flavonoid accumulation is provided. R2R3 MYB transcription factors are known to regulate by differential expression the biosynthesis of distinct flavonoids in response to specific light wavelengths. Despite recent advances, many gaps remain to be understood in the mechanisms of the transduction pathway of light-controlled flavonoid biosynthesis. A better knowledge on these regulatory mechanisms is likely to be useful for breeding programs aiming to modify fruit flavonoid pattern.
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Affiliation(s)
- Laura Zoratti
- Department of Biology, University of Oulu Oulu, Finland
| | | | - Ana Luengo Escobar
- Programa de Doctorado en Ciencias de Recursos Naturales, Universidad de la Frontera Temuco, Chile
| | - Hely Häggman
- Department of Biology, University of Oulu Oulu, Finland
| | - Laura Jaakola
- Climate laboratory Holt, Department of Arctic and Marine Biology, UiT The Arctic University of Norway Tromsø, Norway ; Norwegian Institute for Agricultural and Environmental Research, Bioforsk Nord Holt Tromsø, Norway
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Jaakola L. New insights into the regulation of anthocyanin biosynthesis in fruits. Trends Plant Sci 2013; 18:477-83. [PMID: 23870661 DOI: 10.1016/j.tplants.2013.06.003] [Citation(s) in RCA: 587] [Impact Index Per Article: 53.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/18/2013] [Revised: 06/04/2013] [Accepted: 06/17/2013] [Indexed: 05/18/2023]
Abstract
Anthocyanins are important health-promoting pigments that make a major contribution to the quality of fruits. The biosynthetic pathway leading to anthocyanins is well known and the key regulatory genes controlling the pathway have been isolated in many species. Recently, a considerable amount of new information has been gathered on the developmental and environmental regulation of anthocyanin biosynthesis in fruits, specifically the impact of regulation through light. New discoveries have begun to reveal links between the developmental regulatory network and the specific regulators of anthocyanin biosynthesis during fruit ripening. In this opinion article, a simplified model for the different regulatory networks involved with anthocyanin production in fruit is proposed.
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Affiliation(s)
- Laura Jaakola
- Climate Laboratory, Department of Arctic and Marine Biology, University of Tromsø, Norway.
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