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For: Pham VH, Kim J. Cultivation of unculturable soil bacteria. Trends Biotechnol 2012;30:475-84. [PMID: 22770837 DOI: 10.1016/j.tibtech.2012.05.007] [Citation(s) in RCA: 256] [Impact Index Per Article: 19.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2012] [Revised: 05/29/2012] [Accepted: 05/31/2012] [Indexed: 11/24/2022]
Number Cited by Other Article(s)
1
Zeng X, Wei C, Li D, Cao W, Lin Q. Comparative Analysis of the Microbial Community Profiles of Sichuan and Guizhou Smoke-Cured Sausages Using a High-Throughput Sequencing Approach. Microorganisms 2025;13:1096. [PMID: 40431269 PMCID: PMC12113672 DOI: 10.3390/microorganisms13051096] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/09/2025] [Revised: 04/27/2025] [Accepted: 05/04/2025] [Indexed: 05/29/2025]  Open
2
Xie Y, Liu J, Ma J, Shi N, Zhang X. Excavation of resources of Streptomyces species in frozen soils of the Qinghai-Tibet Plateau based on RpfA protein of Streptomyces coelicolor. Front Microbiol 2025;16:1557511. [PMID: 40264977 PMCID: PMC12011840 DOI: 10.3389/fmicb.2025.1557511] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/09/2025] [Accepted: 03/21/2025] [Indexed: 04/24/2025]  Open
3
Dai J, Ouyang Y, Gupte R, Liu XJA, Li Y, Yang F, Chen S, Provin T, Van Schaik E, Samuel JE, Jayaraman A, Zhou A, de Figueiredo P, Zhou J, Han A. Microfluidic droplets with amended culture media cultivate a greater diversity of soil microorganisms. Appl Environ Microbiol 2025;91:e0179424. [PMID: 39936906 PMCID: PMC11921321 DOI: 10.1128/aem.01794-24] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/12/2024] [Accepted: 01/22/2025] [Indexed: 02/13/2025]  Open
4
Bartak D, Říha J, Dudáš D, Gallus P, Bedrníková E, Kašpar V, Černá K. Bentonite sterilization methods in relation to geological disposal of radioactive waste: comparative efficiency of dry heat and gamma radiation. J Appl Microbiol 2025;136:lxaf051. [PMID: 40042982 DOI: 10.1093/jambio/lxaf051] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2024] [Revised: 02/25/2025] [Accepted: 03/04/2025] [Indexed: 03/18/2025]
5
Yook G, Nam J, Jo Y, Yoon H, Yang D. Metabolic engineering approaches for the biosynthesis of antibiotics. Microb Cell Fact 2025;24:35. [PMID: 39891166 PMCID: PMC11786382 DOI: 10.1186/s12934-024-02628-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2024] [Accepted: 12/18/2024] [Indexed: 02/03/2025]  Open
6
Bodkhe R, Trang K, Hammond S, Jung DK, Shapira M. Emergence of dauer larvae in Caenorhabditis elegans disrupts continuity of host-microbiome interactions. FEMS Microbiol Ecol 2024;100:fiae149. [PMID: 39516048 PMCID: PMC11590253 DOI: 10.1093/femsec/fiae149] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2024] [Revised: 10/29/2024] [Accepted: 11/07/2024] [Indexed: 11/16/2024]  Open
7
Wang Y, Sun Y, Huang K, Gao Y, Lin Y, Yuan B, Wang X, Xu G, Nussio LG, Yang F, Ni K. Multi-omics analysis reveals the core microbiome and biomarker for nutrition degradation in alfalfa silage fermentation. mSystems 2024;9:e0068224. [PMID: 39440963 PMCID: PMC11575373 DOI: 10.1128/msystems.00682-24] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/16/2024] [Accepted: 09/17/2024] [Indexed: 10/25/2024]  Open
8
Trojacka E, Izdebska J, Szaflik J, Przybek-Skrzypecka J. The Ocular Microbiome: Micro-Steps Towards Macro-Shift in Targeted Treatment? A Comprehensive Review. Microorganisms 2024;12:2232. [PMID: 39597621 PMCID: PMC11596073 DOI: 10.3390/microorganisms12112232] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/24/2024] [Revised: 10/14/2024] [Accepted: 11/01/2024] [Indexed: 11/29/2024]  Open
9
Cao J, Shao B, Lin J, Liu J, Cui Y, Wang J, Fang J. Genomic and physiological properties of Anoxybacterium hadale gen. nov. sp. nov. reveal the important role of dissolved organic sulfur in microbial metabolism in hadal ecosystems. Front Microbiol 2024;15:1423245. [PMID: 39220043 PMCID: PMC11362086 DOI: 10.3389/fmicb.2024.1423245] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/25/2024] [Accepted: 08/05/2024] [Indexed: 09/04/2024]  Open
10
Yang QE, Zhou S, Walsh TR. Distribution of IncX3 plasmids in bacteria - Authors' reply. THE LANCET. MICROBE 2024;5:630. [PMID: 38527469 DOI: 10.1016/s2666-5247(24)00051-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/11/2024] [Accepted: 02/16/2024] [Indexed: 03/27/2024]
11
Nakai R, Kusada H, Sassa F, Makino A, Morigasaki S, Hayashi H, Takaya N, Tamaki H. Roseiterribacter gracilis gen. nov., sp. nov., a novel filterable alphaproteobacterium isolated from soil using a gel-filled microwell array device. PLoS One 2024;19:e0304366. [PMID: 38857291 PMCID: PMC11164329 DOI: 10.1371/journal.pone.0304366] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2023] [Accepted: 05/11/2024] [Indexed: 06/12/2024]  Open
12
Hsieh YE, Tandon K, Verbruggen H, Nikoloski Z. Comparative analysis of metabolic models of microbial communities reconstructed from automated tools and consensus approaches. NPJ Syst Biol Appl 2024;10:54. [PMID: 38783065 PMCID: PMC11116368 DOI: 10.1038/s41540-024-00384-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/06/2024] [Accepted: 05/13/2024] [Indexed: 05/25/2024]  Open
13
Hibbert T, Krpetic Z, Latimer J, Leighton H, McHugh R, Pottenger S, Wragg C, James CE. Antimicrobials: An update on new strategies to diversify treatment for bacterial infections. Adv Microb Physiol 2024;84:135-241. [PMID: 38821632 DOI: 10.1016/bs.ampbs.2023.12.002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/02/2024]
14
Sun S, Chen W, Peng K, Chen X, Chen J. Characterization of a novel amidohydrolase with promiscuous esterase activity from a soil metagenomic library and its application in degradation of amide herbicides. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2024;31:20970-20982. [PMID: 38383926 PMCID: PMC10948491 DOI: 10.1007/s11356-024-32362-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/04/2023] [Accepted: 02/03/2024] [Indexed: 02/23/2024]
15
Rossi F, Duchaine C, Tignat-Perrier R, Joly M, Larose C, Dommergue A, Turgeon N, Veillette M, Sellegri K, Baray JL, Amato P. Temporal variations of antimicrobial resistance genes in aerosols: A one-year monitoring at the puy de Dôme summit (Central France). THE SCIENCE OF THE TOTAL ENVIRONMENT 2024;912:169567. [PMID: 38145686 DOI: 10.1016/j.scitotenv.2023.169567] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/27/2023] [Revised: 12/18/2023] [Accepted: 12/19/2023] [Indexed: 12/27/2023]
16
Yang M, Liu N, Wang B, Li Y, Li W, Shi X, Yue X, Liu CQ. Stepwise degradation of organic matters driven by microbial interactions in China΄s coastal wetlands: Evidence from carbon isotope analysis. WATER RESEARCH 2024;250:121062. [PMID: 38157604 DOI: 10.1016/j.watres.2023.121062] [Citation(s) in RCA: 8] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/21/2023] [Revised: 12/05/2023] [Accepted: 12/22/2023] [Indexed: 01/03/2024]
17
Garuglieri E, Marasco R, Odobel C, Chandra V, Teillet T, Areias C, Sánchez-Román M, Vahrenkamp V, Daffonchio D. Searching for microbial contribution to micritization of shallow marine sediments. Environ Microbiol 2024;26:e16573. [PMID: 38217094 DOI: 10.1111/1462-2920.16573] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2023] [Accepted: 12/21/2023] [Indexed: 01/15/2024]
18
Gan D, Lin Z, Zeng L, Deng H, Walsh TR, Zhou S, Yang QE. Housefly gut microbiomes as a reservoir and facilitator for the spread of antibiotic resistance. THE ISME JOURNAL 2024;18:wrae128. [PMID: 39030691 PMCID: PMC11456846 DOI: 10.1093/ismejo/wrae128] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/24/2024] [Revised: 06/23/2024] [Accepted: 07/18/2024] [Indexed: 07/21/2024]
19
Lee SM, Thapa Magar R, Jung MK, Kong HG, Song JY, Kwon JH, Choi M, Lee HJ, Lee SY, Khan R, Kim JF, Lee SW. Rhizobacterial syntrophy between a helper and a beneficiary promotes tomato plant health. THE ISME JOURNAL 2024;18:wrae120. [PMID: 38952008 PMCID: PMC11253211 DOI: 10.1093/ismejo/wrae120] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/14/2024] [Revised: 06/17/2024] [Accepted: 06/28/2024] [Indexed: 07/03/2024]
20
Arora R, Babbar R, Dabra A, Chopra B, Deswal G, Grewal AS. Marine-derived Compounds: A Powerful Platform for the Treatment of Alzheimer's Disease. Cent Nerv Syst Agents Med Chem 2024;24:166-181. [PMID: 38305396 DOI: 10.2174/0118715249269050231129103002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/08/2023] [Revised: 09/18/2023] [Accepted: 10/31/2023] [Indexed: 02/03/2024]
21
Plessis C, Jeanne T, Dionne A, Vivancos J, Droit A, Hogue R. ASVmaker: A New Tool to Improve Taxonomic Identifications for Amplicon Sequencing Data. PLANTS (BASEL, SWITZERLAND) 2023;12:3678. [PMID: 37960035 PMCID: PMC10647208 DOI: 10.3390/plants12213678] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/22/2023] [Revised: 10/20/2023] [Accepted: 10/22/2023] [Indexed: 11/15/2023]
22
Enya K, Yamagishi A, Kobayashi K, Yoshimura Y, Tasker EJ. A Comparative Study of Methods for Detecting Extraterrestrial Life in Exploration Missions to Mars and the Solar System II: Targeted Characteristics, Detection Techniques, and Their Combination for Survey, Detection, and Analysis. ASTROBIOLOGY 2023;23:1099-1117. [PMID: 37768711 PMCID: PMC10616949 DOI: 10.1089/ast.2022.0148] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/26/2022] [Accepted: 08/15/2023] [Indexed: 09/29/2023]
23
Hanke W, Alenfelder J, Liu J, Gutbrod P, Kehraus S, Crüsemann M, Dörmann P, Kostenis E, Scholz M, König GM. The Bacterial Gq Signal Transduction Inhibitor FR900359 Impairs Soil-Associated Nematodes. J Chem Ecol 2023;49:549-569. [PMID: 37453001 PMCID: PMC10725363 DOI: 10.1007/s10886-023-01442-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/22/2023] [Revised: 06/19/2023] [Accepted: 06/20/2023] [Indexed: 07/18/2023]
24
Li S, Lian WH, Han JR, Ali M, Lin ZL, Liu YH, Li L, Zhang DY, Jiang XZ, Li WJ, Dong L. Capturing the microbial dark matter in desert soils using culturomics-based metagenomics and high-resolution analysis. NPJ Biofilms Microbiomes 2023;9:67. [PMID: 37736746 PMCID: PMC10516943 DOI: 10.1038/s41522-023-00439-8] [Citation(s) in RCA: 35] [Impact Index Per Article: 17.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/04/2023] [Accepted: 09/14/2023] [Indexed: 09/23/2023]  Open
25
Arikawa K, Hosokawa M. Uncultured prokaryotic genomes in the spotlight: An examination of publicly available data from metagenomics and single-cell genomics. Comput Struct Biotechnol J 2023;21:4508-4518. [PMID: 37771751 PMCID: PMC10523443 DOI: 10.1016/j.csbj.2023.09.010] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2023] [Revised: 09/10/2023] [Accepted: 09/10/2023] [Indexed: 09/30/2023]  Open
26
Dedysh SN. Describing difficult-to-culture bacteria: Taking a shortcut or investing time to discover something new? Syst Appl Microbiol 2023;46:126439. [PMID: 37413783 DOI: 10.1016/j.syapm.2023.126439] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2023] [Revised: 06/17/2023] [Accepted: 06/29/2023] [Indexed: 07/08/2023]
27
Wu L, Long H, Huang S, Niu X, Li S, Yu X, You L, Ran X, Wang J. Bacterial diversity in water from Xifeng Hot Spring in China. Braz J Microbiol 2023;54:1943-1954. [PMID: 37594656 PMCID: PMC10484846 DOI: 10.1007/s42770-023-01070-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2023] [Accepted: 07/15/2023] [Indexed: 08/19/2023]  Open
28
Hu G, Cao H, Ye C, Wang F. Effect of cadmium stress on the bacterial community in the rhizosphere of mulberry (Morus alba L.). Braz J Microbiol 2023;54:2297-2305. [PMID: 37594657 PMCID: PMC10484825 DOI: 10.1007/s42770-023-01090-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2022] [Accepted: 08/01/2023] [Indexed: 08/19/2023]  Open
29
Trinh NH, Kim J. Chitinophaga nivalis sp. nov., isolated from forest soil in Pyeongchang, Republic of Korea. Int J Syst Evol Microbiol 2023;73. [PMID: 37589171 DOI: 10.1099/ijsem.0.005981] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/18/2023]  Open
30
Seo EY, Jung D, Epstein SS, Zhang W, Owen JS, Baba H, Yamamoto A, Harada M, Nakashimada Y, Kato S, Aoi Y, He S. A targeted liquid cultivation method for previously uncultured non-colony forming microbes. Front Microbiol 2023;14:1194466. [PMID: 37362942 PMCID: PMC10288195 DOI: 10.3389/fmicb.2023.1194466] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/27/2023] [Accepted: 05/10/2023] [Indexed: 06/28/2023]  Open
31
Schultz J, Modolon F, Peixoto RS, Rosado AS. Shedding light on the composition of extreme microbial dark matter: alternative approaches for culturing extremophiles. Front Microbiol 2023;14:1167718. [PMID: 37333658 PMCID: PMC10272570 DOI: 10.3389/fmicb.2023.1167718] [Citation(s) in RCA: 22] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2023] [Accepted: 05/09/2023] [Indexed: 06/20/2023]  Open
32
Hong S, Yuan X, Yang J, Yang Y, Jv H, Li R, Jia Z, Ruan Y. Selection of rhizosphere communities of diverse rotation crops reveals unique core microbiome associated with reduced banana Fusarium wilt disease. THE NEW PHYTOLOGIST 2023;238:2194-2209. [PMID: 36797661 DOI: 10.1111/nph.18816] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/10/2022] [Accepted: 02/10/2023] [Indexed: 05/04/2023]
33
Kimisto A, Muia AW, Ong'ondo GO, Ndung'u K. Molecular characterization of microorganisms with industrial potential for methane production in sludge from Kangemi sewage treatment plant, Nyeri county-Kenya. Heliyon 2023;9:e15715. [PMID: 37234610 PMCID: PMC10205513 DOI: 10.1016/j.heliyon.2023.e15715] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/05/2022] [Revised: 04/18/2023] [Accepted: 04/20/2023] [Indexed: 05/28/2023]  Open
34
Caro TA, McFarlin J, Jech S, Fierer N, Kopf S. Hydrogen stable isotope probing of lipids demonstrates slow rates of microbial growth in soil. Proc Natl Acad Sci U S A 2023;120:e2211625120. [PMID: 37036980 PMCID: PMC10120080 DOI: 10.1073/pnas.2211625120] [Citation(s) in RCA: 22] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2022] [Accepted: 03/06/2023] [Indexed: 04/12/2023]  Open
35
Yang R, Zhao L, Wang X, Kong W, Luan Y. Recent progress in aptamer and CRISPR-Cas12a based systems for non-nucleic target detection. Crit Rev Anal Chem 2023;54:2670-2687. [PMID: 37029907 DOI: 10.1080/10408347.2023.2197062] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/09/2023]
36
Peter VG, Morandi SC, Herzog EL, Zinkernagel MS, Zysset-Burri DC. Investigating the Ocular Surface Microbiome: What Can It Tell Us? Clin Ophthalmol 2023;17:259-271. [PMID: 36698849 PMCID: PMC9870096 DOI: 10.2147/opth.s359304] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2022] [Accepted: 01/10/2023] [Indexed: 01/20/2023]  Open
37
Feng Z, Liu X, Qin Y, Feng G, Zhou Y, Zhu H, Yao Q. Cooperation of arbuscular mycorrhizal fungi and bacteria to facilitate the host plant growth dependent on soil pH. Front Microbiol 2023;14:1116943. [PMID: 36891386 PMCID: PMC9986299 DOI: 10.3389/fmicb.2023.1116943] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/06/2022] [Accepted: 02/06/2023] [Indexed: 02/22/2023]  Open
38
Lyu D, Smith DL. The root signals in rhizospheric inter-organismal communications. FRONTIERS IN PLANT SCIENCE 2022;13:1064058. [PMID: 36618624 PMCID: PMC9811129 DOI: 10.3389/fpls.2022.1064058] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/07/2022] [Accepted: 12/06/2022] [Indexed: 06/17/2023]
39
Siles JA, Hendrickson AJ, Terry N. Coupling of metataxonomics and culturing improves bacterial diversity characterization and identifies a novel Rhizorhapis sp. with metal resistance potential in a multi-contaminated waste sediment. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2022;322:116132. [PMID: 36067666 DOI: 10.1016/j.jenvman.2022.116132] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/20/2022] [Revised: 08/26/2022] [Accepted: 08/26/2022] [Indexed: 06/15/2023]
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Sharma P, Bano A, Singh SP, Sharma S, Xia C, Nadda AK, Lam SS, Tong YW. Engineered microbes as effective tools for the remediation of polyaromatic aromatic hydrocarbons and heavy metals. CHEMOSPHERE 2022;306:135538. [PMID: 35792210 DOI: 10.1016/j.chemosphere.2022.135538] [Citation(s) in RCA: 20] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/22/2022] [Revised: 06/04/2022] [Accepted: 06/26/2022] [Indexed: 06/15/2023]
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Rodrigues CJC, de Carvalho CCCR. Marine Bioprospecting, Biocatalysis and Process Development. Microorganisms 2022;10:1965. [PMID: 36296241 PMCID: PMC9610463 DOI: 10.3390/microorganisms10101965] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2022] [Revised: 09/22/2022] [Accepted: 09/30/2022] [Indexed: 11/22/2022]  Open
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Schultz J, Modolon F, Rosado AS, Voolstra CR, Sweet M, Peixoto RS. Methods and Strategies to Uncover Coral-Associated Microbial Dark Matter. mSystems 2022;7:e0036722. [PMID: 35862824 PMCID: PMC9426423 DOI: 10.1128/msystems.00367-22] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]  Open
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Pope E, Cartmell C, Haltli B, Ahmadi A, Kerr RG. Microencapsulation and in situ incubation methodology for the cultivation of marine bacteria. Front Microbiol 2022;13:958660. [PMID: 36071955 PMCID: PMC9441948 DOI: 10.3389/fmicb.2022.958660] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2022] [Accepted: 08/05/2022] [Indexed: 11/28/2022]  Open
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Enya K, Yamagishi A, Kobayashi K, Yoshimura Y. Comparative study of methods for detecting extraterrestrial life in exploration mission of Mars and the solar system. LIFE SCIENCES IN SPACE RESEARCH 2022;34:53-67. [PMID: 35940690 DOI: 10.1016/j.lssr.2022.07.001] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/12/2022] [Revised: 06/16/2022] [Accepted: 07/07/2022] [Indexed: 06/15/2023]
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Qi YK, Tang X, Wei NN, Pang CJ, Du SS, Wang KW. Discovery, synthesis, and optimization of teixobactin, a novel antibiotic without detectable bacterial resistance. J Pept Sci 2022;28:e3428. [PMID: 35610021 DOI: 10.1002/psc.3428] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/25/2021] [Revised: 05/07/2022] [Accepted: 05/10/2022] [Indexed: 11/09/2022]
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Designing a Waste-Based Culture Medium for the Production of Plant Growth Promoting Microorganisms Based on Cladodes Juice from Opuntia ficus-indica Pruning. FERMENTATION-BASEL 2022. [DOI: 10.3390/fermentation8050225] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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Effects of Matrix Composition and Temperature on Viability and Metabolic Activity of Microencapsulated Marine Bacteria. Microorganisms 2022;10:microorganisms10050996. [PMID: 35630440 PMCID: PMC9146197 DOI: 10.3390/microorganisms10050996] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2022] [Revised: 04/26/2022] [Accepted: 05/05/2022] [Indexed: 11/17/2022]  Open
48
Liu Z, Wei Y, Li J, Ding GC. Integrating 16S rRNA amplicon metagenomics and selective culture for developing thermophilic bacterial inoculants to enhance manure composting. WASTE MANAGEMENT (NEW YORK, N.Y.) 2022;144:357-365. [PMID: 35436715 DOI: 10.1016/j.wasman.2022.04.013] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/16/2022] [Revised: 03/30/2022] [Accepted: 04/10/2022] [Indexed: 06/14/2023]
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Biodegradation of Methylene Blue Using a Novel Lignin Peroxidase Enzyme Producing Bacteria, Named Bacillus sp. React3, as a Promising Candidate for Dye-Contaminated Wastewater Treatment. FERMENTATION 2022. [DOI: 10.3390/fermentation8050190] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]  Open
50
Aptamer-based Cas14a1 biosensor for amplification-free live pathogenic detection. Biosens Bioelectron 2022;211:114282. [DOI: 10.1016/j.bios.2022.114282] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2021] [Revised: 03/22/2022] [Accepted: 04/10/2022] [Indexed: 01/04/2023]
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