Deeper insights into the effects of substrate to inoculum ratio selection on the relationship of kinetic parameters, microbial communities, and key metabolic pathways during the anaerobic digestion of food waste

Different pathways in promoting humic acid formation of multi-source biochar addition between fiber and livestock manure type solid waste composting

This study selected fruit wood biochar (FWB), walnut shell biochar (WSB) and corncob biochar (CB) to compare and explore the humic acid (HA) formation mechanism differences added to the Chinese herbal residue (CHR) and Sheep manure (SM) composting. The results showed that the addition of multi-source biochar could improve carbon stability. Organic matter (OM) loss rates of CK, FWB, WSB and CB during SM composting were 25.3 %, 22.8 %, 20.8 % and 25.3 %, respectively, and that of CK, FWB, WSB and CB during CHR composting were 62.2 %, 47.9 %, 41.0 % and 43.3 %. Meanwhile, biochar addition promoted the HA formation, especially WSB in SM and CB in CHR. Moreover, the prediction results of the random forest model indicated that biochar could enhance the metabolic activity of bacterial communities closely related to HA formation during SM and CHR composting due to its porous structure. Finally, the structural equation model verified that CB with larger total pore volume promoted the conversion of macromolecular OM in CHR to form HA by stimulating microbial activity, while WSB with stronger adsorption capacity formed HA by polymerizing mall molecular components solidified in SM. This study provided theoretical and technical support for biochar to promote humification during different types materials composting.

Microbial degradation and pollutant control in aerobic composting and anaerobic digestion of organic wastes: A review

Aerobic composting (AC) and anaerobic digestion (AD) are promising technologies for organic waste treatment, but their efficiency and safety are influenced by complex waste composition and persistent contaminants. This review identifies the advances in understanding microbial community dynamics, enzymatic degradation pathways, and the fate of contaminants during AC and AD processes. The findings indicate that substrate composition shapes dominant microbial populations and their degradative enzymes, with this correlation potentially useful for predicting functional microbial communities. Additionally, AC shows advantages in antibiotic elimination while AD excels in heavy metal immobilization, with both contributing to removing certain antibiotic resistance genes (ARGs). The strategic manipulation of environmental conditions, particularly temperature and oxygen levels, can drive microbial succession to optimize organic matter decomposition while minimizing ARG proliferation. Economic analyses reveal that AC offers lower operational costs and AD generates valuable by-products with potential energy recovery from organic waste. Case studies indicate that integrating both technologies can overcome individual limitations and enhance degradation efficiency compared to conventional single-technology approaches. This work proposes a comprehensive framework for developing coupled AC-AD systems to achieve more efficient and safer organic waste valorization than conventional single-technology approaches. This review has important implications for advancing sustainable waste management practices and mitigating the spread of antibiotic resistance in the environment.

Mechanistic elucidation of ultraviolet light and peracetic acid coupling-driven enhancements in short-chain fatty acid production from sludge: Reactive species-induced organic solubilization and microbial function regulation

This study investigates the potential of enhancing short-chain fatty acid (SCFA) production during anaerobic fermentation of waste activated sludge through ultraviolet (UV) and peracetic acid (PAA) treatment. Under optimal conditions (UV irradiation time = 60 min and PAA dosage = 0.03 g/g VSS (volatile suspended solids), UV/PAA pretreatment enhanced sludge solubility, improved the biodegradability of organic matter, and facilitated pollutant degradation. During anaerobic fermentation, UV/PAA treatment resulted in an 836 % increase in SCFA production and a 50 % higher acetic acid ratio compared to the control group. Mechanistic studies revealed that UV/PAA treatment promoted sludge decomposition and enhanced the biodegradability of dissolved organic matter by generating more reactive species (•OH, CH3C(O)O•, •O2-, and 1O2), thereby facilitating sludge hydrolysis and acidification. Additionally, UV/PAA treatment increased the abundance of hydrolytic and SCFA-producing bacteria while reducing the abundance of SCFA-consuming bacteria. Moreover, UV/PAA treatment stimulated the expression of key enzyme genes involved in organic matter hydrolysis and SCFA production, thereby promoting SCFA accumulation. Therefore, UV/PAA treatment is promising in sludge treatment and provides a new approach for resource recovery from sludge.

Enhancing methane production in two-phase anaerobic digestion of perishable organic waste: Mini-review on acidogenic fermentation pathways and regulatory strategies

Two-phase anaerobic digestion is a highly effective approach for efficient reduction and resource recovery of perishable organic waste. Within this technological framework, organic wastes undergo multiple metabolic pathways during the acidogenic phase, which is classified into ethanol, butyrate, propionate, lactate, and mixed acid fermentation depending on the acidification end products. The nature of these acidification products critically influences the performance of the subsequent methanogenic phase. Strategic regulation of operational parameters during the acidogenic phase fosters the enrichment of specific microbial communities and establishment of dominant consortia, which enable the production of the targeted acidification end-products. This review provides a comprehensive analysis of the metabolic characteristics and regulatory strategies associated with various acidogenic fermentation types and methanogenic properties of different acidification products. The findings presented here are crucial for enhancing the stability and methanogenic efficiency of anaerobic digestion systems that process perishable organic waste.

Clay mineral content modulates biogenic gas production in coal: divergent microbial responses in low- and medium-rank coals revealed by multi-omics

The influence of clay mineral content on biogenic gas production in coal seams remains insufficiently understood. This study systematically investigated the mechanisms by which clay minerals affect biogas production in low- and medium-rank coals by integrating simulated biogas production experiments with multidimensional analytical techniques, including infrared spectroscopy, X-ray diffraction, scanning electron microscopy, gas chromatography-mass spectrometry, fluorescence spectroscopy, and metagenomic analysis. The results demonstrated that in low-rank coal, increasing the clay content from 2.78 to 4.75 g per 20 g of coal reduced the biogas yield from 6.30 to 3.47 mL/g. Conversely, in medium-rank coal, increasing the clay content from 1.66 to 2.65 g per 20 g of coal enhanced the biogas yield from 3.45 to 5.28 mL/g. These contrasting outcomes are primarily attributed to the distinct mechanistic roles of clay minerals across coal ranks. In low-rank coal, the hydration-induced swelling of clay minerals intensified pore blockage, impeded gas diffusion, decreased the abundance of genes involved in propionate degradation, and suppressed microbial metabolic activity, ultimately limiting methane production. In contrast, in medium-rank coal, clay minerals facilitated the enrichment of key functional microbial taxa, such as Acetobacteroides and Methanoculleus, promoted the degradation of fatty acids, hydroxyls, and amines, and enhanced the activity of acidogenic and methanogenic pathways, thereby increasing methane yield. This study elucidates the microbial mechanisms underlying the regulatory role of clay minerals in biogas production, offering new theoretical insights into the origin of coalbed methane (CBM) and providing a scientific foundation for optimizing biogenic CBM recovery.

The Effects of Chemically Modified Biochar on Biomethane Production from Glucose and Sugar Beet Pulp

The research aimed to study the effects of straw-derived biochar and two types of chemically modified biochar on biomethane production from glucose as a model substrate and sugar beet pulp as a real substrate. The biochar chemical modification with H3PO4 acid and KOH base resulted in a change in biochar surface area properties and its functional group's abundance and a decrease in biochar mass yield production. The anaerobic digestion process was performed in batch reactors kept at 37 °C for 20 days. The substrate-to-inoculum ratio by volatile solids was 0.5, while the mass of added biochar corresponded to 16 g·L-1. The results showed that neither the addition of biochar nor the chemically modified biochar had any positive effects on biomethane production or its kinetics in the case of both substrates. The highest methane production was found in reactors without biochar added, respectively, 385 and 324 mL·gVS-1 for glucose and sugar beet pulp. It is hypothesized that the anaerobic digestion process was performed under optimal conditions, and therefore, biochar could not enhance methane production. Additionally, biochar may have adsorbed some volatile fatty acids, making them less available to anaerobic microorganisms.

Biochar@MIL-88A(Fe) accelerates direct interspecies electron transfer and hydrogen transfer in waste activated sludge anaerobic digestion: Exploring electron transfer and biomolecular mechanisms

Adding additives exogenously is an effective strategy to enhance methanogenic activity and improve AD stability. Corn straw-based biochar@MIL-88A(Fe) (BM) was synthesized herewith and used as an exogenous additive to boost methane (CH4) production. After adding BM at 250 mg/g WAS VS, the accumulative CH4 production and maximum CH4 yield increased by 1.2 and 1.9 times, respectively, with CH₄ comprising 88% of the biogas. BM accelerated electron transfer through its unsaturated sites and surface functional groups, while also enhancing metabolic functions for facilitating enzymatic activities and converting organic substrates. The abundance of syntrophic bacteria and methanogen were higher after BM addition. BM-mediated DIET and IHT pathways effectively oxidized propionate and butyrate, promoting methane generation. Higher expression of key genes involved in methane production correlated with shifts in microbial structure and increased CH4 yield after BM dosage. The invention of BM may provide more solutions for addressing low energy recovery during AD.

Recovery of ammonia nitrogen from simulated reject water by bipolar membrane electrodialysis

Ammonia monohydrate (NH3·H2O) is an important chemical widely used in industrial, agricultural, and pharmaceutical fields. Reject water is used as the raw material in self-built bipolar membrane electrodialysis (BMED) to produce NH3·H2O. The effects of electrode materials, membrane stack structure, and operating conditions (current density, initial concentrations of the reject water, and initial volume ratio) on the BMED process were investigated, and the economic costs were analyzed. The results showed that compared with graphite electrodes, ruthenium-iridium-titanium electrodes as electrode plates for BMED could increase current efficiency (25%) and reduce energy consumption (26%). Compared with two-compartment BMED, three-compartment BMED had a higher ammonia nitrogen conversion rate (86.6%) and lower energy consumption (3.5 kW· h/kg). Higher current density (15 mA/cm2) could achieve better current efficiency (79%). The BMED performances were improved when the initial NH 4 + concentrations of the reject water increased from 500 mg NH 4 + /L to 1000 mg NH 4 + /L, but the performance decreased as the concentration increased from 1000 mg NH 4 + /L to 1500 mg NH 4 + /L. High initial volume ratio of the salt compartment and product compartment was beneficial for reducing energy consumption. Under the optimal operating conditions, only 0.13 $/kg reject water was needed to eliminate the environmental impact of reject water accumulation. This work indicates that BMED can not only achieve desalination of reject water, but also generate products that alleviate the operational pressure of factories.

Dissolved organic matter characteristics linked to bacterial community succession and nitrogen removal performance in woodchip bioreactors

Woodchip bioreactors are an eco-friendly technology for removing nitrogen (N) pollution. However, there needs to be more clarity regarding the dissolved organic matter (DOM) characteristics and bacterial community succession mechanisms and their association with the N removal performance of bioreactors. The laboratory woodchip bioreactors were continuously operated for 360 days under three influent N level treatments, and the results showed that the average removal rate of TN was 45.80 g N/(m3·day) when the influent N level was 100 mg N/L, which was better than 10 mg N/L and 50 mg N/L. Dynamic succession of bacterial communities in response to influent N levels and DOM characteristics was an important driver of TN removal rates. Medium to high N levels enriched a copiotroph bacterial module (Module 1) detected by network analysis, including Phenylobacterium, Xanthobacteraceae, Burkholderiaceae, Pseudomonas, and Magnetospirillaceae, carrying N-cycle related genes for denitrification and ammonia assimilation by the rapid consumption of DOM. Such a process can increase carbon limitation to stimulate local organic carbon decomposition to enrich oligotrophs with fewer N-cycle potentials (Module 2). Together, this study reveals that the compositional change of DOM and bacterial community succession are closely related to N removal performance, providing an ecological basis for developing techniques for N-rich effluent treatment.

Key enzymatic activities and metabolic pathway dynamics in acidogenic fermentation of food waste: Impact of pH and organic loading rate

Acidogenic fermentation was an effective technology to recover volatile fatty acids (VFAs) ethanol and lactic acid from food wastes (FW) as bioresources. However, the impact of process controls on key functional enzymes and metabolic pathways has been inadequately understood. In this study, the metabolite distribution, key functional enzymes and metabolic pathways were completely elucidated using 16S rRNA gene high-throughput sequencing combined with PICRUSt2. Results demonstrated pH significantly affected fermentation types by influencing key enzyme activities, while organic loading rate (OLR) primarily affected the yield without altering metabolic pathway. The maximum VFAs production was achieved at pH 6.0 and OLR of 15.0 g-VS/L/d as a result of Glycolysis and Pyruvate Metabolism were enhanced. Meanwhile, butyric acid was always dominant product, attributed to the enhanced activity of butyryl-CoA dehydrogenasedue. Furthermore, Lactobacillus enrichment and lactate dehydrogenase upregulation promoted lactate-type fermentation under without pH control (3.8), resulting in an average yield of lactic acid was 7.84 g/L. When the pH was raised from 3.8 to 5.0,downregulation of lactate dehydrogenase and upregulation of acetate kinase shifted the fermentation to acetate-type. This study provides a deeper understanding of how does process controls influence the metabolic pathways and key functional enzymes.

Exploring interactive effects of environmental and microbial factors on food waste anaerobic digestion performance: Interpretable machine learning models

Biogas yield in anaerobic digestion (AD) involves continuous and complex biological reactions. The traditional linear models failed to quantitatively assess the interactive effects of these factors on AD performance. To further explore the internal relationship between target variables and AD performance, this study developed four machine learning models to predict biogas yield and consider the interaction among various factors. Results indicated that the highest prediction accuracy of AD performance was achieved by adding bacterial genera dataset with environmental factors. Random forest model exhibited the highest accuracy, with the testing coefficient of determination equal to 0.9879. Among two types of input features, the bacterial genera accounted for 89.9 % of the impact on biogas yield, followed by environmental factors. The results revealed Keratinibaculum and Acetomicrobium as critical bacteria. The volatile fatty acid controlled below 2000 mg/L and the improved stirring system in AD process were recommended to achieve maximum biogas yield.

Deciphering the mechanism of microbial metabolic function shift and dissolved organic matter variation in acidogenic fermentation of waste activated sludge induced by antiviral drugs

Antiviral drugs (ATVs), as emerging contaminants enriched in wastewater activated sludge (WAS) in wastewater treatment plants, affect subsequent treatment. ATVs have been shown to have negative influences on anaerobic digestion of WAS, but it is unclear how ATVs affect functional microbial metabolic activity and changes in intermediates. Thus, the effect of the anti-HIV drug ritonavir (RIT) on the period of anaerobic fermentation (AF) and the response of microbial community structure were examined in this study. Results indicated that the production of total volatile fatty acids (VFAs) decreased from 2010.21 mg/L to 372.03 mg/L under 125-1000 μg RIT/kg TSS treatment. Characterization of organic matters revealed that dissolved organic matter in the high-dose RIT groups was less biodegradable, with lower protein content and higher humus content. Mechanistic analyses indicated that RIT exposure reduced the abundance of hydrolyzers and inhibited carbohydrate metabolism, resulting in an increased humification index in the RIT groups. In addition, the expression of genes associated with the synthesis of VFAs was also significantly reduced in the RIT groups, leading to a decrease in both the amount and type of VFAs. This study provides a novel perspective on the effects of emerging contaminants on WAS treatment processes and pollution prevention.

In-depth exploration of microbial electrolysis cell coupled with anaerobic digestion (MEC-AD) for methanogenesis in treating protein wastewater at high organic loading rates

High concentrations of protein wastewater often reduce treatment efficiency due to ammonia inhibition and acid accumulation caused by its low carbon-to-nitrogen ratio (C/N) after digestion, as well as its complex structure. This study investigates the performance of a microbial electrolysis cell (MEC) driving a protein digestion system with gradually increasing organic loading rates (OLR) of bovine serum albumin, elucidating microbial changes and methanogenic metabolic pathways on bioelectrodes under high OLR "inhibited steady-state" (ISS) conditions. The results showed that the accumulation of ammonia nitrogen (AN) from protein hydrolysis under high OLR conditions disrupted microbial growth and caused cell death on the electrode surface, hindering the electron transfer rate. Toxic AN reduced protein hydrolysis, led to propionate accumulation, inhibiting the acetoclastic methanogenesis process and favoring the hydrogenotrophic pathway. As OLR increased from 6 to 11 gCOD/L, cumulative methane production increased significantly from 450.24 mL to 738.72 mL, while average methane yield and production rate decreased by 10.51% and 50.28%, from 375.20 mL/gCOD and 75.04 mL/(gCOD·d) to 335.78 mL/gCOD and 37.31 mL/(gCOD·d), respectively. Despite these declines, the system maintained an ISS. Moderate OLR increases can achieve an ISS, boosting protein waste treatment capacity, methane production, and net energy output (NEO), with an OLR of 6 gCOD/L being optimal for maximizing NEO per unit substrate. These findings provide theoretical insights into the methanogenesis pathway of high OLR proteins in MEC-AD systems and offer an effective method for treating high OLR protein wastewater in future practical applications.

Synchronous reinforcement azo dyes decolorization and anaerobic granular sludge stability by Fe, N co-modified biochar: Enhancement based on extracellular electron transfer

Anaerobic digestion (AD) treatment of azo dyes wastewater often suffers from low decolorization efficiency and poor stability of anaerobic granular sludge (AnGS). In this study, iron and nitrogen co-modified biochar (FNC) was synthesized based on the secondary calcination method, and the feasibility of this material for enhanced AD treatment of azo dye wastewater and its mechanism were investigated. FNC not only formed richer conducting functional groups, but also generated Fe2+/Fe3+ redox pairs. The decolorization efficiency of Congo red and AD properties (e.g., methane production) were enhanced by FNC. After adding FNC, the content of extracellular polymeric substances (EPS) and the ratio of proteins remained stable under the impact of Congo red, which greatly protected the internal microbial community. This was mainly contributed to the excellent electrochemical properties of FNC, which strengthened the microbial extracellular electron transfer and realized the coupled mechanism of action: On the one hand, an electron transfer bridge between decolorizing bacteria and dyes was constructed to achieve rapid decolorization of azo dyes and mitigate the impact on methanogenic bacteria; On the other hand, the stability of AnGS was enhanced based on enhanced extracellular polymeric substances secretion, microbial community and direct interspecies electron transfer (DIET) process. This study provides a new idea for enhanced AD treatment of azo dyes wastewater.

A novel strategy for enhancing high solid anaerobic digestion of fecal slag and food waste using percolate recirculation and dosage of nano zero-valent iron

To speed up reaching UN Sustainable Development Goal 6 for safe sanitation by 2030, integrating high-solid anaerobic digestion (HSAD) into decentralized systems could recycle fecal slag (FS) and food waste (FW), aiding a circular economy and toilet revolution. In this study, a percolate recirculation system and conductive material were used to improve mass transfer, stability, and enhance methane production in HSAD of FS and FW. This setup consists of a percolate tank and a digester tank, where nano-zero valent iron (nZVI) was dosed in the percolate tank (PnZVI in P) and the digester tank (PnZVI in D) and compared with a control with no additive (PControl). The highest cumulative methane yield of 519.43 mL/gVS was achieved in PnZVI in D, which was 4.52 and 3.59 times higher than that of PControl (144.59 mL/gVS) and PnZVI in P (114.96 mL/gVS). This finding demonstrates that the dosing strategy of PnZVI in D facilitated effective interaction among organic matter, microbial communities, and nZVI, resulting in organics removal efficiencies of 67.42 % (total solid) and 77.22 % (volatile solid). Moreover, microbial community analysis supported the efficacy of the PnZVI in D strategy, revealing the enrichment of Clostridium sensu stricto 1 (46.91 %), which potentially engaged in interspecies electron transport (Interspecies hydrogen transfer (IHT) and direct interspecies electron transfer (DIET)) with Methanobacterium (81.19 %) and Methanosarcina (17.11 %). These interactions contribute to enhanced methane yield and stability maintenance in the HSAD system with percolate recirculation. The findings of this study demonstrate that the implementation of HSAD of FS and FW, coupled with percolate recirculation and the addition of nZVI, holds promise for enabling sustainable sanitation practices in developing regions. Moreover, this approach not only facilitates resource recovery but also eliminates the requirement for water.

Non-antibiotic disinfectant synchronously interferes methane production and antibiotic resistance genes propagation during sludge anaerobic digestion: Activation of microbial adaptation and reconfiguration of bacteria-archaea synergies

Waste activated sludge (WAS) presents both resource recovery potential and pollution risks, making its efficient treatment challenging. Anaerobic digestion is broadly recognized as a green and sustainable approach to WAS treatment, whose efficiency is easily impacted by the exogeneous pollutants in WAS. However, the impact of polyhexamethylene guanidine (PHMG), as a widely-used non-antibiotic disinfectant, on WAS digestion under semi-continuous flow conditions remains unclear. In this study, CH4 production decreased from 16.1 mL/g volatile suspended solids (VSS) in the control to 13.2 mL/g VSS and 0.3 mL/g VSS under low and high PHMG exposure, respectively, while PHMG increased the number of antibiotic resistance gene (ARG) copies per bacterium by 4.6-12.7 %. Molecular docking analysis revealed that PHMG could spontaneously bind to and disintegrate WAS (binding energy:2.35 and -9.62 kcal/mol), increasing the likelihood of microbial exposure to PHMG. This led to an increase in bacterial abundance and a reduction in archaeal populations, resulting in bacterial dominance in ecological niches. The network topology index in PHMG-treated reactors was consistently lower than in the control, with a higher proportion of negatively correlated links, indicating a more antagonistic relationship between bacteria and archaea. Consequently, PHMG significantly interfered with key genes involved in CH4 biosynthesis (e.g., mch and mtd). Interestingly, methanogenic activity and archaeal chemotaxis (e.g., rfk and cheA) partially recovered under low PHMG exposure due to archaeal adaptation through quorum sensing and two-component systems. However, this adaptation process also contributed to the propagation of ARGs through horizontal gene transfer, facilitated by the enhancement of mobile genetic elements and ARGs hosts. These findings confirm the ecological risks of PHMG and highlight the need for effective WAS disposal strategies.

Improved anaerobic digestion of food waste under ammonia stress by side-stream hydrogen domestication

High ammonia concentration inhibits archaea's activity, causing the accumulation of H2 and acetate, which suppresses methane production in anaerobic digestion (AD). The study aimed to enhance microbial hydrogen metabolism through a side-stream hydrogen domestication (SHD) strategy, which involves applying hydrogen stimulation to a portion of the sludge separately. SHD maintained a stable methane yield of 407.5 mL/g VS at a high total ammonia nitrogen (TAN) concentration of 3.1 g/L. In contrast, the control group gradually decreased and stopped methane production at a TAN concentration of 2.3 g/L. Further analysis using enzyme activity assays, flow cytometry, and metagenomics explored the mechanisms underlying ammonia tolerance of SHD-treated group. SHD reshaped the microbial community, enriching homoacetogens and Methanosaeta-dominated methanogenic archaea. Key metabolic pathways including homoacetogenesis, butyrate degradation, propionate degradation, and methane production were enhanced. The activity of related enzymes also increased. Gene abundance in energy-generating pathways, such as glycolysis, was enhanced, ensuring adequate ATP production. Additionally, the high gene abundance of ion transport systems contributed to regulating proton imbalance and supplementing intracellular K+. This study provides important insights and practical guidance for developing novel techniques in the field of anaerobic digestion.

Thermophilic and mesophilic anaerobic digestion of soybean molasses: A performance vs. stability trade-off

One of the factors that has a direct impact on anaerobic digestion is the applied organic loading rate (OLRA). Increasing OLRA can boost methane production but can also cause process failure. As a result, establishing the appropriate OLRA for the procedure is critical. This study evaluated the effect of increasing the OLRA using soybean molasses in a thermophilic anaerobic reactor (R-Thermo), as well as the effect of feeding strategy and co-processing with okara. Furthermore, the performance versus stability trade-off between R-Thermo and mesophilic anaerobic digestion (R-Meso) was investigated. The increase of OLRA from 10 to 15 and 20 kg-COD/m³/d led to a decrease in COD removal efficiency (90, 86, and 75%), methane yield (12.0, 11.6, and 9.9 mol-CH4/kg-COD) and an increase in total volatile acids concentration (251, 456, and 1393 mg-HAc/L, respectively). At 15 kg-COD/m³/d, R-Meso performed similarly to R-Thermo, and at 20 kg-COD/m3/d, R-Meso outperformed (81% COD removal efficiency, 9.3 mol-CH4/kg-CODrem and 154.5 mol-CH4/m3/d). Temperature greatly influenced the distribution of metabolic pathways, as shown by thermodynamic and kinetic analyses, thus impacting bacterial diversity. At 55 °C, amongst the bacterial genera, Tepidiphilus stood out (>28.2%), followed by Acetomicrobium, Coprothermobacter and Candidatus_Caldatribacterium. The OLRA clearly impacted the archaeal community; Methanothermobacter (77.4%) was favored over Methanosarcina (14.8%). Under thermophilic temperature, it seems that syntrophic acetate oxidation (SAO) bacteria might have competed for substrate with acetoclastic methanogens, while in R-Meso microorganisms responsible for the initial steps of organic matter breakdown, such as members of the Firmicutes and Proteobacteria phyla (at least 67%), were dominant. In summary, R-Meso, characterized by a more uniform distribution of metabolic pathways, as well as a diverse and well-adapted microbial consortium, have exhibited enhanced stability and outperformed R-Thermo at high-loads.

The effect of Fenton sludge on anaerobic digestion of papermaking wastewater in an upflow anaerobic sludge blanket reactor

An upflow anaerobic sludge blanket (UASB) reactor was used to investigate the effect of adding Fenton sludge (FS) on the anaerobic digestion of actual papermaking wastewater. The results showed that a one-time addition of 10 g/L FS could sustainably promote the performance of UASB for more than 40 days. The organic matter removal efficiency increased by 15.56%, and the biogas production increased by 24.52%. The proportion of methane in biogas increased by 12.87%. Adding FS increased the capacitance values of sludge extracellular polymeric substances and the electron transfer system activity in reactor increased by 1.76 times. The dehydrogenase activity and coenzyme F420 of the sludge increased by 1.54 and 2.11 times, respectively. Adding FS enriched the iron-reducing bacteria (Thermodesulfobacteriota) and hydrolytic acid-producing bacteria (Chloroflexota and Synergistota), thereby promoting the hydrolysis and acidification process. Adding FS was beneficial to the enrichment of methanogen, especially Methanosaeta, significantly increasing the methane production.

The potential of insect frass for sustainable biogas and biomethane production: A review

Insect-based protein production has gained traction in recent years. This has led to the increasing production of frass, the residual substrate from insect farming. As a relatively new substrate with characteristics that are not widely known, its energetic potential still needs to be investigated. In this context, this literature review aims to evaluate the potential of frass as a feedstock for bioenergy production through anaerobic digestion. From the literature search, 11 studies were selected, and showed a wide range of biogas (44 m3/ton VS to 668 m3/ton VS) and methane (26 m3/ton VS to 502 m3/ton VS) production potentials from insect frass, mostly comparable with traditional biomasses of liquid and solid slurry. Results are influenced by factors such as substrate type, digestion conditions and presence of co-digestion substrates. The need of further investigation on the economic viability has been highlighted, with a focus on the possibility of upgrading biogas to vehicle-grade biomethane.

Evolution of quorum sensing process and their regulatory role on biochemical metabolism during the organic loading rate increase in dry anaerobic digestion

The organic loading rate (OLR) is a critical parameter affecting the stability of dry anaerobic digestion (AD) of kitchen waste (KW), and significantly impacting the variations in physicochemical parameters and microbial communities. However, the evolution of quorum sensing (QS) and their role on anaerobic biochemical metabolism during the increase in OLR in dry AD remain unknown. Therefore, this study systematically elucidated the matter through multi-omics analysis based on a pilot-scale dry AD of KW. The results demonstrated that fluctuations in the OLR significantly influenced the microbial QS in dry AD. When the OLR ≤4.0 g·VS/L·d, the system operated stably, and methane production increased. The enrichment of Proteobacteria was crucial for sustaining high levels of functional genes associated with various types of QS, including acyl-homoserine lactones (AI-1), autoinducer-2 (AI-2), autoinducer-3 (AI-3), and gamma-aminobutyric acid (GABA). This enabled cooperative communication among microbes under low OLR. Furthermore, most genes associated with these QS processes positively affected hydrolysis, acidogenesis, and methanogenesis. When the OLR increased to 6.0 g·VS/L·d, the fatty acids and hydrogen partial pressure increased significantly. The autoinducing peptides (AIP)-type became the predominant QS and was positively correlated with fatty acids abundance. Syntrophaceticus and Syntrophomonas may promote syntrophic oxidation of acetate at high OLR through AIP-type QS. These findings provided new insights into the QS processes of microbes during dry AD of KW and a theoretical foundation for optimizing biochemical metabolic processes in dry AD through QS.

Ionic liquid coupled plasma promotes acetic acid production during anaerobic fermentation of waste activated sludge: Breaking the restrictions of low bioavailable substrates and altering the metabolic activities of anaerobes

This study explored the potential application of plasma coupling ionic liquid on disintegration of waste activated sludge and enhanced production of short-chain fatty acids (SCFAs) in anaerobic fermentation. Under optimal conditions (dosage of ionic liquid [Emim]OTf = 0.1 g/g VSS (volatile suspended solids) and discharge power of dielectric barrier discharge plasma (DBD) = 75.2 W), the [Emim]OTf/DBD pretreatment increased SCFA production by 302 % and acetic acid ratio by 53 % compared to the control. Mechanistic investigations revealed that the [Emim]OTf/DBD combination motivated the generation of various reactive species (such as H2O2, O3, •OH, 1O2, ONOO-, and •O2-) and enhanced the utilization of physical energies (such as heat). The coupling effects of [Emim]OTf/DBD synergistically improved the disintegration of sludge and biodegradability of dissolved organic matter, promoting the sludge anaerobic fermentation process. Moreover, the [Emim]OTf/DBD pretreatment enriched hydrolysis and SCFAs-forming bacteria while inhibiting SCFAs-consuming bacteria. The net effect was pronounced expression of genes encoding key enzymes (such as alpha-glucosidase, endoglucanase, beta-glucosidase, l-lactate/D-lactate dehydrogenase, and butyrate kinase) involved in the SCFA-producing pathway, enhancing the production of SCFAs from sludge anaerobic fermentation. In addition, [Emim]OTf/DBD pretreatment facilitated sludge dewatering and heavy metal removal. Therefore, [Emim]OTf/DBD pretreatment is a promising approach to advancing sludge reduction, recyclability, and valuable resource recovery.

Utilization strategy for algal bloom waste through co-digestion with kitchen waste: Comprehensive kinetic and metagenomic analysis

Anaerobic co-digestion (AcoD) with kitchen waste (KW) is an alternative utilization strategy for algal bloom waste (AW). However, the kinetic characteristic and metabolic pathway during this process need to be explored further. This study conducted a comprehensive kinetic and metagenomic analysis for AcoD of AW and KW. A maximum co-digestion performance index (CPI) of 1.13 was achieved under the 12% AW addition. Co-digestion improved the total volatile fatty acids generation and the organic matter transformation efficiency. Kinetic analysis showed that the Superimposed model fit optimally (R2Adj = 0.9988-0.9995). The improvement of the kinetic process by co-digestion was mainly reflected in the increase of the methane production from slowly biodegradable components. Co-digestion enriched the cellulolytic bacterium Clostridium and the hydrogenotrophic methanogenic archaea Methanobacterium. Furthermore, for metagenome analysis, the abundance of key genes concerned in cellulose and lipid hydrolysis, pyruvate and methane metabolism were both increased in co-digestion process. This study provided a feasible process for the utilization of AW produced seasonally and a deeper understanding of the AcoD synergistic mechanism from kinetic and metagenomic perspectives.

Environmentally responsive changes in mucus indicators and microbiota of Chinese sturgeon Acipensersinensis

The impact of environmental factors on the health of the endangered Chinese sturgeon (Acipenser sinensis) and the potential hazards associated with sample collection for health monitoring pose urgent need to its conservation. In this study, Chinese sturgeons were selected from indoor and outdoor environments to evaluate metabolic and tissue damage indicators, along with a non-specific immune enzyme in fish mucus. Additionally, the microbiota of both water bodies and fish mucus were determined using 16S rRNA high-throughput sequencing. The correlation between the indicators and the microbiota was investigated, along with the measurement of multiple environmental factors. The results revealed significantly higher levels of two metabolic indicators, total protein (TP) and cortisol (COR) in indoor fish mucus compared to outdoor fish mucus (p < 0.05). The activities of acid phosphatase (ACP), alkaline phosphatase (ALP), creatine kinase (CK), alanine aminotransferase (ALT), aspartate aminotransferase (AST), and lactate dehydrogenase (LDH) were significantly higher in indoor fish, serving as indicators of tissue damage (p < 0.05). The activity of lysozyme (LZM) was significantly lower in indoor fish (p < 0.01). Biomarker analysis at the phylum and genus levels in outdoor samples revealed that microorganisms were primarily related to the catabolism of organic nutrients. In indoor environments, microorganisms displayed a broader spectrum of functions, including ecological niche establishment, host colonization, potential pathogenicity, and antagonism of pathogens. KEGG functional enrichment corroborated these findings. Dissolved oxygen (DO), electrical conductivity (EC), ammonia nitrogen (NH3-N), turbidity (TU), and chemical oxygen demand (COD) exerted effects on outdoor microbiota. Temperature (TEMP), nitrate (NO3-), total phosphorus (TP), and total nitrogen (TN) influenced indoor microbiota. Changes in mucus indicators, microbial structure, and function in both environments were highly correlated with these factors. Our study provides novel insights into the health impacts of different environments on Chinese sturgeon using a non-invasive method.

Different regulation strategies of anaerobic digestion by AC/CaO2 and Fe3O4/CaO2: Reactive oxygen species induction, methanogenic performance, and microbial response

This study examined the combination of activated carbon and magnetite with calcium peroxide in enhancing the anaerobic digestion (AD) performance of food waste (FW). The individual mechanisms of these two approaches were also clarified. The results indicated that AC/CaO2 achieved the highest specific methane yield of 434.4 mL/g VS, followed by Fe3O4/CaO2 (416.9 mL/g VS). Both were significantly higher than other groups (control, AC, Fe3O4, and CaO2 were 330.1, 341.4, 342.8, and 373.2 mL/g VS, respectively). Additionally, compared to Fe3O4/CaO2, AC/CaO2 further increased reactive oxygen species (ROS), thereby enhancing the hydrolytic acidification process. Simultaneously, the higher ROS levels of Fe3O4/CaO2 and AC/CaO2 promoted the formation of microbial aggregates and established a more robust enzymatic defense system and unique damage repair strategy. The research comparatively analyzed the synergistic mechanism of iron-based and carbon-based conductive materials with CaO2, providing new perspectives for optimizing the AD of FW.

Lactic acid production with two types of feedstocks from food waste: Effect of inoculum, temperature, micro-oxygen, and initial pH

Lactic acid (LA) is an important chemical with broad market applications. To optimize LA production, food waste has been explored as feedstock. Due to the wide variety of food waste types, most current research studies have obtained different conclusions. This study focuses on carbohydrate-rich fruit and vegetable waste (FVW) and lipid-rich kitchen waste (KW), and the effect of inoculum, temperature, micro-oxygen, and initial pH were compared. FVW has a greater potential for LA production than KW. As an inoculum, lactic acid bacteria (LAB) significantly increased the maximum LA concentration (27.6 g/L) by 50.8 % compared with anaerobic sludge (AS). FVW exhibited optimal LA production at 37 °C with micro-oxygen. Adjustment of initial pH from 4 to 8 alleviated the inhibitory effect of accumulated LA, resulting in a 46.2 % increase in maximum LA production in FVW. The expression of functional genes associated with metabolism, genetic information processing, and environmental information processing was higher at 37 °C compared to 50 °C.

Riboflavin modified carbon cloth enhances anaerobic digestion treating food waste in a pilot-scale system

Previous laboratory-scale studies have consistently shown that carbon-based conductive materials can notably improve the anaerobic digestion of food waste, typically employing reactors with regular capacity of 1-20 L. Furthermore, incorporating riboflavin-loaded conductive materials can further address the imbalance between fermentation and methanogenesis in anaerobic systems. However, there have been few reports on pilot-scale investigation. In this study, a 10 m2 of riboflavin modified carbon cloth was incorporated into a pilot-scale (2 m3) food waste anaerobic reactor to improve its treatment efficiency. The study found that the addition of riboflavin-loaded carbon cloth can increase the maximum organic loading rate (OLR) by 40% of the pilot-scale reactor, compared to the system using carbon cloth without riboflavin loading, while ensuring efficient operation of the reaction system, effectively alleviating system acidification, sustaining methanogen activity, and increasing daily methane production by 25%. Analysis of the microbial community structure revealed that riboflavin-loaded carbon cloth enriched the methanogenic archaea in the genera of Methanothrix and Methanobacterium, which are capable of extracellular direct interspecies electron transfer (DIET). And metabolic pathway analysis identified the methane production pathway, highly enriched on the reduction of acetic acid and CO2 at riboflavin-loaded carbon cloth sample. The expression levels of genes related to methane production via DIET pathway were also significantly upregulated. These results can provide important guidance for the practical application of food waste anaerobic digestion engineering.

Functional Redundant Microbiome Enhanced Anaerobic Digestion Efficiency under Ammonium Inhibition Conditions

Revealing the role of functional redundancy is of great importance considering its key role in maintaining the stability of microbial ecosystems in response to various disturbances. However, experimental evidence on this point is still lacking due to the difficulty in "manipulating" and depicting the degree of redundancy. In this study, manipulative experiments of functional redundancy were conducted by adopting the mixed inoculation strategy to evaluate its role in engineered anaerobic digestion systems under ammonium inhibition conditions. The results indicated that the functional redundancy gradient was successfully constructed and confirmed by evidence from pathway levels. All mixed inoculation groups exhibited higher methane production regardless of the ammonium level, indicating that functional redundancy is crucial in maintaining the system's efficiency. Further analysis of the metagenome-assembled genomes within different functional guilds revealed that the extent of redundancy decreased along the direction of the anaerobic digestion flow, and the role of functional redundancy appeared to be related to the stress level. The study also found that microbial diversity of key functional populations might play a more important role than their abundance on the system's performance under stress. The findings provide direct evidence and highlight the critical role of functional redundancy in enhancing the efficiency and stability of anaerobic digestion.

Deep eutectic solvents pretreatment enhances methane production from anaerobic digestion of waste activated sludge: Effectiveness evaluation and mechanism elucidation

Anaerobic digestion (AD) is a prevalent waste activated sludge (WAS) treatment, and optimizing methane production is a core focus of AD. Two DESs were developed in this study and significantly increased methane production, including choline chloride-urea (ChCl-Urea) 390% and chloride-ethylene glycol (ChCl-EG) 540%. Results showed that ChCl-Urea mainly disrupted extracellular polymeric substances (EPS) structures, aiding in initial sludge solubilization during pretreatment. ChCl-EG, instead, induced sludge self-driven organic solubilization and enhanced hydrolysis and acidification processes during AD process. Based on the extent to which the two DESs promoted AD for methane production, the AD process can be divided into stage Ⅰ and stage Ⅱ. In stage Ⅰ, ChCl-EG promoted methanogenesis more significantly, microbiological analysis showed both DESs enriched aceticlastic methanogens-Methanosarcina. Notably, ChCl-Urea particularly influenced polysaccharide-related metabolism, whereas ChCl-EG targeted protein-related metabolism. In stage Ⅱ, ChCl-Urea was more dominant than ChCl-EG, ChCl-Urea bolstered metabolism and ChCl-EG promoted genetic information processing in this stage. In essence, this study investigated the microbial mechanism of DES-enhanced sludge methanogenesis and provided a reference for future research.

Enhancement of electron transfer via magnetite in nitrite-dependent anaerobic methane oxidation system

Nitrite-dependent anaerobic methane oxidation (n-DAMO) is a novel denitrification process that simultaneously further removes and utilizes methane from anaerobic effluent from wastewater treatment plants. However, the metabolic activity of n-DAMO bacteria is relative low for practical application. In this study, conductive magnetite was added into lab-scale sequencing batch reactor inoculated with n-DAMO bacteria to study the influence on n-DAMO process. With magnetite amendment, the nitrogen removal rate could reach 34.9 mg N·L-1d-1, nearly 2.5 times more than that of control group. Magnetite significantly facilitated the interspecies electron transfer and built electrically connected community with high capacitance. Enzymatic activities of electron transport chain were significantly elevated. Functional gene expression and enzyme activities associated with nitrogen and methane metabolism had been highly up-regulated. These results not only propose a useful strategy in n-DAMO application but also provide insights into the stimulating mechanism of magnetite in n-DAMO process.

Current status and future developments of assessing microbiome composition and dynamics in anaerobic digestion systems using metagenomic approaches

The metagenomic approach stands as a powerful technique for examining the composition of microbial communities and their involvement in various anaerobic digestion (AD) systems. Understanding the structure, function, and dynamics of microbial communities becomes pivotal for optimizing the biogas process, enhancing its stability and improving overall performance. Currently, taxonomic profiling of biogas-producing communities relies mainly on high-throughput 16S rRNA sequencing, offering insights into the bacterial and archaeal structures of AD assemblages and their correlations with fed substrates and process parameters. To delve even deeper, shotgun and genome-centric metagenomic approaches are employed to recover individual genomes from the metagenome. This provides a nuanced understanding of collective functionalities, interspecies interactions, and microbial associations with abiotic factors. The application of OMICs in AD systems holds the potential to revolutionize the field, leading to more efficient and sustainable waste management practices particularly through the implementation of precision anaerobic digestion systems. As ongoing research in this area progresses, anticipations are high for further exciting developments in the future. This review serves to explore the current landscape of metagenomic analyses, with focus on advancing our comprehension and critically evaluating biases and recommendations in the analysis of microbial communities in anaerobic digesters. Its objective is to explore how contemporary metagenomic approaches can be effectively applied to enhance our understanding and contribute to the refinement of the AD process. This marks a substantial stride towards achieving a more comprehensive understanding of anaerobic digestion systems.

Evaluating the potential of different bioaugmented strains to enhance methane production during thermophilic anaerobic digestion of food waste

Bioaugmentation technology for improving the performance of thermophilic anaerobic digestion (TAD) of food waste (FW) treatment is gaining more attention. In this study, four thermophilic strains (Ureibacillus suwonensis E11, Clostridium thermopalmarium HK1, Bacillus thermoamylovorans Y25 and Caldibacillus thermoamylovorans QK5) were inoculated in the TAD of FW system, and the biochemical methane potential (BMP) batch study was conducted to assess the potential of different bioaugmented strains to enhance methane production. The results showed that the cumulative methane production in groups inoculated with E11, HK1, Y25 and QK5 improved by 2.05%, 14.54%, 19.79% and 9.17%, respectively, compared with the control group with no inoculation. Moreover, microbial community composition analysis indicated that the relative abundance of the main hydrolytic bacteria and/or methanogenic archaea was increased after bioaugmentation, and the four strains successfully became representative bacterial biomarkers in each group. The four strains enhanced methane production by strengthening starch, sucrose, galactose, pyruvate and methane metabolism functions. Further, the correlation networks demonstrated that the representative bacterial genera had positive correlations with the differential metabolic functions in each bioaugmentation group. This study provides new insights into the TAD of FW with bioaugmented strains.

Metagenomic insights into the mechanism for the rapid enrichment and high stability of Candidatus Brocadia facilitated by Fe(Ⅲ)

The rapid enrichment of anammox bacteria and its fragile resistance to adverse environment are the critical problems facing of anammox processes. As an abundant component in anammox bacteria, iron has been proved to promote the activity and growth of anammox bacteria in the mature anammox systems, but the functional and metabolic profiles in Fe(III) enhanced emerging anammox systems have not been evaluated. Results indicated that the relative abundance of functional genes involved in oxidative phosphorylation, nitrogen metabolism, cofactors synthesis, and extracellular polymers synthesis pathways was significantly promoted in the system added with 5 mg/L Fe(III) (R5). These enhanced pathways were crucial to energy generation, nitrogen removal, cell activity and proliferation, and microbial self-defense, thereby accelerating the enrichment of anammox bacteria Ca. Brocadia and facilitating their resistance to adverse environments. Microbial community analysis showed that the proportion of Ca. Brocadia in R5 also increased to 64.42 %. Hence, R5 could adapt rapidly to the increased nitrogen loading rate and increase the nitrogen removal rate by 108 % compared to the system without Fe(III) addition. However, the addition of 10 and 20 mg/L Fe(III) showed inhibitory effects on the growth and activity of anammox bacteria, which exhibited the lower relative abundance of Ca. Brocadia and unstable or even collapsed nitrogen removal performance. This study not only clarified the concentration range of Fe(III) that promoted and inhibited the enrichment of anammox bacteria, but also deepened our understanding of the functional and metabolic mechanisms underlying enhanced enrichment of anammox bacteria by Fe(III), providing a potential strategy to hasten the start-up of anammox from conventional activated sludge.

New insights into inhibition of high Fe(III) content on anaerobic digestion of waste-activated sludge

The impacts of the increased iron in the waste-activated sludge (WAS) on its anaerobic digestion were investigated. It was found that low Fe(III) content (< 750 mg/L) promoted WAS anaerobic digestion, while the continual increase of Fe(III) inhibited CH4 production and total chemical oxygen demand (TCOD) removal. As the Fe(III) content increased to 1470 mg/L, methane production has been slightly inhibited about 5 % compared with the group containing 35 mg/L Fe(III). Particularly, as Fe(III) concentration was up to 2900 mg/L, CH4 production, and TCOD removal decreased by 43.6 % and 37.5 %, respectively, compared with the group with 35 mg/L Fe(III). Furthermore, the percentage of CO2 of the group with 2900 mg/L Fe(III) decreased by 52.8 % compared with the group containing 35 mg/L Fe(III). It indicated that Fe(II) generated by the dissimilatory iron reduction might cause CO2 consumption, which was confirmed by X-ray diffraction that siderite (FeCO3) was generated in the group with 2900 mg/L Fe(III). Further study revealed that Fe(III) promoted the WAS solubilization and hydrolysis, but inhibited acidification and methane production. The methanogenesis test with H2/CO2 as a substrate showed that CO2 consumption weakened hydrogenotrophic methanogenesis and then increased H2 partial pressure, further causing VFA accumulation. Microbial community analysis indicated that the abundance of hydrogen-utilizing methanogens decreased with the high Fe(III) content. Our study suggested that the increase of Fe(III) in sludge might inhibit methanogenesis by consuming or precipitating CO2. To achieve maximum bioenergy conversion, the iron content should be controlled to lower than 750 mg/L. The study may provide new insights into the mechanistic understanding of the inhibition of high Fe(III) content on the anaerobic digestion of WAS.

The synergistic role of ozonation and hydrolysis acidification on the enhanced pre-treatment of high-strength refractory 2-butenal manufacture wastewater: Performance, metabolism, and mechanisms

Targeted removal of three key refractory toxic organic compounds (TOMs) in 2-butenal manufacturing wastewater (2-BMW) is critical for enhancing pre-treatment by hydrolysis acidification (HA). We investigated the pre-treatment of 2-BMW with HA, coupled with ozonation in this study. Our results indicated that the removal rate of these key TOMs and the detoxification rate reached almost 100% and 46.3%, respectively, by ozonation under only 0.099 mg O3/mg chemical oxygen demand (COD). The organic load rate (OLR) reached 10.25 ± 0.43 kg COD/m3·d, and the acidification degree (AD) and detoxification efficiency reached 56.0% and 98.3%, respectively, with enhancements of 35.1% and 55.2%, respectively, compared with HA alone. The removal rate of the three key TOMs was improved by > 75%. The degradation pathways of these key TOMs were ring cleavage and ester formation by ozonation, followed by fermentation and acid production by HA. Ultimately, the synergistic role of ozonation and HA was revealed. The preferential cleavage of these key TOMs by ozonation was achieved because of their high electron cloud density and multiple reaction sites, which generated more fermentation-friendly products. The fermentation and acid production reactions may be directly involved in these products. Functional bacteria and key metabolic pathways were also enhanced by ozonation.

Thermally enhanced solid-liquid separation process in food waste biorefinery: modelling the anaerobic digestion of solid residues

The biochemical valorization potential of food waste (FW) could be exploited by extracting decreasing added-value bio-based products and converting the final residues into energy. In this context, multi-purpose and versatile schemes integrating thermal and biochemical conversion processes will play a key role. An upstream thermal pretreatment + solid-liquid separation unit was here proposed to optimize the conversion of the liquid fraction of FW into valuable chemicals through semi-continuous fermentation process, and the conversion of the residual solid fraction into biomethane through anaerobic digestion. The solid residues obtained after thermal pretreatment presented a higher soluble COD fraction, which resulted in higher methane production with respect to the raw residues (0.33 vs. 0.29 Nm3CH4 kg-1VSfed) and higher risk of acidification and failure of methanogenesis when operating at lower HRT (20d). On the contrary, at HRT = 40 d, the pretreatment did not affect the methane conversion rates and both tests evidenced similar methane productions of 0.33 Nm3CH4 kg-1VSfed. In the reactor fed with pretreated residue, the association of hydrogenotrophic methanogens with syntrophic bacteria prevented the acidification of the system. Modelling proved the eligibility of the FW solid residues as substrates for anaerobic digestion, given their small inert fractions that ranged between 0% and 30% of the total COD content.

Staphylococcus inoculation enhances the sensorial attributes of Chinese bacon by coordinating the composition of flavor compounds through amino acid metabolism

In this study, we aimed to uncover the potential underlying mechanisms of the flavor modulation of Chinese bacon by Staphylococcus. To that end, taste-enhancing S. cohnii WX-M8 and S. saprophyticus MY-A10 screened from Chinese bacon were used to investigate the effects of their individual and mixed fermentations and their synergistic fermentation with Lactobacillus plantarum BL-1 on the sensorial attributes, physicochemical properties, microbial diversity, and volatile compounds (VOCs) of Chinese bacon. Our results revealed that S. cohnii WX-M8 and S. saprophyticus MY-A10 significantly increased a* (redness) and Aw and reduced thiobarbituric acid reactive substances (TBARS) when fermented in a mixture. Moreover, they promoted the formation of esters, aldehydes (especially straight-chain aldehydes), and phenolic compounds through pathways related to amino acid metabolism, enhancing sensorial attributes. While synergistic fermentation with L. plantarum BL-1 resulted in an improved a* (redness) of Chinese bacon, and the increased microbial metabolism of the carbohydrate and lipid metabolic pathways, the increase in TBARS and the higher content of acidic volatiles, led to a change in the composition of the flavor substances. The advantage of co-fermentation of Staphylococci in sensory attributes can be attributed to their capability to metabolize amino acids and associates. These findings provide insights into the role of Staphylococcus as a starter in regulating bacon flavor.

Microbiome-functionality in anaerobic digesters: A critical review

Microbially driven anaerobic digestion (AD) processes are of immense interest due to their role in the biovalorization of biowastes into renewable energy resources. The function-versatile microbiome, interspecies syntrophic interactions, and trophic-level metabolic pathways are important microbial components of AD. However, the lack of a comprehensive understanding of the process hampers efforts to improve AD efficiency. This study presents a holistic review of research on the microbial and metabolic "black box" of AD processes. Recent research on microbiology, functional traits, and metabolic pathways in AD, as well as the responses of functional microbiota and metabolic capabilities to optimization strategies are reviewed. The diverse ecophysiological traits and cooperation/competition interactions of the functional guilds and the biomanipulation of microbial ecology to generate valuable products other than methane during AD are outlined. The results show that AD communities prioritize cooperation to improve functional redundancy, and the dominance of specific microbes can be explained by thermodynamics, resource allocation models, and metabolic division of labor during cross-feeding. In addition, the multi-omics approaches used to decipher the ecological principles of AD consortia are summarized in detail. Lastly, future microbial research and engineering applications of AD are proposed. This review presents an in-depth understanding of microbiome-functionality mechanisms of AD and provides critical guidance for the directional and efficient bioconversion of biowastes into methane and other valuable products.

Effects of Fe-N co-modified biochar on methanogenesis performance, microbial community, and metabolic pathway during anaerobic co-digestion of alternanthera philoxeroides and cow manure

The performance of anaerobic digestion (AD) is susceptible to disturbances in feedstock degradation, intermediates accumulation, and methanogenic archaea activity. To improve the methanogenesis performance of the AD system, Fe-N co-modified biochar was prepared under different pyrolysis temperatures (300,500, and 700 °C). Meanwhile, pristine and Fe-modified biochar were also derived from alternanthera philoxeroides (AP). The aim was to compare the effects of Fe-N co-modification, Fe modification, and pristine biochar on the methanogenic performance and explicit the responding mechanism of the microbial community in anaerobic co-digestion (coAD) of AP and cow manure (CM). The highest cumulative methane production was obtained with the addition of Fe-N-BC500 (260.38 mL/gVS), which was 42.37 % higher than the control, while the acetic acid, propionic acid, and butyric acid concentration of Fe-N-BC were increased by 147.58 %, 44.25 %, and 194.06 % compared with the control, respectively. The co-modified biochar enhanced the abundance of Chloroflexi and Methanosarcina in the AD system. Metabolic pathway analysis revealed that the increased methane production was related to the formation and metabolism of volatile fatty acids and that Fe-N-BC500 enhanced the biosynthesis of coenzyme A and the cell activity of microorganisms, accelerating the degradation of propionic acid and enhancing the hydrogenotrophic methanogenesis pathway. Overall, Fe-N co-modified biochar was proved to be an effective promoter for accelerated methane production during AD.

Riboflavin-loaded carbon cloth aids the anaerobic digestion of cow dung by promoting direct interspecies electron transfer

Cow dung generates globally due to increased beef and milk consumption, but its treatment efficiency remains low. Previous studies have shown that riboflavin-loaded conductive materials can improve anaerobic digestion through enhance direct interspecies electron transfer (DIET). However, its effect on the practical anaerobic digestion of cow dung remained unclear. In this study, carbon cloth loaded with riboflavin (carbon cloth-riboflavin) was added into an anaerobic digester treating cow dung. The carbon cloth-riboflavin reactor showed a better performance than other two reactors. The metagenomic analysis revealed that Methanothrix on the surface of the carbon cloth predominantly utilized the CO2 reduction for methane production, further enhanced after riboflavin addition, while Methanothrix in bulk sludge were using the acetate decarboxylation pathway. Furthermore, the carbon cloth-riboflavin enriched various major methanogenic pathways and activated a large number of enzymes associated with DIET. Riboflavin's presence altered the microbial communities and the abundance of functional genes relate to DIET, ultimately leading to a better performance of anaerobic digestion for cow dung.

Effect of Caproicibacterium lactatifermentans inoculation on the microbial succession and flavor formation of pit mud used in Chinese Baijiu fermentation

Caproicibacterium lactatifermentans is a major caproate-producing bacterium in high-quality pit mud and has an impact on the synthesis of fatty acids during Baijiu fermentation. To develop an effective method for cultivating high-quality pit mud, we explored the role of Caproicibacterium lactatifermentans inoculation. The inoculation resulted in a high level of Caproicibacterium lactatifermentans (29.16%) and fortified pit mud produced abundant fatty acids and ethyl esters in short-term usage. Rare microbes, such as Hazenella coriacea, promoted the production of fatty acids. After long-term usage, changes in physicochemical properties led to a decrease in caproate-producing bacterium, namely Clostridium and Caproicibacterium, and an increase in microbes with limited fatty acid biosynthesis capability, including Proteiniphilum, Fastidiosipila, and Caldicoprobacter. These alterations ultimately led to a decrease in fatty acids and ethyl esters. In summary, Caproicibacterium lactatifermentans inoculation exhibited positive outcomes in obtaining high-quality pit mud. However, the maintenance of functional microbes necessitates further investigation.

Granular activated carbon enhances volatile fatty acid production in the anaerobic fermentation of garden wastes

Garden waste, one type of lignocellulosic biomass, holds significant potential for the production of volatile fatty acids (VFAs) through anaerobic fermentation. However, the hydrolysis efficiency of garden waste is limited by the inherent recalcitrance, which further influences VFA production. Granular activated carbon (GAC) could promote hydrolysis and acidogenesis efficiency during anaerobic fermentation. This study developed a strategy to use GAC to enhance the anaerobic fermentation of garden waste without any complex pretreatments and extra enzymes. The results showed that GAC addition could improve VFA production, especially acetate, and reach the maximum total VFA yield of 191.55 mg/g VSadded, which increased by 27.35% compared to the control group. The highest VFA/sCOD value of 70.01% was attained in the GAC-amended group, whereas the control group only reached 49.35%, indicating a better hydrolysis and acidogenesis capacity attributed to the addition of GAC. Microbial community results revealed that GAC addition promoted the enrichment of Caproiciproducens and Clostridium, which are crucial for anaerobic VFA production. In addition, only the GAC-amended group showed the presence of Sphaerochaeta and Oscillibacter genera, which are associated with electron transfer processes. Metagenomics analysis indicated that GAC addition improved the abundance of glycoside hydrolases (GHs) and key functional enzymes related to hydrolysis and acidogenesis. Furthermore, the assessment of major genera influencing functional genes in both groups indicated that Sphaerochaeta, Clostridium, and Caproicibacter were the primary contributors to upregulated genes. These findings underscored the significance of employing GAC to enhance the anaerobic fermentation of garden waste, offering a promising approach for sustainable biomass conversion and VFA production.

Contribution of the bacterial community of poorly fermented oat silage to biogas emissions on the Qinghai Tibetan Plateau

To better utilize poorly fermented oat silage on the Qinghai Tibetan Plateau, 239 samples of this biomass were collected from the plateau temperate zone (PTZ), plateau subboreal zone (PSBZ), and nonplateau climatic zone (NPCZ) in the region and analyzed for microbial community, chemical composition and in vitro gas production. Climatic factors affect the bacterial α-diversity and β-diversity of poorly fermented oat silage, which led to the NPCZ having the highest relative abundance of Lactiplantibacillus plantarum. Furthermore, the gas production analysis showed that the NPCZ had the highest maximum cumulative gas emissions of methane. Through structural equation modeling analysis, environmental factors (solar radiation) affected methane emissions via the regulation of lactate production by L. plantarum. The enrichment of L. plantarum contributes to lactic acid production and thereby enhances methane emission from poorly fermented oat silage. Notably, there are many lactic acid bacteria detrimental to methane production in the PTZ. This knowledge will be helpful in revealing the mechanisms of environmental factors and microbial relationships influencing the metabolic processes of methane production, thereby providing a reference for the clean utilization of other poorly fermented silage.

Synergistic effects and mechanisms of plasma coupled with peracetic acid in enhancing short-chain fatty acid production from sludge: Motivation of reactive species and metabolic tuning of microbial communities

Suitable waste activated sludge (WAS) pretreatments that boost short-chain fatty acid (SCFA) production from anaerobic fermentation are essential for carbon emission reduction and sludge resource utilization. This study established an efficient WAS pretreatment process combining atmospheric pressure plasma jet (APPJ) with peracetic acid (PAA). The maximum SCFA production (6.5-fold that of the control) largely increased under the optimal conditions (PAA dosage = 25 mg/g VSS (volatile suspended solids), energy consumption = 20.9 kWh/m3). APPJ/PAA pretreatment enhanced the production of multiple reactive species (including OH, CH3C(O)O, 1O2, ONOO-, O2-, and eaq-) and strengthened the effects of H2O2, heat, and light. This synergistically solubilized WAS and released organic substrates for SCFA-producing microbes. In addition, the enrichment of SCFA-producing bacteria and the decrease in SCFA-consuming bacteria favored SCFA accumulation. The key genes encoding for the main substrate metabolism and SCFA production in the metabolic pathway of fermentation were also enhanced.

Multi-omics analysis unravels effects of salt and oil on substance transformation, microbial community, and transcriptional activity in food waste anaerobic digestion

In this study, through quantitative detection of key substances and enzyme activities, an integrated analysis of 16S rRNA sequencing and metatranscriptomics revealed the mechanisms by which salt and oil influence the biotransformation process during anaerobic digestion (AD). The results demonstrated that a salt concentration of 6 g/L promoted lipid metabolism and hydrogenotrophic methanogenesis, while inhibiting the acetoclastic pathway. An oil concentration of 5 g/L facilitated the expression of key enzyme-encoding genes involved in β-oxidation of long-chain fatty acids, transcription, and acetoclastic methanogenesis. It also promoted the enrichment of syntrophic propionate/butyrate oxidation bacteria (Syntrophomonas and DMER64). Salt/oil co-addition enhanced the expression of genes related to glucose metabolism, amino acid metabolism, organic acid synthesis, and quorum sensing. Furthermore, salt/oil co-addition inhibited the secretion of key enzymes related to methanogens by impeding the transcription process. Collectively, these findings provide systematic insights into how salt and oil affect the biochemical metabolic mechanisms of AD.

Enhancement of methane production by electrohydrolysis pretreatment for anaerobic digestion of OFMSW

Hydrolysis is the most critical rate-limiting step in the anaerobic digestion (AD) process for most types of substrates. The organic fraction of municipal solid waste (OFMSW) is a rich source for the AD process because of its high degradability. In this study, electrohydrolysis pretreatment was investigated for the OFMSW to overcome the rate-limiting step of hydrolysis. Electrohydrolysis pretreatment was applied to the OFMSW for 30 and 60 min in a custom-made reactor. In the untreated, 30-min. Treated, and 60-min. Treated OFMSW methane production was observed as 225 ± 2 mL CH4/g VSadded, 231 ± 4 mL CH4/g VSadded, and 248 ± 7 mL CH4/g VSadded, respectively. By increasing the treatment time, the lag phase, during which hydrolysis occurs, was reduced by 40-43%. 3-10% more methane was produced by applying electrohydrolysis pretreatment. These results suggest that electrohydrolysis pretreatment is a promising method to improve the efficiency of AD for the OFMSW by reducing the time required for hydrolysis and increasing methane production. More investigation is required to better comprehend the effects of electrohydrolysis on the OFMSW.

Mechanistic insights into Fe3O4-modified biochar relieving inhibition from erythromycin on anaerobic digestion

Anaerobic digestion (AD) of antibiotic manufacturing wastewater to degrade residual antibiotics and produce mixture of combustible gases has been investigated actively in the past decades. However, detrimental effect of residual antibiotic to microbial activities is commonly faced in AD process, leading to the reduction of treatment efficiency and energy recovery. Herein, the present study systematically evaluated the detoxification effect and mechanism of Fe3O4-modified biochar in AD of erythromycin manufacturing wastewater. Results showed that Fe3O4-modified biochar had stimulatory effect on AD at 0.5 g/L erythromycin existence. A maximum methane yield of 327.7 ± 8.0 mL/g COD was achieved at 3.0 g/L Fe3O4-modified biochar, leading to the increase of 55.7% compared to control group. Mechanistic investigation demonstrated that different levels of Fe3O4-modified biochar could improve methane yield via different metabolic pathways involved in specific bacteria and archaea. Low levels of Fe3O4-modified biochar (i.e., 0.5-1.0 g/L) led to the enrichment of Methanothermobacter sp., strengthening the hydrogenotrophic pathway. On the contrary, high levels of Fe3O4-modified biochar (2.0-3.0 g/L) favored the proliferation of acetogens (e.g., Lentimicrobium sp.) and methanogen (Methanosarcina sp.) and their syntrophic relations played vital role on the simulated AD performance at erythromycin stress. Additionally, the addition of Fe3O4-modified biochar significantly decreased the abundance of representative antibiotic resistant genes (ARGs), benefiting the reduction of environmental risk. The results of this study verified that the application of Fe3O4-modified biochar could be an efficient approach to detoxify erythromycin on AD system, which brings high impacts and positive implications for biological antibiotic wastewater treatment.

Influence of Pre-Incubation of Inoculum with Biochar on Anaerobic Digestion Performance

The application of biochar as an additive to enhance the anaerobic digestion (AD) of biomass has been extensively studied from various perspectives. This study reported, for the first time, the influence of biochar incubation in the inoculum on the anaerobic fermentation of glucose in a batch-type reactor over 20 days. Three groups of inoculum with the same characteristics were pre-mixed once with biochar for different durations: 21 days (D21), 10 days (D10), and 0 days (D0). The BC was mixed in the inoculum at a concentration of 8.0 g/L. The proportion of the inoculum and substrate was adjusted to an inoculum-to-substrate ratio of 2.0 based on the volatile solids. The results of the experiment revealed that D21 had the highest cumulative methane yield, of 348.98 mL, compared to 322.66, 290.05, and 25.15 mL obtained from D10, D0, and the control, respectively. Three models-modified Gompertz, first-order, and Autoregressive Integrated Moving Average (ARIMA)-were used to interpret the biomethane production. All models showed promising fitting of the cumulative biomethane production, as indicated by high R2 and low RMSE values. Among these models, the ARIMA model exhibited the closest fit to the actual data. The biomethane production rate, derived from the modified Gompertz Model, increased as the incubation period increased, with D21 yielding the highest rate of 31.13 mL/gVS. This study suggests that the application of biochar in the anaerobic fermentation of glucose, particularly considering the short incubation period, holds significant potential for improving the overall performance of anaerobic digestion.

Achieving efficient methane production from protein-rich organic waste in anaerobic digestion: Using conductive materials or regulating inoculum-to-substrate ratios?

The contribution of inoculum-to-substrate ratios (ISRs) and conductive materials (CMs) on the productivity of anaerobic digestion (AD) remains unclear, particularly for protein-rich organic waste. This study investigated whether the addition of CMs, i.e., biochar and iron powder, can overcome the limitations imposed by varying ISRs for the AD of protein as the sole substrate. Results indicate the ISR plays a decisive role in hydrolysis, acidification, and methanogenesis for protein conversion, irrespective of CMs addition. Methane production increased stepwise as the ISR escalated to 3:1. The addition of CMs provided limited improvement, and iron powder even inhibited methanogenesis at a low ISR. Bacterial community variations were contingent on the ISR, while iron powder supplementation significantly elevates the proportion of hydrogenotrophic methanogen. This study demonstrates that the addition of CMs could affect methanogenic efficiency but can not overcome the limitation of ISRs for the AD of protein.

Acclimatizing waste activated sludge in a thermophilic anaerobic fixed-bed biofilm reactor to maximize biogas production for food waste treatment at high organic loading rates

Thermophilic anaerobic digestion (TAD) provides a promising solution for sustainable high-strength waste treatment due to its enhanced methane-rich biogas recovery. However, high organic loading rates (OLR) exceeding 3.0 kgCOD/m3/day and short hydraulic retention times (HRT) below 10 days pose challenges in waste-to-energy conversion during TAD, stemming from volatile fatty acids (VFAs) accumulation and methanogenesis failure. In this study, we implemented a stepwise strategy for acclimatizing waste activated sludge (WAS) in a thermophilic anaerobic fixed-bed biofilm reactor (TA-FBBR) to optimize methanogen populations, thereby enhancing waste-to-energy efficiencies under elevated OLRs in food waste treatment. Results showed that following stepwise acclimatization, the TA-FBBR achieved stable methane production of approximately 5.8 L/L-reactor/day at an ultrahigh OLR of ∼20 kgCOD/m3/day and ∼15 kgVS/m3/day at 6-day HRT in food waste treatment. The average methane yield reached 0.45 m3/kgCODremoval, attaining the theoretical production in TAD. Moreover, VFA concentrations were stabilized below 1000 mg/L at the ultrahigh OLR under 6-day HRT, while maintaining an acetate/propionate ratio of > 1.8 and a VFA/TAK ratio of < 0.3 serving as effective indicators of system stability and methane yield potential. The microbial community analysis revealed that the WAS acclimatization strategy fostered the microbial diversity and abundance of Methanothermobacter and Methanosarcina. Methanosarcina in the biofilm were observed to be twice as abundant as Methanothermobacter, indicating a potential preference for biofilm existence among methanogens. The findings demonstrated an effective strategy, specifically the stepwise acclimatization of WAS in a thermophilic fixed-bed biofilm reactor, to enhance the food waste treatment performance at high OLRs, contributing valuable mechanistic and technical insights for future sustainable high-strength waste management.