Characteristics of denitrification genes and relevant enzyme activities in heavy-metal polluted soils remediated by biochar and compost

Plant-derived phenolic antioxidants inhibit degradation of petroleum hydrocarbons via denitrification in coastal wetlands soils

Plant-derived phenolic compounds could regulate redox reactions due to their antioxidative properties. In this study, soils from coastal wetlands including bare flat (BF), cyperus(Cyperus malaccensis) (CY), reed (Phragmites australis) (RE), and mangrove(Kandelia obovata) (MA) in Minjiang estuary region were selected. Anaerobic microcosm incubation experiments were conducted to investigate the petroleum hydrocarbon (PH) degradation process through denitrification. In addition, effect of plant-derived antioxidants (carotenoids, anthocyanins, flavones, and phenolic acids) on the activity of denitrifying bacteria, enzymes, and genes were studied. The results showed that addition of NO3- significantly (p < 0.05) promoted PH degradation in BF, RE, and CY by 14.1 %-31.7 % while not influenced on PH degradation in MA. Bacteria that could degrade petroleum through denitrification (e.g., Burkholderia and Rhodococcus) showed much higher abundances in CY and RE than in MA. Antioxidants of cover plants showed large varieties with RE containing highest contents of carotenoids while MA containing highest contents of phenolic compounds (anthocyanins, flavones, and phenolic acids). These phenolic antioxidants significantly reduced the activity of NO3- and NO2- reductase and abundances of denitrification genes (nirK) and the inhibition effect was positively correlated to Trolox Equivalent Antioxidant Capacity (TEAC). Overall, our results demonstrate the key regulation role of plant-derived antioxidants in OC degradation in eutrophic wetlands.

Integrated evaluation for advanced removal of nitrate using novel solid carbon biochar/corncob/PHBV composite: Insight into electron transfer and metabolic pathways

This study developed a novel Biochar/Corncob/PHBV (BCP) composite material, integrating the electron transfer capability of biochar, the cost-effectiveness of corncob, and the sustained carbon release performance of PHBV. The BCP system achieved a maximum nitrate removal efficiency of 97.3 %, significantly outperforming the single PHBV system (91.05 %), while effectively reducing nitrous oxide and other greenhouse gas emissions. It also demonstrated stable carbon release and enhanced electron transfer capabilities, contributing to a more sustainable denitrification process. The physical and chemical characterization of BCP confirmed that its superior performance is attributed to the uniformly distributed functional groups (e.g., CO and -COOH) on the surface and its porous structure, which facilitated electron transfer and microbial adhesion. Metagenomic and microbial analyses further revealed that BCP enriched functional genera such as Cellulomonas and Chryseobacterium and significantly increased the abundance of key functional genes related to nitrate reduction (e.g., NaR and NiR), enhancing organic matter decomposition and microbial nitrogen transformation. Beyond improving nitrate removal efficiency compared to PHBV, the BCP material offers practical engineering value by addressing carbon source limitations in long-term wastewater treatment applications. Its enhanced electron transfer and microbial enrichment suggest strong potential for application in constructed wetlands, biofilters, and other decentralized wastewater treatment systems. The study demonstrates that the BCP composite is not only a viable alternative to traditional PHBV but also a cost-effective and environmentally friendly material with broad applicability in nitrogen pollution control.

Confirming the key factors influencing the biosynthesis and regulation of organic nitrogen in composting

Organic nitrogen (ON) possesses the ability to sustain a stable nitrogen supply fertility during composting. However, research on the biosynthesis and regulation of ON remains limited. The results indicated that despite variations in microbial communities between the chicken manure composting (T group) and kitchen waste digestate composting (F group), their functional genes were remarkably similar, and the microorganisms exhibited similar functions. The microbial community structure of T group was more complex than that of F group. Network analysis identified Saccharomonospora, Corynebacterium, and Thermobifida as the core microorganisms in T group, whereas Oceanobacillus, Staphylococcus, and Fictibacillus were predominant in F group. These microorganisms play a role in the biosynthesis and regulation of various forms of ON (including amino acid nitrogen (AAN), amino sugar nitrogen (ASN), amide nitrogen (AN) and hydrolyzable unknown nitrogen (HUN)) and may contribute to differences in ON production due to the distinct nature of the materials. The core functional genes of the two groups of materials were determined by random forest model. Although differences in functional genes were present between F group and T group, the most crucial genes for ON biosynthesis in both groups were those with ammonia assimilation (such as glnE, gltB, gltD, etc.). The nitrogen transformation processes associated with these core genes can be modulated by managing the activity of multifunctional microorganisms, particularly through the control of ammonia assimilation, nitrate reduction, and ammonification, which are related to NH4+ levels. Notably, electric conductivity (EC), temperature (Tem.), pH, and NH4+ were the pivotal environmental factors influencing the biosynthesis of ON. This investigation enhances our understanding of the previously underexplored mechanisms of ON biosynthesis and regulation.

Deciphering the driving mechanism of microbial community for rapid stabilization and lignocellulose degradation during waste semi-aerobic bioreactor landfilling with multifunctional microbial inoculum

Owing to the massive refractory lignocellulose and leachate-organic loads, the stabilization of municipal solid waste (MSW) landfill is often prolonged, resulting in environmental burdens. Herein, various assembled multifunctional microbial inoculums (MMIs) were introduced into the semi-aerobic bioreactor landfill (SABL) to investigate the bioaugmentation impacts. Compared to control (CK) and other MMIs treatments (G1-G3), LD + LT + DM inoculation (G4) significantly increased volatile solids degradation (9.72-45.03 %), while reducing chemical oxygen demand (COD) content (10.34-51.85 %) and ammonia nitrogen concentration (80.71-90.95 %) in the leachate. G4 also exhibited significantly higher degradation of cellulose and hemicellulose, achieving 0.99 and 1.94 times higher efficiency than CK, respectively. Microbial analysis revealed that LD + LT + DM reshaped microbial communities composition of SABL, with most of the introduced microorganisms (Enterobacter, Sphingobacterium, Streptomyces, etc.) successfully colonizing, and stimulating indigenous functional microbes associated with organic matter decomposition. Additionally, microbial interactions were strengthened in G4, accompanied by the higher abundance of 11 biomarkers and enzymes involved in lignocellulose degradation and ammonia nitrogen conversion. Overall, LD + LT + DM maximized MMI function by reconstructing synergistic core microbes. These findings highlight the superiority of LD + LT + DM in simultaneously regulating the microbial composition of lignocellulose-rich waste landfills, expediting MSW decomposition, improving leachate treatment, and mitigating odor emissions, offering valuable insights for efficient MSW management.

Soil remediation by co-disposal in sintered brick kilns: Migration characteristics of heavy metals in bricks and the kiln

Rapid industrialization has led to the widespread accumulation of heavy metal-contaminated soils, posing significant environmental and health risks. Utilizing remediated soil for the production of sintered bricks offers a sustainable and effective solution. However, the migration and immobilization mechanisms of heavy metals during the sintering process, both within the tunnel kiln and the brick matrix, require detailed investigation. This study examined the distribution of heavy metals in the tunnel kiln and analyzed the differences in heavy metal content and leaching behavior between the inner and outer layers of the bricks. Bricks containing 15% remediated soil were prepared, and it was observed that the majority of heavy metals were effectively immobilized, with retention rates ranging from 90.6% to 99.9%. Selenium (Se), however, exhibited significant volatility, with a retention rate of only 64.3%. The outer layer of the brick body contained higher concentrations of As and Pb compared to the inner layer. Conversely, leaching tests showed lower leaching rates of Mn, Ni, Cu, and Zn in the inner layers, while As and Pb exhibited higher leaching rates in the inner layers. These findings underscore the varying migration and transformation behaviors of different heavy metals during sintering, both within the kiln and the brick layers. The study highlights the potential of doped sintered bricks as sustainable building materials, ensuring effective heavy metal stabilization with minimal environmental risk, and providing a promising pathway for the safe reuse of contaminated soils.

Unlocking the potential differences and effects of the anode and cathode regions on N2O emissions during electric field-assisted aerobic composting

Electric field-assisted aerobic composting (EAC) is a novel strategy for effectively mitigating nitrous oxide (N2O) emissions, but its deeper effects require further exploration. In this study, the differences in N2O emissions between the anode regions (AR) and cathode regions (CR) during EAC were evaluated. The cumulative N2O emission from the compost in CR was 32.77% lower than in AR. Compared to AR, the physicochemical properties of CR contribute to the reduction of N2O emission. PLS-PM analysis suggested that differences in N2O emission are primarily regulated by N-cycling related functional genes and N-containing substances, with different regulatory effects. In AR, functional genes and N-containing substances are significantly positively correlated with N2O emissions, whereas in CR, they are significantly negatively correlated. This study highlights the differences and effects of electrode regions in EAC on N2O emissions, offering new perspectives for future optimization.

Improving soil properties and Sesbania growth through combined organic amendment strategies in a coastal saline-alkali soil

Improving the quality of degraded coastal saline-alkali soil and promoting plant growth are key challenges in the restoration of ecological functions in coastal regions. Organic ameliorants such as effective microbial (EM) agent, biochar, and organic compost have been proposed as sustainable solutions, but limited research has explored the combined effects of these amendments. This study investigates five organic improvement strategies: individual applications of EM, corn straw biochar (CSB), and sewage sludge-reed straw compost (COM), along with combined treatments of CSB + EM and COM + EM, on Sesbania growth in a pot experiment. The results demonstrated that, compared to the separate applications, the combined strategies (CSB + EM and COM + EM) exhibited a greater improvement in Sesbania growth; for instance, the plant dry weight was 4.61-12.1 times that of the control. The improved plant growth was linked to enhanced nutrient uptake and changes in soil properties. The combined strategies, particularly COM + EM, resulted in greater decreases in soil pH (decreased by 2.79%-3.49% compared to the control) and better improvements in soil nutrient content, quantity and quality of dissolved organic matter, microbial community diversity, and the abundance of plant growth-promoting rhizobacteria (PGPR), e.g., Bacillus. Spearman correlation and structural equation modeling confirmed that these soil improvements directly contributed to enhanced plant nutrient uptake. Overall, these findings suggest that combined strategies of COM + EM and CSB + EM, particularly the former, are highly effective for the remediation of coastal saline-alkali soils, offering a promising approach for improving soil fertility and plant productivity in degraded coastal ecosystems.

Deciphering the functional assembly of microbial communities driven by heavy metals in the tidal soils of Hangzhou Bay

Understanding the interaction between heavy metals and soil microbiomes is essential for maintaining ecosystem health and functionality in the face of persistent human-induced challenges. This study investigated the complex relationships between heavy metal contamination and the functional characteristics of soil microbial communities in the tidal soils of Hangzhou Bay, a region experiencing substantial environmental pressure due to its proximity to densely populated and industrialized regions. The north-shore sampling site showed moderate contaminations (mg/kg) of total arsenic (16.61 ± 1.13), cadmium (0.3 ± 0.05), copper (31.28 ± 1.23), nickel (37.44 ± 2.74), lead (34.29 ± 5.99), and zinc (120.8 ± 5.96), which are 1.29-2.94 times higher than the geochemical background values in Hangzhou Bay and adjacent areas. In contrast, the south-shore sampling site showed slightly higher levels of total arsenic (13.76 ± 1.35) and cadmium (0.13 ± 0.02) than the background values. Utilizing metagenomic sequencing, we decoded microbial functional genes essential for nitrogen, phosphorus, sulfur, and methane biogeochemical cycles. Although soil available nickel content was relatively low at 1 mg/kg, it exhibited strong associations with diverse microbial genes and biogeochemical pathways. Four key genes-hxlB, glpX, opd, and phny-emerged as pivotal players in the interactions with available nickel, suggesting the adaptability of microbial metabolic responses to heavy metal. Additionally, microbial genera such as Gemmatimonas and Ilumatobacter, which harbored diverse functional genes, demonstrated potential interactions with soil nickel. These findings highlight the importance of understanding heavy metal-soil microbiome dynamics for effective environmental management strategies in the tidal soils of Hangzhou Bay, with the goal of preserving ecosystem health and functionality amidst ongoing anthropogenic challenges.

Transforming restored heavy metal-contaminated soil into eco-friendly bricks: An insight into heavy metal stabilization and environmental safety

Materialization is currently the primary method for utilizing restored heavy metal-contaminated soil (RHMCS). However, compared to ordinary building materials, the migration and transformation mechanisms of heavy metals (HMs) while preparing these materials remain unclear. To bridge these gaps, this study investigated the migration and transformation mechanisms of As and Pb during the sintering of RHMCS into bricks. This study is the first to conduct a systematic study from the perspectives of both the inner and outer brick layers on the patterns and mechanisms of HM migration and transformation during the sintering process, along with the safety of product utilization. Approximately 90% of As and 36% of Pb migrated out of the RHMCS, with significant transformations observed after sintering. Adjusting the sintering parameters increased migration at long dwell times and high temperatures. These findings indicate different migration behaviors and transformations of HMs within the brick layers, emphasizing the need for cautious application and potential secondary pollution risks. A potential ecological risk index confirmed the safety of the bricks in accordance with construction material standards. Overall, this study provides crucial insights into safe and effective RHMCS utilization, contributing significantly to environmental remediation and sustainable construction practices.

Assembly of root-associated bacterial community and soil health in cadmium-contaminated soil affected by nano/bulk-biochar compost associations

Biochar (BC) has been proven effective in promoting the production of safety food in cadmium (Cd)-polluted soil and the impact can be further enhanced through interaction with compost (CM). However, there existed unclear impacts of biochar with varying particle sizes in conjunction with compost on microbiome composition, rhizosphere functions, and soil health. Hence, in this study, two bulk-biochar derived from wood chips and pig manure were fabricated into nano-biochar using a ball-milling method. Subsequently, in a field experiment, the root-associated bacterial community and microbial functions of lettuce were evaluated in respond to Cd-contaminated soil remediated with nano/bulk-BCCM. The results showed that compared to bulk-BCCM, nano-BCCM significantly reduced the Cd concentration in the edible part of lettuce and the available Cd in the soil. Both nano-BCCM and bulk-BCCM strongly influenced the composition of bacterial communities in the four root-associated niches, and enhanced rhizosphere functions involved in nitrogen, phosphorus, and carbon cycling, as well as the relative abundance and biodiversity of keystone modules in rhizosphere soil. Furthermore, soil quality index analysis indicated that nano-BCCM exhibited greater potential than bulk-BCCM in maintaining soil health. The data revealed that nano-BCCM could regulate the Cd concentration in lettuce shoot by promoting microbial biodiversity of keystone modules in soil-root continuum and rhizosphere bacterial functions. These findings suggest that nano-biochar compost associations can be a superior strategy for enhancing microbial functions, maintaining soil health, and ensuring crop production safety in the Cd-contaminated soil compared to the mix of bulk-biochar and compost.

Biostimulation accelerates landfill stabilization and resource utilization efficiency, providing feasible technical support for the overall lifecycle management of landfills

Although sanitary landfill is one of the principal municipal solid waste (MSW) treatment and disposal methods, its limitations, such as insufficient use of resources, long stability time, and high risk of environmental pollution, must be urgently resolved. The effect of multifunctional microbial community (MMC) inoculation on MSW landfill process was investigated using simulated anaerobic bioreactor landfill (ABL), and composition and microbial community structure of waste, leachate water quality, and gas production were monitored. MMC inoculation significantly accelerated lignocellulose degradation, and the (Hemicellulose content + Cellulose content)/Lignin content ((C + H)/L) of MMC inoculation treatment was 0.89 ± 0.04 on day 44, which was significantly lower than that of the control group (1.14 ± 0.02). At the end of the landfill process, the reductive organic matter, ammonia nitrogen, and volatile fatty acids in the leachate of the MMC group decreased to 9400.00 ± 288.68, 332.78 ± 5.77, and 79.33 ± 6.44 mg L-1, respectively, significantly lower than those of the control group (24,167.00 ± 208.17, 551.14 ± 5.60, and 156.33 ± 8.22 mg L-1). Meanwhile, MMC inoculation increased the methane production to 118.12 ± 5.42 L kg-1 of dry matter, significantly higher than the output of the control group (60.60 ± 2.24 L kg-1). MMC inoculation optimized the microbial community structure in ABL and increased lignocellulose-degrading microorganisms (Brevundimonas, Cellvibrio, Leifsonia, and Devosia) and methanogen (Methanosaeta and Methanoculleus) abundance in the middle stage of landfill. Moreover, MMC introduction improved the abundance of carbon metabolism enzymes and increased saprophytic fungal abundance by 30.09% in the middle stage of landfill. Overall, these findings may help in developing an effective method to increase the lifespan of landfills and enhance their post-closure management.

Insight into mitigation mechanisms of N2O emission by biochar during agricultural waste composting

The effects and mitigation mechanisms of biochar added at different composting stages on N2O emission were investigated. Four treatments were set as follows: CK: control, BB10%: +10 % biochar at beginning of composting, BB5%&T5%: +5% biochar at beginning and + 5 % biochar after thermophilic stage of composting, BT10%: +10 % after thermophilic stage of composting. Results showed that treatment BB10%, BB5%&T5%, and BT10% reduced total N2O emissions by 55 %, 37 %, and 36 %, respectively. N2O emission was closely related to most physicochemical properties, while it was only related to amoA gene and hydroxylamine oxidoreductase. Different addition strategies of biochar changed the contributions of physicochemical properties, functional genes and enzymes to N2O emission. Organic matter and C/N contributed 23.7 % and 27.6 % of variations in functional gene abundances (P < 0.05), respectively. pH and C/N (P < 0.05) contributed 37.3 % and 17.3 % of variations in functional enzyme activities. These findings provided valuable insights into mitigating N2O emissions during composting.

Insight into N2O emission and denitrifier communities under different aeration intensities in composting of cattle manure from perspective of multi-factor interaction analysis

Nitrous oxide (N2O) emission from composting is a significant contributor to greenhouse effect and ozone depletion, which poses a threat to environment. To address the challenge of mitigating N2O emission during composting, this study investigated the response of N2O emission and denitrifier communities (detected by metagenome sequencing) to aeration intensities of 6 L/min (C6), 12 L/min (C12), and 18 L/min (C18) in cattle manure composting using multi-factor interaction analysis. Results showed that N2O emission occurred mainly at mesophilic phase. Cumulative N2O emission (QN2O, 9.79 mg·kg-1 DW) and total nitrogen loss (TN loss, 16.40 %) in C12 composting treatment were significantly lower than those in the other two treatments. The lower activity of denitrifying enzymes and the more complex and balanced network of denitrifiers and environmental factors might be responsible for the lower N2O emission. Denitrification was confirmed to be the major pathway for N2O production. Moisture content (MC) and Luteimonas were the key factors affecting N2O emission, and nosZ-carrying denitrifier played a significant role in reducing N2O emission. Although relative abundance of nirS was lower than that of nirK significantly (P < 0.05), nirS was the key gene influencing N2O emission. Community composition of denitrifier varied significantly with different aeration treatments (R2 = 0.931, P = 0.001), and Achromobacter was unique to C12 at mesophilic phase. Physicochemical factors had higher effect on QN2O, whereas denitrifying genes, enzymes and NOX- had lower effect on QN2O in C12. The complex relationship between N2O emission and the related factors could be explained by multi-factor interaction analysis more comprehensively. This study provided a novel understanding of mechanism of N2O emission regulated by aeration intensity in composting.

Ca(H2PO4)2 and MgSO4 activated nitrogen-related bacteria and genes in thermophilic stage of compost

This study was conducted to investigate the effects of Ca(H2PO4)2 and MgSO4 on the bacterial community and nitrogen metabolism genes in the aerobic composting of pig manure. The experimental treatments were set up as control (C), 1% Ca(H2PO4)2 + 2% MgSO4 (CaPM1), and 1.5% Ca(H2PO4)2 + 3% MgSO4 (CaPM2), which were used at the end of composting for potting trials. The results showed that Ca(H2PO4)2 and MgSO4 played an excellent role in retaining nitrogen and increasing the alkali-hydrolyzed nitrogen (AN), available phosphorus (AP), and available potassium (AK) contents of the composts. Adding Ca(H2PO4)2 and MgSO4 changed the microbial community structure of the compost. The microorganisms associated with nitrogen retention were activated. The complexity of the microbial network was enhanced. Genetic prediction analysis showed that the addition of Ca(H2PO4)2 and MgSO4 reduced the accumulation of nitroso-nitrogen and the process of denitrification. At the same time, despite the reduction of genes related to nitrogen fixation, the conversion of ammonia to nitrogenous organic compounds was promoted and the stability of nitrogen was increased. Mantel test analysis showed that Ca(H2PO4)2 and MgSO4 can affect nitrogen transformation-related bacteria and thus indirectly affect nitrogen metabolism genes by influencing the temperature, pH, and organic matter (OM) of the compost and also directly affected nitrogen metabolism genes through PO43- and Mg2+. The pot experiment showed that composting with 1.5% Ca(H2PO4)2 + 3% MgSO4 produced the compost product that improved the growth yield and nutrient content of cilantro and increased the fertility of the soil. In conclusion, Ca(H2PO4)2 and MgSO4 reduces the loss of nitrogen from compost, activates nitrogen-related bacteria and genes in the thermophilic phase of composting, and improves the fertilizer efficiency of compost products. KEY POINTS: • Ca(H2PO4)2 and MgSO4 reduced the nitrogen loss and improved the compost effect • Activated nitrogen-related bacteria and altered nitrogen metabolism genes • Improved the yield and quality of cilantro and fertility of soil.

Effects of microplastics on soil microorganisms and microbial functions in nutrients and carbon cycling - A review

The harmful effects of microplastics (MPs) pollution in the soil ecosystem have drawn global attention in recent years. This paper critically reviews the effects of MPs on soil microbial diversity and functions in relation to nutrients and carbon cycling. Reports suggested that both plastisphere (MP-microbe consortium) and MP-contaminated soils had distinct and lower microbial diversity than that of non-contaminated soils. Alteration in soil physicochemical properties and microbial interactions within the plastisphere facilitated the enrichment of plastic-degrading microorganisms, including those involved in carbon (C) and nutrient cycling. MPs conferred a significant increase in the relative abundance of soil nitrogen (N)-fixing and phosphorus (P)-solubilizing bacteria, while decreased the abundance of soil nitrifiers and ammonia oxidisers. Depending on soil types, MPs increased bioavailable N and P contents and nitrous oxide emission in some instances. Furthermore, MPs regulated soil microbial functional activities owing to the combined toxicity of organic and inorganic contaminants derived from MPs and contaminants frequently encountered in the soil environment. However, a thorough understanding of the interactions among soil microorganisms, MPs and other contaminants still needs to develop. Since currently available reports are mostly based on short-term laboratory experiments, field investigations are needed to assess the long-term impact of MPs (at environmentally relevant concentration) on soil microorganisms and their functions under different soil types and agro-climatic conditions.

Greenhouse gas emission characteristics and influencing factors of agricultural waste composting process: A review

China, being a major agricultural nation, employs aerobic composting as an efficient approach to handle agricultural solid waste. Nevertheless, the composting process is often accompanied by greenhouse gas emissions, which are known contributors to global warming. Therefore, it is urgent to control the formation and emission of greenhouse gases from composting. This study provides a comprehensive analysis of the mechanisms underlying the production of nitrous oxide, methane, and carbon dioxide during the composting process of agricultural wastes. Additionally, it proposes an overview of the variables that affect greenhouse gas emissions, including the types of agricultural wastes (straw, livestock manure), the specifications for compost (pile size, aeration). The key factors of greenhouse gas emissions during composting process like physicochemical parameters, additives, and specific composting techniques (reuse of mature compost products, ultra-high-temperature composting, and electric-field-assisted composting) are summarized. Finally, it suggests directions and perspectives for future research. This study establishes a theoretical foundation for achieving carbon neutrality and promoting environmentally-friendly composting practices.

Comparison analysis of microbial agent and different compost material on microbial community and nitrogen transformation genes dynamic changes during pig manure compost

This study aimed to assess the impact of microbial agent and different compost material, on physicochemical parameters dynamic change, nitrogen-transfer gene/bacterial community interaction network during the pig manure composting. Incorporating a microbial agent into rice straw-mushroom compost reduced the NH3 and total ammonia emissions by 25.52 % and 14.41 %, respectively. Notably, rice straw-mushroom with a microbial agent reduced the total ammonia emissions by 37.67 %. NH4+-N and pH emerged as primary factors of phylum-level and genus-level microorganisms. Microbial agent increased the expression of narG, nirK, and nosZ genes. Rice straw-mushroom elevated the content of amoA, nirK, nirS, and nosZ genes. Alcanivorax, Luteimonas, Pusillimonas, Lactobacillus, Aequorivita, Clostridium, Moheibacter and Truepera were identified as eight core microbial genera during the nitrogen conversion process. This study provides a strategy for reducing ammonia emissions and analyzes the potential mechanisms underlying compost processes.

Relationships between arsenic biotransformation genes, antibiotic resistance genes, and microbial function under different arsenic stresses during composting

Although the arsenic contamination and antibiotic resistance genes (ARGs) during composting have been studied separately, there is limited information on their interactions, particularly, the relationship between arsenic biotransformation genes (ABGs) and ARGs. Therefore, the present study used different forms of arsenic stress (organic and inorganic arsenic at 10 and 50 mg/kg) in pig manure and straw co-composting, to evaluate the effects of arsenic stress on microbial community structures, metabolic function, ABGs, and ARGs. The results showed that arsenic stress had different effects on different parameters and promoted the microbial formation of humic acid and the biodegradation of fulvic acid. Inorganic arsenic showed more rapid effects on microbial community structure, visible within about 20 days, while the effects of organic arsenic were later (about 45 days) due to the necessity of transformation. Moreover, the addition of organic roxarsone and inorganic arsenic resulted in higher expression of ABGs and ARGs, respectively. Arsenic addition also caused increased expression of genes associated with replication and repair. A significant relationship was observed between ABG and ARG expression, for instance, genes involved in arsenic reduction and oxidation were influenced by genes involved in aminoglycoside and chloramphenicol resistance genes (p < 0.05). These complex interactions among microorganisms, functional genes, and external parameters contribute to the understanding of the mechanisms underlying cross-contamination.

Vermicomposting technology - A perspective on vermicompost production technologies, limitations and prospects

The need for environmental sustainability while increasing the quantity, quality, and the rate of waste treatment to generate high-value environmental friendly fertilizer products is highly in demand. Vermicomposting is a good technology for the valorisation of industrial, domestic, municipal and agricultural wastes. Various vermicomposting technologies have been in use from time past to present. These technologies range from windrow, small - scale batch vermicomposting to large - scale continuous flow systems. Each of these processes has its own merits and demerits, necessitating advancement in the technology for efficient treatment of wastes. This work explores the hypothesis that the use of a continuous flow vermireactor system of a composite frame structure performs better than batch, windrow and other continuous systems operated in a single container. Following an in-depth review of the literature on vermicomposting technologies, treatment techniques, and reactor materials used, to explore the hypothesis, it was found that vermireactors operating in continuous flow fashion perform better in waste bioconversion than the batch and windrow techniques. Overall, the study concludes that batch techniques using plastic vermireactors predominate over the other reactor systems. However, the use of frame compartmentalized composite vermireactors performs considerably better in waste valorisation.

Incubation study on remediation of nitrate-contaminated soil by Chroococcus sp

The possibility of using the non-nitrogen-fixing cyanobacterium (Chroococcus sp.) for the reduction of soil nitrate contamination was tested through Petri dish experiments. The application of 0.03, 0.05 and 0.08 mg/cm2 Chroococcus sp. efficiently removed NO3--N from the soil through assimilation of nitrate nutrient and promotion of soil denitrification. At the optimal application dose of 0.05 mg/cm2, 44.06%, 36.89% and 36.17% of NO3--N were removed at initial NO3--N concentrations of 60, 90 and 120 mg/kg, respectively. The polysaccharides released by Chroococcus sp. acted as carbon sources for bacterial denitrification and facilitated the reduction of soil salinity, which significantly (p < 0.05) stimulated the growth of denitrifying bacteria (Hyphomicrobium denitrificans and Hyphomicrobium sp.) as well as significantly (p < 0.05) elevated the activities of nitrate reductase and nitrite reductase by 1.07-1.23 and 1.15-1.22 times, respectively. The application of Chroococcus sp. promoted the dominance of Nocardioides maradonensis in soil microbial community, which resulted in elevated phosphatase activity and increased available phosphorus content. The application of Chroococcus sp. positively regulated the growth of soil bacteria belonging to the genera Chitinophaga, Prevotella and Tumebacillus, which may contribute to increased soil fertility through the production of beneficial enzymes such as invertase, urease and catalase. To date, this is the first study verifying the remediation effect of non-nitrogen-fixing cyanobacteria on nitrate-contaminated soil.

Long-term effect of acetate and biochar addition on enrichment and activity of denitrifying anaerobic methane oxidation microbes

The denitrifying anaerobic methane oxidation (DAMO) process plays a crucial role in the global carbon/nitrogen cycles and methane emission control, and also has application potential in biological wastewater treatment. However, given that DAMO microbes are susceptible to external conditions such as additional carbon source in the system, it is essential to evaluate the effect of alternative carbon substance on the enrichment efficiency and metabolic activity of DAMO microbes. To this end, this study investigated the effect of acetate (0.1 mmol/L-R2, 0.5 mmol/L-R3) and biochar addition (R4) on the enrichment and activity of DAMO microbes. The long-term operation showed that the NO2--N and CH4 consumption rates in the reactors almost presented the sequence of R4>R2>R3>R1. However, the short-term activity test with isotope labelling showed the sequence of R2>R4>R1>R3. Furthermore, the addition of acetate and biochar improved the electrochemical activity and extracellular polymeric substance (EPS) secretion in the systems. In R4 reactor, the proportion of DAMO bacteria was the highest (7.20%), indicating that the addition of biochar could promote the enrichment of DAMO bacteria, and Thauera was co-enriched with the proportion increasing from 0.26% to 6.73%. While in R1, R2 and R3 reactors, DAMO bacteria were enriched with relatively low abundances (0.10%, 0.23%, 0.15%, respectively), together with methanogens and denitrifiers. This study showed that biochar and acetate with appropriate concentration could enhance the enrichment and activity of DAMO bacteria, the results can provide reference for the enrichment of DAMO microbes and its application in the biological nitrogen removal of wastewater.

Carbonate-bound Pb percentage distribution in agricultural soil and its toxicity: Impact on plant growth, nutrient cycling, soil enzymes, and functional genes

Metals pollution of lead in agricultural soils is a serious problem for food safety. Therefore, we investigated the toxic effects of carbonate-bound fraction Pb on agricultural soil from various aspects. The results revealed that a higher carbonate-bound fraction of Pb had more toxic effects on wheat growth, as evidenced by higher malondialdehyde (3.17 μmol g^-1 FW) and lower catalase levels (9.77 μg^-1 FW min^-1). In terms of nutrient cycling, soil nutrients including carbon, nitrogen, and phosphorus would slow down transformation rates in high concentrations. Compared to carbon, nitrogen and phosphorus were more likely to be affected by the initial carbonate-bound fraction at the earlier stage. Increased Pb dosage may reduce the soil enzymes activity such as urease (119-50 U g^-1) and phosphatase (3191-967 U g^-1), as well as the functional genes of nitrogen degradation related nirK, nisS, and carbon related pmoA. Correlation analysis and structural equation modeling indicated that carbonate bound Pb could regulate nutrients cycle via functional genes inhibition, soil enzyme activity reduction and wheat growth suppression in agricultural soil. Our findings will help with polluted agricultural soil monitoring and regulation through microbial activity to ensure food safety.

Using restored heavy metal contaminated soil as brick making material: Risk analysis upon different scenarios, considering the completeness of bricks

Restored heavy metal contaminated soil (RHMCS) can be utilized as building material, but the risks of heavy metal dissolution (HMD) under different scenarios are not clear. This study focused on sintered bricks made from RHMCS and assessed the HMD process and utilization risks of whole bricks (WB) and broken bricks (BB) under two simulated utilization scenarios of leaching and freeze-thaw. Part of the studied bricks were crushed, which increased the surface area (SSA) 3.43-fold and exposed the inner heavy metals, increasing the HMD in BB. However, the HMD in sintered bricks did not exceed the "Groundwater Quality Standard" and "Integrated Wastewater Discharge Standard" under different utilization scenarios, although the dissolution processes were different. In the leaching scenario, the release rate of HMs (As, Cr, Pb) changed from fast to slow over time; the maximum concentration was 17% of the standard limits. In the freeze-thaw scenario, there was no significant correlation between the release of HMs and freeze-thaw time, and the HMD of As was the highest, reaching 37% of the standard limits. Further analysis of health risks of bricks in the two scenarios found that the carcinogenic risks (CR) and the non-carcinogenic risks (NCR) were below 9.56 × 10^-7 and 3.21 × 10^-2, respectively, which are both lower than the Guidelines for Health Risk Assessment of Groundwater Pollution issued by Ministry of Ecology and Environment of China. These findings suggest that the utilization risks of RHMCS sintered bricks analyzed in this study are low in both scenarios, and higher completeness of bricks leads to higher safety in product utilization. The results provide a reference for the engineering utilization and disposal of building materials made from RHMCS.

Pretreatment and composting technology of agricultural organic waste for sustainable agricultural development

With the continuous development of agriculture, Agricultural organic waste (AOW) has become the most abundant renewable energy on earth, and it is a hot spot of research in recent years to realize the recycling of AOW to achieve sustainable development of agricultural production. However, lignocellulose, which is difficult to degrade in AOW, greenhouse gas emissions, and pile pathogenic fungi and insect eggs are the biggest obstacles to its return to land use. In response to the above problems researchers promote organic waste recycling by pretreating AOW, controlling composting conditions and adding other substances to achieve green return of AOW to the field and promote the development of agricultural production. This review summarizes the ways of organic waste treatment, factors affecting composting and problems in composting by researchers in recent years, with a view to providing research ideas for future related studies.

Response characteristics of denitrifying bacteria and denitrifying functional genes to woody peat during pig manure composting

This study aimed to explore the impacts of adding different proportions of woody peat (WP) (0%(CK), 5%(T1), and 15%(T2)) on denitrification during composting. The results demonstrated that compared with CK, T1 and T2 increased the total Kjeldahl nitrogen content (8% and 14%, respectively) and reduced the nitrate nitrogen (7% and 23%) content after composting. After composting, the abundances of nirK and nirS decreased by 4-9% and 33-35% under T1 and T2, respectively. Adding 15% WP reduced the abundances of key denitrifying bacteria such as Pseudomonas, Pusillimonas, Achromobacter, and Rhizobiales by 5-90%. The main factors that affected denitrification genes were the carbon content, nitrogen form (nitrite nitrogen and ammonium nitrogen), and denitrifying bacteria community. In summary, adding 15% WP has the best ability to reduce nitrogen loss by decreasing the abundances of denitrifying bacteria and denitrifying functional genes, thereby improving the agricultural value of composting products.

Key enzymes involved in anammox-based processes for wastewater treatment: An applied overview

The anaerobic ammonium oxidation (anammox) process has attracted significant attention as an economic, robustness, and sustainable method for the treatment of nitrogen (N)-rich wastewater. Anammox bacteria (AnAOB) coexist with other microorganisms, and particularly with ammonia-oxidizing bacteria (AOB) and/or heterotrophic bacteria (HB), in symbiosis in favor of the substrate requirement (ammonium and nitrite) of the AnAOB being supplied by these other organisms. The dynamics of these microbial communities have a significant effect on the N-removal performance, but the corresponding metabolic pathways are still not fully understood. These processes involve many common metabolites that may act as key factors to control the symbiotic interactions between these organisms, to maximize N-removal efficiency from wastewater. Therefore, this work overviews the current state of knowledge about the metabolism of these microorganisms including key enzymes and intermediate metabolites and summarizes already reported experiences based on the employment of certain metabolites for the improvement of N-removal using anammox-based processes. PRACTITIONER POINTS: Approaches knowledge about the biochemistry and metabolic pathways involved in anammox-based processes. Some molecular tools can be used to determine enzymatic activity, serving as an optimization in nitrogen removal processes. Enzymatic evaluation allied to the physical-chemical and biomolecular analysis of the nitrogen removal processes expands the application in different effluents.

The characteristics of alkaline phosphatase activity and phoD gene community in heavy-metal contaminated soil remediated by biochar and compost

This research was carried out to determine the influence of biochar and compost addition on the characteristics of potential alkaline phosphatase (ALP) activity and phoD gene community in heavy metal polluted soils. The ALP activity, the abundance and structure of phoD gene were systematically determined. Results showed that biochar and compost significantly changed soil properties, and promoted the microbial transformation of phosphorus. Compost addition significantly increased the ALP activity. Biochar and compost addition markedly increased the phoD gene abundance. The addition of biochar increased the proportion of Actinobacteria, Euryarchaeota, and Proteobacteria. By contrast, Betaproteobacteria, Deltaproteobacteria, and Gammaproteobacteria were the dominant taxa in soils with compost addition. Electrical conductivity critically controlled the expression of phoD and changed the structure of phoD-coding microbial communities in heavy-metal polluted soils that remediated by biochar and compost.

Effects of biochar and biogas residue amendments on N2O emission, enzyme activities and functional genes related with nitrification and denitrification during rice straw composting

This study was carried out to determine the response characteristics of N₂O emission, enzyme activities, and functional gene abundances involved in nitrification/denitirification process with biochar and biogas residue amendments during rice straw composting. The results revealed that N₂O release mainly occurred during the second fermentation phase. Biogas residue amendment promoted N₂O emission, while biochar addition decreased its emission by 33.6%. The nirK gene was abundant through composting process. Biogas residues increased the abundance of denitrification genes, resulting in further release of N₂O. Biochar enhanced nosZ gene abundance and accelerated the reduction of N₂O. Nitrate reductase (NR), nitrite reductase (NiR), N₂O reductase (N₂OR), and ammonia monooxygenase (AMO) activities were greatly stimulated by biochar or biogas residue rather than their combined addition. Pearson regression analysis indicated that N₂O emission negatively correlated with ammonium and positively correlated with nosZ, nirK, 18S rDNA, total nitrogen, and nitrate (P < 0.05).

Mitigated Greenhouse Gas Emissions in Cropping Systems by Organic Fertilizer and Tillage Management

Cultivating ecological benefits in agricultural systems through greenhouse gas emission reduction will offer extra economic benefits for farmers. The reported studies confirmed that organic fertilizer application could promote soil carbon sequestration and mitigate greenhouse gas emissions under suitable tillage practices in a short period of time. Here, a field experiment was conducted using a two-factor randomized block design (organic fertilizers and tillage practices) with five treatments. The results showed that the application of microbial fertilizers conserved soil heat and moisture, thereby significantly reducing CO2 emissions (6.9–18.9%) and those of N2O and CH4 fluxes during corn seasons, compared with chemical fertilizer application. Although deep tillage increased total CO2 emissions by 4.9–37.7%, it had no significant effect on N2O and CH4 emissions. Application of microbial organic fertilizer increased corn yield by 21.5%, but it had little effect on the yield of wheat. Overall, application of microbial fertilizers significantly reduced soil GHG emission and concurrently increased yield under various tillage practices in a short space of time. With this, it was critical that microbial fertilizer be carefully studied for application in wheat–corn cropping systems.

Biochar as a potential strategy for remediation of contaminated mining soils: Mechanisms, applications, and future perspectives

Soil heavy metal contamination caused by mining activities is a global issue. These heavy metals can be enriched in plants and animals through the food chain, and eventually transferred to the human system and threatening public health. Biochar, as an environmentally friendly soil remediation agent, can effectively immobilize heavy metals in soil. However, most researchers concern more about the remediation effect and mechanism of biochar for industrial and agricultural contaminated soil, while related reviews focusing on mining soil remediation are limited. Furthermore, the remediation effect of soil in mining areas is affected by many factors, such as physicochemical properties of biochar, pyrolysis conditions, soil conditions, mining environment and application method, which can lead to great differences in the remediation effect of biochar in diverse mining areas. Therefore, it is necessary to systematically unravel the relevant knowledge of biochar remediation, which can also provide a guide for future studies on biochar remediation of contaminated soils in mining areas. The present paper first reviews the negative effects of mining activities on soil and the advantages of biochar relative to other remediation methods, followed by the mechanism and influencing factors of biochar on reducing heavy metal migration and bioavailability in mining soil were systematically summarized. Finally, the main research directions and development trends in the future are pointed out, and suggestions for future development are proposed.

Biochar produced from the straw of common crops simultaneously stabilizes soil organic matter and heavy metals

The simultaneous stabilization of heavy metals and organic matter in polluted soil has received little research attention. In this study, we studied the immobilization of Cu and Cd and the mineralization of organic matter in the acidic soil amended with biochar produced from rice, wheat, corn, and rape straws through incubation experiments. Compared with that in the control treatment, the availability of Cu and Cd in the biochar amended soils decreased by 17-31% and 3-17%, respectively. The cumulative amount of CO₂ released from each treatment in 60 days of incubation followed the order: control treatment (399 mg CO₂-C kg^-1) > rape straw biochar treatment (388 mg CO₂-C kg^-1) > rice straw biochar treatment (374 mg CO₂-C kg^-1) > corn straw biochar treatment (355 mg CO₂-C kg^-1) > wheat straw biochar treatment (288 mg CO₂-C kg^-1). The information implied that biochar produced from the straw of common crops can simultaneously stabilize both heavy metals and organic matter in the acidic soil. The transformation of Cu and Cd from acid soluble fraction to residual fraction was the potential mechanism of biochar in facilitating soil heavy metal immobilization. The significant decrease in soil β-glucosidase activity, which controlled the degradation of soil organic matter, was an important potential pathway of biochar in decreasing soil organic matter mineralization. A significant decrease in the content and a substantial increase in the structural complexity of soil dissolved organic matter could further the decrease of wheat straw biochar in soil organic matter mineralization. Thus, biochar produced from the straw of common crops is a promising amendment for simultaneously stabilizing both heavy metals and organic matter in the acidic soil.

Silicon fertilizers, humic acid and their impact on physicochemical properties, availability and distribution of heavy metals in soil and soil aggregates

It has been confirmed that silicon (Si) fertilizer and humic acid (HA) could effectively decrease the heavy metals in soil. Nonetheless, the impact of these additives on soil aggregate characteristics was ignored. Therefore, the effects of Si fertilizer, HA, and their combinations on the physicochemical characteristics, availability of heavy metals (Cu, Cd, Pb, Zn), and fraction changes in soils and soil aggregates were investigated in this research. The results showed that Si fertilizer and HA significantly modified soil properties such as soil pH, electrical conductivity total organic carbon, water-soluble organic carbon, and nitrate‑nitrogen. HA and Si-HA (SHA) supplementation significantly decreased the availability of Cu, Cd, Pd, and Zn. Besides, there was no significant difference in physicochemical properties between soil and soil aggregates. The availability of Cu, Cd, Pd, and Zn in soil aggregates could be significantly inhibited by the addition of HA and SHA, and the content in microaggregates was greater than that in macroaggregates. After the addition of the three additives, the main fractions of heavy metals in different particle sizes were changed and eventually transformed to the residue state. These results indicated that Si fertilizer, HA, and SHA were influential in physicochemical properties and metal availability in soil aggregates. Therefore, it is of great scientific significance to study the impact of heavy metal pollution on the ecological environment in different aggregates, which will provide reference data for future sustainable management of heavy-metal polluted soils.

Efficient nitrogen removal from stormwater runoff by bioretention system: The construction of plant carbon source-based heterotrophic and sulfur autotrophic denitrification process

The plant carbon source and sulfur were selected as the denitrification electron donors and filled in the internal water storage zone (IWSZ) of bioretention system to establish excellent mixotrophic denitrification system, which was beneficial to waste recycling and showed very high nitrate nitrogen removal efficiency (approximately 94%). The ammonia nitrogen, total nitrogen, and chemical oxygen demand removal efficiencies could reach 79.41%, 85.89%, and 74.07%, respectively. Mechanism study revealed the synergistic degradation effect was existed between acetic acid released from plant carbon source and the generated sulfate, which improved the S/CH₃COOH mediated nitrate nitrogen removal reactions. Autotrophic denitrification occurred mainly in the upper layer of IWSZ, and the dominant bacteria were Thiobacillus. While in the lower layer, the dominant bacteria were mainly related to organic matter utilization and heterotrophic denitrification. The abundance of narG, nirK, nirS, and nosZ functional genes in the upper layer was significantly higher than the lower layers.

Silicon-based additive on heavy metal remediation in soils: Toxicological effects, remediation techniques, and perspectives

Chemical fertilizer is gaining increasing attention and has been the center of much research which indicating complex beneficial and harmful effects. Chemical fertilizer might cause some environmental hazards to the biosphere, especially in the agricultural ecosystem. The application of silicon (Si) fertilizer in agriculture has been proved to be able to create good economic and environmental benefits. Si is the second most abundant earth crust element. Si fertilizer improves soil quality and alleviates biotic and abiotic crop stress. It is of great significance to understand the function of Si fertilizer in agricultural utilization and environmental remediation. This paper reviews the Si-based fertilizer in farmland use and summarizes prior research relevant with characterization, soil quality improvement, and pollution remediation effects. Its use in agriculture enhances plant silicon uptake, mediates plant salt and drought stress and remediates heavy metals such as Al, As, Cd, Cu, Zn and Cr. This article also summarizes the detoxification mechanism of silicon and its effects on plant physiological activity such as photosynthesis and transpiration. Fertilizer materials and crop fertilizer management were also considered. Foliar spraying is an effective method to improve crop growth and yield and reduce biotic or abiotic stress. Silicon nanoparticle material provides potential with great potential and prospects. More investigation and research are prospected to better understand how silicon impacts the environment and whether it is a beneficial additive.

Combined addition of biochar and garbage enzyme improving the humification and succession of fungal community during sewage sludge composting

The influences of combination of garbage enzyme and biochar on total organic carbon (TOC) degradation, humification and the fungal succession during sewage sludge (SS) composting were established. Results showed that the GE and BC + GE treatments significantly increased the enzyme activity of fluorescein diacetate hydrolase (FDA) and increased the TOC degradation rate by 9.8% and 21.9% relative to control. The excitation-emission matrix (EEM) combined with the percentage fluorescence response (Pi, n) also proved that the combination of BC and GE promoted fulvic acid-like and humic-like substances production, and thus increased humification. Furthermore, the combination of BC and GE effectively decreased the relative abundance of Unclassified_k_Fugni, while increased the abundance of Ascomycota and Basidiomycota compared with control. The four genera, Pseudeurotium, Talaromyces, Trichoderma, and Penicillium, were the main fungi for the humification. Comparatively, the combined of BC and GE showed the optimal performance for TOC degradation and humification during SS composting.

Activities of functional enzymes involved in C, N, and P conversion and their stoichiometry during agricultural waste composting with biochar and biogas residue amendments

This experiment was carried out to explore the effects of biochar, biogas residue and their combination amendment on enzyme activities and their stoichiometry during agricultural waste composting. A comprehensive analysis of the variation in, and stoichiometric correlations between, β-glucosidase (BG), N-acetylglucosaminidase (NAG), leucine aminopeptidase (LAP), and alkaline phosphatase (AKP) were determined. The results showed that biochar, biogas residue, and their combined addition significantly increased those enzyme activities. The potential C:P and N:P acquisition activities represented by ln(BG): ln(AKP) and ln(LAP + NAG): ln(AKP), were significantly decreased with biogas residue addition. BG, NAG and LAP were significantly negatively correlated with temperature, organic matter and water-soluble carbon. Redundancy analysis also showed that moisture and water-soluble carbon were significantly related to the variations of enzyme activities. Biochar and biogas residue changed the characteristics of the composting substrate, thus affecting the activity and stoichiometry of functional enzymes involved in C, N and P cycling.

Influence of microbial inoculants on co-composting of lignocellulosic crop residues with farm animal manure: A review

The rapidly developing agro-industry generates huge amounts of lignocellulosic crop residues and animal manure worldwide. Although co-composting represents a promising and cost-effective method to treat various agricultural wastes simultaneously, poor composting efficiency prolongs total completion time and deteriorates the quality of the final product. However, supplementation of the feedstock with beneficial microorganisms can mitigate these negative effects by facilitating the decomposition of recalcitrant materials, enhancing microbial enzyme activity, and promoting maturation and humus formation during the composting process. Nevertheless, the influence of microbial inoculation may vary greatly depending on certain factors, such as start-up parameters, structure of the feedstock, time of inoculation, and composition of the microbial cultures used. The purpose of this contribution is to review recent developments in co-composting procedures involving different lignocellulosic crop residues and farm animal manure combined with microbial inoculation strategies. To evaluate the effectiveness of microbial additives, the results reported in a large number of peer-reviewed articles were compared in terms of composting process parameters (i.e., temperature, microbial activity, total organic carbon and nitrogen contents, decomposition rate of lignocellulose fractions, etc.) and compost characteristics (humification, C/N ratio, macronutrient content, and germination index). Most studies confirmed that the use of microbial amendments in the co-composting process is an efficient way to facilitate biodegradation and improve the sustainable management of agricultural wastes. Overall, this review paper provides insights into various inoculation techniques, identifies the limitations and current challenges of co-composting, especially with microbial inoculation, and recommends areas for further research in this field.

Recent Progress and Prospects in Catalytic Water Treatment

Presently, conventional technologies in water treatment are not efficient enough to completely mineralize refractory water contaminants. In this context, the implementation of catalytic processes could be an alternative. Despite the advantages provided in terms of kinetics of transformation, selectivity, and energy saving, numerous attempts have not yet led to implementation at an industrial scale. This review examines investigations at different scales for which controversies and limitations must be solved to bridge the gap between fundamentals and practical developments. Particular attention has been paid to the development of solar-driven catalytic technologies and some other emerging processes, such as microwave assisted catalysis, plasma-catalytic processes, or biocatalytic remediation, taking into account their specific advantages and the drawbacks. Challenges for which a better understanding related to the complexity of the systems and the coexistence of various solid-liquid-gas interfaces have been identified.

Patterns of heavy metal resistant bacterial community succession influenced by biochar amendment during poultry manure composting

The purpose of this study was to investigate the heavy metal resistant bacteria (HMRB) community succession and bacterial activity in poultry manure (PM) composting. Five different concentration of chicken manure biochar (CMB) at 0%, 2%, 4%, 6%, and 10% on a dry weight basis was applied with initial feedstock (poultry manure + wheat straw) and indicated with T1, T2, T3, T4, and T5. In addition, high-throughput sequencing, principal coordinate analysis, and correlation analysis were used to analyze the evolution of HMRB communities during composting. The study indicated that crucial phyla were Proteobacteria, Actinobacteria, Bacteroidetes, and Firmicutes. The bacterial diversity in the CMB amendment treatment was higher than in the control treatment, and T4 treatment has the highest among all CMB applied treatments. Moreover, results from CCA indicated that T4 and T5 treatments quickly enters the high-temperature period which is maintained for 5 days, and is significantly positively correlated with Proteobacteria, and Actinobacteria. These findings offer insight into potential strategies to understand the succession of HMRBs during PM reuse. Overall, the above results show the addition of 6% biochar (T4) was potentially beneficial to enrich the abundance of bacterial community to improve composting environment quality and composting efficiency. In addition, effective to immobilized the heavy metals and HMRB in the end product.

Cd immobilization and soil quality under Fe-modified biochar in weakly alkaline soil

Cost-effective and environment-friendly implementation techniques are critical to the success of remediation in large-scale cadmium (Cd) contaminated agricultural soil. Field experiments were conducted to investigate the effect of Fe-modified biochar on Cd bioavailability in soils and uptake by maize (Zea mays L.), soil aggregate distribution and stability, and microbial community composition in weakly alkaline Cd-contaminated soil. Results showed that Fe-modified biochar optimized the structure and stability of soil aggregates. Moreover, the content of soil organic carbon increased by 6.59%-20.36% when compared with the control groups. However, DTPA-Cd concentration under the treatment of Fe-modified biochar was suffered by 37.74%-41.65% reduction in contrast with CK, and the significant decrease (P < 0.05) was obtained at 0.5% Fe-modified biochar. Moreover, sequential extraction procedures showed that the acid soluble and reducible states of Cd was converted into oxidizable and residual form. The addition of Fe-modified biochar inhibited Cd accumulation in maize, being 41.31%-76.64% (Zhengdan 958), 38.19%-70.95% (Liyu 86) and 52.30%-59.95% (Sanbei 218) reduction, respectively, in contrast with CK. The activity of catalase, urease and alkaline phosphatase in soil increased gradually with the addition of Fe-modified biochar. The enhancement in the number of soil bacterial OTUs and the values of Shannon, Chao1, ACE index indicated that Fe-modified biochar promoted the richness and diversity of bacterial communities. Therefore, the improvements of soil environment and biological quality indicated that Fe-modified biochar should be an alternative agent on remediation of Cd-contaminated soils.

Dynamics of bacterial functional genes and community structures during rhizoremediation of diesel-contaminated compost-amended soil

The objective of this study was to characterize the effects of organic soil amendment (compost) on bacterial populations associated with petroleum hydrocarbon (PH) degradation and nitrous oxide (N₂O) dynamics via pot experiments. Soil was artificially contaminated with diesel oil at total petroleum hydrocarbon (TPH) concentration of 30,000 mg·kg-soil^-1 and compost was mixed with the contaminated soil at a 1:9 ratio (w/w). Maize seedlings were planted in each pot and a total of ten pots with two treatments (compost-amended and unamended) were prepared. The pot experiment was conducted for 85 days. The compost-amended soil had a significantly higher TPH removal efficiency (51.1%) than unamended soil (21.4%). Additionally, the relative abundance of the alkB gene, which is associated with PH degradation, was higher in the compost-amended soil than in the unamended soil. Similarly, cnorB and nosZ (which are associated with nitric oxide (NO) and N₂O reduction, respectively) were also highly upregulated in the compost-amended soil. Moreover, the compost-amended soil exhibited higher richness and evenness indices, indicating that bacterial diversity was higher in the amended soil than in the unamended soil. Therefore, our findings may contribute to the development of strategies to enhance remediation efficiency and greenhouse gas mitigation during the rhizoremediation of diesel-contaminated soils.

Characteristics and Influencing Factors of Microbial Community in Heavy Metal Contaminated Soil under Silicon Fertilizer and Biochar Remediation

Silicon fertilizer and biochar have been widely used to remediate soil contaminated by heavy metals. The effects and mechanism of silicon fertilizer and biochar addition on the heavy metal availability, soil biological properties, and microbial community characteristics need further study in soils contaminated by heavy metals. Therefore, this research determined how silicon fertilizer, biochar, and their combined using affected microbial communities related with nitrogen and phosphorus cycling. The abundance and composition of the microbial community were evaluated by quantitative PCR and phospholipid fatty acid analysis, respectively. Results showed that silicon fertilizer and biochar addition significantly changed soil properties, including pH, total organic carbon, ammonium, nitrate. The Cd and Zn speciation were significantly reduced by silicon fertilizer, biochar, and their integrated application. Microbial community abundance and structure were also significantly changed. Principal component analysis shows that the difference in soil microbial community structure is the most obvious under the combined addition of biochar, silicon fertilizer and biochar. In addition, the results of fluorescence quantitative PCR showed that with biological addition, the number of soil bacteria was significantly reduced. This study reveals the influence of silicon fertilizer and biochar on bacterial and fungal communities in heavy metal soils and the effect of soil heavy metal availability.

Bacterial response to soil property changes caused by wood ash from wildfire in forest soils around mining areas: Relevance of bacterial community composition, carbon and nitrogen cycling

The different physical-chemical properties of the black ash (200-500 °C) and white ash (>510 °C) generated by wildfire may result in varied impacts on soil biological and abiotic indicators. Many studies have highlighted the environmental impacts of wood ash application due to its complex mixture of beneficial and detrimental compounds. However, few studies have compared the effect of black ash and white ash on soil, especially for the heavy metal polluted soil. In this study, we used the comparative analysis of parallel microcosm experiments to study the impacts of white ash and black ash on bioavailable heavy metals and metabolic potentials of microbial community. The results indicated that both white ash and black ash increased the concentration of soil bioavailable As and Cr, while the increasing trend of bioavailable As could be limited by Ca in the treatment of white ash. The addition of black ash could enhance the abundance of genes related to the Calvin cycle (CBB). Different kinds of wood ash inputs into soils could cause the differences in the microbial taxa for carbon fixation, as indicated by the dominance of different taxa for carbon fixation in white ash versus black ash treatments. Additionally, both white ash and black ash impaired dissimilatory nitrate reduction to ammonium (DNRA), nitrate assimilation and nitrification, while white ash enhanced denitrification.

Potential of a novel modified gangue amendment to reduce cadmium uptake in lettuce (Lactuca sativa L.)

In this study, the modified gangue (GE) was prepared by calcination at lower temperatures using potassium hydroxide (KOH) as the activating agent. The field emission scanning electron microscopy (SEM), energy-dispersive X-ray spectroscopy (EDS), Fourier transform infrared spectroscopy (FTIR), and X-ray fluorescence (XRF) methods were employed to analyze the physicochemical characteristics of GE before and after the modification. Besides, the GE and commercial zeolite (ZE) were compared in the remediation of Cd-contaminated soil in field experiments. The results showed that both the GE and ZE had positive effects on the stabilization of Cd, decreasing the available Cd by 21.2-33.9% and 22.1-28.2%, respectively, while no significant difference was observed between the two amendments, indicating that the modification of GE was successful. Moreover, the application of GE decreased the Cd mobilization and uptake in lettuce shoot and root by 54.9-61.5% and 9.3-13.2%, respectively, and at the same time, the bio-available Cd decreased by 20.9-34.5%. Moreover, with the addition of GE, activities of urease and alkaline phosphatase increased in soil, while the peroxidase and superoxide dismutase activities were notably reduced in plants. Therefore, GE could be used as an effective amendment for the alleviation of Cd accumulation and toxicity, and thereby improve food safety.

Interactive impacts of boron and organic amendments in plant-soil microbial relationships

Water shortage and low organic carbon content in soil limit soil fertility and crop productivity. The use of desalinated seawater is increasing as an alternative source of irrigation water. However, it has a high boron (B) content that could cause toxicity in the plant-soil microbial system. Here, we evaluated the responses of the soil microbiota and lemon trees to 3 irrigation B doses (0.3, 1, and 15 mg L^-1) under two types of soil management (conventional, CS; and organic, OS) in a 180-days pot experiment. High B doses promoted B accumulation in soil, reaching harmful concentrations that affected soil biodiversity. Our results suggest a close interaction between B and organic labile fractions that increased B availability in soil solution. Besides, B addition to soil impacted on microbial biomass. The bacterial community showed sensitivity to the B dose. Organic amendment did not increase B soil adsorption but it favored B plant uptake. The highest B dose had a detrimental impact on plant physiology, finally resulting lethal for the plants. Our study provides a comprehensive assessment of the microbes-plant interactions in soils irrigated with water with high B content. This will be fundamental in the design of future fertirrigation strategies.

Responses of ammonia-oxidizing microorganisms to biochar and compost amendments of heavy metals-polluted soil

Heavy metal pollution affects soil ecological function. Biochar and compost can effectively remediate heavy metals and increase soil nutrients. The effects and mechanisms of biochar and compost amendments on soil nitrogen cycle function in heavy-metal contaminated soils are not fully understood. This study examined how biochar, compost, and their integrated use affected ammonia-oxidizing microorganisms in heavy metal polluted soil. Quantitative PCR was used to determine the abundance of ammonia-oxidizing archaea (AOA) and bacteria (AOB). Ammonia monooxygenase (AMO) activity was evaluated by the enzyme-linked immunosorbent assay. Results showed that compost rather than biochar improved nitrogen conversion in soil. Biochar, compost, or their integrated application significantly reduced the effective Zn and Cd speciation. Adding compost obviously increased As and Cu effective speciation, bacterial 16S rRNA abundance, and AMO activity. AOB, stimulated by compost addition, was significantly more abundant than AOA throughout remediation. Correlation analysis showed that AOB abundance positively correlated with NO₃^--N (r = 0.830, P < 0.01), and that AMO activity had significant correlation with EC (r = -0.908, P < 0.01) and water-soluble carbon (r = -0.868, P < 0.01). Those seem to be the most vital factors affecting AOB community and their function in heavy metal-polluted soil remediated by biochar and compost.

Assessing the Influence of Compost and Biochar Amendments on the Mobility and Uptake of Heavy Metals by Green Leafy Vegetables

Municipal green-waste compost and wheat straw biochar amendments were assessed for their assistance in regulating the mobility of Cu, Pb, Zn, Cd, Cr and Ni and the uptake of these metals by five commonly grown green leafy vegetables (radish, lettuce, dill, spinach and parsley). The amendments were applied alone or combination of both in 5% and 10% (v/w) doses to soil contaminated with heavy metals. Vegetables were grown for eight weeks under greenhouse conditions, and in collected samples plant uptake and metal speciation in soil after sequential extraction procedure (BCR) were analyzed by Microwave Plasma Atomic Emission Spectrometer (MP-AES). The results of our study show that organic amendments noticeably reduced the uptake of heavy metals by various leafy vegetables, with the best result of reduced leaf accumulation for single biochar and biochar–compost mix application at higher dose. Single application of green-waste municipal compost may have adverse effects on heavy metal uptake, increasing the risk of vegetable contamination with Zn, Pb and Cr. This study recommends careful selection of vegetables for cultivation when organic fertilizers are applied to soil with elevated contents of trace elements or co-application of compost in mix with biochar to mitigate possible negative effects and human health risk.

Bacterial and Fungal Community Dynamics and Shaping Factors During Agricultural Waste Composting with Zeolite and Biochar Addition

Bacterial and fungal communities play significant roles in waste biodegradation and nutrient reservation during composting. Biochar and zeolite were widely reported to directly or indirectly promote microbial growth. Therefore, the effects of zeolite and biochar on the abundance and structure of bacterial and fungal communities and their shaping factors during the composting of agricultural waste were studied. Four treatments were carried out as follows: Run A as the control without any addition, Run B with zeolite (5%), Run C with biochar (5%), and Run D with zeolite (5%) and biochar (5%), respectively. The bacterial and fungal community structures were detected by high-throughput sequencing. Redundancy analysis was used for determining the relationship between community structure and physico-chemical parameters. The results indicated that the addition of biochar and zeolite changed the physico-chemical parameters (e.g., pile temperature, pH, total organic matter, ammonium, nitrate, and water-soluble carbon) during the composting process. Zeolite and biochar significantly changed the structure and diversity of bacterial and fungal populations. Moreover, the bacterial community rather than the fungal community was sensitive to the biochar and zeolite addition during the composting process. Community phylogenetic characteristics showed that Nocardiopsaceae, Bacillaceae, Leuconostocaceae, Phyllobacteriaceae, and Xanthomonadaceae were the predominant bacterial species at the family-level. Chaetomiaceae and Trichocomaceae were the two most dominant fungal species. The pH, total organic matter, and nitrate were the most important factors affecting the bacterial and fungal population changes during the composting process.