Photochemical and Nonphotochemical Transformations of Cysteine with Dissolved Organic Matter

A Novel Peptide Mapping Method Utilizing Cysteine as a Reducing Agent

PURPOSES

In the peptide mapping reduction process for monoclonal antibodies (mAbs) and other proteins, the conventional reducing reagents β-mercaptoethanol (β-ME) and dithiothreitol (DTT) pose challenges due to their strong odor and toxicity at high concentrations. Cysteine (Cys), an essential amino acid for new protein synthesis, is an overlooked, nontoxic, and odorless reducing agent. This study presents a novel peptide mapping method using Cys as the reducing agent.

METHODS

We explored the reducing effect of Cys at different concentrations and pH levels for peptide mapping analysis of a specific mAb (mAb-1), using DTT as a positive control. RP-HPLC analysis, including UV chromatogram comparison and overall similarity calculation, was conducted for comparison. LC-MS analysis was subsequently utilized to characterize the primary sequence of mAb-1. We also applied the method to other mAbs or proteins to demonstrate its wide applicability.

RESULTS

The UV chromatogram and overall similarity of Cys as a reducing agent at concentrations ranging from 10 to 40 mM and pH levels between 7.0 and 11.0 were consistent with those of the positive control. Reduced concentrations of Cys or lower pH levels compromised reducing efficacy. This novel reducing method proficiently characterized the primary sequence of mAb-1, achieving an overall sequence coverage of 97%. In the analysis of other mAbs or proteins, the peptide mapping results also showed high consistency.

CONCLUSIONS

Cys exhibits a reducing ability comparable to DTT and possesses the advantageous characteristics of being nontoxic and odorless, making it a potential alternative for disulfide bond reduction and peptide mapping analysis of proteins and mAbs.

Study on the new slow-release carbon source biochemistry and its improvement of SRB on the acid mine drainage treatment

The content of sulfate and heavy metals in acidic mine drainage (AMD) exceeds the standard severely, and the acidity is extremely high, causing serious harm to the environment. SRB can efficiently remove sulfates through its own metabolism. The treatment of AMD by SRB faces problems such as carbon source scarcity and heavy metal ion toxicity to SRB. In this study, corn cob and polycaprolactone were embedded to prepare a novel slow-release carbon source (PSCL), which simultaneously achieves carbon source supply and metal ion removal. Through adsorption isotherms, kinetics, thermodynamics studies, and various characterization analyses, it is known that PSCL removes Cu2+ and Zn2+ through ion exchange, physical and chemical adsorption, electrostatic attraction, and surface complexation. PSCL carbon release experiments and characterization results confirm that its surface carbon distribution is dense, the molecular weight of DOM in the leachate is small, the degree of humification is low, and it has a porous structure, making it a good carbon release material and biological attachment. The experimental results of PSCL enhanced SRB treatment of AMD showed that the removal rates of SO42-, Cu2+ and Zn2+ could be increased to 97.48%, 98.11% and 90.42%, respectively, with a effluent pH of 7.05, effectively improving the water quality of AMD. This study provides new materials and methods to address the limitations of SRB in treating actual AMD.

Abiotic Methane Production Driven by Ubiquitous Non-Fenton-Type Reactive Oxygen Species

Abiotic CH4 production driven by Fenton-type reactive oxygen species (ROS) has been confirmed to be an indispensable component of the atmospheric CH4 budget. While the chemical reactions independent of Fenton chemistry to ROS are ubiquitous in nature, it remains unknown whether the produced ROS can drive abiotic CH4 production. Here, we first demonstrated the abiotic CH4 production at the soil-water interface under illumination. Leveraging this finding, polymeric carbon nitrides (CNx) as a typical analogue of natural geobattery material and dimethyl sulfoxide (DMSO) as a natural methyl donor were used to unravel the underlying mechanisms. We revealed that the ROS, photocatalytically produced by CNx, can oxidize DMSO into CH4 with a high selectivity of 91.5 %. Such an abiotic CH4 production process was further expanded to various non-Fenton-type reaction systems, such as electrocatalysis, pyrocatalysis and sonocatalysis. This work provides insights into the geochemical cycle of abiotic CH4, and offers a new route to CH4 production via integrated energy development.

Wavelength-dependent direct and indirect photochemical transformations of organic pollutants

Sunlight-induced photochemical transformations greatly affect the persistence of organic pollutants in natural environment. Whereas sunlight intensity is well-known to affect pollutant phototransformation rates, the reliance of pollutant phototransformation kinetics on sunlight spectrum remains poorly understood, which may greatly vary under different spatial-temporal, water matrix, and climatic conditions. Here, we systematically assessed the wavelength-dependent direct and indirect phototransformations of 12 organic pollutants. Their phototransformation rates dramatically decreased with light wavelength increasing from 375 to 632 nm, with direct photolysis displaying higher wavelength-dependence than indirect photolysis. Remarkably, UV light dominated both direct (90.4-99.5 %) and indirect (64.6-98.7 %) photochemical transformations of all investigated organic pollutants, despite its minor portion in sunlight spectrum (e.g., 6.5 % on March 20 at the equator). Based on wavelength-dependent rate constant spectrum, the predicted phototransformation rate of chloramphenicol (4.5 ± 0.7 × 10-4 s-1) agreed well with the observed rate under outdoor sunlight irradiation (4.3 ± 0.0 × 10-4 s-1), and there is no significant difference between the predicted rate and the observed rate (p-value = 0.132). Moreover, rate constant and quantum yield coefficient (QYC) spectrum could be applied for facilely investigate the influence of spectral changes on the phototransformation of pollutants under varying spatial-temporal (e.g., season, latitude) and climatic conditions (e.g., cloud cover). Our study highlights the wavelength-dependence of both direct and indirect phototransformation of pollutants, and the UV part of natural sunlight plays a decisive role in the phototransformation of pollutants.

Antibiotics soil-solution chemistry: A review of environmental behavior and uptake and transformation by plants

The increased use of antibiotics by humans for various purposes has left the environment polluted. Antibiotic pollution remediation is challenging because antibiotics exist in trace amounts and only highly sensitive detection techniques could be used to quantify them. Nevertheless, their trace quantity is not a hindrance to their transfer along the food chain, causing sensitization and the development of antibiotic resistance. Despite an increase in the literature on antibiotic pollution and the development and transfer of antibiotic-resistant genes (ARGs), little attention has been given to the behavior of antibiotics at the soil-solution interface and how this affects antibiotic adsorption-desorption interactions and subsequent uptake and transformation by plants. Thus, this review critically examines the interactions and possible degradation mechanisms of antibiotics in soil and the link between antibiotic soil-solution chemistry and uptake by plants. Also, different factors influencing antibiotic mobility in soil and the transfer of ARGs from one organism to another were considered. The mechanistic and critical analyses revealed that: (a) the charge characteristics of antibiotics at the soil-root interface determine whether they are adsorbed to soil or taken up by plants; (b) antibiotics that avoid soil colloids and reach soil pore water can be absorbed by plant roots, but their translocation to the stem and leaves depends on the ionic state of the molecule; (c) few studies have explored how plants adapt to antibiotic pollution and the transformation of antibiotics in plants; and (d) the persistence of antibiotics in cropland soils can be influenced by the content of soil organic matter, coexisting ions, and fertilization practices. Future research should focus on the soil/solution-antibiotic-plant interactions to reveal detailed mechanisms of antibiotic transformation by plants and whether plant-transformed antibiotics could be of environmental risk.

Field Quantification of Hydroxyl Radicals by Flow-Injection Chemiluminescence Analysis with a Portable Device

Hydroxyl radical (•OH) is a powerful oxidant abundantly found in nature and plays a central role in numerous environmental processes. On-site detection of •OH is highly desirable for real-time assessments of •OH-centered processes and yet is restrained by a lack of an analysis system suitable for field applications. Here, we report the development of a flow-injection chemiluminescence analysis (FIA-CL) system for the continuous field detection of •OH. The system is based on the reaction of •OH with phthalhydrazide to generate 5-hydroxy-2,3-dihydro-1,4-phthalazinedione, which emits chemiluminescence (CL) when oxidatively activated by H2O2 and Cu3+. The FIA-CL system was successfully validated using the Fenton reaction as a standard •OH source. Unlike traditional absorbance- or fluorescence-based methods, CL detection could minimize interference from an environmental medium (e.g., organic matter), therefore attaining highly sensitive •OH detection (limits of detection and quantification = 0.035 and 0.12 nM, respectively). The broad applications of FIA-CL were illustrated for on-site 24 h detection of •OH produced from photochemical processes in lake water and air, where the temporal variations on •OH productions (1.0-12.2 nM in water and 1.5-37.1 × 107 cm-3 in air) agreed well with sunlight photon flux. Further, the FIA-CL system enabled field 24 h field analysis of •OH productions from the oxidation of reduced substances triggered by tidal fluctuations in coastal soils. The superior analytical capability of the FIA-CL system opens new opportunities for monitoring •OH dynamics under field conditions.

Effects of carbon-silicon structure on photochemical activity of biochars

Biochar has raised increasing concerns because of its great environmental impacts. It is known that the photocatalytic property of biochar is related to its carbon component and dissolved black carbon, but the effect of silicon component is ignored, and the effect of silicon and carbon phases was far less studied. This study systematically explored the photochemistry of silicon-rich and silicon-deficient biochar under light irradiation by using hexavalent chromium (Cr(VI)) and sulfadiazine as representative pollutants for photoreduction and photooxidation, respectively. It was found that biochar had photoreduction activity under the enhancement of electron donors, and 80.1% Cr(VI) can be removed by biochar with crystalline silicon and carbon (i.e., RH900) after 12 h irradiation. Meanwhile after low temperature pyrolysis, biochar with amorphous silicon and carbon (i.e., RH600) had great photooxidation capacity, and 71.90% organic pollutant was degraded within 24 h. The reaction was illustrated by transient photocurrent response, and hydroxyl radical generation measurement, and other tests. A new photochemical mechanism of the synergy between silicon and carbon model was proposed to elucidate the redox reactions of pollutants under the light. Graphitic carbon or crystalline silicon formed under high temperature played a role of valence band which was excited under light irradiation and the effect of electron donors to benefit photoreduction, while amorphous silicon formed under low temperature facilitated photooxidation process by increasing reactive oxygen species concentration. This study provided a gist for biochar production and application in the field of photocatalysis, and contributed to the broader understanding of biochar geochemical behavior in natural sunlit system.

Insights into the mechanisms of natural organic matter on the photodegradation of indomethacin under natural sunlight and simulated light irradiation

Indomethacin (INDO) is an antipyretic and analgesic pharmaceutical that has been widely detected in the aquatic environment. Photodegradation is an essential pathway for removal of INDO in sunlit surface water, however the effect of dissolved organic matter (DOM) on its photodegradation and the ecotoxicity of photodegradation products are largely unknown. In this study, the effect of DOM on the photodegradation of INDO under both natural and simulated light irradiation was studied. The results showed that indirect photolysis is the main photodegradation pathway of INDO in presence of DOM where 3DOM* plays the most important promoting role. Compared to commercial DOM (SRNOM and SRFA), DOM extracted from local-lake water (SLDOM) promoted the photodegradation to the highest extent. Although the steady-state concentrations of 3DOM* of SRNOM and SRFA were higher than SLDOM, their inhibition effect surpassed SLDOM namely higher light screening effect and phenolic antioxidant concentrations. The photodegradation pathway in pure water is different from that in DOM system where the decarboxylation of acetic acid chain and the oxidative fracture of indole ring are the main degradation pathways. Density Functional Theory (DFT) calculation further supports the proposed degradation pathways of INDO. ECOSAR calculation showed that the toxicity of INDO photodegradation products to aquatic organisms may maintain or even exceed its parent compound. Therefore, comprehensive understanding of the impact of DOM on the photodegradation of INDO is of crucial significance for evaluating its ecological risk in the natural environment.

Selective Photochemical Oxidation of Reduced Dissolved Organic Sulfur to Inorganic Sulfate

The chemical nature and stability of reduced dissolved organic sulfur (DOS_Red) have implications on the biogeochemical cycling of trace and major elements across fresh and marine aquatic environments, but the underlying processes governing DOS_Red stability remain obscure. Here, dissolved organic matter (DOM) was isolated from a sulfidic wetland, and laboratory experiments quantified dark and photochemical oxidation of DOS_Red using atomic-level measurement of sulfur X-ray absorption near-edge structure (XANES) spectroscopy. DOS_Red was completely resistant to oxidation by molecular oxygen in the dark and underwent rapid and quantitative oxidation to inorganic sulfate (SO₄^2-) in the presence of sunlight. The rate of DOS_Red oxidation to SO₄^2- greatly exceeded that of DOM photomineralization, resulting in a 50% loss of total DOS and 78% loss of DOS_Red over 192 h of irradiance. Sulfonates (DOS_SO3) and other minor oxidized DOS functionalities were not susceptible to photochemical oxidation. The observed susceptibility of DOS_Red to photodesulfurization, which has implications on carbon, sulfur, and mercury cycling, should be comprehensively evaluated across diverse aquatic environments of differing DOM composition.

Making waves: Opportunities and challenges of applying far-UVC radiation in controlling micropollutants in water

Concerns over human health risks associated with chemical contaminants (micropollutants) in drinking waters are rising due to the increased use of reclaimed water or water supplies impacted by upstream wastewater discharges. Ultraviolet (UV)-driven advanced oxidation processes (UV-AOPs) using radiation sources that emit at 254 nm have been developed as advanced treatments to degrade contaminants, while those UV-AOPs can be improved towards higher radical yields and lower byproduct formation. Several previous studies have suggested that Far-UVC radiation (200-230 nm) is a promising radiance source to drive UV-AOPs because the direct photolysis of micropollutants and production of reactive species from oxidant precursors can both be improved. In this study, we summarize from the literature the photodecay rate constants of five micropollutants by direct UV photolysis, which are higher at 222 than 254 nm. We experimentally determine the molar absorption coefficients at 222 and 254 nm of eight oxidants commonly used in water treatment and present the quantum yields of the oxidant photodecay. Our experimental results also show that the concentrations of HO^·, Cl^·, and ClO^· generated in the UV/chlorine AOP can be increased by 5.15-, 15.76-, and 2.86-fold, respectively, by switching the UV wavelength from 254 to 222 nm. We also point out the challenges of applying Far-UVC for micropollutant abatement in water treatment, including the strong light screening effect of matrix components (e.g., carbonate, nitrate, bromide, and dissolved organic matter), the formation of byproducts via new reaction pathways, and the needs to improve the energy efficiency of the Far-UVC radiation sources.

Mechanism and controlling factors on rapid methylmercury degradation by ligand-enhanced Fenton-like reaction at circumneutral pH

Methylmercury (MeHg), derived from industrial processes and microbial methylation, is still a worldwide environmental concern. A rapid and efficient strategy is necessary for MeHg degradation in waste and environmental waters. Here, we provide a new method with ligand-enhanced Fenton-like reaction to rapidly degrade MeHg under neutral pH. Three common chelating ligands were selected (nitriloacetic acid (NTA), citrate, and ethylenediaminetetraacetic disodium (EDTA)) to promote the Fenton-like reaction and degradation of MeHg. Results showed that MeHg can be rapidly degraded, with the following efficiency sequence: EDTA > NTA > citrate. Scavenger addition demonstrated that hydroxyl radical (^▪OH), superoxide radical (O₂^▪-), and ferryl (Fe^ⅣO²⁺) were involved in MeHg degradation, and their relative contributions highly depended on ligand type. Degradation product and total Hg analysis suggested that Hg(Ⅱ) and Hg⁰ were generated with the demethylation of MeHg. Further, environmental factors, including initial pH, organic complexation (natural organic matter and cysteine), and inorganic ions (chloride and bicarbonate) on MeHg degradation, were investigated in NTA-enhanced system. Finally, rapid MeHg degradation was validated for MeHg-spiked waste and environmental waters. This study provided a simple and efficient strategy for MeHg remediation in contaminated waters, which is also helpful for understanding its degradation in the natural environment.

The photoactivity of complexation of DOM and copper in aquatic system: Implication on the photodegradation of TBBPA

The photoactivity of dissolved organic matter (DOM) has a great impact on the photodegradation of organic pollutants in natural waters. In this study, the photodegradation of TBBPA was investigated under simulated sunlight irradiation in the presence of copper ion (Cu²⁺), dissolved organic matter (DOM) and Cu-DOM complexation (Cu-DOM) to illustrate the effect of Cu²⁺ on photoactivity of DOM. The rate of photodegradation of TBBPA in the presence of Cu-DOM complex was 3.2 times higher than that in pure water. The effects of Cu²⁺, DOM and Cu-DOM on the photodegradation of TBBPA were highly pH dependent and hydroxyl radical(·OH) responded for the acceleration effect. Spectral and radical experiments indicated that Cu²⁺ had high affinity to fluorescence components of DOM, and acted as both the cation bridge and electron shuttle, resulting the aggregation of DOM and increasing of steady-state concentration of ·OH (·OH_ss). Simultaneously, Cu²⁺ also inhibited intramolecular energy transfer leading to the decrease of steady-state concentration singlet oxygen (¹O_2ss) and triplet of DOM (³DOM^⁎_ss). The interaction between Cu²⁺ and DOM followed the order of conjugated carbonyl CO, COO^- or CO stretching in phenolic groups and carbohydrate or alcoholic CO groups. With these results, a comprehensive investigation on the photodegradation of TBBPA in the presence of Cu-DOM was conducted, and the effect of Cu²⁺ on the photoactivity of DOM was illustrated. These findings helped to understanding the potential mechanism of interaction among metal cation, DOM and organic pollutants in sunlit surface water, especially for the DOM-induced photodegradation of organic pollutants.

Biofilm-Colonized versus Virgin Black Microplastics to Accelerate the Photodegradation of Tetracycline in Aquatic Environments: Analysis of Underneath Mechanisms

Tire wear particles (TWPs) exposed to the aquatic environment are rapidly colonized by microorganisms and provide unique substrates for biofilm formation, which potentially serve as vectors for tetracycline (TC) to influence their behaviors and potential risks. To date, the photodegradation capacity of TWPs on contaminants due to biofilm formation has not been quantified. To accomplish this, we examined the ability of virgin TWPs (V-TWPs) and biofilm-developed TWPs (Bio-TWPs) to photodegrade TC when exposed to simulated sunlight irradiation. V-TWPs and Bio-TWPs accelerated the photodegradation of TC, with rates (k_obs) of 0.0232 ± 0.0014 and 0.0152 ± 0.0010 h^-1, respectively (k_obs increased by 2.5-3.7 times compared to that for only TC solution). An important factor of increased TC photodegradation behavior was identified and linked to the changed reactive oxygen species (ROS) of different TWPs. The V-TWPs were exposed to light for 48 h, resulting in more ROS for attacking TC, with hydroxyl radicals (^•OH) and superoxide anions (O₂^•-) playing a dominant role in TC photodegradation measured using scavenger/probe chemicals. This was primarily due to the greater photosensitization effects and higher electron-transfer capacity of V-TWPs in comparison to Bio-TWPs. In addition, this study first sheds light on the unique effect and intrinsic mechanism of the crucial role of Bio-TWPs in TC photodegradation, enhancing our holistic understanding of the environmental behavior of TWPs and the associated contaminants.

Photolysis of 3-Nitro-1,2,4-triazol-5-one: Mechanisms and Products

Insensitive munitions formulations that include 3-nitro-1,2,4-triazol-5-one (NTO) are replacing traditional explosive compounds. While these new formulations have superior safety characteristics, the compounds have greater environmental mobility, raising concern over potential contamination and cleanup of training and manufacturing facilities. Here, we examine the mechanisms and products of NTO photolysis in simulated sunlight to further inform NTO degradation in sunlit surface waters. We demonstrate that NTO produces singlet oxygen and that dissolved oxygen increases the NTO photolysis rate in deionized water. The rate of NTO photolysis is independent of concentration and decreases slightly in the presence of Suwannee River Natural Organic Matter. The apparent quantum yield of NTO generally decreases as pH increases, ranging from 2.0 × 10-5 at pH 12 to 1.3 × 10-3 at pH 2. Bimolecular reaction rate constants for NTO with singlet oxygen and hydroxyl radical were measured to be (1.95 ± 0.15) × 106 and (3.28 ± 0.23) × 1010 M-1 s-1, respectively. Major photolysis reaction products were ammonium, nitrite, and nitrate, with nitrite produced in nearly stoichiometric yield upon the reaction of NTO with singlet oxygen. Environmental half-lives are predicted to span from 1.1 to 5.7 days. Taken together, these data enhance our understanding of NTO photolysis under environmentally relevant conditions.

Reactions of nicotine and the hydroxyl radical in the environment: Theoretical insights into the mechanism, kinetics and products

Nicotine (NCT) is a prevalent and highly poisonous tobacco alkaloid found in wastewater discharge. Advanced oxidative processes (AOP) are radical interactions between harmful pollutants and ambient free radicals that, theoretically, result in less toxic compounds. For a better understanding of the chemical transformations and long-term environmental effects of toxic discharges, the study of these processes is crucial. Here, quantum chemical calculations are used to investigate the AOP of the NCT in aqueous and lipidic environments. It was found that NCT interacted with HO^• in polar and nonpolar media, with an overall rate constant k_overall = 10⁶ - 10¹⁰ M^-1 s^-1. The computed kinetic data are reasonably accurate as seen by the comparison with the experimental rate constant in water (pH = 7.0), which results in a k_calculated/k_experimetal ratio of 1.4. The hydrogen transfer (C7, C9, C12)-single electron transfer pathways are the main mechanisms for the HO^• + NCT reaction in pentyl ethanoate solvent to form the cations as the primary products of the two-step reaction. However, in aqueous environments, the degradation of NCT by HO^• radicals increases with increasing pH levels. It is predicted that oxidation products are less toxic than nicotine itself, especially in an aqueous environment with a pH < 7.0.

Photochemical transformation mechanisms of dissolved organic matters (DOM) derived from different bio-stabilization sludge

Bio-stabilization sludge contains numerous dissolved organic matter (DOM) that could enter aquatic environments by soil leaching after sludge land use, but a clear understanding of their photochemical behavior is still lacking. In this study, we systematically investigated the photoactivity and photochemical transformation of aerobic composting sludge-derived DOM (DOM_ACS) and anaerobic digestion sludge-derived DOM (DOM_ADS) by using multispectral analysis coupled with Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR MS). The results indicated that DOM_ACS and DOM_ADS have a higher proportion of highly unsaturated and phenolic compounds (HuPh)with high DBE_wa, but the different polyphenols (Polyph) abundance of them, causing the different photoactivity between them. DOM_ACS had much higher apparent quantum yields (AQY) for triplet states of dissolved natural organic matter (³DOM*) and hydroxyl radical (•OH) but slightly lower AQY for singlet oxygen (¹O₂) than DOM_ADS under simulated sunlight conditions. As the irradiation time increased, HuPh and Polyph (associated with humic-like substances) contained in DOM_ACS (DOM_ADS) decreased by 12.0% (14.1%) and 3.0% (0.2%), respectively, with concurrent decrease in average molecular weight and aromaticity moieties, resulting in more generation of aliphatic compounds. Furthermore, based on 27 types of photochemical transformation reactions, DOM_ACS containing higher fractions of O_10-15 and N_1-3O_y class preferred dealkyl group and carboxylic acid reactions, whereas DOM_ADS composed of more N₄O_y and S₂O_y fragments preferred oxygen addition and anmine reactions. Consequently, photochemical transformations reduced the Cd (II) ion activity in the presence of DOM_ACS (DOM_ADS). This study is believed to unveil the photochemical transformation of bio-stabilization sludge-derived DOM and its impact on pollutants' fate in the aquatic environment.

Combined effects of photoaging and natural organic matter on the colloidal stability of nanoplastics in aquatic environments

The transport and fate of nanoplastics (NPs) in aquatic environments are closely associated with their colloidal stability, which is affected by aging and natural organic matter (NOM) adsorption. This study systematically investigated the combined effects of photoaging and NOM (e.g. humic acids, HA; and a model protein, bovine serum albumin, BSA) on the aggregation kinetics of NPs (polystyrene, PS) in NaCl and CaCl₂ solutions. Our results showed that photoaged NPs adsorbed less HA than pristine NPs due to weaker hydrophobic and π-π interactions. In return, HA showed weaker impacts on NPs' stability after photoaging. Differently, photoaged NPs absorbed more BSA than pristine NPs due to stronger hydrogen bonding and electrostatic attraction. Thus, the inhibitory effects of BSA on the aggregation kinetics of NPs were enhanced after photoaging. Regarding the effects of NOM on the aging of NPs, our results showed that HA competed with NPs for photons and underwent photo-degradation. Subsequently, the destruction/reconstruction of adsorbed HA increased (in NaCl) or decreased (in CaCl₂) the stability of NPs. Notably, light radiation-induced flocculation of BSA molecules, which wrapped and integrated NPs and lead to their destabilization. Overall, this study provided new insights into the aggregation behavior of NPs in aquatic systems, which have significant implications for predicting the transport and fate of NPs in complex real-world environments.

Metabolomics analysis of unresolved molecular variability in stoichiometry dynamics of a stream dissolved organic matter

Broad molecular classification based on stoichiometric ratio relationships has been used extensively to characterize the chemical diversity of aquatic dissolved organic matter (DOM). However, variability in the molecular composition within this classification has remained elusive, thus limiting the interpretation of DOM dynamics, especially with respect to transport versus transformation patterns in response to hydrologic or landscape changes. Here, leveraging high-frequency spatiotemporal sampling during rainfall events at a Critical Zone Observatory project site in Clear Creek, Iowa, we apply a metabolomics-based analysis validated with fragmentation using tandem mass spectrometry to uncover patterns in the molecular features of the DOM composition that were not resolved by classification based on stoichiometric ratios in the chemical formulae. From upstream to downstream sites, beyond the increased aromaticity implied by changes in the stoichiometric ratios, we identified an increased abundance of flavonoids and other phenylpropanoids, two important subgroups of aromatic compounds. The stoichiometric analysis also proposed a localized decline in the abundance of lipid-like compounds, which we attributed specifically to medium-chain and short-chain fatty acids; other lipids such as long-chain fatty acids and sterol lipids remained unchanged. We further determined in-stream molecular transitions and specific compound degradation by capturing changes in the molecular masses of terpenoids, phenylpropanoids, fatty acids, and amino acids. In sum, the metabolomics analysis of the chemical formulae resolved molecular variability imprinted on the stoichiometric DOM composition to implicate key molecular subgroups underlying carbon transport and cycling dynamics in the stream.

Enhanced photochemical production of reactive intermediates at the wetland soil-water interface

Photochemically produced reactive intermediates (PPRIs) formed by sunlight-irradiation of natural photosensitizers play critical roles in accelerating biogeochemical cycles on earth surface. Existing PPRI studies mostly focus on bulk phase reactions (e.g., bulk water), with PPRI processes at the environmental interfaces largely unexplored. Here, we report the wetland soil-water interface (SWI) as a widespread but previously unappreciated hotspot for PPRI productions. Massive productions of four important PPRI species (i.e., triplet-state excited organic matter (³OM*), singlet oxygen (¹O₂), hydrogen peroxide (H₂O₂), and hydroxyl radical (^•OH)) were observed at the SWI. All four PPRI species exhibited higher productions at the SWI than those in bulk water, where ^•OH production was largely elevated by up to one order of magnitude. The enhanced PPRI productions at the SWI were caused by intensified photon absorption and vibrant Fe-mediated redox processes, where the light absorption by less- or non-photoactive soil substances partially offset the enhancement on PPRI productions. Nationwide wetland investigations demonstrate that the SWI was a ubiquitous hotspot for PPRI productions. Simulations on PPRIs-mediated reactions suggest that the enhanced PPRI productions could greatly affect the kinetics and transformation pathways of nutrients and pollutants. Given that the SWI also acts a hotspot for nutrient and pollutant accumulation, incorporating the SWI enhanced PPRI productions into biogeochemical process assessments is pivotal for advancing our understandings on the element cycles and pollutant dynamics in wetlands.

Tide-Triggered Production of Reactive Oxygen Species in Coastal Soils

We report an unrecognized, tidal source of reactive oxygen species (ROS). Using a newly developed ROS-trapping gel film, we observed hot spots for ROS generation within ∼2.5 mm of coastal surface soil. Kinetic analyses showed rapid production of hydroxyl radicals (^•OH), superoxide (O₂^•-), and hydrogen peroxide (H₂O₂) upon a shift from high tide to low tide. The ROS production exhibited a distinct rhythmic fluctuation. The oscillations of the redox potential and dissolved oxygen concentration followed the same pattern as the ^•OH production, suggesting the alternating oxic-anoxic conditions as the main geochemical drive for ROS production. Nationwide coastal field investigations confirmed the widespread and sustainable production of ROS via tidal processes (22.1-117.4 μmol/m²/day), which was 5- to 36-fold more efficient than those via classical photochemical routes (1.5-7.6 μmol/m²/day). Analyses of soil physicochemical properties demonstrated that soil redox-metastable components such as redox-active iron minerals and organic matter played a key role in storing electrons at high tide and shuttling electrons to infiltrated oxygen at low tide for ROS production. Our work sheds light on a ubiquitous but previously overlooked tidal source of ROS, which may accelerate carbon and metal cycles as well as pollutant degradation in coastal soils.

Initial carbon release characteristics, mechanisms and denitrification performance of a novel slow release carbon source

External carbon source addition is one of the effective methods for the treatment of wastewater with low carbon to nitrogen ratio (C/N). Compared with fast-release liquid carbon sources, slow-release solid carbon sources are more suitable for the denitrification process. A novel slow-release solid carbon source (corncob-polyvinyl alcohol sodium alginate- poly-caprolactone, i.e. CPSP) was prepared using corn cob (CC) and poly-caprolactone with polyvinyl alcohol sodium alginate as hybrid scaffold. The physical properties and carbon release characteristics of CPSP and three other carbon sources were compared. CPSP had stable framework and good carbon release performance, which followed the second order release equation. The formic acid, acetic acid, propionic acid and butyric acid released from CPSP accounted for 8.27% ± 1.66 %, 56.48% ± 3.71 %, 18.46% ± 2.69% and 16.79% ± 3.02% of the total released acids respectively. The start-up period of CPSP was shorter than that of the other carbon sources in denitrification experiment, and no COD pollution was observed in the start-up phase (25-72 h) and stable phase (73-240 hr). The composition and structure of the dissolved organic compounds released by CPSP and other carbon sources were analyzed by UV-Vis absorption spectroscopy and three-dimensional fluorescence spectroscopy, which indicated that CPSP was more suitable for denitrification than the other studied carbon sources.

Diel Fluctuation of Extracellular Reactive Oxygen Species Production in the Rhizosphere of Rice

Reactive oxygen species (ROS) are ubiquitous on earth and drive numerous redox-centered biogeochemical processes. The rhizosphere of wetland plants is a highly dynamic interface for the exchange of oxygen and electrons, presenting the basis of the precedent for ROS production, yet whether extracellular ROS are produced in the rhizosphere remains unknown. Here, we designed a microfluidic chip setup to detect in-situ ROS productions in the rhizosphere of rice with spatial and temporal resolutions. Fluorescence imaging clearly displayed the hot spots of ROS generation in the rhizosphere. The formation concentration of the hydroxyl radical (^•OH, a representative ROS, 10^-6 M) was comparable to those by the classical photochemical route (10^-6-10^-7 M) in aquatic systems, therefore highlighting the rhizosphere as an unrecognized hotspot for ROS production. Moreover, the rhizosphere ROS production exhibits diel fluctuation, which simultaneously fluctuated with dissolved oxygen, redox potential, and pH, all driven by radial oxygen loss near the root in the daytime. The production and diel fluctuation of ROS were confirmed in the rhizosphere of rice root incubated in natural soils. We demonstrated that the extracellular ROS production was triggered by the interplay between root-released oxygen and microbial respiration released extracellular electrons, while iron mineral and organic matter might play key roles in storing and shuttling electrons. Our results highlight the rhizosphere as a widespread but previously unappreciated hotspot for ROS production, which may affect pollutant redox dynamics and biogeochemical processes in soils.

Electron shuttle-induced oxidative transformation of arsenite on the surface of goethite and underlying mechanisms

The redox process of electron shuttles like cysteine on iron minerals under aerobic conditions may largely determine the fate of arsenic (As) in soils, while the interfacial processes and underlying mechanisms are barely explored. This work systematically investigates the interfacial oxidation processes of As(III) on goethite induced by cysteine. Results show that the addition of cysteine significantly enhances the oxidation efficiency (~ 40%) of As(III) (C₀: 10 mg/L) by goethite at pH 7 under aerobic conditions, which is 19.5 times of that without cysteine. cysteine induces Fe(III) reduction on the surface of goethite, and the generation absorbed Fe(II) species play an important role in As(III) oxidation. In particular, the further complexation of Fe(II) with cysteine is thermodynamically favorable for electron transfer, leading to an enhanced As(III) oxidation efficiency. The oxidation efficiency of As(III) in the goethite/cysteine system increases by increasing cysteine concentration and decreases by elevating pH conditions. In addition, evidence indicates that •O₂^- radicals account for approximately 80% of total oxidized As(III). Meanwhile, only 16% of As(III) oxidation can be attributed to the formed •OH radicals. This work provides new insight into the role of organic electron shuttling compounds in determining As cycling in soils.

Oxidation of pyrazolone pharmaceuticals by peracetic acid: Kinetics, mechanism and genetic toxicity variations

Peracetic acid (PAA) oxidation is an emerging technology in water disinfection and purification. This study evaluated the oxidation of three pyrazolone pharmaceuticals (i.e., Aminopyrine (AMP), Antipyrine (ANT), and Isopropylphenazone (PRP) by PAA. Experimental results showed that PAA exhibited structure selectivity to the above three pharmaceuticals and oxidized AMP with the highest reactivity. The degradation kinetics of AMP was investigated by calculating the apparent second-order rate constants (k_app) under different initial pH. Through kinetic simulation, the second-order rate constants of elementary reactions between AMP (i.e., neutral (AMP⁰) and protonated (AMP⁺) species) with PAA (i.e., neutral (PAA⁰) and anionic (PAA^-) species) were obtained to be 0.34 ± 0.077 M^-1 s^-1(k"_{AMP+, PAA0}), 0.89 ± 0.091 M^-1 s^-1(k"_{AMP0, PAA-}) and 5.94 ± 0.142 M^-1 s^-1(k"_{AMP0, PAA0}), respectively. The PAA could oxidize AMP via electrophilic attack, and the degradation site of AMP was confirmed to be the central nitrogen of -N(CH₃)₂ with the highest relative electrophilicity (s_k^-/s_k⁺, 48.8614) by Density Functional Theory (DFT) calculation. The intermediates/products of AMP degradation were identified by high-performance liquid chromatography-mass spectrometry (LC-MS/MS), and the transformation pathways of AMP during PAA oxidation were inferred to be hydroxylation, demethylation, and CC cleavage. The genetic toxicity of AMP contaminated water could be reduced after PAA oxidation, which was evaluated by the micronucleus test of Vicia faba root tips.

Asymmetrical Flow Field-Flow Fractionation Methods for Quantitative Determination and Size Characterization of Thiols and for Mercury Size Speciation Analysis in Organic Matter-Rich Natural Waters

Asymmetrical flow field-flow fractionation (AF4) efficiently separates various macromolecules and nano-components of natural waters according to their hydrodynamic sizes. The online coupling of AF4 with fluorescence (Fluo) and UV absorbance (UV) detectors (FluoD and UVD, respectively) and inductively coupled plasma–mass spectrometry (ICP-MS) provides multidimensional information. This makes it a powerful tool to characterize and quantify the size distributions of organic and inorganic nano-sized components and their interaction with trace metals. In this study, we developed a method combining thiol labeling by monobromo(trimethylammonio)bimane bromide (qBBr) with AF4–FluoD to determine the size distribution and the quantities of thiols in the macromolecular dissolved organic matter (DOM) present in highly colored DOM-rich water sampled from Shuya River and Lake Onego, Russia. We found that the qBBr-labeled components of DOM (qB-DOM) were of humic type, characterized by a low hydrodynamic size (dh &lt; 2 nm), and have concentrations &lt;0.3 μM. After enrichment with mercury, the complexes formed between the nano-sized components and Hg were analyzed using AF4–ICP-MS. The elution profile of Hg followed the distribution of the UV-absorbing components of DOM, characterized by slightly higher sizes than qB-DOM. Only a small proportion of Hg was associated with the larger-sized components containing Fe and Mn, probably inorganic oxides that were identified in most of the samples from river to lake. The size distribution of the Hg–DOM complexes was enlarged when the concentration of added Hg increased (from 10 to 100 nM). This was explained by the presence of small iron oxides, overlapping the size distribution of Hg–DOM, on which Hg bound to a small proportion. In addition, to provide information on the dispersion of macromolecular thiols in colored DOM-rich natural water, our study also illustrated the potential of AF4–FluoD–UVD–ICP-MS to trace or quantify dynamic changes while Hg binds to the natural nano-colloidal components of surface water.

Comparing Photoactivities of Dissolved Organic Matter Released from Rice Straw-Pyrolyzed Biochar and Composted Rice Straw

Here, we systematically compared the photoactivity and photobleaching behavior between dissolved black carbon (DBC) from rice straw biochar and leached dissolved organic carbon (LDOC) from rice straw compost using complementary techniques. The Fourier transform-ion cyclotron resonance mass spectrometry (FT-ICR MS) analysis showed that DBC was dominated by polycyclic aromatic (55.1%) and tannin-like molecules (24.1%), while LDOC was dominated by lignin-like (58.9%) and tannin-like molecules (19.7%). Under simulated sunlight conditions, DBC had much higher apparent quantum yields for ³DOM* and ¹O₂ but much lower apparent quantum yields for ^•OH than LDOC. After a 168 h irradiation, the total number of LDOC formulas identified by FT-ICR MS decreased by 40.1% with concurrent increases in O/C and H/C ratios and also decreases in double bond equivalence minus oxygen (DBE - O) and average molecular weight identified by gel permeation chromatography. However, despite the large decreases in UVA₂₅₄ and DOC, the total number of DBC formulas decreased only by 12.0% with nearly unchanged O/C ratio, DBE - O values, molecular weight distribution, and benzenepolycarboxylic aromatic condensation (BACon) index regardless of the decreased percentage of condensed aromatic carbon (ConAC %). Compared with LDOC, the photolysis of DBC was much less oxidative and destructive mainly via breakup of a small portion of the highly condensed aromatic rings, probably accompanied by photodecarboxylation.

High Sample Throughput LED Reactor for Facile Characterization of the Quantum Yield Spectrum of Photochemically Produced Reactive Intermediates

Photochemically produced reactive intermediates (PPRIs) by natural photosensitizers such as chromophoric dissolved organic matter (CDOM) play numerous key roles in aquatic biogeochemical processes. PPRI productions rely on both the intensity and the spectrum of incident sunlight. While the impacts of sunlight intensity on PPRI productions are well-studied, there remains insufficient understanding of the spectrum-dependence of PPRI productions. Here we designed a high sample throughput reactor equipped with monochromatic LED lights for systematic assessments of wavelength-dependent productions of four important PPRI species, i.e., triplet-state excited CDOM (³CDOM*), singlet oxygen (¹O₂), hydrogen peroxide (H₂O₂), and hydroxyl radical (^•OH), in CDOM solutions. The quantum yields of PPRIs followed the order: ³CDOM* > ¹O₂ ≫ H₂O₂ > ^•OH. Moreover, PPRI quantum yields decreased with the light wavelength increasing from 375 to 490 nm and sharply decreased to zero above 490 nm, while the shapes of quantum yield spectra differed among PPRI species. Simulations on PPRI productions under varying season, latitude, altitude, and cloud cover conditions show that the sunlight spectrum plays a role as equally important as intensity in determining PPRI productions and PPRI-mediated transformations of aquatic nutrients and micropollutants. Therefore, incorporating the spectrum dependence of PPRI productions will advance our understandings of PPRI-driven biogeochemical processes and pollutant dynamics under varying spatial-temporal and climatic conditions. Regarding this, the high sample throughput LED reactor sheds light on a new approach for the facile characterization of PPRI quantum yield spectrum.

Influence of dissolved organic matter on carbonyl sulfide and carbon disulfide formation from dimethyl sulfide during sunlight photolysis

Carbonyl sulfide (COS) and carbon disulfide (CS₂ ) are important atmospheric gases photochemically generated from organic sulfur precursors in sunlit natural waters. This study examined these processes by evaluating COS and CS₂ photoproduction from dimethyl sulfide (DMS) in the presence of dissolved organic matter (DOM). DOM was added because it photochemically produces various reactive intermediates (³ CDOM*, ^• OH, ¹ O₂ , and H₂ O₂ ) potentially involved in these reaction pathways. DMS-amended synthetic waters at pH 8 were varied in terms of their DOM type and concentration, spiked with the ³ CDOM* quenching agent, phenol, in certain cases, and subsequently irradiated over varying exposure times. Results indicated that various DOM types ranging from freshwater to open-ocean DOM increased COS but did not alter CS₂ , which remained at nondetect levels. DOM type influenced COS only at higher concentrations (20 mg/L), whereas increasing DOM concentrations proportionally increased COS concentrations for all DOM types. Phenol addition lowered COS formation for reasons that remained unclear because phenol likely quenched ³ CDOM* and DMS-derived sulfur-based radicals. Further comparisons with DMS-spiked natural waters and cysteine (CYS)-spiked synthetic and natural waters assessed previously indicated that COS formation from both precursors in natural waters was always greater than in waters containing DOM alone. PRACTITIONER POINTS: DMS- and DOM-spiked synthetic waters formed COS but did not form CS₂ during sunlight photolysis. In DMS-spiked synthetic solutions, DOM type has a limited influence on COS formation whereas DOM concentration has a stronger influence on COS formation. COS formation in the DMS-spiked synthetic waters was fairly proportional to the DOC concentration but was generally lower than COS formation in DMS-spiked natural waters.

Photosensitized formation of sulfate and volatile sulfur gases from dissolved organic sulfur: Roles of pH, dissolved oxygen, and salinity

The photodegradation of dissolved organic sulfur (DOS) is a potential source of aqueous sulfate and its chemical precursors in surface water. However, the photochemical fate of DOS and factors that control its fate still remain unclear. Herein, we employed a DOS model featuring a photosensitizer (humic acids, HA) to investigate the photochemical degradation pathways of DOS in various natural water sources, from which we observed the substantial photosensitized formation of sulfate, methanesulfonic acid (MSA), carbonyl sulfide (COS), and carbon disulfide (CS₂). However, the photochemical production of sulfate and MSA tends to be more efficient than COS and CS₂. The formation of sulfur-containing photodegradation products was also strongly affected by the identity of the organic sulfur precursor, the oxygen concentration, and the pH, while the salinity did not significantly influence the production ratios. Our results revealed that the photosensitization of DOS contributed significantly to the overall production of sulfate and MSA production, especially in acidic and oxygen-enriched environments, which was attributed to the photochemical production of reactive intermediates, such as excited CDOM (³CDOM*) and reactive oxygen species (ROS). Considering the coexistence of DOS and photosensitizers in aquatic environments, photochemistry may play an essential role in the fate of aquatic DOS.

Combined NMR and Computational Study of Cysteine Oxidation during Nucleation of Metallic Clusters in Biological Systems

The widespread biomedical applications of silver and gold nanoparticles (AgNPs and AuNPs, respectively) prompt the need for mechanistic evaluation of their interaction with biomolecules. In biological media, metallic NPs are known to transform by various pathways, especially in the presence of thiols. The interplay between metallic NPs and thiols may lead to unpredictable consequences for the health status of an organism. This study explored the potential events occurring during biotransformation, dissolution, and reformation of NPs in the thiol-rich biological media. The study employed a model system evaluating the interaction of cysteine with small-sized AgNPs and AuNPs. The interplay of cysteine on transformation and reformation pathways of these NPs was experimentally investigated by nuclear magnetic resonance (NMR) spectroscopy and supported by light scattering techniques and transmission electron microscopy (TEM). As the main outcome, Ag- or Au-catalyzed oxidation of cysteine to cystine was found to occur through generation of reactive oxygen species (ROS). Computational simulations confirmed this mechanism and the role of ROS in the oxidative dimerization of biothiol during NPs reformation. The obtained results represent valuable mechanistic data about the complex events during the transport of metallic NPs in thiol-rich biological systems that should be considered for the future biomedical applications of metal-based nanomaterials.

Photochemistry of dissolved organic matter extracted from coastal seawater: Excited triplet-states and contents of phenolic moieties

Coastal seawater constitutes an important ecosystem receiving inputs of organic micropollutants (OMPs) such as sulfa antibiotics from land-based sources or mariculture activities. It is necessary to investigate photodegradation of OMPs in coastal seawaters for assessing their environmental fate and risks. However, effects of coastal seawater dissolved organic matter (S-DOM) on OMPs photodegradation are largely unknown, given that chemical compositions of S-DOM are different from those of freshwater DOM. Herein, photochemical characteristics of S-DOM extracted from Dalian coastal seawaters were investigated by simulating photochemical experiment adopting sulfachloropyridazine as a case. Results show that S-DOM accelerates the photodegradation mainly through excited triplet-state DOM (³DOM*) with an apparent rate constant (4.43 × 10⁸ M^-1 s^-1) ten folds of that of freshwater DOM, which is mainly due to much lower phenol contents detected in the S-DOM (0.022 mg-Gallic acid mg-C^-1). The S-DOM impacted by mariculture can photogenerate more high-energy ³DOM* than those less impacted by mariculture, further contributing to the high ³DOM* reactivity. The study shows that to accurately predict photolytic persistence of OMPs in field water bodies, it is of significance to determine the second-order reaction rate constants between ³DOM* and target OMPs using DOM extracted from relevant water bodies.

Inactivation and Site-specific Oxidation of Aquatic Extracellular Bacterial Leucine Aminopeptidase by Singlet Oxygen

Extracellular enzymes are master recyclers of organic matter, and to predict their functional lifetime, we need to understand their environmental transformation processes. In surface waters, direct and indirect photochemical transformation is a known driver of inactivation. We investigated molecular changes that occur along with inactivation in aminopeptidase, an abundant class of extracellular enzymes. We studied the inactivation kinetics and localized oxidation caused by singlet oxygen, ¹O₂, a major photochemically derived oxidant toward amino acids. Aminopeptidase showed second-order inactivation rate constants with ¹O₂ comparable to those of free amino acids. We then visualized site-specific oxidation kinetics within the three-dimensional protein and demonstrated that fastest oxidation occurred around the active site and at other reactive amino acids. However, second-order oxidation rate constants did not correlate strictly with the ¹O₂-accessible surface areas of those amino acids. We inspected site-specific processes by a comprehensive suspect screening for 723,288 possible transformation products. We concluded that histidine involved in zinc coordination at the active site reacted slower than what was expected by its accessibility, and we differentiated between two competing reaction pathways of ¹O₂ with tryptophan residues. This systematic analysis can be directly applied to other proteins and transformation reactions.

Mechanistic Insights into Dissolved Organic Sulfur Photomineralization through the Study of Cysteine Sulfinic Acid

Photochemical reactions convert dissolved organic matter (DOM) into inorganic and low-molecular-weight organic products, contributing to its cycling across environmental compartments. However, knowledge on the formation mechanisms of these products is still scarce. In this work, we investigate the triplet-sensitized photodegradation of cysteine sulfinic acid, a (photo)degradation product of cysteine, to sulfate (SO₄^2-). We use kinetic analysis, targeted experiments, and previous literature from several fields of chemistry to explain the elementary steps that lead to the release of sulfate. Our analysis indicates that triplet sensitizers act as one-electron oxidants on the sulfinate S lone pair. The resulting radical undergoes C-S fragmentation to form SO₂, which becomes hydrated to sulfite/bisulfite (S(IV)). S(IV) is further oxidized to SO₄^2- in the presence of triplet sensitizers and oxygen. We point out that the reaction sequence SO₂ ⇌ S(IV) → SO₄^2- is valid independently of the chemical structure of the model compound and might represent a sulfate photoproduction mechanism with general validity for DOS. Our mechanistic investigation revealed that amino acids in general might also be photochemical precursors of CO₂, ammonia, acetaldehyde, and H₂O₂ and that reaction byproducts can influence the rate and mechanism of S(IV) (photo)oxidation.

Influence of dissolved organic matter on carbonyl sulfide and carbon disulfide formation from cysteine during sunlight photolysis

Carbonyl sulfide (COS) and carbon disulfide (CS2) are important atmospheric gases that are formed from organic sulfur precursors present in natural waters when exposed to sunlight. However, it remains unclear how specific water constituents, such as dissolved organic matter (DOM), affect COS and CS2 formation. To better understand the role of DOM, irradiation experiments were conducted in O2-free synthetic waters containing four different DOM isolates, acquired from freshwater to open ocean sources, and the sulfur-based amino acid, cysteine (CYS). CYS is a known natural precursor of COS and CS2. Results indicated that COS formation did not vary strongly with DOM type, although small impacts were observed on the kinetic patterns. COS formation also increased with increasing CYS concentration but decreased with increasing DOM concentration. Quenching experiments indicated that ˙OH was not involved in the rate-limiting step of COS formation, whereas excited triplet states of DOM (3CDOM*) were plausibly involved, although the quenching agents used to remove 3CDOM* may have reacted with the CYS-derived intermediates as well. CS2 was not formed under any of the experimental conditions. Overall, DOM-containing synthetic waters had a limited to no effect towards forming COS and CS2, especially when compared to the higher concentrations formed in sunlit natural waters, as examined previously. The reasons behind this limited effect need to be explored further but may be due to the additional water quality constituents present in these natural waters. The findings of this study imply that multiple variables beyond DOM govern COS and CS2 photoproduction when moving from freshwaters to open ocean waters.

Unrecognized Contributions of Dissolved Organic Matter Inducing Photodamages to the Decay of Extracellular DNA in Waters

Extracellular DNA (eDNA), which is derived from lysis or secretion of cells, is ubiquitous in various environments and crucial for gene dissemination, bacterial metabolism, biofilm integrity, and aquatic monitoring. However, these processes are largely influenced by damage to eDNA. Photodamage to eDNA, one of the most important types of DNA damage in natural waters, thus far remains unclear. In particular, the roles of the ubiquitous dissolved organic matter (DOM) in this process have yet to be determined. In this study, eDNA photodamage, including both deoxynucleoside damage and strand breaks, proved to be significantly influenced by DOM. DOM competed with eDNA for photons to inhibit the direct photodamage of eDNA. Nevertheless, DOM was photosensitized to produce reactive oxygen species (ROS) (i.e., hydroxyl radicals (·OH) and singlet oxygen (¹O₂)) to enhance the indirect photodamage of eDNA. The ·OH induced damage to four deoxynucleosides and strand breaks, and the ¹O₂ substantially enhanced deoxyguanosine damage. The presence of DOM changed the main photodamage products of deoxynucleosides, additional oxidation products induced by ROS formed besides pyrimidine dimers caused by UV. Results indicate that DOM-mediated indirect photodamage contributed significantly to eDNA photodamage in most water bodies. This study revealed the previously unrecognized crucial role of DOM in the decay of eDNA in waters.

Overview of the Phototransformation of Wastewater Effluents by High-Resolution Mass Spectrometry

Photochemical transformation driven by sunlight is one of the most important natural processes for organic contaminant attenuation. In the current study, statistical analysis-assisted high-resolution mass spectrometry was employed to investigate the phototransformation of nontarget features in wastewater effluents under various radical quenching/enhancing conditions. A total of 9694 nontarget features were extracted from the effluents, including photoresistant features, photolabile features, and transformation products. 65% of the wastewater effluent features were photoresistant, and the photolabile features could be classified into five groups: direct photolysis group (group I), HO^•-originated species-dominated group (group II), ³OM*-dominated group (group III), photochemically produced reactive intermediates combination-dominated group (group IV), and non-first-order degradation group (group V). The direct photolyzed features were observed to degrade significantly faster than the indirect photolyzed features. Moreover, group II dominated by HO^•-originated species contributed 34% to the photolabile features. The reaction types that occurred in the phototransformation process were analyzed by linkage analysis. The results suggested that oxygen addition and dealkyl group reactions were the most common reaction types identified in the phototransformation process. Overall, high-resolution mass spectrometry coupled with statistical analysis was applied here to understand the photochemical behavior of the unknown features in wastewater effluents.

Enhanced Photodegradation of Extracellular Antibiotic Resistance Genes by Dissolved Organic Matter Photosensitization

Extracellular antibiotic resistance genes (eARGs) contribute to antibiotic resistance, and as such, they pose a serious threat to human health. eARGs, regarded as an emerging contaminant, have been widely detected in various bodies of water. Degradation greatly weakens their distribution potential and environmental risks. Dissolved organic matter (DOM), mainly consisted of humic substances, carbohydrates, and organic acids, is ubiquitous in diverse waters and significantly affects the degradation of coexisting contaminants. However, the photodegradation of eARGs in natural water, especially regarding the roles of DOM in this process, remains unknown. Herein, we investigated the eARGs photodegradation in waters with and without DOM. Illumination has been found to effectively photodegrade eARGs, and this process was significantly enhanced by DOM. Further experiments revealed that photosensitization of DOM produced hydroxyl radicals (^•OH) to enhance plasmid strand breaks and produced singlet oxygen (¹O₂) to accelerate the guanine oxidation, which in turn promoted the photodegradation of plasmid-carried eARGs. Transformation assays indicated that eARGs transformation efficiencies were reduced after their photodegradation. The presence of DOM accelerated the decreases of eARGs transformation efficiencies under illumination. DOM concentration and some ions (e.g., NO₃^-, NO₂^-, HCO₃^-, Br^-, and Fe³⁺) affected ^•OH or ¹O₂ levels, further influencing the photodegradation of eARGs. Overall, eARGs photodegradation in aquatic environments is a crucial process both in the reduction of eARGs concentrations and in transformation efficiencies. This work facilitated us to better understand the fate of eARGs in waters.

Cooperative Pollutant Adsorption and Persulfate-Driven Oxidation on Hierarchically Ordered Porous Carbon

This study presents a 3D hierarchically ordered porous carbon material (HOPC) that simultaneously achieves efficient adsorption of a range of water pollutants as well as catalytic oxidation of adsorbed pollutants. High adsorption capacity and rapid adsorption kinetics are attributed to the hydrophobic nature of the carbon substrate, the large surface area due to high porosity, and the relatively uniform size of pores that comprise the structure. The oxidative degradation is achieved by efficient mediation of electron transfer from pollutants to persulfate through the sp²-hybridized carbon and nitrogen network. As the persulfate activation and pollutant oxidation do not involve reactive radicals, oxidative degradation of the adsorbent is prevented, which has been a primary concern when adsorption and oxidation are combined either to regenerate adsorbate or to enhance oxidation performance. Batch tests showed that near complete removal of various recalcitrant micropollutants can be achieved within a short time (less than 1 min) even when treating a complex water matrix, as pollutants are concentrated on the surface of HOPC, where their oxidation is catalyzed.

Photochemistry of Surface Fresh Waters in the Framework of Climate Change

Photochemical processes taking place in surface fresh waters play an important role in the transformation of biorecalcitrant pollutants and some natural compounds and in the inactivation of microorganisms. Such processes are divided into direct photolysis, where a molecule is transformed following sunlight absorption, and indirect photochemistry, where naturally occurring photosensitizers absorb sunlight and produce a range of transient species that can transform dissolved molecules (or inactivate microorganisms). Photochemistry is usually favored in thoroughly illuminated shallow waters, while the dissolved organic carbon (DOC) acts as a switch between different photochemical pathways (direct photolysis, and indirect photochemistry triggered by different transient species). Various phenomena connected with climate change (water browning, changing precipitations) may affect water DOC and water depth, with implications for the kinetics of photoreactions and the associated transformation pathways. The latter are important because they often produce peculiar intermediates, with particular health and environmental impacts. Further climate-induced effects with photochemical implications are shorter ice-cover seasons and enhanced duration of summer stratification in lakes, as well as changes in the flow velocity of rivers that affect the photodegradation time scale. This contribution aims at showing how the different climate-related phenomena can affect photoreactions and which approaches can be followed to quantitatively describe these variations.

Effects of Sunlight on the Trichloronitromethane Formation Potential of Wastewater Effluents: Dependence on Nitrite Concentration

This study examined the effects of sunlight irradiation on the trichloronitromethane formation potential (TCNM-FP) of wastewater effluents and the roles of nitrite and nitrate in this process. Using disinfected secondary effluents from four treatment plants, we observed that sunlight irradiation (320 W/m²) for 8 h attenuated the TCNM-FP by 17-47% for 9 of 14 samples but increased the TCNM-FP for two of the other samples. A longer irradiation time (≤36 h) further reduced the TCNM-FP in a non-nitrified effluent with low nitrite and nitrate concentrations but increased the TCNM-FP in two nitrified effluents by 2-3-fold. When nitrite (0.1-2 mg N/L) was spiked into effluent samples, an increase in the TCNM-FP after irradiation was observed. The higher the nitrite concentration, the greater the increase in the TCNM-FP. In the presence of ∼1 mg N/L of nitrite, sunlight irradiation for 8 h increased the TCNM-FP of four wastewater samples by 0.3-3.6 μg/mg C. In contrast, the spike of nitrate up to 20 mg N/L had no effect. The nitrite-sunlight effect was also observed for four model precursors (humic acid, tryptophan, tyrosine, and phenol). Humic acid and tryptophan featured larger increases in the TCNM-FP compared to those of tyrosine and phenol after sunlight irradiation.

Enhanced Phototransformation of Tetracycline at Smectite Clay Surfaces under Simulated Sunlight via a Lewis-Base Catalyzed Alkalization Mechanism

As an important class of soil minerals and a key constituent of colloidal particles in surface aquifers, smectite clays can strongly retain tetracyclines due to their large surface areas and high cation exchange capacities. However, the research on phototransformation of tetracyclines at smectite clay surfaces is rarely studied. Here, the phototransformation kinetics of tetracycline preadsorbed on two model smectite clays (hectorite and montmorillonite) exchanged with Na⁺, K⁺, or Ca²⁺ suspended in aqueous solution under simulated sunlight was compared with that of tetracycline dissolved in water using batch experiments. Adsorption on clays accelerated tetracycline phototransformation (half-lives shortened by 1.1-5.3 times), with the most significant effects observed for Na⁺-exchanged clays. Regardless of the presence or absence of clay, the phototransformation of tetracycline was facilitated by increasing pH from 4 to 7. Inhibition or enhancement of photolysis-induced reactive species combined with their measurement using scavenger/probe chemicals indicate that the facilitated production of self-photosensitized singlet oxygen (¹O₂) was the key factor contributing to the clay-enhanced phototransformation of tetracycline. As evidenced by the red shifts and the increased molar absorptivity in the UV-vis absorption spectra, the complexation of tetracycline with the negatively charged (Lewis base) sites on clay siloxane surfaces led to formation of the alkalized form, which has larger light absorption rate and is more readily to be oxidized compared to tetracycline in aqueous solution at equivalent pH. Our findings indicate a previously unrecognized, important phototransformation mechanism of tetracyclines catalyzed by smectite clays.

Oxidation of amino acids by peracetic acid: Reaction kinetics, pathways and theoretical calculations

Peracetic acid (PAA) is a sanitizer with increasing use in food, medical and water treatment industries. Amino acids are important components in targeted foods for PAA treatment and ubiquitous in natural waterbodies and wastewater effluents as the primary form of dissolved organic nitrogen. To better understand the possible reactions, this work investigated the reaction kinetics and transformation pathways of selected amino acids towards PAA. Experimental results demonstrated that most amino acids showed sluggish reactivity to PAA except cysteine (CYS), methionine (MET), and histidine (HIS). CYS showed the highest reactivity with a very rapid reaction rate. Reactions of MET and HIS with PAA followed second-order kinetics with rate constants of 4.6 ± 0.2, and 1.8 ± 0.1 M^-1⋅s^-1 at pH 7, respectively. The reactions were faster at pH 5 and 7 than at pH 9 due to PAA speciation. Low concentrations of H₂O₂ coexistent with PAA contributed little to the oxidation of amino acids. The primary oxidation products of amino acids with PAA were [O] addition compounds on the reactive sites at thiol, thioether and imidazole groups. Theoretical calculations were applied to predict the reactivity and regioselectivity of PAA electrophilic attacks on amino acids and improved mechanistic understanding. As an oxidative disinfectant, the reaction of PAA with organics to form byproducts is inevitable; however, this study shows that PAA exhibits lower and more selective reactivity towards biomolecules such as amino acids than other common disinfectants, causing less concern of toxic disinfection byproducts. This attribute may allow greater stability and more targeted actions of PAA in various applications.

Indirect Photochemical Formation of Carbonyl Sulfide and Carbon Disulfide in Natural Waters: Role of Organic Sulfur Precursors, Water Quality Constituents, and Temperature

Carbonyl sulfide (COS) and carbon disulfide (CS₂) are volatile sulfur compounds that are critical precursors to sulfate aerosols, which enable climate cooling. COS and CS₂ stem from the indirect photolysis of organic sulfur precursors in natural waters, but currently the chemistry behind how this occurs remains unclear. This study evaluated how different organic sulfur precursors, water quality constituents, which can form important reactive intermediates (RIs), and temperature affected COS and CS₂ formation. Nine natural waters ranging in salinity were spiked with cysteine, cystine, dimethylsulfide (DMS), or methionine and exposed to simulated sunlight over varying times and water quality conditions. Results indicated that COS and CS₂ formation increased up to 11× and 4×, respectively, after 12 h of sunlight, while diurnal cycling exhibited varied effects. COS and CS₂ formation was also strongly affected by the DOC concentration, organic sulfur precursor type, O₂ concentration, and temperature, while salinity differences and CO addition did not play a significant role. Overall, important factors in forming COS and CS₂ were identified, which may ultimately impact their atmospheric concentrations.

Thermodynamics of Hg(II) Bonding to Thiol Groups in Suwannee River Natural Organic Matter Resolved by Competitive Ligand Exchange, Hg LIII-Edge EXAFS and 1H NMR Spectroscopy

A molecular level understanding of the thermodynamics and kinetics of the chemical bonding between mercury, Hg(II), and natural organic matter (NOM) associated thiol functional groups (NOM-RSH) is required if bioavailability and transformation processes of Hg in the environment are to be fully understood. This study provides the thermodynamic stability of the Hg(NOM-RS)₂ structure using a robust method in which cysteine (Cys) served as a competing ligand to NOM (Suwannee River 2R101N sample) associated RSH groups. The concentration of the latter was quantified to be 7.5 ± 0.4 μmol g^-1 NOM by Hg L_III-edge EXAFS spectroscopy. The Hg(Cys)₂ molecule concentration in chemical equilibrium with the Hg(II)-NOM complexes was directly determined by HPLC-ICPMS and losses of free Cys due to secondary reactions with NOM was accounted for in experiments using ¹H NMR spectroscopy and ¹³C isotope labeled Cys. The log K ± SD for the formation of the Hg(NOM-RS)₂ molecular structure, Hg²⁺ + 2NOM-RS^- = Hg(NOM-RS)₂, and for the Hg(Cys)(NOM-RS) mixed complex, Hg²⁺ + Cys^- + NOM-RS^- = Hg(Cys)(NOM-RS), were determined to be 40.0 ± 0.2 and 38.5 ± 0.2, respectively, at pH 3.0. The magnitude of these constants was further confirmed by ¹H NMR spectroscopy and the Hg(NOM-RS)₂ structure was verified by Hg L_III-edge EXAFS spectroscopy. An important finding is that the thermodynamic stabilities of the complexes Hg(NOM-RS)₂, Hg(Cys)(NOM-RS) and Hg(Cys)₂ are very similar in magnitude at pH values <7, when all thiol groups are protonated. Together with data on 15 low molecular mass (LMM) thiols, as determined by the same method ( Liem-Ngyuen et al. Thermodynamic stability of mercury(II) complexes formed with environmentally relevant low-molecular-mass thiols studied by competing ligand exchange and density functional theory . Environ. Chem. 2017 , 14 , ( 4 ), 243 - 253 .), the constants for Hg(NOM-RS)₂ and Hg(Cys)(NOM-RS) represent an internally consistent thermodynamic data set that we recommend is used in studies where the chemical speciation of Hg(II) is determined in the presence of NOM and LMM thiols.

Transcriptome Changes of Escherichia coli, Enterococcus faecalis, and Escherichia coli O157:H7 Laboratory Strains in Response to Photo-Degraded DOM

In this study, we investigated gene expression changes in three bacterial strains (Escherichia coli C3000, Escherichia coli O157:H7 B6914, and Enterococcus faecalis ATCC 29212), commonly used as indicators of water quality and as control strains in clinical, food, and water microbiology laboratories. Bacterial transcriptome responses from pure cultures were monitored in microcosms containing water amended with manure-derived dissolved organic matter (DOM), previously exposed to simulated sunlight for 12 h. We used RNA sequencing (RNA-seq) and quantitative real-time reverse transcriptase (qRT-PCR) to compare differentially expressed temporal transcripts between bacteria incubated in microcosms containing sunlight irradiated and non-irradiated DOM, for up to 24 h. In addition, we used whole genome sequencing simultaneously with RNA-seq to identify single nucleotide variants (SNV) acquired in bacterial populations during incubation. These results indicate that E. coli and E. faecalis have different mechanisms for removal of reactive oxygen species (ROS) produced from irradiated DOM. They are also able to produce micromolar concentrations of H₂O₂ from non-irradiated DOM, that should be detrimental to other bacteria present in the environment. Notably, this study provides an assessment of the role of two conjugative plasmids carried by the E. faecalis and highlights the differences in the overall survival dynamics of environmentally-relevant bacteria in the presence of naturally-produced ROS.

Aquatic indirect photochemical transformations of natural peptidic thiols: impact of thiol properties, solution pH, solution salinity and metal ions

Natural peptidic thiols play numerous important roles in aquatic systems. While thiols are known to be susceptible to sensitized photoreaction, the photochemical transformation of thiols in surface waters remains largely unknown. This study systematically assessed the photochemical transformation of naturally occurring thiols, including arginylcysteine (RC), γ-glutamylcysteine (γEC), glutathione (GSH), and phytochelatin (PC) in solutions containing dissolved organic matter (DOM). The results show that all thiols underwent rapid indirect photochemical transformation. The transformation rates of thiols were highly pH-dependent and increased with increasing solution pH. γEC and GSH show lower transformation rates than free Cys, which was ascribed to their higher thiol pK_a values. In comparison, PC and RC show much higher transformation rates than γEC and GSH, due to more reactive thiol groups contained in the PC molecule and sorption of RC to DOM macromolecules, respectively. While all investigated pathways contributed to thiol transformation, hydroxyl radical-mediated oxidation dominated at low solution pH and singlet oxygen-mediated oxidation dominated at high solution pH in the DOM-sensitized phototransformations of γEC, GSH, and PC. Furthermore, the effects of metal complexation and solution salinity on thiol transformation rates were examined. Thiol reactivity was not affected by Fe³⁺ and Ag⁺, slightly enhanced in the presence of Zn²⁺, Cd²⁺ and Hg²⁺, and significantly enhanced by Cu²⁺. Additionally, enhanced thiol transformation rates were observed in solutions with high salinity.

Triplet-State Dissolved Organic Matter Quantum Yields and Lifetimes from Direct Observation of Aromatic Amine Oxidation

Excited triplet state chromophoric dissolved organic matter (³CDOM*) is a short-lived mixture of excited-state species that plays important roles in aquatic photochemical processes. Unlike the study of the triplet states of well-defined molecules, which are amenable to transient absorbance spectroscopy, the study of ³CDOM* is hampered by it being a complex mixture and its low average intersystem crossing quantum yield (Φ_ISC). This study is an alternative approach to investigating ³CDOM* using transient absorption laser spectroscopy. The radical cation of N,N,N',N'-tetramethyl-p-phenylenediamine (TMPD), formed through oxidation by ³CDOM*, was directly observable by transient absorption spectroscopy and was used to probe basic photophysical properties of ³CDOM*. Quenching and control experiments verified that TMPD^•+ was formed from ³CDOM* under anoxic conditions. Model triplet sensitizers with a wide range of excited triplet state reduction potentials and CDOM oxidized TMPD at near diffusion-controlled rates. This gives support to the idea that a large cross-section of ³CDOM* moieties are able to oxidize TMPD and that the complex mixture of ³CDOM* can be simplified to a single signal. Using the TMPD^•+ transient, the natural triplet lifetime and Φ_ISC for different DOM isolates and natural waters were quantified; values ranged from 12 to 26 μs and 4.1-7.8%, respectively.

Environmental Fate of Insecticidal Plant-Incorporated Protectants from Genetically Modified Crops: Knowledge Gaps and Research Opportunities

Plant-incorporated protectants (PIPs) are biopesticides expressed in genetically modified (GM) crops and are typically macromolecular in nature. First-generation insecticidal PIPs were Cry proteins expressed in GM crops containing transgenes from the soil bacterium Bacillus thuringiensis; next-generation double-stranded ribonucleic acid (dsRNA) PIPs have been recently approved. Like conventional synthetic pesticides, the use of either Cry protein or dsRNA PIPs results in their release to receiving environments. However, as opposed to conventional low molecular weight pesticides, the environmental fate of macromolecular PIPs remains less studied and is poorly understood. This Feature highlights the knowledge gaps and challenges that have emerged while investigating the environmental fate of Cry protein PIPs and suggests new avenues to advance the state of the research necessary for the ongoing environmental fate assessment of dsRNA PIPs.

UV characterization and photodegradation mechanism of the fungicide chlorothalonil in the presence and absence of oxygen

An experimental and theoretical study of the UV spectrum of chlorothalonil (CT) was carried out and the vibrationally resolved HOMO→LUMO transition is presented for the first time. The fluorescence spectrum has also been recorded. Furthermore, preparative photolysis allowed a detailed study of the photoproducts formed with recognition of different isomers. In the presence of oxygen only the first reductive dechlorination-decyanation occurred, while in its absence a successive dechlorination-decyanation takes place.

Photochemical Transformation of Nicotine in Wastewater Effluent

Nicotine is a highly toxic tobacco alkaloid that is ubiquitous in wastewater effluent. For the first time, we report the identification of the products and the pathways for the photodegradation of nicotine in an effluent matrix under simulated solar irradiation. Nicotine was found to be degraded by triplet-state organic matter (³OM*), thus indicating that electron transfer is a preferred reaction mechanism. Using the multivariate statistical strategies orthogonal projection to latent structures discriminant analysis (OPLS-DA) and hierarchical clustering, 49 potential transformation products (TPs) of nicotine were successfully extracted from the water matrix via high-resolution ultrahigh-performance liquid chromatography-quadrupole time-of-flight mass spectrometry (UHPLC-QTOF-MS). Overall, 30 TPs, including 4 groups of nonseparated isomeric photo TPs, were identified with various levels of confidence based on the tandem mass spectrometry information on standard compounds and the isotope-labeling method (using rac-nicotine-2',3',3'-D₃, rac-nicotine-¹³CD₃, and rac-nicotine-D₄) under air-saturated conditions. The pyrrolidine ring of nicotine was found to be the reactive site under sunlight irradiation. Pseudooxynicotine was the main primary TP from nicotine, with a maximum transformation ratio of 64%. Nicotinic acid, cotinine, 3'-hydroxycotinine, and myosmine were the final stable TPs after 72 h of solar irradiation, with yields of 13%, 3%, 5%, and 5%, respectively.